1
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Hirata S, Nogami E, Udono T. Measuring heart rate in captive chimpanzees without anesthesia. Primates 2024; 65:217-222. [PMID: 38668987 DOI: 10.1007/s10329-024-01131-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2023] [Accepted: 04/05/2024] [Indexed: 07/04/2024]
Abstract
Heart rate measurements can be useful for the monitoring of both physical and mental condition in humans and nonhuman animals. Yet, information about heart rates in chimpanzees, who are phylogenetically the closest species to humans, is scarce. Existing data on chimpanzee heart rates have mainly been collected from chimpanzees under anesthesia. To address this issue, we conducted electrocardiogram recordings in captive chimpanzees under normal conditions without anesthesia based on positive reinforcement training. We obtained a total of 771 recordings from 35 individuals (22 males and 13 females, 14-53 years old) with no cardiac problems. The females had a higher heart rate than the male chimpanzees, and heart rate decreased as a function of age. In addition, heart rate was lower in the morning and increased during the day. Overall, the mean heart rate of adult males was 86.5 beats/min, and that of female chimpanzees 106.4 beats/min. Our data could serve as a reference point for future research and health-based monitoring of chimpanzee heart rates.
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Affiliation(s)
- Satoshi Hirata
- Kumamoto Sanctuary, Wildlife Research Center, Kyoto University, 2-24 Tanaka Sekiden-cho, Sakyo, Kyoto, 606-8203, Japan.
| | - Etsuko Nogami
- Kumamoto Sanctuary, Wildlife Research Center, Kyoto University, 2-24 Tanaka Sekiden-cho, Sakyo, Kyoto, 606-8203, Japan
| | - Toshifumi Udono
- Kumamoto Sanctuary, Wildlife Research Center, Kyoto University, 2-24 Tanaka Sekiden-cho, Sakyo, Kyoto, 606-8203, Japan
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2
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Dunay E, Rukundo J, Atencia R, Cole MF, Cantwell A, Emery Thompson M, Rosati AG, Goldberg TL. Viruses in saliva from sanctuary chimpanzees (Pan troglodytes) in Republic of Congo and Uganda. PLoS One 2023; 18:e0288007. [PMID: 37384730 PMCID: PMC10310015 DOI: 10.1371/journal.pone.0288007] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2023] [Accepted: 06/16/2023] [Indexed: 07/01/2023] Open
Abstract
Pathogen surveillance for great ape health monitoring has typically been performed on non-invasive samples, primarily feces, in wild apes and blood in sanctuary-housed apes. However, many important primate pathogens, including known zoonoses, are shed in saliva and transmitted via oral fluids. Using metagenomic methods, we identified viruses in saliva samples from 46 wild-born, sanctuary-housed chimpanzees at two African sanctuaries in Republic of Congo and Uganda. In total, we identified 20 viruses. All but one, an unclassified CRESS DNA virus, are classified in five families: Circoviridae, Herpesviridae, Papillomaviridae, Picobirnaviridae, and Retroviridae. Overall, viral prevalence ranged from 4.2% to 87.5%. Many of these viruses are ubiquitous in primates and known to replicate in the oral cavity (simian foamy viruses, Retroviridae; a cytomegalovirus and lymphocryptovirus; Herpesviridae; and alpha and gamma papillomaviruses, Papillomaviridae). None of the viruses identified have been shown to cause disease in chimpanzees or, to our knowledge, in humans. These data suggest that the risk of zoonotic viral disease from chimpanzee oral fluids in sanctuaries may be lower than commonly assumed.
