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For: Shirak A, Grabherr M, Di Palma F, Lindblad-Toh K, Hulata G, Ron M, Kocher TD, Seroussi E. Identification of repetitive elements in the genome of Oreochromis niloticus: tilapia repeat masker. Mar Biotechnol (NY) 2010;12:121-125. [PMID: 19936833 PMCID: PMC3178446 DOI: 10.1007/s10126-009-9236-8] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/14/2009] [Accepted: 10/30/2009] [Indexed: 05/28/2023]
Number Cited by Other Article(s)
1
Zhang Y, Xia H, Peng W, Liu L, Liu L, Yang P. Application of Repetitive Sequences in Fish Cell Depletion as a Target for the CRISPR/Cas9 System. MARINE BIOTECHNOLOGY (NEW YORK, N.Y.) 2024:10.1007/s10126-024-10328-6. [PMID: 38833200 DOI: 10.1007/s10126-024-10328-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/29/2024] [Accepted: 05/27/2024] [Indexed: 06/06/2024]
2
Curzon AY, Dor L, Shirak A, Meiri-Ashkenazi I, Rosenfeld H, Ron M, Seroussi E. A novel c.1759T>G variant in follicle-stimulating hormone-receptor gene is concordant with male determination in the flathead grey mullet (Mugil cephalus). G3-GENES GENOMES GENETICS 2021;11:6046932. [PMID: 33589926 PMCID: PMC8022982 DOI: 10.1093/g3journal/jkaa044] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/26/2020] [Accepted: 12/08/2020] [Indexed: 12/31/2022]
3
Kratochwil CF, Liang Y, Urban S, Torres-Dowdall J, Meyer A. Evolutionary Dynamics of Structural Variation at a Key Locus for Color Pattern Diversification in Cichlid Fishes. Genome Biol Evol 2019;11:3452-3465. [PMID: 31821504 PMCID: PMC6916709 DOI: 10.1093/gbe/evz261] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 11/25/2019] [Indexed: 02/07/2023]  Open
4
Mapping of the Sex Determining Region on Linkage Group 12 of Guppy (Poecilia reticulata). G3-GENES GENOMES GENETICS 2019;9:3867-3875. [PMID: 31551287 PMCID: PMC6829149 DOI: 10.1534/g3.119.400656] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
5
Komissarov A, Vij S, Yurchenko A, Trifonov V, Thevasagayam N, Saju J, Sridatta PSR, Purushothaman K, Graphodatsky A, Orbán L, Kuznetsova I. B Chromosomes of the Asian Seabass (Lates calcarifer) Contribute to Genome Variations at the Level of Individuals and Populations. Genes (Basel) 2018;9:E464. [PMID: 30241368 PMCID: PMC6211105 DOI: 10.3390/genes9100464] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2018] [Revised: 09/06/2018] [Accepted: 09/12/2018] [Indexed: 12/01/2022]  Open
6
Tan TK, Tan KY, Hari R, Mohamed Yusoff A, Wong GJ, Siow CC, Mutha NVR, Rayko M, Komissarov A, Dobrynin P, Krasheninnikova K, Tamazian G, Paterson IC, Warren WC, Johnson WE, O'Brien SJ, Choo SW. PGD: a pangolin genome hub for the research community. DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION 2016;2016:baw063. [PMID: 27616775 PMCID: PMC5018392 DOI: 10.1093/database/baw063] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/24/2015] [Accepted: 04/11/2016] [Indexed: 01/01/2023]
7
Dor L, Shirak A, Rosenfeld H, Ashkenazi IM, Band MR, Korol A, Ronin Y, Seroussi E, Weller JI, Ron M. Identification of the sex-determining region in flathead grey mullet (Mugil cephalus). Anim Genet 2016;47:698-707. [PMID: 27611243 DOI: 10.1111/age.12486] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 07/04/2016] [Indexed: 11/29/2022]
8
AlMomin S, Kumar V, Al-Amad S, Al-Hussaini M, Dashti T, Al-Enezi K, Akbar A. Draft genome sequence of the silver pomfret fish, Pampus argenteus. Genome 2015;59:51-8. [PMID: 26692342 DOI: 10.1139/gen-2015-0056] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
9
Böhne A, Sengstag T, Salzburger W. Comparative transcriptomics in East African cichlids reveals sex- and species-specific expression and new candidates for sex differentiation in fishes. Genome Biol Evol 2015;6:2567-85. [PMID: 25364805 PMCID: PMC4202336 DOI: 10.1093/gbe/evu200] [Citation(s) in RCA: 46] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]  Open
