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Lawley A, Hampson R, Worrall K, Dobie G. Analysis of neural networks for routine classification of sixteen ultrasound upper abdominal cross sections. Abdom Radiol (NY) 2024; 49:651-661. [PMID: 38214722 PMCID: PMC10830611 DOI: 10.1007/s00261-023-04147-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2023] [Revised: 11/28/2023] [Accepted: 11/29/2023] [Indexed: 01/13/2024]
Abstract
PURPOSE Abdominal ultrasound screening requires the capture of multiple standardized plane views as per clinical guidelines. Currently, the extent of adherence to such guidelines is dependent entirely on the skills of the sonographer. The use of neural network classification has the potential to better standardize captured plane views and streamline plane capture reducing the time burden on operators by combatting operator variability. METHODS A dataset consisting of 16 routine upper abdominal ultrasound scans from 64 patients was used to test the classification accuracy of 9 neural networks. These networks were tested on both a small, idealised subset of 800 samples as well as full video sweeps of the region of interest using stratified sampling and transfer learning. RESULTS The highest validation accuracy attained by both GoogLeNet and InceptionV3 is 83.9% using transfer learning and the large sample set of 26,294 images. A top-2 accuracy of 95.1% was achieved using InceptionV3. Alexnet attained the highest accuracy of 79.5% (top-2 of 91.5%) for the smaller sample set of 800 images. The neural networks evaluated during this study were also successfully able to identify problematic individual cross sections such as between kidneys, with right and left kidney being accurately identified 78.6% and 89.7%, respectively. CONCLUSION Dataset size proved a more important factor in determining accuracy than network selection with more complex neural networks providing higher accuracy as dataset size increases and simpler linear neural networks providing better results where the dataset is small.
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Affiliation(s)
- Alistair Lawley
- Faculty Electronic and Electrical Engineering, University of Strathclyde, Glasgow, UK.
| | - Rory Hampson
- Faculty Electronic and Electrical Engineering, University of Strathclyde, Glasgow, UK
| | - Kevin Worrall
- Faculty of Engineering, University of Glasgow, Glasgow, UK
| | - Gordon Dobie
- Faculty Electronic and Electrical Engineering, University of Strathclyde, Glasgow, UK
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2
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Zhao Q, Lan Y, Yin X, Wang K. Image-based AI diagnostic performance for fatty liver: a systematic review and meta-analysis. BMC Med Imaging 2023; 23:208. [PMID: 38082213 PMCID: PMC10712108 DOI: 10.1186/s12880-023-01172-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2023] [Accepted: 12/04/2023] [Indexed: 12/18/2023] Open
Abstract
BACKGROUND The gold standard to diagnose fatty liver is pathology. Recently, image-based artificial intelligence (AI) has been found to have high diagnostic performance. We systematically reviewed studies of image-based AI in the diagnosis of fatty liver. METHODS We searched the Cochrane Library, Pubmed, Embase and assessed the quality of included studies by QUADAS-AI. The pooled sensitivity, specificity, negative likelihood ratio (NLR), positive likelihood ratio (PLR), and diagnostic odds ratio (DOR) were calculated using a random effects model. Summary receiver operating characteristic curves (SROC) were generated to identify the diagnostic accuracy of AI models. RESULTS 15 studies were selected in our meta-analysis. Pooled sensitivity and specificity were 92% (95% CI: 90-93%) and 94% (95% CI: 93-96%), PLR and NLR were 12.67 (95% CI: 7.65-20.98) and 0.09 (95% CI: 0.06-0.13), DOR was 182.36 (95% CI: 94.85-350.61). After subgroup analysis by AI algorithm (conventional machine learning/deep learning), region, reference (US, MRI or pathology), imaging techniques (MRI or US) and transfer learning, the model also demonstrated acceptable diagnostic efficacy. CONCLUSION AI has satisfactory performance in the diagnosis of fatty liver by medical imaging. The integration of AI into imaging devices may produce effective diagnostic tools, but more high-quality studies are needed for further evaluation.
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Affiliation(s)
- Qi Zhao
- Department of Gastroenterology, Shandong Provincial Hospital, Shandong University, Jinan, Shandong, 250021, China
- Department of Hepatology, Institute of Hepatology, Qilu Hospital of Shandong University, Shandong University, Wenhuaxi Road 107#, Jinan, Shandong, 250012, China
- Department of Gastroenterology, Shandong Provincial Hospital Affiliated to Shandong First Medical University, No. 324 Jingwu Road, Jinan, Shandong, 250021, China
- Shandong Booke Biotechnology Co. LTD, Liaocheng, Shandong, China
| | - Yadi Lan
- Department of Gastroenterology, Shandong Provincial Hospital, Shandong University, Jinan, Shandong, 250021, China
| | - Xunjun Yin
- Shandong Booke Biotechnology Co. LTD, Liaocheng, Shandong, China
| | - Kai Wang
- Department of Hepatology, Institute of Hepatology, Qilu Hospital of Shandong University, Shandong University, Wenhuaxi Road 107#, Jinan, Shandong, 250012, China.
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3
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Liu Z, Huang B, Wen H, Lu Z, Huang Q, Jiang M, Dong C, Liu Y, Chen X, Lin H. Automatic Diagnosis of Significant Liver Fibrosis From Ultrasound B-Mode Images Using a Handcrafted-Feature-Assisted Deep Convolutional Neural Network. IEEE J Biomed Health Inform 2023; 27:4938-4949. [PMID: 37471184 DOI: 10.1109/jbhi.2023.3295078] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/22/2023]
Abstract
The accurate diagnosis of significant liver fibrosis ( ≥ F2) in patients with chronic liver disease (CLD) is critical, as ≥ F2 is a crucial factor that should be considered in selecting an antiviral therapy for these patients. This article proposes a handcrafted-feature-assisted deep convolutional neural network (HFA-DCNN) that helps radiologists automatically and accurately diagnose significant liver fibrosis from ultrasound (US) brightness (B)-mode images. The HFA-DCNN model has three main branches: one for automatic region of interest (ROI) segmentation in the US images, another for attention deep feature learning from the segmented ROI, and the third for handcrafted feature extraction. The attention deep learning features and handcrafted features are fused in the back end of the model to enable more accurate diagnosis of significant liver fibrosis. The usefulness and effectiveness of the proposed model were validated on a dataset built upon 321 CLD patients with liver fibrosis stages confirmed by pathological evaluations. In a fivefold cross validation (FFCV), the proposed model achieves accuracy, sensitivity, specificity, and area under the receiver-operating-characteristic (ROC) curve (AUC) values of 0.863 (95% confidence interval (CI) 0.820-0.899), 0.879 (95% CI 0.823-0.920), 0.872 (95% CI 0.800-0.925), and 0.925 (95% CI 0.891-0.952), which are significantly better than those obtained by the comparative methods. Given its excellent performance, the proposed HFA-DCNN model can serve as a promising tool for the noninvasive and accurate diagnosis of significant liver fibrosis in CLD patients.