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Affiliation(s)
- Emily Dunay
- Department of Pathobiological Sciences, School of Veterinary Medicine, University of Wisconsin-Madison, Madison, Wisconsin, United States of America
| | - Joshua Rukundo
- Ngamba Island Chimpanzee Sanctuary / Chimpanzee Trust, Entebbe, Uganda
| | - Rebeca Atencia
- Jane Goodall Institute Congo, Pointe-Noire, Republic of Congo
| | - Megan F. Cole
- Department of Anthropology, University of New Mexico, Albuquerque, New Mexico, United States of America
| | - Averill Cantwell
- Department of Psychology, University of Michigan, Ann Arbor, Michigan, United States of America
| | - Melissa Emery Thompson
- Department of Anthropology, University of New Mexico, Albuquerque, New Mexico, United States of America
| | - Alexandra G. Rosati
- Department of Psychology, University of Michigan, Ann Arbor, Michigan, United States of America
- Department of Anthropology, University of Michigan, Ann Arbor, Michigan, United States of America
| | - Tony L. Goldberg
- Department of Pathobiological Sciences, School of Veterinary Medicine, University of Wisconsin-Madison, Madison, Wisconsin, United States of America
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3
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Characterization of sinoatrial automaticity in Microcebus murinus to study the effect of aging on cardiac activity and the correlation with longevity. Sci Rep 2023; 13:3054. [PMID: 36810863 PMCID: PMC9944915 DOI: 10.1038/s41598-023-29723-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2022] [Accepted: 02/09/2023] [Indexed: 02/24/2023] Open
Abstract
Microcebus murinus, or gray mouse lemur (GML), is one of the smallest primates known, with a size in between mice and rats. The small size, genetic proximity to humans and prolonged senescence, make this lemur an emerging model for neurodegenerative diseases. For the same reasons, it could help understand how aging affects cardiac activity. Here, we provide the first characterization of sinoatrial (SAN) pacemaker activity and of the effect of aging on GML heart rate (HR). According to GML size, its heartbeat and intrinsic pacemaker frequencies lie in between those of mice and rats. To sustain this fast automaticity the GML SAN expresses funny and Ca2+ currents (If, ICa,L and ICa,T) at densities similar to that of small rodents. SAN automaticity was also responsive to β-adrenergic and cholinergic pharmacological stimulation, showing a consequent shift in the localization of the origin of pacemaker activity. We found that aging causes decrease of basal HR and atrial remodeling in GML. We also estimated that, over 12 years of a lifetime, GML generates about 3 billion heartbeats, thus, as many as humans and three times more than rodents of equivalent size. In addition, we estimated that the high number of heartbeats per lifetime is a characteristic that distinguishes primates from rodents or other eutherian mammals, independently from body size. Thus, cardiac endurance could contribute to the exceptional longevity of GML and other primates, suggesting that GML's heart sustains a workload comparable to that of humans in a lifetime. In conclusion, despite the fast HR, GML replicates some of the cardiac deficiencies reported in old people, providing a suitable model to study heart rhythm impairment in aging. Moreover, we estimated that, along with humans and other primates, GML presents a remarkable cardiac longevity, enabling longer life span than other mammals of equivalent size.
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4
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Lonsdorf EV, Travis DA, Raphael J, Kamenya S, Lipende I, Mwacha D, Collins DA, Wilson M, Mjungu D, Murray C, Bakuza J, Wolf TM, Parsons MB, Deere JR, Lantz E, Kinsel MJ, Santymire R, Pintea L, Terio KA, Hahn BH, Pusey AE, Goodall J, Gillespie TR. The Gombe Ecosystem Health Project: 16 years of program evolution and lessons learned. Am J Primatol 2021; 84:e23300. [PMID: 34223656 PMCID: PMC8727649 DOI: 10.1002/ajp.23300] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2020] [Revised: 06/01/2021] [Accepted: 06/15/2021] [Indexed: 12/30/2022]
Abstract
Infectious disease outbreaks pose a significant threat to the conservation of chimpanzees (Pan troglodytes) and all threatened nonhuman primates. Characterizing and mitigating these threats to support the sustainability and welfare of wild populations is of the highest priority. In an attempt to understand and mitigate the risk of disease for the chimpanzees of Gombe National Park, Tanzania, we initiated a long-term health-monitoring program in 2004. While the initial focus was to expand the ongoing behavioral research on chimpanzees to include standardized data on clinical signs of health, it soon became evident that the scope of the project would ideally include diagnostic surveillance of pathogens for all primates (including people) and domestic animals, both within and surrounding the National Park. Integration of these data, along with in-depth post-mortem examinations, have allowed us to establish baseline health indicators to inform outbreak response. Here, we describe the development and expansion of the Gombe Ecosystem Health project, review major findings from the research and summarize the challenges and lessons learned over the past 16 years. We also highlight future directions and present the opportunities and challenges that remain when implementing studies of ecosystem health in a complex, multispecies environment.
