Binding of Al(III)-tetracarboxyphthalocyanine to Hemoglobin and Myoglobin

Evaluation of the toxicity of 5-fluorouracil on three digestive enzymes from the view of side effects

Among the side effects of 5-fluorouracil (5-FU), the performance of the gastrointestinal reactions is faster and more obvious than others. In this work, the effects of 5-FU on the activities and conformational structures of the important digestive enzymes including α-amylase, pepsin and trypsin were studied to analyze the mechanism of the gastrointestinal adverse effects causing by 5-FU binding. The results showed that the enzymatic activity of pepsin was obviously reduced by the presence of 5-FU that bound directly to the enzyme activity cavity site. The molecular modeling and fluorescence quenching data indicated that the hydrophobic, polar and hydrogen bonding forces were involved in the ground state complex formation between proteases and 5-FU. In addition, 5-FU changed the tertiary structures of α-amylase, pepsin, and trypsin.

Binding interaction of hypocrellin B to myoglobin: a spectroscopic and computational study

Hypocrellin B (Hyp B), a perylenequinone naturally present in Hypocrella bambusae, is commonly used to treat a variety of diseases. Its versatile role in different biomedical applications necessitates a thorough investigation of its interaction with different biomolecules, particularly enzymes. To address this need, the binding mode of Hyp B to myoglobin (Mb) was studied using UV-visible absorption, emission, and synchronous fluorescence spectroscopies, as well as flexible docking simulations. Analyses of the absorbance and fluorescence data establish that Hyp B quenches tyrosine (Tyr) and tryptophan (Trp) fluorescence via the formation of two unique ground-state complexes on the surface of Mb, with one site being more energetically preferred than the other (the fraction of fluorophores accessible by Hyp B is 0.32). Molecular modeling simulations demonstrate preferential Hyp B binding at the Tyr103 site first, followed by the Trp7 site. In both cases, a ground-state complex is generated through H-bonding interaction between Hyp B and the respective residues, with the Tyr103 complex being more stable than that of the Trp7 complex. Synchronous fluorescence measurements indicate that the microenvironment surrounding Trp7 becomes more hydrophilic upon Hyp B interaction. This is evidenced by a red-shift of the band associated with this residue, while that of Tyr103 remains the same. Electrostatic potential surfaces reveal a more pronounced shift in electron density of Trp7 upon Hyp B binding compared to Tyr103. The binding constant of Hyp B to Mb is 1.21×10(5)M(-1), suggesting a relatively strong interaction between the ligand and enzyme.

Investigation and comparison of bovine hemoglobin binding to Al₁₃ and Al(III): evidences from spectroscopic studies

The UV-vis, steady state/time resolved fluorescence spectroscopy and circular dichroism spectroscopy are employed to investigate the interaction mechanisms of Al(13)-Hb and Al(III)-Hb, respectively. The UV-vis studies represent that Al(13) and Al(III) could directly disturb the structure of Hb and induce the heme group exposed to the aqueous medium. Steady state/time resolved and synchronous fluorescence spectroscopy reveal that Al(13) and Al(III) can change the polarity around the fluorophore molecule of Hb. Al(13) makes the protein unfolding and Al(III) induces the protein buried inside the structure. The interaction processes are static quenching mechanisms and the main forces are electrostatic interactions. Moreover, circular dichroism spectra display Al(13) makes greater effect than Al(III), which is reflected on the degrees of α-helix of Hb. The comparison results suggest that Al(13) displays stronger toxicity.