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Singh S, Hoque S, Zekry A, Sowmya A. Radiological Diagnosis of Chronic Liver Disease and Hepatocellular Carcinoma: A Review. J Med Syst 2023; 47:73. [PMID: 37432493 PMCID: PMC10335966 DOI: 10.1007/s10916-023-01968-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2022] [Accepted: 07/02/2023] [Indexed: 07/12/2023]
Abstract
Medical image analysis plays a pivotal role in the evaluation of diseases, including screening, surveillance, diagnosis, and prognosis. Liver is one of the major organs responsible for key functions of metabolism, protein and hormone synthesis, detoxification, and waste excretion. Patients with advanced liver disease and Hepatocellular Carcinoma (HCC) are often asymptomatic in the early stages; however delays in diagnosis and treatment can lead to increased rates of decompensated liver diseases, late-stage HCC, morbidity and mortality. Ultrasound (US) is commonly used imaging modality for diagnosis of chronic liver diseases that includes fibrosis, cirrhosis and portal hypertension. In this paper, we first provide an overview of various diagnostic methods for stages of liver diseases and discuss the role of Computer-Aided Diagnosis (CAD) systems in diagnosing liver diseases. Second, we review the utility of machine learning and deep learning approaches as diagnostic tools. Finally, we present the limitations of existing studies and outline future directions to further improve diagnostic accuracy, as well as reduce cost and subjectivity, while also improving workflow for the clinicians.
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Affiliation(s)
- Sonit Singh
- School of CSE, UNSW Sydney, High St, Kensington, 2052, NSW, Australia.
| | - Shakira Hoque
- Gastroenterology and Hepatology Department, St George Hospital, Hogben St, Kogarah, 2217, NSW, Australia
| | - Amany Zekry
- St George and Sutherland Clinical Campus, School of Clinical Medicine, UNSW, High St, Kensington, 2052, NSW, Australia
- Gastroenterology and Hepatology Department, St George Hospital, Hogben St, Kogarah, 2217, NSW, Australia
| | - Arcot Sowmya
- School of CSE, UNSW Sydney, High St, Kensington, 2052, NSW, Australia
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Yao Y, Zhang Z, Peng B, Tang J. Bio-Inspired Network for Diagnosing Liver Steatosis in Ultrasound Images. Bioengineering (Basel) 2023; 10:768. [PMID: 37508795 PMCID: PMC10376777 DOI: 10.3390/bioengineering10070768] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2023] [Revised: 06/15/2023] [Accepted: 06/23/2023] [Indexed: 07/30/2023] Open
Abstract
Using ultrasound imaging to diagnose liver steatosis is of great significance for preventing diseases such as cirrhosis and liver cancer. Accurate diagnosis under conditions of low quality, noise and poor resolutions is still a challenging task. Physiological studies have shown that the visual cortex of the biological visual system has selective attention neural mechanisms and feedback regulation of high features to low features. When processing visual information, these cortical regions selectively focus on more sensitive information and ignore unimportant details, which can effectively extract important features from visual information. Inspired by this, we propose a new diagnostic network for hepatic steatosis. In order to simulate the selection mechanism and feedback regulation of the visual cortex in the ventral pathway, it consists of a receptive field feature extraction module, parallel attention module and feedback connection. The receptive field feature extraction module corresponds to the inhibition of the non-classical receptive field of V1 neurons on the classical receptive field. It processes the input image to suppress the unimportant background texture. Two types of attention are adopted in the parallel attention module to process the same visual information and extract different important features for fusion, which improves the overall performance of the model. In addition, we construct a new dataset of fatty liver ultrasound images and validate the proposed model on this dataset. The experimental results show that the network has good performance in terms of sensitivity, specificity and accuracy for the diagnosis of fatty liver disease.
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Affiliation(s)
- Yuan Yao
- General Practice Medical Center, West China Hospital, Sichuan University, Chengdu 610044, China
| | - Zhenguang Zhang
- School of Automation, Guangxi University of Science and Technology, Liuzhou 545006, China
| | - Bo Peng
- School of Computing and Artificial Intelligent, Southwest Jiaotong University, Chengdu 611756, China
| | - Jin Tang
- Tiaodenghe Community Health Service Center, Chengdu 610066, China
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Alshagathrh FM, Househ MS. Artificial Intelligence for Detecting and Quantifying Fatty Liver in Ultrasound Images: A Systematic Review. BIOENGINEERING (BASEL, SWITZERLAND) 2022; 9:bioengineering9120748. [PMID: 36550954 PMCID: PMC9774180 DOI: 10.3390/bioengineering9120748] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/23/2022] [Revised: 10/20/2022] [Accepted: 10/30/2022] [Indexed: 12/05/2022]
Abstract
BACKGROUND Non-alcoholic Fatty Liver Disease (NAFLD) is growing more prevalent worldwide. Although non-invasive diagnostic approaches such as conventional ultrasonography and clinical scoring systems have been proposed as alternatives to liver biopsy, their efficacy has been called into doubt. Artificial Intelligence (AI) is now combined with traditional diagnostic processes to improve the performance of non-invasive approaches. OBJECTIVE This study explores how well various AI methods function and perform on ultrasound (US) images to diagnose and quantify non-alcoholic fatty liver disease. METHODOLOGY A systematic review was conducted to achieve this objective. Five science bibliographic databases were searched, including PubMed, Association for Computing Machinery ACM Digital Library, Institute of Electrical and Electronics Engineers IEEE Xplore, Scopus, and Google Scholar. Only peer-reviewed English articles, conferences, theses, and book chapters were included. Data from studies were synthesized using narrative methodologies per Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) criteria. RESULTS Forty-nine studies were included in the systematic review. According to the qualitative analysis, AI significantly enhanced the diagnosis of NAFLD, Non-Alcoholic Steatohepatitis (NASH), and liver fibrosis. In addition, modalities, image acquisition, feature extraction and selection, data management, and classifiers were assessed and compared in terms of performance measures (i.e., accuracy, sensitivity, and specificity). CONCLUSION AI-supported systems show potential performance increases in detecting and quantifying steatosis, NASH, and liver fibrosis in NAFLD patients. Before real-world implementation, prospective studies with direct comparisons of AI-assisted modalities and conventional techniques are necessary.
