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Mukhopadhyay J, Wai A, Hausner G. The mitogenomes of Leptographium aureum, Leptographium sp., and Grosmannia fruticeta: expansion by introns. Front Microbiol 2023; 14:1240407. [PMID: 37637121 PMCID: PMC10448965 DOI: 10.3389/fmicb.2023.1240407] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2023] [Accepted: 07/26/2023] [Indexed: 08/29/2023] Open
Abstract
Introduction Many members of the Ophiostomatales are of economic importance as they are bark-beetle associates and causative agents for blue stain on timber and in some instances contribute towards tree mortality. The taxonomy of these fungi has been challenging due to the convergent evolution of many traits associated with insect dispersal and a limited number of morphological characters that happen to be highly pleomorphic. This study examines the mitochondrial genomes for three members of Leptographium sensu lato [Leptographium aureum (also known as Grosmannia aurea), Grosmannia fruticeta (also known as Leptographium fruticetum), and Leptographium sp. WIN(M)1376)]. Methods Illumina sequencing combined with gene and intron annotations and phylogenetic analysis were performed. Results Sequence analysis showed that gene content and gene synteny are conserved but mitochondrial genome sizes were variable: G. fruticeta at 63,821 bp, Leptographium sp. WIN(M)1376 at 81,823 bp and L. aureum at 104,547 bp. The variation in size is due to the number of introns and intron-associated open reading frames. Phylogenetic analysis of currently available mitochondrial genomes for members of the Ophiostomatales supports currently accepted generic arrangements within this order and specifically supports the separation of members with Leptographium-like conidiophores into two genera, with L. aureum grouping with Leptographium and G. fruticeta aligning with Grosmannia. Discussion Mitochondrial genomes are promising sequences for resolving evolutionary relationships within the Ophiostomatales.
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Affiliation(s)
| | | | - Georg Hausner
- Department of Microbiology, University of Manitoba, Winnipeg, MB, Canada
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Bilański P, Jankowiak R, Solheim H, Fortuna P, Chyrzyński Ł, Warzecha P, Taerum SJ. Soil-borne Ophiostomatales species (Sordariomycetes, Ascomycota) in beech, oak, pine, and spruce stands in Poland with descriptions of Sporothrixroztoczensis sp. nov., S.silvicola sp. nov., and S.tumida sp. nov. MycoKeys 2023; 97:41-69. [PMID: 37251288 PMCID: PMC10210257 DOI: 10.3897/mycokeys.97.97416] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2022] [Accepted: 04/19/2023] [Indexed: 05/31/2023] Open
Abstract
Ophiostomatales (Ascomycota) contains many species, most of which are associated with bark beetles. Some members of this order are plant or animal pathogens, while others colonize soil, different plant tissues, or even carpophores of some Basidiomycota. However, little is known about soil-inhabiting Ophiostomatales fungi. A survey of these fungi associated with soil under beech, oak, pine, and spruce stands in Poland yielded 623 isolates, representing 10 species: Heinzbutiniagrandicarpa, Leptographiumprocerum, L.radiaticola, Ophiostomapiliferum, O.quercus, Sporothrixbrunneoviolacea, S.dentifunda, S.eucastaneae, and two newly described taxa, namely Sporothrixroztoczensissp. nov. and S.silvicolasp. nov. In addition, isolates collected from fallen shoots of Pinussylvestris that were pruned by Tomicus sp. are described as Sporothrixtumidasp. nov. The new taxa were morphologically characterized and phylogenetically analyzed based on multi-loci sequence data (ITS, β-tubulin, calmodulin, and translation elongation factor 1-α genes). The Ophiostomatales species were especially abundant in soil under pine and oak stands. Leptographiumprocerum, S.silvicola, and S.roztoczensis were the most frequently isolated species from soil under pine stands, while S.brunneoviolacea was the most abundant in soil under oak stands. The results highlight that forest soil in Poland has a wide diversity of Ophiostomatales taxa, but further studies are required to uncover the molecular diversity and phylogenetic relationships of these fungi, as well as their roles in soil fungal communities.