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Affiliation(s)
- Elizabeth V Lonsdorf
- Department of Psychology and Biological Foundations of Behavior Program, Franklin & Marshall College, Lancaster, Pennsylvania, USA
| | - Dominic A Travis
- Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, Minnesota, USA
| | - Jane Raphael
- Gombe National Park, Tanzania Nationals Park, Kigoma, Tanzania
| | - Shadrack Kamenya
- Gombe Stream Research Center, The Jane Goodall Institute, Kigoma, Tanzania
| | - Iddi Lipende
- Tanzania Wildlife Research Institute, Arusha, Tanzania
| | - Dismas Mwacha
- Gombe Stream Research Center, The Jane Goodall Institute, Kigoma, Tanzania
| | - D Anthony Collins
- Gombe Stream Research Center, The Jane Goodall Institute, Kigoma, Tanzania
| | - Michael Wilson
- Departments of Anthropology and Ecology, Evolution and Behavior, University of Minnesota, St. Paul, Minnesota, USA
| | - Deus Mjungu
- Gombe Stream Research Center, The Jane Goodall Institute, Kigoma, Tanzania
| | - Carson Murray
- Center for the Advanced Study of Human Paleobiology, George Washington University, Washington, District of Columbia, USA
| | - Jared Bakuza
- College of Education, University of Dar es Salaam, Dar es Salaam, Tanzania
| | - Tiffany M Wolf
- Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, Minnesota, USA
| | - Michele B Parsons
- Division of Global Health, Centers for Disease Control and Prevention, Atlanta, Georgia, USA
| | - Jessica R Deere
- Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, Minnesota, USA
| | - Emma Lantz
- California Department of Fish and Wildlife, Rancho Cordova, California, USA
| | - Michael J Kinsel
- Zoological Pathology Program, University of Illinois, Brookfield, Illinois, USA
| | - Rachel Santymire
- Davee Center for Epidemiology and Endocrinology, Lincoln Park Zoo, Chicago, Illinois, USA
| | | | - Karen A Terio
- Zoological Pathology Program, University of Illinois, Brookfield, Illinois, USA
| | - Beatrice H Hahn
- Departments of Medicine and Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA
| | - Anne E Pusey
- Department of Evolutionary Anthropology, Duke University, Durham, North Carolina, USA
| | - Jane Goodall
- The Jane Goodall Institute, Vienna, Virginia, USA
| | - Thomas R Gillespie
- Departments of Environmental Sciences and Environmental Health and Program in Population Biology, Emory University, Atlanta, Georgia, USA
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ANESTHESIA WITH MEDETOMIDINE-KETAMINE AND DEXMEDETOMIDINE-KETAMINE IN MOUNTAIN GORILLAS ( GORILLA BERINGEI BERINGEI). J Zoo Wildl Med 2021; 51:507-513. [PMID: 33480526 DOI: 10.1638/2018-0212] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 04/14/2020] [Indexed: 11/21/2022] Open
Abstract
Between December 2002 and September 2017, 125 anesthetic procedures involving free-living and orphaned captive mountain gorillas (Gorilla beringei beringei) were performed in the Virunga Massif and Bwindi Impenetrable Forest in East-Central Africa. Of these 125 immobilizations, 114 records were complete enough for inclusion into this study. Anesthetic and physiologic data from these 114 cases were analyzed, of which 57 used medetomidine-ketamine and 57 used dexmedetomidine-ketamine administered intramuscularly. With the use of estimated weights, the mean induction dosage (mg/kg ± SD) for medetomidine was 0.033 ± 0.003 (n = 42), for dexmedetomidine 0.018 ± 0.005 (n = 53), and for ketamine 3.66 ± 0.95 (n = 95). Mean time from injection of induction dose to recumbency was 6.8 ± 3.1 min (n = 74). Atipamezole was administered intramuscularly to reverse anesthesia. First signs of recovery occurred at 5.0 ± 4.0 min, and full recovery was 19.0 ± 17.0 min after administration of the reversal agent. No significant differences in physiologic parameters or anesthetic time variables were noted between healthy and unhealthy individuals. Mean heart rate was 72.0 ± 17.6 beats/min (n = 83) and mean oxygen saturation was 96.5% ± 4.2 (n = 62). Mean respiratory rate was 27 ± 9 breaths/min (n = 84) and mean body temperature 36.6°C ± 1.2 (n = 61). The current protocol has several advantages for field use in this species given its quick induction, few observed side effects, and ability to reverse so that the animal can return more quickly to its social group.