10
Kuznetsova IS, Thevasagayam NM, Sridatta PSR, Komissarov AS, Saju JM, Ngoh SY, Jiang J, Shen X, Orbán L. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Front Genet 2014;5:223. [PMID: 25120555 PMCID: PMC4110674 DOI: 10.3389/fgene.2014.00223] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2014] [Accepted: 06/27/2014] [Indexed: 02/05/2023]  Open
11
Dor L, Shirak A, Gorshkov S, Band MR, Korol A, Ronin Y, Curzon A, Hulata G, Seroussi E, Ron M. Construction of a microsatellites-based linkage map for the white grouper (Epinephelus aeneus). G3 (BETHESDA, MD.) 2014;4:1455-64. [PMID: 24902605 PMCID: PMC4132176 DOI: 10.1534/g3.114.011387] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/28/2014] [Accepted: 06/01/2014] [Indexed: 02/06/2023]
12
Valente GT, Conte MA, Fantinatti BE, Cabral-de-Mello DC, Carvalho RF, Vicari MR, Kocher TD, Martins C. Origin and Evolution of B Chromosomes in the Cichlid Fish Astatotilapia latifasciata Based on Integrated Genomic Analyses. Mol Biol Evol 2014;31:2061-72. [DOI: 10.1093/molbev/msu148] [Citation(s) in RCA: 107] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]  Open
13
Fuji K, Koyama T, Kai W, Kubota S, Yoshida K, Ozaki A, Aoki JY, Kawabata Y, Araki K, Tsuzaki T, Okamoto N, Sakamoto T. Construction of a high-coverage bacterial artificial chromosome library and comprehensive genetic linkage map of yellowtail Seriola quinqueradiata. BMC Res Notes 2014;7:200. [PMID: 24684753 PMCID: PMC4230249 DOI: 10.1186/1756-0500-7-200] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2013] [Accepted: 02/26/2014] [Indexed: 11/10/2022]  Open
14
Chen GL, Chang YJ, Hsueh CH. PRAP: an ab initio software package for automated genome-wide analysis of DNA repeats for prokaryotes. Bioinformatics 2013;29:2683-9. [DOI: 10.1093/bioinformatics/btt482] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]  Open
15
Yoshida K, Terai Y, Mizoiri S, Aibara M, Nishihara H, Watanabe M, Kuroiwa A, Hirai H, Hirai Y, Matsuda Y, Okada N. B chromosomes have a functional effect on female sex determination in Lake Victoria cichlid fishes. PLoS Genet 2011;7:e1002203. [PMID: 21876673 PMCID: PMC3158035 DOI: 10.1371/journal.pgen.1002203] [Citation(s) in RCA: 110] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2011] [Accepted: 06/08/2011] [Indexed: 11/19/2022]  Open
16
Kuhl H, Tine M, Beck A, Timmermann B, Kodira C, Reinhardt R. Directed sequencing and annotation of three Dicentrarchus labrax L. chromosomes by applying Sanger- and pyrosequencing technologies on pooled DNA of comparatively mapped BAC clones. Genomics 2011;98:202-12. [PMID: 21693181 DOI: 10.1016/j.ygeno.2011.06.004] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2010] [Revised: 05/31/2011] [Accepted: 06/03/2011] [Indexed: 02/02/2023]
17
Xu P, Li J, Li Y, Cui R, Wang J, Wang J, Zhang Y, Zhao Z, Sun X. Genomic insight into the common carp (Cyprinus carpio) genome by sequencing analysis of BAC-end sequences. BMC Genomics 2011;12:188. [PMID: 21492448 PMCID: PMC3083359 DOI: 10.1186/1471-2164-12-188] [Citation(s) in RCA: 50] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2010] [Accepted: 04/14/2011] [Indexed: 12/26/2022]  Open
18
Soler L, Conte MA, Katagiri T, Howe AE, Lee BY, Amemiya C, Stuart A, Dossat C, Poulain J, Johnson J, Di Palma F, Lindblad-Toh K, Baroiller JF, D'Cotta H, Ozouf-Costaz C, Kocher TD. Comparative physical maps derived from BAC end sequences of tilapia (Oreochromis niloticus). BMC Genomics 2010;11:636. [PMID: 21080946 PMCID: PMC3018143 DOI: 10.1186/1471-2164-11-636] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2010] [Accepted: 11/16/2010] [Indexed: 01/07/2023]  Open
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