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Kalejahi BK, Meshgini S, Danishvar S, Khorram S. Diagnosis of liver disease by computer- assisted imaging techniques: A literature review. INTELL DATA ANAL 2022. [DOI: 10.3233/ida-216379] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Diagnosis of liver disease using computer-aided detection (CAD) systems is one of the most efficient and cost-effective methods of medical image diagnosis. Accurate disease detection by using ultrasound images or other medical imaging modalities depends on the physician’s or doctor’s experience and skill. CAD systems have a critical role in helping experts make accurate and right-sized assessments. There are different types of CAD systems for diagnosing different diseases, and one of the applications is in liver disease diagnosis and detection by using intelligent algorithms to detect any abnormalities. Machine learning and deep learning algorithms and models play also a big role in this area. In this article, we tried to review the techniques which are utilized in different stages of CAD systems and pursue the methods used in preprocessing, extracting, and selecting features and classification. Also, different techniques are used to segment and analyze the liver ultrasound medical images, which is still a challenging approach to how to use these techniques and their technical and clinical effectiveness as a global approach.
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Affiliation(s)
- Behnam Kiani Kalejahi
- Department of Biomedical Engineering, Faculty of Electrical and Computer Engineering, University of Tabriz, Tabriz, Iran
| | - Saeed Meshgini
- Department of Biomedical Engineering, Faculty of Electrical and Computer Engineering, University of Tabriz, Tabriz, Iran
| | - Sebelan Danishvar
- Department of Electronics and Computer Engineering, College of Engineering, Design and Physical Sciences, Brunel University, UK
| | - Sara Khorram
- Department of Computer Engineering, Faculty of Engineering, Alzahra University, Tehran, Iran
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8
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Wen H, Zheng W, Li M, Li Q, Liu Q, Zhou J, Liu Z, Chen X. Multiparametric Quantitative US Examination of Liver Fibrosis: A Feature-engineering and Machine-learning Based Analysis. IEEE J Biomed Health Inform 2021; 26:715-726. [PMID: 34329172 DOI: 10.1109/jbhi.2021.3100319] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Quantitative ultrasound (QUS), which is commonly used to extract quantitative features from the ultrasound radiofrequency (RF) data or the RF envelope signals for tissue characterization, is becoming a promising technique for noninvasive assessments of liver fibrosis. However, the number of feature variables examined and finally used in the existing QUS methods is typically small, to some extent limiting the diagnostic performance. Therefore, this paper devises a new multiparametric QUS (MP-QUS) method which enables the extraction of a large number of feature variables from US RF signals and allows for the use of feature-engineering and machinelearning based algorithms for liver fibrosis assessment. In the MP-QUS, eighty-four feature variables were extracted from multiple QUS parametric maps derived from the RF signals and the envelope data. Afterwards, feature reduction and selection were performed in turn to remove the feature redundancy and identify the best combination of features in the reduced feature set. Finally, a variety of machine-learning algorithms were tested for classifying liver fibrosis with the selected features, based on the results of which the optimal classifier was established and used for final classification. The performance of the proposed MPQUS method for staging liver fibrosis was evaluated on an animal model, with histologic examination as the reference standard. The mean accuracy, sensitivity, specificity and area under the receiver-operating-characteristic curve achieved by MP-QUS are respectively 83.38%, 86.04%, 80.82% and 0.891 for recognizing significant liver fibrosis, and 85.50%, 88.92%, 85.24% and 0.924 for diagnosing liver cirrhosis. The proposed MP-QUS method paves a way for its future extension to assess liver fibrosis in human subjects.
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9
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Saffari SZ, Tabatabaey-Mashadi N, Sadeghi Bajestani G, Razmpour F, Alamdaran SA. Challenging the published fatty liver disease integrated index based on ultrasound images. Biomed Signal Process Control 2021. [DOI: 10.1016/j.bspc.2021.102552] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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10
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Kim KB, Kim GH, Song DH, Park HJ, Kim CW. Automatic segmentation of liver/kidney area with double-layered fuzzy C-means and the utility of hepatorenal index for fatty liver severity classification. JOURNAL OF INTELLIGENT & FUZZY SYSTEMS 2020. [DOI: 10.3233/jifs-191850] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Kwang Baek Kim
- Division of Computer Software Engineering, Silla University, Busan, Korea
| | - Gwang Ha Kim
- Department of Internal Medicine, School of Medicine and Biomedical Research Institute, Pusan National University, Pusan National University Hospital, Busan, Korea
| | - Doo Heon Song
- Department of Computer Games, Yong-in SongDam College, Yongin, Korea
| | - Hyun Jun Park
- Division of Software Convergence, Cheongju University, Cheongju, Korea
| | - Chang Won Kim
- Department of Radiology, School of Medicine and Biomedical Research Institute, Pusan National University, Pusan National University Hospital, Busan, Korea
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11
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Chen CI, Chen TB, Lu NH, Du WC, Liang CY, Liu KI, Hsu SY, Lin LW, Huang YH. Classification for liver ultrasound tomography by posterior attenuation correction with a phantom study. Proc Inst Mech Eng H 2019; 233:1100-1112. [PMID: 31441386 DOI: 10.1177/0954411919871123] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
The B-mode ultrasound usually contains scattering speckle noise which reduces the detailed resolution of the target and is regarded as an intrinsic noise that interferes with diagnostic precision. The aim of this study was to classify hepatic steatosis through applying attenuation correction with a phantom to reduce speckle noise in liver ultrasound tomography in patients. This retrospective study applied three randomized groups signifying different liver statuses. A total of 114 patients' effective liver ultrasound images-30 normal, 44 fatty, and 40 cancerous-were included. The proposed depth attenuation correction method was first applied to images. Three regions of interest were manually drawn on the images. Next, five feature values for the regions of interest were calculated. Finally, the hybrid method of logistic regression and support vector machine was employed to classify the ultrasound images with 10-fold cross-validation. The accuracy, kappa statistic, and mean absolute error of the proposed hybrid method were 87.5%, 0.812, and 0.119, respectively, which were higher than those of the logistic regression method-75.0%, 0.548, and 0.280-or those of the support vector machine method-75.7%, 0.637, and 0.293-respectively. Therefore, the hybrid method has been proven to be more accurate and have better performance and less error than either single method. The hybrid method provided acceptable accuracy of classification in three liver ultrasound image groups after depth attenuation correction. In the future, the deep learning approaches may be considered for the application in classifying liver ultrasound images.