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Affiliation(s)
- Piotr Bilański
- Department of Forest Ecosystems Protection, University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425 Krakow, PolandUniversity of Agriculture in KrakowKrakowPoland
| | - Robert Jankowiak
- Department of Forest Ecosystems Protection, University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425 Krakow, PolandUniversity of Agriculture in KrakowKrakowPoland
| | - Halvor Solheim
- Norwegian Institute of Bioeconomy Research, P.O. Box 115, 1431, Ås, NorwayNorwegian Institute of Bioeconomy ResearchÅsNorway
| | - Paweł Fortuna
- Department of Forest Ecosystems Protection, University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425 Krakow, PolandUniversity of Agriculture in KrakowKrakowPoland
| | - Łukasz Chyrzyński
- Department of Forest Ecosystems Protection, University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425 Krakow, PolandUniversity of Agriculture in KrakowKrakowPoland
| | - Paulina Warzecha
- Department of Forest Ecosystems Protection, University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425 Krakow, PolandUniversity of Agriculture in KrakowKrakowPoland
| | - Stephen Joshua Taerum
- The Connecticut Agricultural Experiment Station, Department of Plant Pathology and Ecology, Jenkins-Waggoner Laboratory, 123 Huntington Street P.O. Box 1106, New Haven, CT 06504-1106, USAThe Connecticut Agricultural Experiment Station, Department of Plant Pathology and Ecology, Jenkins-Waggoner LaboratoryNew HavenUnited States of America
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Strzałka B, Jankowiak R, Bilański P, Patel N, Hausner G, Linnakoski R, Solheim H. Two new species of Ophiostomatales (Sordariomycetes) associated with the bark beetle Dryocoetes alni from Poland. MycoKeys 2020; 68:23-48. [PMID: 32607057 PMCID: PMC7314864 DOI: 10.3897/mycokeys.68.50035] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2020] [Accepted: 04/26/2020] [Indexed: 11/12/2022] Open
Abstract
Bark beetles belonging to the genus Dryocoetes (Coleoptera, Curculionidae, Scolytinae) are known vectors of fungi, such as the pathogenic species Grosmannia dryocoetidis involved in alpine fir (Abies lasiocarpa) mortality. Associations between hardwood-infesting Dryocoetes species and fungi in Europe have received very little research attention. Ectosymbiotic fungi residing in Ceratocystiopsis and Leptographium (Ophiostomatales, Sordariomycetes, Ascomycota) were commonly detected in previous surveys of the Dryocoetes alni-associated mycobiome in Poland. The aim of this study was to accurately identify these isolates and to provide descriptions of the new species. The identification was conducted based on morphology and DNA sequence data for six loci (ITS1-5.8S, ITS2-28S, ACT, CAL, TUB2, and TEF1-α). This revealed two new species, described here as Ceratocystiopsis synnemata sp. nov. and Leptographium alneum sp. nov. The host trees for the new species included Alnus incana and Populus tremula. Ceratocystiopsis synnemata can be distinguished from its closely related species, C. pallidobrunnea, based on conidia morphology and conidiophores that aggregate in loosely arranged synnemata. Leptographium alneum is closely related to Grosmannia crassivaginata and differs from this species in having a larger ascomatal neck, and the presence of larger club-shaped cells.
