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Farago PV, Camargo GDA, Mendes MB, Semianko BC, Camilo Junior A, Dias DT, Lara LSD, Novatski A, Mendes Nadal J, Manfron J, Majumdar S, Khan IA. Computational simulation on the study of Tacrolimus and its improved dermal retention using Poly(Ԑ-caprolactone) nanocapsules. J Mol Graph Model 2024; 126:108625. [PMID: 37722352 DOI: 10.1016/j.jmgm.2023.108625] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2023] [Revised: 08/31/2023] [Accepted: 09/11/2023] [Indexed: 09/20/2023]
Abstract
Tacrolimus (TAC) is a drug from natural origin that can be used for topical application to control autoimmune skin diseases such as atopic dermatitis, psoriasis, and vitiligo. Computational simulation based on quantum mechanics theory by solving Schrödinger Equation for n-body problem may allow the theoretical calculation of drug geometry, charge distribution and dipole moment, electronic levels and molecular orbitals, electronic transitions, and vibrational transitions. Additionally, the development of novel nanotechnology-based delivery systems containing TAC can be an approach for reducing the dose applied topically, increasing dermal retention, and reducing the reported side effects due to the controlled release pattern. Firstly, this paper was devoted to obtaining the molecular, electronic, and vibrational data for TAC by using five semi-empirical (SE) methods and one Density Functional Theory (DFT) method in order to expand the knowledge about the drug properties by computational simulation. Then, this study was carried out to prepare TAC-loaded poly(ԑ-caprolactone) nanocapsules by interfacial polymer deposition following solvent displacement and investigate the in vitro drug permeation using the Franz diffusion cell and the photoacoustic spectroscopy. Computational simulations were compared in the three schemes SE/SE, SE/DFT, and DFT/DFT, where the first method represented the procedure used for geometry optimization and the second one was performed to extract electronic and vibrational properties. Computational data showed correspondence with TAC geometry description and electronic properties, with few differences in HOMO - LUMO gap (Δ) and dipole values. The SE/DFT and DFT/DFT methods presented a better drug description for the UV-Vis, Infrared, and Raman spectra with low deviation from experimental values. Franz cell model demonstrated that TAC was more delivered across the Strat-M® membrane from the solution than the drug-loaded poly(ԑ-caprolactone) nanocapsules. Photoacoustic spectroscopy assay revealed that these nanocapsules remained more retained into the Strat-M® membranes, which is desirable for the topical application.
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Affiliation(s)
- Paulo Vitor Farago
- Laboratory of Drug Development and Industrial Pharmacy, Postgraduate Program in Pharmaceutical Sciences, Department of Pharmaceutical Sciences, State University of Ponta Grossa, Ponta Grossa, PR, 84030-900, Brazil; National Center for Natural Products Research, School of Pharmacy, University of Mississippi, MS, 38677, USA.
| | - Guilherme Dos Anjos Camargo
- Laboratory of Drug Development and Industrial Pharmacy, Postgraduate Program in Pharmaceutical Sciences, Department of Pharmaceutical Sciences, State University of Ponta Grossa, Ponta Grossa, PR, 84030-900, Brazil.
| | - Matheus Benedito Mendes
- Postgraduate Program in Science (Physics), Department of Physics, State University of Ponta Grossa, Ponta Grossa, PR, 84030-900, Brazil.
| | - Betina Christi Semianko
- Academic Department of Physics, Federal University of Technology-Parana, Ponta Grossa, PR, 84017-220, Brazil.
| | - Alexandre Camilo Junior
- Postgraduate Program in Science (Physics), Department of Physics, State University of Ponta Grossa, Ponta Grossa, PR, 84030-900, Brazil.
| | - Daniele Toniolo Dias
- Academic Department of Physics, Federal University of Technology-Parana, Ponta Grossa, PR, 84017-220, Brazil.
| | - Lucas Stori de Lara
- Postgraduate Program in Science (Physics), Department of Physics, State University of Ponta Grossa, Ponta Grossa, PR, 84030-900, Brazil.