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Affiliation(s)
- Chih-I Chen
- Department of Information Engineering, I-Shou University, Kaohsiung.,Division of Colon & Rectal Surgery, Department of Surgery, E-Da Hospital, I-Shou University, Kaohsiung
| | - Tai-Been Chen
- Department of Medical Imaging and Radiological Sciences, I-Shou University, Kaohsiung
| | - Nan-Han Lu
- Department of Medical Imaging and Radiological Sciences, I-Shou University, Kaohsiung.,Department of Radiology, E-Da Hospital, I-Shou University, Kaohsiung
| | - Wei-Chang Du
- Department of Information Engineering, I-Shou University, Kaohsiung
| | - Chih-Yu Liang
- Department of Information Engineering, I-Shou University, Kaohsiung.,Department of Medical Imaging and Radiological Sciences, I-Shou University, Kaohsiung.,Department of Emergency Medicine, E-Da Hospital, I-Shou University, Kaohsiung
| | - Ko-Ing Liu
- Department of Radiology, E-Da Cancer Hospital, I-Shou University, Kaohsiung
| | - Shih-Yen Hsu
- Department of Information Engineering, I-Shou University, Kaohsiung
| | - Li Wei Lin
- The School of Chinese Medicine for Post-Baccalaureate, I-Shou University, Kaohsiung
| | - Yung-Hui Huang
- Department of Medical Imaging and Radiological Sciences, I-Shou University, Kaohsiung
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Nishida N, Yamakawa M, Shiina T, Kudo M. Current status and perspectives for computer-aided ultrasonic diagnosis of liver lesions using deep learning technology. Hepatol Int 2019; 13:416-421. [PMID: 30790230 DOI: 10.1007/s12072-019-09937-4] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/12/2018] [Accepted: 02/02/2019] [Indexed: 12/13/2022]
Abstract
An ultrasound (US) examination is a common noninvasive technique widely applied for diagnosis of a variety of diseases. Based on the rapid development of US equipment, many US images have been accumulated and are now available and ready for the preparation of a database for the development of computer-aided US diagnosis with deep learning technology. On the contrary, because of the unique characteristics of the US image, there could be some issues that need to be resolved for the establishment of computer-aided diagnosis (CAD) system in this field. For example, compared to the other modalities, the quality of a US image is, currently, highly operator dependent; the conditions of examination should also directly affect the quality of US images. So far, these factors have hampered the application of deep learning-based technology in the field of US diagnosis. However, the development of CAD and US technologies will contribute to an increase in diagnostic quality, facilitate the development of remote medicine, and reduce the costs in the national health care through the early diagnosis of diseases. From this point of view, it may have a large enough potential to induce a paradigm shift in the field of US imaging and diagnosis of liver diseases.
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Affiliation(s)
- Naoshi Nishida
- Department of Gastroenterology and Hepatology, Faculty of Medicine, Kindai University, 337-2 Ohno-higashi, Osaka-sayama, Osaka, 589-8511, Japan.
| | - Makoto Yamakawa
- Department of Human Health Sciences, Graduate School of Medicine, Kyoto University, Kyoto, Japan
| | - Tsuyoshi Shiina
- Department of Human Health Sciences, Graduate School of Medicine, Kyoto University, Kyoto, Japan
| | - Masatoshi Kudo
- Department of Gastroenterology and Hepatology, Faculty of Medicine, Kindai University, 337-2 Ohno-higashi, Osaka-sayama, Osaka, 589-8511, Japan
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Classification of Liver Diseases Based on Ultrasound Image Texture Features. APPLIED SCIENCES-BASEL 2019. [DOI: 10.3390/app9020342] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
This paper discusses using computer-aided diagnosis (CAD) to distinguish between hepatocellular carcinoma (HCC), i.e., the most common type of primary liver malignancy and a leading cause of death in people with cirrhosis worldwide, and liver abscess based on ultrasound image texture features and a support vector machine (SVM) classifier. Among 79 cases of liver diseases including 44 cases of liver cancer and 35 cases of liver abscess, this research extracts 96 features including 52 features of the gray-level co-occurrence matrix (GLCM) and 44 features of the gray-level run-length matrix (GLRLM) from the regions of interest (ROIs) in ultrasound images. Three feature selection models—(i) sequential forward selection (SFS), (ii) sequential backward selection (SBS), and (iii) F-score—are adopted to distinguish the two liver diseases. Finally, the developed system can classify liver cancer and liver abscess by SVM with an accuracy of 88.875%. The proposed methods for CAD can provide diagnostic assistance while distinguishing these two types of liver lesions.
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14
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Automated Classification of Fatty and Normal Liver Ultrasound Images Based on Mutual Information Feature Selection. Ing Rech Biomed 2018. [DOI: 10.1016/j.irbm.2018.09.006] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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15
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A Novel Liver Image Classification Method Using Perceptual Hash-Based Convolutional Neural Network. ARABIAN JOURNAL FOR SCIENCE AND ENGINEERING 2018. [DOI: 10.1007/s13369-018-3454-1] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
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Owjimehr M, Danyali H, Helfroush MS, Shakibafard A. Staging of Fatty Liver Diseases Based on Hierarchical Classification and Feature Fusion for Back-Scan-Converted Ultrasound Images. ULTRASONIC IMAGING 2017; 39:79-95. [PMID: 27694278 DOI: 10.1177/0161734616649153] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Fatty liver disease is progressive and may not cause any symptoms at early stages. This disease is potentially fatal and can cause liver cancer in severe stages. Therefore, diagnosing and staging fatty liver disease in early stages is necessary. In this paper, a novel method is presented to classify normal and fatty liver, as well as discriminate three stages of fatty liver in ultrasound images. This study is performed with 129 subjects including 28 normal, 47 steatosis, 42 fibrosis, and 12 cirrhosis images. The proposed approach uses back-scan conversion of ultrasound sector images and is based on a hierarchical classification. The proposed algorithm is performed in two parts. The first part selects the optimum regions of interest from the focal zone of the back-scan-converted ultrasound images. In the second part, discrimination between normal and fatty liver is performed and then steatosis, fibrosis, and cirrhosis are classified in a hierarchical basis. The wavelet packet transform and gray-level co-occurrence matrix are used to obtain a number of statistical features. A support vector machine classifier is used to discriminate between normal and fatty liver, and stage fatty cases. The results of the proposed scheme clearly illustrate the efficiency of this system with overall accuracy of 94.91% and also specificity of more than 90%.