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6
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Wilson ML, Lonsdorf EV, Mjungu DC, Kamenya S, Kimaro EW, Collins DA, Gillespie TR, Travis DA, Lipende I, Mwacha D, Ndimuligo SA, Pintea L, Raphael J, Mtiti ER, Hahn BH, Pusey AE, Goodall J. Research and Conservation in the Greater Gombe Ecosystem: Challenges and Opportunities. BIOLOGICAL CONSERVATION 2020; 252:108853. [PMID: 33343005 PMCID: PMC7743041 DOI: 10.1016/j.biocon.2020.108853] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
The study of chimpanzees in Gombe National Park, Tanzania, started by Jane Goodall in 1960, provided pioneering accounts of chimpanzee behavior and ecology. With funding from multiple sources, including the Jane Goodall Institute (JGI) and grants from private foundations and federal programs, the project has continued for sixty years, providing a wealth of information about our evolutionary cousins. These chimpanzees face two main challenges to their survival: infectious disease - including simian immunodeficiency virus (SIVcpz), which can cause Acquired Immune Deficiency Syndrome (AIDS) in chimpanzees - and the deforestation of land outside the park. A health monitoring program has increased understanding of the pathogens affecting chimpanzees and has promoted measures to characterize and reduce disease risk. Deforestation reduces connections between Gombe and other chimpanzee populations, which can cause loss of genetic diversity. To promote habitat restoration, JGI facilitated participatory village land use planning, in which communities voluntarily allocated land to a network of Village Land Forest Reserves. Expected benefits to people include stabilizing watersheds, improving water supplies, and ensuring a supply of forest resources. Surveys and genetic analyses confirm that chimpanzees persist on village lands and remain connected to the Gombe population. Many challenges remain, but the regeneration of natural forest on previously degraded lands provides hope that conservation solutions can be found that benefit both people and wildlife. Conservation work in the Greater Gombe Ecosystem has helped promote broader efforts to plan and work for conservation elsewhere in Tanzania and across Africa.
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Affiliation(s)
- Michael L. Wilson
- Department of Anthropology, University of Minnesota, Minneapolis, MN 55455 USA
- Department of Ecology, Evolution, and Behavior, University of Minnesota, St. Paul, MN 55108 USA
- Institute on the Environment, University of Minnesota, St. Paul, MN 55108 USA
| | | | - Deus C. Mjungu
- Gombe Stream Research Centre, the Jane Goodall Institute – Tanzania, Kigoma, Tanzania
| | - Shadrack Kamenya
- Gombe Stream Research Centre, the Jane Goodall Institute – Tanzania, Kigoma, Tanzania
| | - Elihuruma Wilson Kimaro
- Department of Ecology, Evolution, and Behavior, University of Minnesota, St. Paul, MN 55108 USA
- Gombe National Park, Kigoma, Tanzania
| | - D. Anthony Collins
- Gombe Stream Research Centre, the Jane Goodall Institute – Tanzania, Kigoma, Tanzania
| | - Thomas R. Gillespie
- Department of Environmental Sciences, Emory University, Atlanta, Georgia 30322 USA
- Department of Environmental Health, Rollins School of Public Health, Emory University, Atlanta, Georgia 30322 USA
- Program in Population, Biology, Ecology and Evolution, Emory University, Atlanta, Georgia 30322 USA
| | - Dominic A. Travis
- College of Veterinary Medicine, University of Minnesota, St. Paul, MN, 55108 USA
| | - Iddi Lipende
- Tanzania Wildlife Research Institute (TAWIRI), Arusha, Tanzania
| | - Dismas Mwacha
- Gombe Stream Research Centre, the Jane Goodall Institute – Tanzania, Kigoma, Tanzania
| | - Sood A. Ndimuligo
- Centre for Ecological and Evolutionary Synthesis (CEES), Department of Biosciences, University of Oslo, Norway
| | | | | | | | - Beatrice H. Hahn
- Department of Medicine, University of Pennsylvania, Philadelphia, 19104, USA
- Department of Microbiology, University of Pennsylvania, Philadelphia, 19104, USA
| | - Anne E. Pusey
- Department of Evolutionary Anthropology, Duke University, Durham, NC 27708 USA
| | - Jane Goodall
- The Jane Goodall Institute, Vienna, VA, 22182 USA
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7
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Wilson ML, Lonsdorf EV, Mjungu DC, Kamenya S, Kimaro EW, Collins DA, Gillespie TR, Travis DA, Lipende I, Mwacha D, Ndimuligo SA, Pintea L, Raphael J, Mtiti ER, Hahn BH, Pusey AE, Goodall J. Research and Conservation in the Greater Gombe Ecosystem: Challenges and Opportunities. BIOLOGICAL CONSERVATION 2020; 252:108853. [PMID: 33343005 DOI: 10.1016/j.biocon.2020.108731] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
