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For: Miller AD, Good RT, Coleman RA, Lancaster ML, Weeks AR. Microsatellite loci and the complete mitochondrial DNA sequence characterized through next generation sequencing and de novo genome assembly for the critically endangered orange-bellied parrot, Neophema chrysogaster. Mol Biol Rep 2012;40:35-42. [DOI: 10.1007/s11033-012-1950-z] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2012] [Accepted: 10/01/2012] [Indexed: 11/28/2022]
Number Cited by Other Article(s)
1
Rivera-Arroyo RC, Escalante-Pliego P, Aguilar-Torres D, Úbeda-Olivas MF. Phylogeography of the white-crowned parrot (Pionus senilis). BIOTA NEOTROPICA 2022. [DOI: 10.1590/1676-0611-bn-2022-1382] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
2
A Literature Synthesis of Actions to Tackle Illegal Parrot Trade. DIVERSITY 2021. [DOI: 10.3390/d13050191] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
3
Kim JI, Do TD, Choi Y, Yeo Y, Kim CB. Characterization and Comparative Analysis of Complete Mitogenomes of Three Cacatua Parrots (Psittaciformes: Cacatuidae). Genes (Basel) 2021;12:genes12020209. [PMID: 33572592 PMCID: PMC7910981 DOI: 10.3390/genes12020209] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2021] [Revised: 01/26/2021] [Accepted: 01/28/2021] [Indexed: 12/11/2022]  Open
4
Genetic impacts of conservation management actions in a critically endangered parrot species. CONSERV GENET 2020. [DOI: 10.1007/s10592-020-01292-4] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
5
Restrepo-Escobar N, Márquez EJ. Microsatellite loci development for three catfish species from northwestern South America. NEOTROPICAL ICHTHYOLOGY 2020. [DOI: 10.1590/1982-0224-2019-0079] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
6
Kerima OZ, Niranjana P, Vinay Kumar B, Ramachandrappa R, Puttappa S, Lalitha Y, Jalali SK, Ballal CR, Thulasiram HV. De novo transcriptome analysis of the egg parasitoid Trichogramma chilonis Ishii (Hymenoptera: Trichogrammatidae): A biological control agent. GENE REPORTS 2018. [DOI: 10.1016/j.genrep.2018.08.009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
7
Alvarez-Cubero MJ, Saiz M, Martínez-García B, Sayalero SM, Entrala C, Lorente JA, Martinez-Gonzalez LJ. Next generation sequencing: an application in forensic sciences? Ann Hum Biol 2017;44:581-592. [PMID: 28948844 DOI: 10.1080/03014460.2017.1375155] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
8
Rico C, Cuesta JA, Drake P, Macpherson E, Bernatchez L, Marie AD. Null alleles are ubiquitous at microsatellite loci in the Wedge Clam (Donax trunculus). PeerJ 2017;5:e3188. [PMID: 28439464 PMCID: PMC5398275 DOI: 10.7717/peerj.3188] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2016] [Accepted: 03/15/2017] [Indexed: 12/17/2022]  Open
9
Transcriptome Analysis of the Tadpole Shrimp (Triops longicaudatus) by Illumina Paired-End Sequencing: Assembly, Annotation, and Marker Discovery. Genes (Basel) 2016;7:genes7120114. [PMID: 27918468 PMCID: PMC5192490 DOI: 10.3390/genes7120114] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2016] [Revised: 11/19/2016] [Accepted: 11/24/2016] [Indexed: 11/17/2022]  Open
10
Patnaik BB, Hwang HJ, Kang SW, Park SY, Wang TH, Park EB, Chung JM, Song DK, Kim C, Kim S, Lee JB, Jeong HC, Park HS, Han YS, Lee YS. Transcriptome Characterization for Non-Model Endangered Lycaenids, Protantigius superans and Spindasis takanosis, Using Illumina HiSeq 2500 Sequencing. Int J Mol Sci 2015;16:29948-70. [PMID: 26694362 PMCID: PMC4691156 DOI: 10.3390/ijms161226213] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2015] [Revised: 11/28/2015] [Accepted: 12/09/2015] [Indexed: 11/22/2022]  Open
11
Caparroz R, Mantellatto AMB, Bertioli DJ, Figueiredo MG, Duarte JMB. Characterization of the complete mitochondrial genome and a set of polymorphic microsatellite markers through next-generation sequencing for the brown brocket deer Mazama gouazoubira. Genet Mol Biol 2015;38:338-45. [PMID: 26500438 PMCID: PMC4612593 DOI: 10.1590/s1415-475738320140344] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2014] [Accepted: 02/05/2015] [Indexed: 11/22/2022]  Open