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Bharti P, Mittal D, Ananthasivan R. Computer-aided Characterization and Diagnosis of Diffuse Liver Diseases Based on Ultrasound Imaging: A Review. ULTRASONIC IMAGING 2017; 39:33-61. [PMID: 27097589 DOI: 10.1177/0161734616639875] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Diffuse liver diseases, such as hepatitis, fatty liver, and cirrhosis, are becoming a leading cause of fatality and disability all over the world. Early detection and diagnosis of these diseases is extremely important to save lives and improve effectiveness of treatment. Ultrasound imaging, a noninvasive diagnostic technique, is the most commonly used modality for examining liver abnormalities. However, the accuracy of ultrasound-based diagnosis depends highly on expertise of radiologists. Computer-aided diagnosis systems based on ultrasound imaging assist in fast diagnosis, provide a reliable "second opinion" for experts, and act as an effective tool to measure response of treatment on patients undergoing clinical trials. In this review, we first describe appearance of liver abnormalities in ultrasound images and state the practical issues encountered in characterization of diffuse liver diseases that can be addressed by software algorithms. We then discuss computer-aided diagnosis in general with features and classifiers relevant to diffuse liver diseases. In later sections of this paper, we review the published studies and describe the key findings of those studies. A concise tabular summary comparing image database, features extraction, feature selection, and classification algorithms presented in the published studies is also exhibited. Finally, we conclude with a summary of key findings and directions for further improvements in the areas of accuracy and objectiveness of computer-aided diagnosis.
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Affiliation(s)
- Puja Bharti
- 1 Department of Electrical and Instrumentation Engineering, Thapar University, Patiala, India
| | - Deepti Mittal
- 1 Department of Electrical and Instrumentation Engineering, Thapar University, Patiala, India
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18
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Automated characterization of fatty liver disease and cirrhosis using curvelet transform and entropy features extracted from ultrasound images. Comput Biol Med 2016; 79:250-258. [PMID: 27825038 DOI: 10.1016/j.compbiomed.2016.10.022] [Citation(s) in RCA: 64] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2016] [Revised: 10/26/2016] [Accepted: 10/27/2016] [Indexed: 02/07/2023]
Abstract
Fatty liver disease (FLD) is reversible disease and can be treated, if it is identified at an early stage. However, if diagnosed at the later stage, it can progress to an advanced liver disease such as cirrhosis which may ultimately lead to death. Therefore, it is essential to detect it at an early stage before the disease progresses to an irreversible stage. Several non-invasive computer-aided techniques are proposed to assist in the early detection of FLD and cirrhosis using ultrasound images. In this work, we are proposing an algorithm to discriminate automatically the normal, FLD and cirrhosis ultrasound images using curvelet transform (CT) method. Higher order spectra (HOS) bispectrum, HOS phase, fuzzy, Kapoor, max, Renyi, Shannon, Vajda and Yager entropies are extracted from CT coefficients. These extracted features are subjected to locality sensitive discriminant analysis (LSDA) feature reduction method. Then these LSDA coefficients ranked based on F-value are fed to different classifiers to choose the best performing classifier using minimum number of features. Our proposed technique can characterize normal, FLD and cirrhosis using probabilistic neural network (PNN) classifier with an accuracy of 97.33%, specificity of 100.00% and sensitivity of 96.00% using only six features. In addition, these chosen features are used to develop a liver disease index (LDI) to differentiate the normal, FLD and cirrhosis classes using a single number. This can significantly help the radiologists to discriminate FLD and cirrhosis in their routine liver screening.
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Manzoor U, Nefti S, Ferdinando M. Investigating the Effectiveness of Wavelet Approximations in Resizing Images for Ultrasound Image Classification. J Med Syst 2016; 40:221. [PMID: 27586590 DOI: 10.1007/s10916-016-0573-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2016] [Accepted: 08/11/2016] [Indexed: 11/26/2022]
Abstract
Images are difficult to classify and annotate but the availability of digital image databases creates a constant demand for tools that automatically analyze image content and describe it with either a category or a set of variables. Ultrasound Imaging is very popular and is widely used to see the internal organ(s) condition of the patient. The main target of this research is to develop a robust image processing techniques for a better and more accurate medical image retrieval and categorization. This paper looks at an alternative to feature extraction for image classification such as image resizing technique. A new mean for image resizing using wavelet transform is proposed. Results, using real medical images, have shown the effectiveness of the proposed technique for classification task comparing to bi-cubic interpolation and feature extraction.
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Affiliation(s)
- Umar Manzoor
- King Abdulaziz University, Jeddah, Saudi Arabia.
| | - Samia Nefti
- School of Computing, Science and Engineering, The University of Salford, Greater Manchester, Salford, UK
| | - Milella Ferdinando
- School of Computing, Science and Engineering, The University of Salford, Greater Manchester, Salford, UK
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20
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Goceri E, Shah ZK, Layman R, Jiang X, Gurcan MN. Quantification of liver fat: A comprehensive review. Comput Biol Med 2016; 71:174-89. [PMID: 26945465 DOI: 10.1016/j.compbiomed.2016.02.013] [Citation(s) in RCA: 47] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2015] [Revised: 02/18/2016] [Accepted: 02/19/2016] [Indexed: 12/19/2022]
Abstract
Fat accumulation in the liver causes metabolic diseases such as obesity, hypertension, diabetes or dyslipidemia by affecting insulin resistance, and increasing the risk of cardiac complications and cardiovascular disease mortality. Fatty liver diseases are often reversible in their early stage; therefore, there is a recognized need to detect their presence and to assess its severity to recognize fat-related functional abnormalities in the liver. This is crucial in evaluating living liver donors prior to transplantation because fat content in the liver can change liver regeneration in the recipient and donor. There are several methods to diagnose fatty liver, measure the amount of fat, and to classify and stage liver diseases (e.g. hepatic steatosis, steatohepatitis, fibrosis and cirrhosis): biopsy (the gold-standard procedure), clinical (medical physics based) and image analysis (semi or fully automated approaches). Liver biopsy has many drawbacks: it is invasive, inappropriate for monitoring (i.e., repeated evaluation), and assessment of steatosis is somewhat subjective. Qualitative biomarkers are mostly insufficient for accurate detection since fat has to be quantified by a varying threshold to measure disease severity. Therefore, a quantitative biomarker is required for detection of steatosis, accurate measurement of severity of diseases, clinical decision-making, prognosis and longitudinal monitoring of therapy. This study presents a comprehensive review of both clinical and automated image analysis based approaches to quantify liver fat and evaluate fatty liver diseases from different medical imaging modalities.