The study of chimpanzees in Gombe National Park, Tanzania, started by Jane Goodall in 1960, provided pioneering accounts of chimpanzee behavior and ecology. With funding from multiple sources, including the Jane Goodall Institute (JGI) and grants from private foundations and federal programs, the project has continued for sixty years, providing a wealth of information about our evolutionary cousins. These chimpanzees face two main challenges to their survival: infectious disease - including simian immunodeficiency virus (SIVcpz), which can cause Acquired Immune Deficiency Syndrome (AIDS) in chimpanzees - and the deforestation of land outside the park. A health monitoring program has increased understanding of the pathogens affecting chimpanzees and has promoted measures to characterize and reduce disease risk. Deforestation reduces connections between Gombe and other chimpanzee populations, which can cause loss of genetic diversity. To promote habitat restoration, JGI facilitated participatory village land use planning, in which communities voluntarily allocated land to a network of Village Land Forest Reserves. Expected benefits to people include stabilizing watersheds, improving water supplies, and ensuring a supply of forest resources. Surveys and genetic analyses confirm that chimpanzees persist on village lands and remain connected to the Gombe population. Many challenges remain, but the regeneration of natural forest on previously degraded lands provides hope that conservation solutions can be found that benefit both people and wildlife. Conservation work in the Greater Gombe Ecosystem has helped promote broader efforts to plan and work for conservation elsewhere in Tanzania and across Africa.
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Affiliation(s)
- Michael L Wilson
- Department of Anthropology, University of Minnesota, Minneapolis, MN 55455 USA
- Department of Ecology, Evolution, and Behavior, University of Minnesota, St. Paul, MN 55108 USA
- Institute on the Environment, University of Minnesota, St. Paul, MN 55108 USA
| | - Elizabeth V Lonsdorf
- Department of Psychology, Franklin and Marshall College, Lancaster, PA 17604 USA
| | - Deus C Mjungu
- Gombe Stream Research Centre, the Jane Goodall Institute - Tanzania, Kigoma, Tanzania
| | - Shadrack Kamenya
- Gombe Stream Research Centre, the Jane Goodall Institute - Tanzania, Kigoma, Tanzania
| | - Elihuruma Wilson Kimaro
- Department of Ecology, Evolution, and Behavior, University of Minnesota, St. Paul, MN 55108 USA
- Gombe National Park, Kigoma, Tanzania
| | - D Anthony Collins
- Gombe Stream Research Centre, the Jane Goodall Institute - Tanzania, Kigoma, Tanzania
| | - Thomas R Gillespie
- Department of Environmental Sciences, Emory University, Atlanta, Georgia 30322 USA
- Department of Environmental Health, Rollins School of Public Health, Emory University, Atlanta, Georgia 30322 USA
- Program in Population, Biology, Ecology and Evolution, Emory University, Atlanta, Georgia 30322 USA
| | - Dominic A Travis
- College of Veterinary Medicine, University of Minnesota, St. Paul, MN, 55108 USA
| | - Iddi Lipende
- Tanzania Wildlife Research Institute (TAWIRI), Arusha, Tanzania
| | - Dismas Mwacha
- Gombe Stream Research Centre, the Jane Goodall Institute - Tanzania, Kigoma, Tanzania
| | - Sood A Ndimuligo
- Centre for Ecological and Evolutionary Synthesis (CEES), Department of Biosciences, University of Oslo, Norway
| | | | | | | | - Beatrice H Hahn
- Department of Medicine, University of Pennsylvania, Philadelphia, 19104, USA
- Department of Microbiology, University of Pennsylvania, Philadelphia, 19104, USA
| | - Anne E Pusey
- Department of Evolutionary Anthropology, Duke University, Durham, NC 27708 USA
| | - Jane Goodall
- The Jane Goodall Institute, Vienna, VA, 22182 USA
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8
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Travis DA, Lonsorf EV, Gillespie TR. The grand challenge of great ape health and conservation in the anthropocene. Am J Primatol 2017; 80. [PMID: 29095520 DOI: 10.1002/ajp.22717] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2017] [Accepted: 09/25/2017] [Indexed: 11/07/2022]
Abstract
