1
|
Takekiyo T, Yamada S, Uto T, Nakayama M, Hirata T, Ishizaki T, Kuroda K, Yoshimura Y. Protein Cryoprotectant Ability of the Aqueous Zwitterionic Solution. J Phys Chem B 2024; 128:526-535. [PMID: 38176060 DOI: 10.1021/acs.jpcb.3c05614] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2024]
Abstract
Protein cryopreservation is important for the long-term storage of unstable proteins. Recently, we found that N-acetylglucosaminyltransferase-V (GnT-V) can be cryopreserved in a deep freezer without temperature control using a dilute binary aqueous solution of 3-(1-(2-(2-methoxyethoxy)ethyl)imidazol-3-io)butane-1-carboxylate (OE2imC3C) [10 wt %, mole fraction of solute (x) = 7.75 × 10-3], an artificial zwitterion. However, it is unclear which solvent properties are required in these media to preserve unstable proteins, such as GnT-V. In this study, we investigated the melting phenomena and solution structure of dilute binary aqueous OE2imC3C solutions [x = 0-2.96 × 10-2 (0-30 wt %)] using differential scanning calorimetry (DSC) and Raman and Fourier transform infrared (FTIR) spectroscopies combined with molecular dynamics (MD) simulation to compare the cryoprotectant ability of OE2imC3C with two general cryoprotectants (CPAs), glycerol and dimethyl sulfoxide. DSC results indicated that aqueous OE2imC3C solutions can be melted at lower temperatures with less energy than the control CPA solution, with increasing x, primarily due to OE2imC3C having a higher content of unfrozen water molecules. Moreover, Raman and FTIR results showed that the high content of unfrozen water molecules in aqueous OE2imC3C solutions was due to the hydration around the ionic parts (the COO- group and imidazolium ring) and the OCH2CH2O segment. In addition, the MD simulation results showed that there were fewer structured water molecules around the OCH2CH2O segment than the hydration water molecules around the ionic parts. These solvent properties suggest that dilute aqueous OE2imC3C solutions are effective in preventing freezing, even in a deep freezer. Therefore, this medium has the potential to act as a novel cryoprotectant for proteins in biotechnology and biomedical fields.
Collapse
Affiliation(s)
- Takahiro Takekiyo
- Department of Applied Chemistry, National Defense Academy, Yokosuka, Kanagawa 239-8686, Japan
| | - Shuto Yamada
- Department of Applied Chemistry, National Defense Academy, Yokosuka, Kanagawa 239-8686, Japan
| | - Takuya Uto
- Faculty of Engineering, University of Miyazaki, Nishi 1-1 Gakuen Kibanadai, Miyazaki 889-2192, Japan
| | - Masaharu Nakayama
- Department of Applied Chemistry, National Defense Academy, Yokosuka, Kanagawa 239-8686, Japan
| | - Tetsuya Hirata
- Department of Biochemistry, Duke University, School of Medicine, Durham, North Carolina 27710, United States
| | - Takeru Ishizaki
- Institute of Science and Engineering, Kanazawa University, Kakuma-machi, Kanazawa 920-1192, Japan
| | - Kosuke Kuroda
- Institute of Science and Engineering, Kanazawa University, Kakuma-machi, Kanazawa 920-1192, Japan
- NanoMaterials Research Institute, Kanazawa University, Kakuma-machi, Kanazawa 920-1192, Japan
| | - Yukihiro Yoshimura
- Department of Applied Chemistry, National Defense Academy, Yokosuka, Kanagawa 239-8686, Japan
| |
Collapse
|
2
|
Abe H, Yoshiichi Y, Hirano T, Ohkubo T, Kishimura H. Hydrogen bonding of nanoconfined water in ionic liquids. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2022.120383] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
|
3
|
Estimation of the slow hydrogen–deuterium exchange rates for local water confined in 1-butyl-3-methylimidazolium tetrafluoroborate via nuclear magnetic resonance. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2022.120134] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
|
4
|
Abe H, Yoshiichi Y, Kishimura H. Hydrogen/deuterium Exchange in 1-Alkyl-3-methylimidazolium bis(trifluoromethanesulfonyl)imide-based Solutions. Chem Phys 2022. [DOI: 10.1016/j.chemphys.2022.111631] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
|
6
|
Philippi F, Welton T. Targeted modifications in ionic liquids - from understanding to design. Phys Chem Chem Phys 2021; 23:6993-7021. [PMID: 33876073 DOI: 10.1039/d1cp00216c] [Citation(s) in RCA: 56] [Impact Index Per Article: 18.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Ionic liquids are extremely versatile and continue to find new applications in academia as well as industry. This versatility is rooted in the manifold of possible ion types, ion combinations, and ion variations. However, to fully exploit this versatility, it is imperative to understand how the properties of ionic liquids arise from their constituents. In this work, we discuss targeted modifications as a powerful tool to provide understanding and to enable design. A 'targeted modification' is a deliberate change in the structure of an ionic liquid. This includes chemical changes in an experiment as well as changes to the parameterisation in a computer simulation. In any case, such a change must be purposeful to isolate what is of interest, studying, as far as is possible, only one concept at a time. The concepts can then be used as design elements. However, it is often found that several design elements interact with each other - sometimes synergistically, and other times antagonistically. Targeted modifications are a systematic way of navigating these overlaps. We hope this paper shows that understanding ionic liquids requires experimentalists and theoreticians to join forces and provides a tool to tackle the difficult transition from understanding to design.