| | - Andressa Novatski
- Postgraduate Program in Science (Physics), Department of Physics, State University of Ponta Grossa, Ponta Grossa, PR, 84030-900, Brazil.
| | - Jessica Mendes Nadal
- Laboratory of Drug Development and Industrial Pharmacy, Postgraduate Program in Pharmaceutical Sciences, Department of Pharmaceutical Sciences, State University of Ponta Grossa, Ponta Grossa, PR, 84030-900, Brazil.
| | - Jane Manfron
- Laboratory of Drug Development and Industrial Pharmacy, Postgraduate Program in Pharmaceutical Sciences, Department of Pharmaceutical Sciences, State University of Ponta Grossa, Ponta Grossa, PR, 84030-900, Brazil; National Center for Natural Products Research, School of Pharmacy, University of Mississippi, MS, 38677, USA.
| | - Soumyajit Majumdar
- National Center for Natural Products Research, School of Pharmacy, University of Mississippi, MS, 38677, USA.
| | - Ikhlas A Khan
- National Center for Natural Products Research, School of Pharmacy, University of Mississippi, MS, 38677, USA.
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Fernández-Gómez D, Villegas-Moreno J, Kumar-Tiwari D, Gómez-Romero M, Juárez-Cisneros G. Effect of Multi-walled Carbon Nanotubes Functionalized with Kinetin on the Development of Avena sativa. MICROSCOPY AND MICROANALYSIS : THE OFFICIAL JOURNAL OF MICROSCOPY SOCIETY OF AMERICA, MICROBEAM ANALYSIS SOCIETY, MICROSCOPICAL SOCIETY OF CANADA 2023; 29:42-43. [PMID: 37613127 DOI: 10.1093/micmic/ozad067.017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/25/2023]
Abstract
In pioneering research, it has been documented that the CNT influences the development of plants through the balance of phytoregulators. Therefore, in this work the objective is to evaluate the effects of the CNT functionalized by non-covalent method with kinetin that have in Avena sativa. CNT was characterized by FTIR and Raman to confirm functionality. The results showed that the application of CNT with phytoregulators modified plant development.
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Affiliation(s)
- Daniela Fernández-Gómez
- Instituto de Investigaciones Químico Biológicas, Universidad Michoacana de San Nicolás de Hidalgo (UMSNH), Laboratorio de Interacción Suelo Planta Microorganismo, Ciudad Universitaria, Morelia, Michoacán, México
| | - Javier Villegas-Moreno
- Instituto de Investigaciones Químico Biológicas, Universidad Michoacana de San Nicolás de Hidalgo (UMSNH), Laboratorio de Interacción Suelo Planta Microorganismo, Ciudad Universitaria, Morelia, Michoacán, México
| | | | - Mariela Gómez-Romero
- Universidad Michoacana de San Nicolás de Hidalgo (UMSNH), Facultad de Biología, Cátedra CONACYT, Morelia, Michoacán, México
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Fernández-Gómez D, Villegas-Moreno J, Kumar-Tiwari D, Campos-García J, Juárez-Cisneros G. Effect of Multi-walled Carbon Nanotubes Functionalized with Indol-3-butyric Acid on the Development of Avena sativa. MICROSCOPY AND MICROANALYSIS : THE OFFICIAL JOURNAL OF MICROSCOPY SOCIETY OF AMERICA, MICROBEAM ANALYSIS SOCIETY, MICROSCOPICAL SOCIETY OF CANADA 2023; 29:39-41. [PMID: 37613051 DOI: 10.1093/micmic/ozad067.016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/25/2023]
Abstract
In pioneering research, it has been documented that the CNT influences the development of plants through the balance of phytoregulators. Therefore, in this work the objective is to evaluate the effects of CNT functionalized by non-covalent method with indole-3-butyric acid that they have on Avena sativa. The CNT was characterized by FTIR and Raman to confirm functionalization. It was observed that in the germination stage the seeds treated with IBA inhibited germination, however, when functionalizing the CNT with IBA it was observed that the CNT is contributing to counteract this inhibition.