"Ecosystem Health recognizes the inherent interdependence of the health of humans, animals and ecosystems and explores the perspectives, theories and methodologies emerging at the interface between ecological and health sciences." This broad focus requires new approaches and methods for solving problems of greater complexity at larger scales than ever before. Nowhere is this point more salient than the case of disease emergence and control at the human-non human primate interface in shrinking tropical forests under great anthropogenic pressure. This special edition brings together transdisciplinary experts who have created successful partnerships leading to advances in ecosystem approaches to health for wild ape populations with relevance to all developing country tropical forest environments. It is no coincidence that the advances herein highlight two long term health projects-the Gombe Ecosystem Health Project (Gombe National Park, Tanzania), and the Taï Chimpanzee Project (TCP) in Côte d'Ivoire-since standardizing and validating noninvasive disease surveillance, risk assessment and management methods presents a special series of challenges where time is a major factor. Advances highlighted in this addition include: health surveillance and monitoring, health risk analysis, field immobilization and interventions, human-NHP networks/interfaces, diagnostic tool development, and cutting edge molecular and genetic techniques.
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Affiliation(s)
- Dominic A Travis
- Gombe Ecosystem Health Project, Gombe National Park, Kigoma, Tanzania.,Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, Minnesota
| | - Elizabeth V Lonsorf
- Gombe Ecosystem Health Project, Gombe National Park, Kigoma, Tanzania.,Department of Psychology, Franklin and Marshall College, Lancaster, Pennsylvania
| | - Thomas R Gillespie
- Gombe Ecosystem Health Project, Gombe National Park, Kigoma, Tanzania.,Department of Environmental Sciences and Program in Population Biology, Ecology and Evolution, Emory University, Atlanta, Georgia.,Department of Environmental Health, Rollins School of Public Health, Emory University, Atlanta, Georgia
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9
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Barbian HJ, Li Y, Ramirez M, Klase Z, Lipende I, Mjungu D, Moeller AH, Wilson ML, Pusey AE, Lonsdorf EV, Bushman FD, Hahn BH. Destabilization of the gut microbiome marks the end-stage of simian immunodeficiency virus infection in wild chimpanzees. Am J Primatol 2015; 80. [PMID: 26676710 DOI: 10.1002/ajp.22515] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2015] [Revised: 10/20/2015] [Accepted: 12/01/2015] [Indexed: 12/17/2022]
Abstract
Enteric dysbiosis is a characteristic feature of progressive human immunodeficiency virus type 1 (HIV-1) infection but has not been observed in simian immunodeficiency virus (SIVmac)-infected macaques, including in animals with end-stage disease. This has raised questions concerning the mechanisms underlying the HIV-1 associated enteropathy, with factors other than virus infection, such as lifestyle and antibiotic use, implicated as playing possible causal roles. Simian immunodeficiency virus of chimpanzees (SIVcpz) is also associated with increased mortality in wild-living communities, and like HIV-1 and SIVmac, can cause CD4+ T cell depletion and immunodeficiency in infected individuals. Given the central role of the intestinal microbiome in mammalian health, we asked whether gut microbial constituents could be identified that are indicative of SIVcpz status and/or disease progression. Here, we characterized the gut microbiome of SIVcpz-infected and -uninfected chimpanzees in Gombe National Park, Tanzania. Subjecting a small number of fecal samples (N = 9) to metagenomic (shotgun) sequencing, we found bacteria of the family Prevotellaceae to be enriched in SIVcpz-infected chimpanzees. However, 16S rRNA gene sequencing of a larger number of samples (N = 123) failed to show significant differences in both the composition and diversity (alpha and beta) of gut bacterial communities between infected (N = 24) and uninfected (N = 26) chimpanzees. Similarly, chimpanzee stool-associated circular virus (Chi-SCV) and chimpanzee adenovirus (ChAdV) identified by metagenomic sequencing were neither more prevalent nor more abundant in SIVcpz-infected individuals. However, fecal samples collected from SIVcpz-infected chimpanzees within 5 months before their AIDS-related death exhibited significant compositional changes in their gut bacteriome. These data indicate that SIVcpz-infected chimpanzees retain a stable gut microbiome throughout much of their natural infection course, with a significant destabilization of bacterial (but not viral) communities observed only in individuals with known immunodeficiency within the last several months before their death. Am. J. Primatol. 80:e22515, 2018. © 2015 Wiley Periodicals, Inc.
