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Zhu D, Wang D, Chen Y, Xu Z, He B. Research on Three-Dimensional Reconstruction of Ribs Based on Point Cloud Adaptive Smoothing Denoising. SENSORS (BASEL, SWITZERLAND) 2024; 24:4076. [PMID: 39000855 PMCID: PMC11244516 DOI: 10.3390/s24134076] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/23/2024] [Revised: 06/09/2024] [Accepted: 06/19/2024] [Indexed: 07/16/2024]
Abstract
The traditional methods for 3D reconstruction mainly involve using image processing techniques or deep learning segmentation models for rib extraction. After post-processing, voxel-based rib reconstruction is achieved. However, these methods suffer from limited reconstruction accuracy and low computational efficiency. To overcome these limitations, this paper proposes a 3D rib reconstruction method based on point cloud adaptive smoothing and denoising. We converted voxel data from CT images to multi-attribute point cloud data. Then, we applied point cloud adaptive smoothing and denoising methods to eliminate noise and non-rib points in the point cloud. Additionally, efficient 3D reconstruction and post-processing techniques were employed to achieve high-accuracy and comprehensive 3D rib reconstruction results. Experimental calculations demonstrated that compared to voxel-based 3D rib reconstruction methods, the 3D rib models generated by the proposed method achieved a 40% improvement in reconstruction accuracy and were twice as efficient as the former.
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Affiliation(s)
- Darong Zhu
- School of Automation (School of Artificial Intelligence), Hangzhou Dianzi University, Hangzhou 310018, China
- Affiliated Hangzhou First People's Hospital, School of Medicine, Westlake University, Hangzhou 310024, China
| | - Diao Wang
- School of Automation (School of Artificial Intelligence), Hangzhou Dianzi University, Hangzhou 310018, China
| | - Yuanjiao Chen
- School of Automation (School of Artificial Intelligence), Hangzhou Dianzi University, Hangzhou 310018, China
| | - Zhe Xu
- School of Automation (School of Artificial Intelligence), Hangzhou Dianzi University, Hangzhou 310018, China
| | - Bishi He
- School of Automation (School of Artificial Intelligence), Hangzhou Dianzi University, Hangzhou 310018, China
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An Q, Chen W, Shao W. A Deep Convolutional Neural Network for Pneumonia Detection in X-ray Images with Attention Ensemble. Diagnostics (Basel) 2024; 14:390. [PMID: 38396430 PMCID: PMC10887593 DOI: 10.3390/diagnostics14040390] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2024] [Revised: 02/07/2024] [Accepted: 02/09/2024] [Indexed: 02/25/2024] Open
Abstract
In the domain of AI-driven healthcare, deep learning models have markedly advanced pneumonia diagnosis through X-ray image analysis, thus indicating a significant stride in the efficacy of medical decision systems. This paper presents a novel approach utilizing a deep convolutional neural network that effectively amalgamates the strengths of EfficientNetB0 and DenseNet121, and it is enhanced by a suite of attention mechanisms for refined pneumonia image classification. Leveraging pre-trained models, our network employs multi-head, self-attention modules for meticulous feature extraction from X-ray images. The model's integration and processing efficiency are further augmented by a channel-attention-based feature fusion strategy, one that is complemented by a residual block and an attention-augmented feature enhancement and dynamic pooling strategy. Our used dataset, which comprises a comprehensive collection of chest X-ray images, represents both healthy individuals and those affected by pneumonia, and it serves as the foundation for this research. This study delves deep into the algorithms, architectural details, and operational intricacies of the proposed model. The empirical outcomes of our model are noteworthy, with an exceptional performance marked by an accuracy of 95.19%, a precision of 98.38%, a recall of 93.84%, an F1 score of 96.06%, a specificity of 97.43%, and an AUC of 0.9564 on the test dataset. These results not only affirm the model's high diagnostic accuracy, but also highlight its promising potential for real-world clinical deployment.