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Affiliation(s)
- Daniela Fernández-Gómez
- Instituto de Investigaciones Químico Biológicas, Universidad Michoacana de San Nicolás de Hidalgo (UMSNH), Laboratorio de Interacción Suelo Planta Microorganismo, Ciudad Universitaria Morelia, Michoacán, México
| | - Javier Villegas-Moreno
- Instituto de Investigaciones Químico Biológicas, Universidad Michoacana de San Nicolás de Hidalgo (UMSNH), Laboratorio de Interacción Suelo Planta Microorganismo, Ciudad Universitaria Morelia, Michoacán, México
| | | | - Jesús Campos-García
- Instituto de Investigaciones Químico Biológicas, Universidad Michoacana de San Nicolás de Hidalgo (UMSNH), Edificio B-3, Ciudad Universitaria, Morelia, Michoacán, México
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Paul D, Sarkar U. Designing of PC
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BM based acceptors for dye‐sensitized solar cell. J PHYS ORG CHEM 2022. [DOI: 10.1002/poc.4419] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Debolina Paul
- Department of Physics Assam University Silchar India
| | - Utpal Sarkar
- Department of Physics Assam University Silchar India
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Pramanik HAR, Kharpan B, Bhattacharjee CR, Paul PC, Sarkar U, Deb J, Krishna Prasad S, Shankar Rao D. A new N 2O 2-donor compartmental Schiff base ligand and its cadmium(II) complex: synthesis, mesogenic and photoluminescent properties. INORG NANO-MET CHEM 2022. [DOI: 10.1080/24701556.2022.2068592] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
| | | | | | - Pradip C. Paul
- Department of Chemistry, Assam University, Silchar, Assam, India
| | - Utpal Sarkar
- Department of Physics, Assam University, Silchar, Assam, India
| | - Jyotirmoy Deb
- Department of Physics, Assam University, Silchar, Assam, India
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Xu S, Tan L, Liu F, Cui Y, Wang C, Zhang R. Investigation of optical properties for N- and F-doped triangular shaped carbon molecules. J Mol Model 2021; 27:154. [PMID: 33954863 DOI: 10.1007/s00894-021-04758-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2020] [Accepted: 04/18/2021] [Indexed: 10/21/2022]
Abstract
Optical properties of N- and F-doping triangular-shaped carbon molecules have been investigated in theory and experiment. The theoretical results showed that carbon molecules with impurity F and Cl have the same characters with pure carbon. Doping N into pure carbon molecule would change the optical rotation at 589 nm. For doping N replacing hydrogen atom structures (N-doping 1 and N-doping 2 molecules), the absorption spectra of them are similar to pure carbon molecule. However, for molecules with impurity N atom in benzene ring (N-doping 3 and N-doping 4 molecules), the peaks of wavelength of absorption spectra shift to long wavelength compared to that of pure carbon molecule. Moreover, the delocalization of molecular orbital (MO) is different from pure carbon molecule, which is caused by the impurity N changing the electrons distribution of benzene ring. We have calculated 3 without H and 4 without H molecules which are removing hydrogen atom in nitrogen atom from N-doping 3 and 4. 3 without H and 4 without H molecules have similar optical properties with pure carbon molecule. The results testified that the impurity N and F would not change the optical properties of carbon molecule if impurity did not change the delocalization of all benzene rings. Optical properties of nitrogen- and fluorine-doping carbon molecules investigating in theory and experiment.
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Affiliation(s)
- Shuhong Xu
- Advanced Photonics Center, School of Electronic Science and Engineering, Southeast University, Nanjing, 210096, Jiangsu, China
| | - Linfeng Tan
- Chien-Shiung Wu College, Southeast University, Nanjing, 210096, Jiangsu, China
| | - Fan Liu
- Advanced Photonics Center, School of Electronic Science and Engineering, Southeast University, Nanjing, 210096, Jiangsu, China
| | - Yiping Cui
- Advanced Photonics Center, School of Electronic Science and Engineering, Southeast University, Nanjing, 210096, Jiangsu, China
| | - Chunlei Wang
- Advanced Photonics Center, School of Electronic Science and Engineering, Southeast University, Nanjing, 210096, Jiangsu, China.
| | - Rong Zhang
- Department of Obstetrics and Gynecology, The Second Hospital of Nanjing, Nanjing University of Chinese Medicine, Nanjing, China.