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Affiliation(s)
- Evgin Goceri
- Department of Biomedical Informatics, College of Medicine, The Ohio State University, Columbus, USA.
| | - Zarine K Shah
- Department of Radiology, Wexner Medical Center, The Ohio State University, Columbus, USA
| | - Rick Layman
- Department of Radiology, Wexner Medical Center, The Ohio State University, Columbus, USA
| | - Xia Jiang
- Department of Radiology, Wexner Medical Center, The Ohio State University, Columbus, USA
| | - Metin N Gurcan
- Department of Biomedical Informatics, College of Medicine, The Ohio State University, Columbus, USA
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21
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Dey N, Bose S, Das A, Chaudhuri SS, Saba L, Shafique S, Nicolaides A, Suri JS. Effect of Watermarking on Diagnostic Preservation of Atherosclerotic Ultrasound Video in Stroke Telemedicine. J Med Syst 2016; 40:91. [PMID: 26860914 DOI: 10.1007/s10916-016-0451-3] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2014] [Accepted: 01/29/2016] [Indexed: 11/29/2022]
Abstract
Embedding of diagnostic and health care information requires secure encryption and watermarking. This research paper presents a comprehensive study for the behavior of some well established watermarking algorithms in frequency domain for the preservation of stroke-based diagnostic parameters. Two different sets of watermarking algorithms namely: two correlation-based (binary logo hiding) and two singular value decomposition (SVD)-based (gray logo hiding) watermarking algorithms are used for embedding ownership logo. The diagnostic parameters in atherosclerotic plaque ultrasound video are namely: (a) bulb identification and recognition which consists of identifying the bulb edge points in far and near carotid walls; (b) carotid bulb diameter; and (c) carotid lumen thickness all along the carotid artery. The tested data set consists of carotid atherosclerotic movies taken under IRB protocol from University of Indiana Hospital, USA-AtheroPoint™ (Roseville, CA, USA) joint pilot study. ROC (receiver operating characteristic) analysis was performed on the bulb detection process that showed an accuracy and sensitivity of 100 % each, respectively. The diagnostic preservation (DPsystem) for SVD-based approach was above 99 % with PSNR (Peak signal-to-noise ratio) above 41, ensuring the retention of diagnostic parameter devalorization as an effect of watermarking. Thus, the fully automated proposed system proved to be an efficient method for watermarking the atherosclerotic ultrasound video for stroke application.
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Affiliation(s)
- Nilanjan Dey
- Department of Electronics and Telecommunication Engineering, Jadavpur University, Kolkata, India.,Department of Information Technology, Techno India College of Technology, Kolkata, India.,Point of Care Devices, Global Biomedical Technologies, Inc, Roseville, CA, USA
| | - Soumyo Bose
- Department of Information Technology, Techno India College of Technology, Kolkata, India
| | - Achintya Das
- Department of ECE, Kalyani Government Engineering College, Bengal, India
| | - Sheli Sinha Chaudhuri
- Department of Electronics and Telecommunication Engineering, Jadavpur University, Kolkata, India
| | - Luca Saba
- Radiology Department, zienda Ospedaliero Universitaria (A.O.U.) di Cagliari, Via Roma, 67, 56126, Pisa, PI, Italy
| | - Shoaib Shafique
- CorVasc Vascular Laboratory, 8433 Harcourt Rd #100, Indianapolis, IN, USA
| | - Andrew Nicolaides
- Vascular Screening and Diagnostic Centre, London, UK.,Department of Biological Sciences, University of Cyprus, Nicosia, Cyprus
| | - Jasjit S Suri
- Point of Care Devices, Global Biomedical Technologies, Inc, Roseville, CA, USA. .,Diagnostic and Monitoring Division, AtheroPoint™ LLC, Roseville, CA, USA. .,Electrical Engineering Department (Affl.), Idaho State University, 921 S 8th Ave, Pocatello, ID, 83201, USA.
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22
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Wu JY, Tuomi A, Beland MD, Konrad J, Glidden D, Grand D, Merck D. Quantitative analysis of ultrasound images for computer-aided diagnosis. J Med Imaging (Bellingham) 2016; 3:014501. [PMID: 26835502 DOI: 10.1117/1.jmi.3.1.014501] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2015] [Accepted: 12/18/2015] [Indexed: 01/06/2023] Open
Abstract
We propose an adaptable framework for analyzing ultrasound (US) images quantitatively to provide computer-aided diagnosis using machine learning. Our preliminary clinical targets are hepatic steatosis, adenomyosis, and craniosynostosis. For steatosis and adenomyosis, we collected US studies from 288 and 88 patients, respectively, as well as their biopsy or magnetic resonanceconfirmed diagnosis. Radiologists identified a region of interest (ROI) on each image. We filtered the US images for various texture responses and use the pixel intensity distribution within each ROI as feature parameterizations. Our craniosynostosis dataset consisted of 22 CT-confirmed cases and 22 age-matched controls. One physician manually measured the vectors from the center of the skull to the outer cortex at every 10 deg for each image and we used the principal directions as shape features for parameterization. These parameters and the known diagnosis were used to train classifiers. Testing with cross-validation, we obtained 72.74% accuracy and 0.71 area under receiver operating characteristics curve for steatosis ([Formula: see text]), 77.27% and 0.77 for adenomyosis ([Formula: see text]), and 88.63% and 0.89 for craniosynostosis ([Formula: see text]). Our framework is able to detect a variety of diseases with high accuracy. We hope to include it as a routinely available support system in the clinic.
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Affiliation(s)
- Jie Ying Wu
- Brown University , School of Engineering, 82 Hope Street, Providence, Rhode Island 02912, United States
| | - Adam Tuomi
- Brown University , Alpert Medical School, 222 Richmond Street, Providence, Rhode Island 02903, United States
| | - Michael D Beland
- Rhode Island Hospital , Department of Diagnostic Imaging, 593 Eddy Street, Providence, Rhode Island 02903, United States
| | - Joseph Konrad
- Rhode Island Hospital , Department of Diagnostic Imaging, 593 Eddy Street, Providence, Rhode Island 02903, United States
| | - David Glidden
- Brown University , Alpert Medical School, 222 Richmond Street, Providence, Rhode Island 02903, United States
| | - David Grand
- Rhode Island Hospital , Department of Diagnostic Imaging, 593 Eddy Street, Providence, Rhode Island 02903, United States
| | - Derek Merck
- Rhode Island Hospital , Department of Diagnostic Imaging, 593 Eddy Street, Providence, Rhode Island 02903, United States
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23
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Alivar A, Danyali H, Helfroush MS. Hierarchical classification of normal, fatty and heterogeneous liver diseases from ultrasound images using serial and parallel feature fusion. Biocybern Biomed Eng 2016. [DOI: 10.1016/j.bbe.2016.07.003] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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24
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Subramanya MB, Kumar V, Mukherjee S, Saini M. SVM-Based CAC System for B-Mode Kidney Ultrasound Images. J Digit Imaging 2015; 28:448-58. [PMID: 25537457 PMCID: PMC4501960 DOI: 10.1007/s10278-014-9754-4] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022] Open
Abstract
The present study proposes a computer-aided classification (CAC) system for three kidney classes, viz. normal, medical renal disease (MRD) and cyst using B-mode ultrasound images. Thirty-five B-mode kidney ultrasound images consisting of 11 normal images, 8 MRD images and 16 cyst images have been used. Regions of interest (ROIs) have been marked by the radiologist from the parenchyma region of the kidney in case of normal and MRD cases and from regions inside lesions for cyst cases. To evaluate the contribution of texture features extracted from de-speckled images for the classification task, original images have been pre-processed by eight de-speckling methods. Six categories of texture features are extracted. One-against-one multi-class support vector machine (SVM) classifier has been used for the present work. Based on overall classification accuracy (OCA), features from ROIs of original images are concatenated with the features from ROIs of pre-processed images. On the basis of OCA, few feature sets are considered for feature selection. Differential evolution feature selection (DEFS) has been used to select optimal features for the classification task. DEFS process is repeated 30 times to obtain 30 subsets. Run-length matrix features from ROIs of images pre-processed by Lee's sigma concatenated with that of enhanced Lee method have resulted in an average accuracy (in %) and standard deviation of 86.3 ± 1.6. The results obtained in the study indicate that the performance of the proposed CAC system is promising, and it can be used by the radiologists in routine clinical practice for the classification of renal diseases.