Collapse
Affiliation(s)
- Frederik Philippi
- Department of Chemistry, Molecular Sciences Research Hub, Imperial College London, White City Campus, London W12 0BZ, UK.
| | | |
Collapse
|
7
|
Shahkhatuni AA, Shahkhatuni AG, Mamyan SS, Ananikov VP, Harutyunyan AS. Proton-deuterium exchange of acetone catalyzed in imidazolium-based ionic liquid-D 2O mixtures. RSC Adv 2020; 10:32485-32489. [PMID: 35516517 PMCID: PMC9056620 DOI: 10.1039/d0ra04206d] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2020] [Accepted: 08/11/2020] [Indexed: 01/31/2023] Open
Abstract
The reaction of the proton-deuterium exchange of acetone in imidazolium-based ionic liquid (IL)-deuterium oxide mixtures was studied in detail via NMR spectroscopy. Certain ILs exhibit considerable catalytic properties and contribute to the course of reaction up to the complete deuteration. The efficiency of deuterium exchange crucially depends on the features of ILs; the type of anion and chain length of cation. The linear secondary isotope effects on the NMR chemical shifts of the 13C atoms in acetone were observed depending on the deuteration level of the molecule.
Collapse
Affiliation(s)
- Astghik A Shahkhatuni
- Molecule Structure Research Center, STCOPC NAS RA Azatutian Ave. 26 Yerevan 0014 Armenia
| | - Aleksan G Shahkhatuni
- Molecule Structure Research Center, STCOPC NAS RA Azatutian Ave. 26 Yerevan 0014 Armenia
| | - Suren S Mamyan
- Molecule Structure Research Center, STCOPC NAS RA Azatutian Ave. 26 Yerevan 0014 Armenia
| | - Valentine P Ananikov
- Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences Leninsky Prospect 47 Moscow 119991 Russian Federation
| | - Arpine S Harutyunyan
- Molecule Structure Research Center, STCOPC NAS RA Azatutian Ave. 26 Yerevan 0014 Armenia
| |
Collapse
|
8
|
|
9
|
Marks C, Mitsos A, Viell J. Change of C(2)-Hydrogen–Deuterium Exchange in Mixtures of EMIMAc. J SOLUTION CHEM 2019. [DOI: 10.1007/s10953-019-00899-7] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
|
10
|
|
11
|
Abe H, Takekiyo T, Aono M, Kishimura H, Yoshimura Y, Hamaya N. Polymorphs in room-temperature ionic liquids: Hierarchical structure, confined water and pressure-induced frustration. J Mol Liq 2015. [DOI: 10.1016/j.molliq.2015.05.057] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
|
12
|
Takekiyo T, Yamaguchi E, Yoshida K, Kato M, Yamaguchi T, Yoshimura Y. Interaction Site between the Protein Aggregates and Thiocyanate Ion in Aqueous Solution: A Case Study of 1-Butyl-3-methylimidazolium Thiocyanate. J Phys Chem B 2015; 119:6536-44. [DOI: 10.1021/acs.jpcb.5b01650] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Takahiro Takekiyo
- Department
of Applied Chemistry, National Defense Academy, 1-10-20 Hashirimizu, Yokosuka, Kanagawa 239-8686, Japan
| | - Erika Yamaguchi
- Department
of Applied Chemistry, National Defense Academy, 1-10-20 Hashirimizu, Yokosuka, Kanagawa 239-8686, Japan
| | - Koji Yoshida
- Department
of Chemistry, Faculty of Science, Fukuoka University, Nanakuma, Jonan-ku, Fukuoka, Fukuoka 814-0810, Japan
| | - Minoru Kato
- Department
of Pharmacy, Ritsumeikan University, 1-1-1 Noji-Higashi, Kusatsu, Shiga 525-8577, Japan
| | - Toshio Yamaguchi
- Department
of Chemistry, Faculty of Science, Fukuoka University, Nanakuma, Jonan-ku, Fukuoka, Fukuoka 814-0810, Japan
| | - Yukihiro Yoshimura
- Department
of Applied Chemistry, National Defense Academy, 1-10-20 Hashirimizu, Yokosuka, Kanagawa 239-8686, Japan
| |
Collapse
|