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Mohammed MH, Hanoon FH. Application of zinc oxide nanosheet in various anticancer drugs delivery: Quantum chemical study. INORG CHEM COMMUN 2021. [DOI: 10.1016/j.inoche.2021.108522] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
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Speranza G. Carbon Nanomaterials: Synthesis, Functionalization and Sensing Applications. NANOMATERIALS (BASEL, SWITZERLAND) 2021; 11:967. [PMID: 33918769 PMCID: PMC8069879 DOI: 10.3390/nano11040967] [Citation(s) in RCA: 59] [Impact Index Per Article: 19.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/16/2021] [Revised: 03/16/2021] [Accepted: 03/17/2021] [Indexed: 02/07/2023]
Abstract
Recent advances in nanomaterial design and synthesis has resulted in robust sensing systems that display superior analytical performance. The use of nanomaterials within sensors has accelerated new routes and opportunities for the detection of analytes or target molecules. Among others, carbon-based sensors have reported biocompatibility, better sensitivity, better selectivity and lower limits of detection to reveal a wide range of organic and inorganic molecules. Carbon nanomaterials are among the most extensively studied materials because of their unique properties spanning from the high specific surface area, high carrier mobility, high electrical conductivity, flexibility, and optical transparency fostering their use in sensing applications. In this paper, a comprehensive review has been made to cover recent developments in the field of carbon-based nanomaterials for sensing applications. The review describes nanomaterials like fullerenes, carbon onions, carbon quantum dots, nanodiamonds, carbon nanotubes, and graphene. Synthesis of these nanostructures has been discussed along with their functionalization methods. The recent application of all these nanomaterials in sensing applications has been highlighted for the principal applicative field and the future prospects and possibilities have been outlined.
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Affiliation(s)
- Giorgio Speranza
- CMM—FBK, v. Sommarive 18, 38123 Trento, Italy;
- IFN—CNR, CSMFO Lab., via alla Cascata 56/C Povo, 38123 Trento, Italy
- Department of Industrial Engineering, University of Trento, v. Sommarive 9, 38123 Trento, Italy
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Paul D, Dua H, Sarkar U. Confinement Effects of a Noble Gas Dimer Inside a Fullerene Cage: Can It Be Used as an Acceptor in a DSSC? Front Chem 2020; 8:621. [PMID: 32850644 PMCID: PMC7424018 DOI: 10.3389/fchem.2020.00621] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2020] [Accepted: 06/15/2020] [Indexed: 02/03/2023] Open
Abstract
A detailed density functional theory investigation of He2-encapsulated fullerene C36 and C40 has been presented here. When confinement takes place, He-He bond length shortens and a non-covalent type of interaction exists between two He atoms. Energy decomposition analysis shows that though an attractive interaction exists in free He2, when it is confined inside the fullerenes, repulsive interaction is observed due to the presence of dominant repulsive energy term. Fullerene C40, with greater size, makes the incorporation of He2 much easier than C36 as confirmed from the study of boundary crossing barrier. In addition, we have studied the possibility of using He2-incorporated fullerene as acceptor material in dye-sensitized solar cell (DSSC). Based on the highest energy gap, He2@C40 and bare C40 fullerenes are chosen for this purpose. Dye constructed with He2@C40 as an acceptor has the highest light-harvesting efficiency and correspondingly will possess the maximum short circuit current as compared to pure C40 acceptor.