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Affiliation(s)
- M. B. Subramanya
- />Department of Electrical Engineering, Indian Institute of Technology Roorkee, Roorkee, Uttarakhand 247667 India
| | - Vinod Kumar
- />Department of Electrical Engineering, Indian Institute of Technology Roorkee, Roorkee, Uttarakhand 247667 India
| | | | - Manju Saini
- />Department of Radiology, Himalayan Institute of Medical Sciences, HIHT University, PO Doiwala, Dehradun, 248140 India
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25
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Quantification of Hepatorenal Index for Computer-Aided Fatty Liver Classification with Self-Organizing Map and Fuzzy Stretching from Ultrasonography. BIOMED RESEARCH INTERNATIONAL 2015; 2015:535894. [PMID: 26247023 PMCID: PMC4515496 DOI: 10.1155/2015/535894] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/29/2014] [Accepted: 11/17/2014] [Indexed: 01/18/2023]
Abstract
Accurate measures of liver fat content are essential for investigating hepatic steatosis. For a noninvasive inexpensive ultrasonographic analysis, it is necessary to validate the quantitative assessment of liver fat content so that fully automated reliable computer-aided software can assist medical practitioners without any operator subjectivity. In this study, we attempt to quantify the hepatorenal index difference between the liver and the kidney with respect to the multiple severity status of hepatic steatosis. In order to do this, a series of carefully designed image processing techniques, including fuzzy stretching and edge tracking, are applied to extract regions of interest. Then, an unsupervised neural learning algorithm, the self-organizing map, is designed to establish characteristic clusters from the image, and the distribution of the hepatorenal index values with respect to the different levels of the fatty liver status is experimentally verified to estimate the differences in the distribution of the hepatorenal index. Such findings will be useful in building reliable computer-aided diagnostic software if combined with a good set of other characteristic feature sets and powerful machine learning classifiers in the future.
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26
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Subramanya MB, Kumar V, Mukherjee S, Saini M. A CAD system for B-mode fatty liver ultrasound images using texture features. J Med Eng Technol 2014; 39:123-30. [DOI: 10.3109/03091902.2014.990160] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
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27
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König T, Steffen J, Rak M, Neumann G, von Rohden L, Tönnies KD. Ultrasound texture-based CAD system for detecting neuromuscular diseases. Int J Comput Assist Radiol Surg 2014; 10:1493-503. [PMID: 25451320 DOI: 10.1007/s11548-014-1133-6] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2014] [Accepted: 11/18/2014] [Indexed: 10/24/2022]
Abstract
PURPOSE Diagnosis of neuromuscular diseases in ultrasonography is a challenging task since experts are often unable to discriminate between healthy and pathological cases. A computer-aided diagnosis (CAD) system for skeletal muscle ultrasonography was developed and tested for myositis detection in ultrasound images of biceps brachii. METHODS Several types of features were extracted from rectangular and polygonal image regions-of-interest (ROIs), including first-order statistics, wavelet-based features, and Haralick's features. Features were chosen that are sensitive to the change in contrast and structure for pathological ultrasound images of neuromuscular diseases. The number of features was reduced by applying different sequential feature selection strategies followed by a supervised principal component analysis. For classification, two linear approaches were investigated: Fisher's classifier and the linear support vector machine (SVM) as well as the nonlinear [Formula: see text]-nearest neighbor approach. The CAD system was benchmarked on datasets of 18 subjects, seven of which were healthy, while 11 were affected by myositis. Three expert radiologists provided pre-classification and testing interpretations. RESULTS Leave-one-out cross-validation on the training data revealed that the linear SVM was best suited for discriminating healthy and pathological muscle tissue, achieving 85/87 % accuracy, 90 % sensitivity, and 83/85 % specificity, depending on the radiologist. CONCLUSION A muscle ultrasonography CAD system was developed, allowing a classification of an ultrasound image by one-click positioning of rectangular ROIs with minimal user effort. The applicability of the system was demonstrated with the challenging example of myositis detection, showing highly accurate results that were robust to imprecise user input.
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Affiliation(s)
- Tim König
- Department of Simulation and Graphics, Otto von Guericke University, Universitätsplatz 2, 39106, Magdeburg, Germany,
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28
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Virmani J, Kumar V, Kalra N, Khandelwal N. Neural network ensemble based CAD system for focal liver lesions from B-mode ultrasound. J Digit Imaging 2014; 27:520-37. [PMID: 24687642 PMCID: PMC4090414 DOI: 10.1007/s10278-014-9685-0] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022] Open
Abstract
A neural network ensemble (NNE) based computer-aided diagnostic (CAD) system to assist radiologists in differential diagnosis between focal liver lesions (FLLs), including (1) typical and atypical cases of Cyst, hemangioma (HEM) and metastatic carcinoma (MET) lesions, (2) small and large hepatocellular carcinoma (HCC) lesions, along with (3) normal (NOR) liver tissue is proposed in the present work. Expert radiologists, visualize the textural characteristics of regions inside and outside the lesions to differentiate between different FLLs, accordingly texture features computed from inside lesion regions of interest (IROIs) and texture ratio features computed from IROIs and surrounding lesion regions of interests (SROIs) are taken as input. Principal component analysis (PCA) is used for reducing the dimensionality of the feature space before classifier design. The first step of classification module consists of a five class PCA-NN based primary classifier which yields probability outputs for five liver image classes. The second step of classification module consists of ten binary PCA-NN based secondary classifiers for NOR/Cyst, NOR/HEM, NOR/HCC, NOR/MET, Cyst/HEM, Cyst/HCC, Cyst/MET, HEM/HCC, HEM/MET and HCC/MET classes. The probability outputs of five class PCA-NN based primary classifier is used to determine the first two most probable classes for a test instance, based on which it is directed to the corresponding binary PCA-NN based secondary classifier for crisp classification between two classes. By including the second step of the classification module, classification accuracy increases from 88.7 % to 95 %. The promising results obtained by the proposed system indicate its usefulness to assist radiologists in differential diagnosis of FLLs.