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Affiliation(s)
- Hannah J Barbian
- Department of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.,Department of Microbiology, University of Pennsylvania, Philadelphia, Pennsylvania
| | - Yingying Li
- Department of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.,Department of Microbiology, University of Pennsylvania, Philadelphia, Pennsylvania
| | - Miguel Ramirez
- Department of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania
| | - Zachary Klase
- Department of Biological Sciences, University of the Sciences, Philadelphia, Pennsylvania
| | | | - Deus Mjungu
- Gombe Stream Research Center, Kigoma, Tanzania
| | - Andrew H Moeller
- Department of Integrative Biology, University of California, Berkeley, California.,Miller Institute for Basic Research, University of California, Berkeley, California
| | - Michael L Wilson
- Department of Anthropology, University of Minnesota, Minneapolis, Minnesota.,Department of Ecology, Evolution and Behavior, University of Minnesota, St. Paul, Minnesota
| | - Anne E Pusey
- Department of Evolutionary Anthropology, Duke University, Durham, North Carolina
| | - Elizabeth V Lonsdorf
- Department of Psychology, Franklin and Marshall College, Lancaster, Pennsylvania
| | - Frederic D Bushman
- Department of Microbiology, University of Pennsylvania, Philadelphia, Pennsylvania
| | - Beatrice H Hahn
- Department of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.,Department of Microbiology, University of Pennsylvania, Philadelphia, Pennsylvania
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10
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Hoppe E, Pauly M, Robbins M, Gray M, Kujirakwinja D, Nishuli R, Boji Mungu-Akonkwa DD, Leendertz FH, Ehlers B. Phylogenomic evidence for recombination of adenoviruses in wild gorillas. J Gen Virol 2015. [DOI: 10.1099/jgv.0.000250] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023] Open
Affiliation(s)
- Eileen Hoppe
- Division 12 ‘Measles, Mumps, Rubella and Viruses affecting immunocompromised patients’, Robert Koch Institute, 13353 Berlin, Germany
| | - Maude Pauly
- Division 12 ‘Measles, Mumps, Rubella and Viruses affecting immunocompromised patients’, Robert Koch Institute, 13353 Berlin, Germany
- P3 ‘Epidemiology of highly pathogenic microorganisms’, Robert Koch Institute, 13353 Berlin, Germany
| | - Martha Robbins
- Department of Primatology, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany
| | - Maryke Gray
- Department of Environmental Health, Rollins School of Public Health, Emory University, Atlanta, GA, USA
| | - Deo Kujirakwinja
- Wildlife Conservation Society, Grauer's Gorilla Project, Democratic Republic of the Congo
| | - Radar Nishuli
- Institut Congolais pour la Conservation de la Nature, Democratic Republic of the Congo
| | | | - Fabian H. Leendertz
- P3 ‘Epidemiology of highly pathogenic microorganisms’, Robert Koch Institute, 13353 Berlin, Germany
| | - Bernhard Ehlers
- Division 12 ‘Measles, Mumps, Rubella and Viruses affecting immunocompromised patients’, Robert Koch Institute, 13353 Berlin, Germany
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