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Affiliation(s)
- Debolina Paul
- Department of Physics, Assam University, Silchar, India
| | - Harkishan Dua
- Department of Physics, Assam University, Silchar, India
| | - Utpal Sarkar
- Department of Physics, Assam University, Silchar, India
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Chang SJ, Bai HL, Ren FD, Luo XC, Xu JJ. Theoretical prediction of the impact sensitivities of energetic C-nitro compounds. J Mol Model 2020; 26:219. [PMID: 32728987 DOI: 10.1007/s00894-020-04481-7] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2020] [Accepted: 07/15/2020] [Indexed: 10/23/2022]
Abstract
In order to design high-energetic and insensitive explosives, the frontier orbital energy gaps, surface electrostatic potentials, nitro group charges, bond dissociation energies (BDEs) of the C-NO2 trigger bonds, and intermolecular interactions obtained by the M06-2X/6-311++G(2d,p) method were quantitatively correlated with the experimental drop hammer potential energies of 10 typical C-nitro explosives. The changes of several information-theoretic quantities (ITQs) in the density functional reactivity theory were discussed upon the formation of complexes. The BDEs in the explosives with six-membered ring are larger than those with five-membered ring. The frontier orbital energy gaps of the compounds with benzene ring are larger than those with N-heterocycle. The models involving the intermolecular interaction energies and the energy gaps could be used to predict the impact sensitivity of the C-nitro explosives, while those involving ΔSS, ΔIF, and ΔSGBP are invalid. With the more and more ITQs, the further studies are needed to seek for a good correlation between impact sensitivity measurements and ITQs for the energetic C-nitro compounds. The origin of sensitivity was revealed by the reduced density gradient method.
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Affiliation(s)
- Shuang-Jun Chang
- School of Environment and safety Engineering, North University of China, Taiyuan, 030051, China.
| | - Hai-Long Bai
- School of Environment and safety Engineering, North University of China, Taiyuan, 030051, China
| | - Fu-de Ren
- School of Chemical Engineering and Technology, North University of China, Taiyuan, 030051, China
| | - Xiang-Cheng Luo
- School of Environment and safety Engineering, North University of China, Taiyuan, 030051, China
| | - Jun-Jie Xu
- School of Environment and safety Engineering, North University of China, Taiyuan, 030051, China
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Adsorption of fluoroquinolone by carbon nanotubes: a combined experimental and density functional theory study. CHEMICAL PAPERS 2020. [DOI: 10.1007/s11696-020-01204-3] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
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Bandyopadhyay P, Karmakar A, Deb J, Sarkar U, Seikh MM. Non-covalent interactions between epinephrine and nitroaromatic compounds: A DFT study. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2020; 228:117827. [PMID: 31787535 DOI: 10.1016/j.saa.2019.117827] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/26/2019] [Revised: 11/17/2019] [Accepted: 11/18/2019] [Indexed: 06/10/2023]
Abstract
Here, we present a density functional theory (DFT) study of hydrogen bonding and π-π stacking interactions between epinephrine and different aromatic nitro-compounds in gas phase as well as in methanol solvent. Detail investigations of hydrogen bonding and π-π interactions are performed and confirmed on the basis of theoretical IR spectra, natural bond orbital (NBO) analysis, non-covalent interaction (NCI), chemical reactivity descriptors and electronic spectra. Among different functionals used for the calculation, the results obtained from ωB97XD functional are found to be more suitable to describe the hydrogen bonding and π-π stacking phenomenon for our considered systems. Weakening of hydrogen bonding and π-π stacking interaction on solvent incorporation is observed. Electronic transition between different orbitals and transition probabilities of epinephrine and nitro-aromatic complexes are described using time dependent density functional theory (TD-DFT) method.
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Affiliation(s)
- Prasanta Bandyopadhyay
- Department of Chemistry, Visva-Bharati University, Santiniketan 731235, West Bengal, India.
| | - Animesh Karmakar
- Department of Chemistry, Visva-Bharati University, Santiniketan 731235, West Bengal, India
| | - Jyotirmoy Deb
- Department of Physics, Assam University, Silchar 788011, India
| | - Utpal Sarkar
- Department of Physics, Assam University, Silchar 788011, India
| | - Md Motin Seikh
- Department of Chemistry, Visva-Bharati University, Santiniketan 731235, West Bengal, India.
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