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Affiliation(s)
- Jitendra Virmani
- Department of Electronics and Communication Engineering, Jaypee University of Information Technology, Waknaghat, Solan, 173234 Himachal Pradesh, India,
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29
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Virmani J, Kumar V, Kalra N, Khandelwal N. Characterization of primary and secondary malignant liver lesions from B-mode ultrasound. J Digit Imaging 2014; 26:1058-70. [PMID: 23412917 DOI: 10.1007/s10278-013-9578-7] [Citation(s) in RCA: 47] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023] Open
Abstract
Characterization of hepatocellular carcinomas (HCCs) and metastatic carcinomas (METs) from B-mode ultrasound presents a daunting challenge for radiologists due to their highly overlapping appearances. The differential diagnosis between HCCs and METs is often carried out by observing the texture of regions inside the lesion and the texture of background liver on which the lesion has evolved. The present study investigates the contribution made by texture patterns of regions inside and outside of the lesions for binary classification between HCC and MET lesions. The study is performed on 51 real ultrasound liver images with 54 malignant lesions, i.e., 27 images with 27 solitary HCCs (13 small HCCs and 14 large HCCs) and 24 images with 27 MET lesions (12 typical cases and 15 atypical cases). A total of 120 within-lesion regions of interest and 54 surrounding lesion regions of interest are cropped from 54 lesions. Subsequently, 112 texture features (56 texture features and 56 texture ratio features) are computed by statistical, spectral, and spatial filtering based texture features extraction methods. A two-step methodology is used for feature set optimization, i.e., feature pruning by removal of nondiscriminatory features followed by feature selection by genetic algorithm-support vector machine (SVM) approach. The SVM classifier is designed based on optimum features. The proposed computer-aided diagnostic system achieved the overall classification accuracy of 91.6 % with sensitivity of 90 % and 93.3 % for HCCs and METs, respectively. The promising results obtained by the proposed system indicate its usefulness to assist radiologists in diagnosing liver malignancies.
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Affiliation(s)
- Jitendra Virmani
- Biomedical Instrumentation Laboratory, Department of Electrical Engineering, Indian Institute of Technology Roorkee, Uttarakhand, 247667, India,
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30
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Ribeiro RT, Tato Marinho R, Sanches JM. An Ultrasound-Based Computer-Aided Diagnosis Tool for Steatosis Detection. IEEE J Biomed Health Inform 2014; 18:1397-403. [DOI: 10.1109/jbhi.2013.2284785] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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31
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Virmani J, Kumar V, Kalra N, Khandelwal N. A comparative study of computer-aided classification systems for focal hepatic lesions from B-mode ultrasound. J Med Eng Technol 2013; 37:292-306. [PMID: 23701435 DOI: 10.3109/03091902.2013.794869] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Abstract
A comparative study of three computer-aided classification (CAC) systems for characterization of focal hepatic lesions (FHLs), such as cyst, hemangioma (HEM), hepatocellular carcinoma (HCC) and metastatic carcinoma (MET), along with normal (NOR) liver tissue is carried out in the present work. In order to develop efficient CAC systems a comprehensive and representative dataset consisting of B-mode ultrasound images with (1) typical and atypical cases of cyst, HEM and MET lesions, (2) small and large HCC lesions and (3) NOR liver cases have been used for designing K-nearest neighbour (KNN), probabilistic neural network (PNN) and a back propagation neural network (BPNN) classifiers. For differential diagnosis between atypical FHLs, expert radiologists often visualize the textural characteristics of regions inside and outside the lesion. Accordingly in the present work, texture features and texture ratio features are computed from regions inside and outside the lesions. A feature set consisting of 208 texture features (i.e. 104 texture features and 104 texture ratio features) is subjected to principal component analysis (PCA) for dimensionality reduction; it is observed that maximum accuracy of 87.7% is obtained for a PCA-BPNN-based CAC system in comparison to 86.1% and 85% as obtained by PCA-PNN and PCA-KNN-based CAC systems. The sensitivity of the proposed PCA-BPNN based CAC system for NOR, Cyst, HEM, HCC and MET cases is 82.5%, 96%, 93.3%, 90% and 82.2%, respectively. The sensitivity values with respect to typical, atypical, small HCC and large HCC cases are 85.9%, 88.1%, 100% and 87%, respectively. Keeping in view the comprehensive and representative dataset used for designing the classifier, the results obtained by the proposed PCA-BPNN-based CAC system are quite encouraging and indicate its usefulness to assist experienced radiologists for interpretation and diagnosis of FHLs.
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Affiliation(s)
- Jitendra Virmani
- Indian Institute of Technology -- Roorkee, Roorkee, Uttarakhand, India-247667.
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32
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Ribeiro R, Tato Marinho R, Sanches JM. Global and local detection of liver steatosis from ultrasound. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2012; 2012:6547-6550. [PMID: 23367429 DOI: 10.1109/embc.2012.6347494] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
Liver steatosis is a common disease usually associated with social and genetic factors. Early detection and quantification is important since it can evolve to cirrhosis. Steatosis is usually a diffuse liver disease, since it is globally affected. However, steatosis can also be focal affecting only some foci difficult to discriminate. In both cases, steatosis is detected by laboratorial analysis and visual inspection of ultrasound images of the hepatic parenchyma. Liver biopsy is the most accurate diagnostic method but its invasive nature suggest the use of other non-invasive methods, while visual inspection of the ultrasound images is subjective and prone to error. In this paper a new Computer Aided Diagnosis (CAD) system for steatosis classification and analysis is presented, where the Bayes Factor, obatined from objective intensity and textural features extracted from US images of the liver, is computed in a local or global basis. The main goal is to provide the physician with an application to make it faster and accurate the diagnosis and quantification of steatosis, namely in a screening approach. The results showed an overall accuracy of 93.54% with a sensibility of 95.83% and 85.71% for normal and steatosis class, respectively. The proposed CAD system seemed suitable as a graphical display for steatosis classification and comparison with some of the most recent works in the literature is also presented.
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