12
Hill MP, Hoffmann AA, Umina PA, Cheng X, Miller AD. Genetic analysis along an invasion pathway reveals endemic cryptic taxa, but a single species with little population structure in the introduced range. DIVERS DISTRIB 2015. [DOI: 10.1111/ddi.12385] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]  Open
13
Population genetic diversity and hybrid detection in captive zebras. Sci Rep 2015;5:13171. [PMID: 26294133 PMCID: PMC4544005 DOI: 10.1038/srep13171] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2015] [Accepted: 07/20/2015] [Indexed: 01/24/2023]  Open
14
Eberhard JR, Wright TF. Rearrangement and evolution of mitochondrial genomes in parrots. Mol Phylogenet Evol 2015;94:34-46. [PMID: 26291569 DOI: 10.1016/j.ympev.2015.08.011] [Citation(s) in RCA: 59] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2014] [Revised: 07/15/2015] [Accepted: 08/11/2015] [Indexed: 12/27/2022]
15
Lee JCI, Tseng B, Ho BC, Linacre A. pSTR Finder: a rapid method to discover polymorphic short tandem repeat markers from whole-genome sequences. INVESTIGATIVE GENETICS 2015;6:10. [PMID: 26246889 PMCID: PMC4525727 DOI: 10.1186/s13323-015-0027-x] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 03/18/2015] [Accepted: 07/21/2015] [Indexed: 11/10/2022]
16
Assembly and variation analyses of Clarias batrachus mitogenome retrieved from WGS data and its phylogenetic relationship with other catfishes. Meta Gene 2015;5:105-14. [PMID: 26137446 PMCID: PMC4484717 DOI: 10.1016/j.mgene.2015.06.004] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2015] [Revised: 05/30/2015] [Accepted: 06/07/2015] [Indexed: 11/20/2022]  Open
17
Vartia S, Collins PC, Cross TF, Fitzgerald RD, Gauthier DT, McGinnity P, Mirimin L, Carlsson J. Multiplexing with three-primer PCR for rapid and economical microsatellite validation. Hereditas 2015;151:43-54. [PMID: 25041267 DOI: 10.1111/hrd2.00044] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2014] [Accepted: 03/20/2014] [Indexed: 02/01/2023]  Open
18
MitoPhAST, a new automated mitogenomic phylogeny tool in the post-genomic era with a case study of 89 decapod mitogenomes including eight new freshwater crayfish mitogenomes. Mol Phylogenet Evol 2015;85:180-8. [DOI: 10.1016/j.ympev.2015.02.009] [Citation(s) in RCA: 51] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2014] [Revised: 12/20/2014] [Accepted: 02/13/2015] [Indexed: 11/22/2022]
19
Development of 12 novel polymorphic microsatellite markers using a next generation sequencing approach for Spiculopteragia spiculoptera, a nematode parasite of deer. Mol Biochem Parasitol 2014;196:122-5. [DOI: 10.1016/j.molbiopara.2014.09.004] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2014] [Revised: 09/08/2014] [Accepted: 09/15/2014] [Indexed: 02/04/2023]
20
An alternative suite of universal primers for genotyping in multiplex PCR. PLoS One 2014;9:e92826. [PMID: 24658225 PMCID: PMC3962466 DOI: 10.1371/journal.pone.0092826] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2013] [Accepted: 02/26/2014] [Indexed: 12/02/2022]  Open
21
Characterisation of the complete mitochondrial genome and 13 microsatellite loci through next-generation sequencing for the New Caledonian spider-ant Leptomyrmex pallens. Mol Biol Rep 2014;41:1179-87. [DOI: 10.1007/s11033-013-2657-5] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2012] [Accepted: 08/29/2013] [Indexed: 10/25/2022]
22
Gan HM, Schultz MB, Austin CM. Integrated shotgun sequencing and bioinformatics pipeline allows ultra-fast mitogenome recovery and confirms substantial gene rearrangements in Australian freshwater crayfishes. BMC Evol Biol 2014;14:19. [PMID: 24484414 PMCID: PMC3915555 DOI: 10.1186/1471-2148-14-19] [Citation(s) in RCA: 84] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2013] [Accepted: 01/29/2014] [Indexed: 12/20/2022]  Open
23
Presti FT, Wasko AP. A Review of Microsatellite Markers and their Application on Genetic Diversity Studies in Parrots. ACTA ACUST UNITED AC 2014. [DOI: 10.4236/ojgen.2014.42010] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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