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Affiliation(s)
- Beata Strzałka
- Department of Forest Ecosystems Protection; University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425, Krakow, Poland University of Agriculture Kraków Poland
| | - Robert Jankowiak
- Department of Forest Ecosystems Protection; University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425, Krakow, Poland University of Agriculture Kraków Poland
| | - Piotr Bilański
- Department of Forest Ecosystems Protection; University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425, Krakow, Poland University of Agriculture Kraków Poland
| | - Nikita Patel
- Department of Microbiology, Buller Building 213, University of Manitoba, Winnipeg, R3T 2N2, Canada University of Manitoba Winnipeg Canada
| | - Georg Hausner
- Department of Microbiology, Buller Building 213, University of Manitoba, Winnipeg, R3T 2N2, Canada University of Manitoba Winnipeg Canada
| | - Riikka Linnakoski
- Natural Resources Institute Finland (Luke), Latokartanonkaari 9, 00790, Helsinki, Finland Natural Resources Institute Finland Helsinki Finland
| | - Halvor Solheim
- Norwegian Institute of Bioeconomy Research, P.O. Box 115, 1431, Ås, Norway Norwegian Institute of Bioeconomy Research Ås Norway
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Jankowiak R, Bilański P, Strzałka B, Linnakoski R, Bosak A, Hausner G. Four new Ophiostoma species associated with conifer- and hardwood-infesting bark and ambrosia beetles from the Czech Republic and Poland. Antonie Van Leeuwenhoek 2019; 112:1501-1521. [PMID: 31140027 PMCID: PMC6748885 DOI: 10.1007/s10482-019-01277-5] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2018] [Accepted: 05/14/2019] [Indexed: 12/24/2022]
Abstract
Fungi under the order Ophiostomatales (Ascomycota) are known to associate with various species of bark beetles (Coleoptera: Curculionidae: Scolytinae). In addition this group of fungi contains many taxa that can impart blue-stain on sapwood and some are important tree pathogens. A recent survey that focussed on the diversity of the Ophiostomatales in the forest ecosystems of the Czech Republic and Poland uncovered four putative new species. Phylogenetic analyses of four gene regions (ITS1-5.8S-ITS2 region, ß-tubulin, calmodulin, and translation elongation factor 1-α) indicated that these four species are members of the genus Ophiostoma. All four newly described species can be distinguished from each other and from closely related species based on DNA sequence comparisons, morphological characters, growth rates, and their insect associations. Based on this study four new taxa can be circumscribed and the following names are provided: Ophiostoma pityokteinis sp. nov., Ophiostoma rufum sp. nov., Ophiostoma solheimii sp. nov., and Ophiostoma taphrorychi sp. nov. O. rufum sp. nov. is a member of the Ophiostoma piceae species complex, while O. pityokteinis sp. nov. resides in a discrete lineage within Ophiostoma s. stricto. O. taphrorychi sp. nov. together with O. distortum formed a well-supported clade in Ophiostoma s. stricto close to O. pityokteinis sp. nov. O. solheimii sp. nov. groups within a currently undefined lineage A, which also includes Ophiostoma grandicarpum and Ophiostoma microsporum. This study highlights the need for more intensive surveys that should include additional countries of Central Europe, insect vectors and host tree species in order to elucidate Ophiostoma species diversity in this region.
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Affiliation(s)
- Robert Jankowiak
- Department of Forest Pathology, Mycology and Tree Physiology, Institute of Forest Ecosystem Protection, University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425, Kraków, Poland.
| | - Piotr Bilański
- Department of Forest Protection, Entomology and Forest Climatology, Institute of Forest Ecosystem Protection, University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425, Kraków, Poland
| | - Beata Strzałka
- Department of Forest Pathology, Mycology and Tree Physiology, Institute of Forest Ecosystem Protection, University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425, Kraków, Poland
| | - Riikka Linnakoski
- Natural Resources Institute Finland (Luke), Latokartanonkaari 9, 00790, Helsinki, Finland
| | - Agnieszka Bosak
- Department of Forest Pathology, Mycology and Tree Physiology, Institute of Forest Ecosystem Protection, University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425, Kraków, Poland
| | - Georg Hausner
- Department of Microbiology, Buller Building 213, University of Manitoba, Winnipeg, R3T 2N2, Canada
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Ophiostomatoid fungi associated with hardwood-infesting bark and ambrosia beetles in Poland: Taxonomic diversity and vector specificity. FUNGAL ECOL 2019. [DOI: 10.1016/j.funeco.2019.02.001] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
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