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Affiliation(s)
- Qiuyu An
- School of Computer Science, Nanjing University of Posts and Telecommunications, Nanjing 210023, China;
| | - Wei Chen
- School of Computer Science, Nanjing University of Posts and Telecommunications, Nanjing 210023, China;
| | - Wei Shao
- Nanjing University of Aeronautics and Astronautics Shenzhen Research Institute, Shenzhen 518067, China
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Lasker A, Ghosh M, Obaidullah SM, Chakraborty C, Roy K. LWSNet - a novel deep-learning architecture to segregate Covid-19 and pneumonia from x-ray imagery. MULTIMEDIA TOOLS AND APPLICATIONS 2022; 82:21801-21823. [PMID: 36532598 PMCID: PMC9734972 DOI: 10.1007/s11042-022-14247-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/06/2022] [Revised: 08/18/2022] [Accepted: 11/04/2022] [Indexed: 05/27/2023]
Abstract
Automatic detection of lung diseases using AI-based tools became very much necessary to handle the huge number of cases occurring across the globe and support the doctors. This paper proposed a novel deep learning architecture named LWSNet (Light Weight Stacking Network) to separate Covid-19, cold pneumonia, and normal chest x-ray images. This framework is based on single, double, triple, and quadruple stack mechanisms to address the above-mentioned tri-class problem. In this framework, a truncated version of standard deep learning models and a lightweight CNN model was considered to conviniently deploy in resource-constraint devices. An evaluation was conducted on three publicly available datasets alongwith their combination. We received 97.28%, 96.50%, 97.41%, and 98.54% highest classification accuracies using quadruple stack. On further investigation, we found, using LWSNet, the average accuracy got improved from individual model to quadruple model by 2.31%, 2.55%, 2.88%, and 2.26% on four respective datasets.
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Affiliation(s)
- Asifuzzaman Lasker
- Department of Computer Science & Engineering, Aliah University, Kolkata, India
| | - Mridul Ghosh
- Department of Computer Science, Shyampur Siddheswari Mahavidyalaya, Howrah, India
| | - Sk Md Obaidullah
- Department of Computer Science & Engineering, Aliah University, Kolkata, India
| | | | - Kaushik Roy
- Department of Computer Science, West Bengal State University, Barasat, India
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Lasker A, Ghosh M, Obaidullah SM, Chakraborty C, Roy K. LWSNet - a novel deep-learning architecture to segregate Covid-19 and pneumonia from x-ray imagery. MULTIMEDIA TOOLS AND APPLICATIONS 2022; 82:1-23. [PMID: 36532598 DOI: 10.1007/s11042-022-13740-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2022] [Revised: 08/18/2022] [Accepted: 11/04/2022] [Indexed: 05/23/2023]
Abstract
Automatic detection of lung diseases using AI-based tools became very much necessary to handle the huge number of cases occurring across the globe and support the doctors. This paper proposed a novel deep learning architecture named LWSNet (Light Weight Stacking Network) to separate Covid-19, cold pneumonia, and normal chest x-ray images. This framework is based on single, double, triple, and quadruple stack mechanisms to address the above-mentioned tri-class problem. In this framework, a truncated version of standard deep learning models and a lightweight CNN model was considered to conviniently deploy in resource-constraint devices. An evaluation was conducted on three publicly available datasets alongwith their combination. We received 97.28%, 96.50%, 97.41%, and 98.54% highest classification accuracies using quadruple stack. On further investigation, we found, using LWSNet, the average accuracy got improved from individual model to quadruple model by 2.31%, 2.55%, 2.88%, and 2.26% on four respective datasets.
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Affiliation(s)
- Asifuzzaman Lasker
- Department of Computer Science & Engineering, Aliah University, Kolkata, India
| | - Mridul Ghosh
- Department of Computer Science, Shyampur Siddheswari Mahavidyalaya, Howrah, India
| | - Sk Md Obaidullah
- Department of Computer Science & Engineering, Aliah University, Kolkata, India
| | | | - Kaushik Roy
- Department of Computer Science, West Bengal State University, Barasat, India
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Jangam E, Annavarapu CSR, Barreto AAD. A multi-class classification framework for disease screening and disease diagnosis of COVID-19 from chest X-ray images. MULTIMEDIA TOOLS AND APPLICATIONS 2022; 82:14367-14401. [PMID: 36157353 PMCID: PMC9490695 DOI: 10.1007/s11042-022-13710-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/14/2021] [Revised: 05/05/2022] [Accepted: 08/24/2022] [Indexed: 06/16/2023]
Abstract
To accurately diagnose multiple lung diseases from chest X-rays, the critical aspect is to identify lung diseases with high sensitivity and specificity. This study proposed a novel multi-class classification framework that minimises either false positives or false negatives that is useful in computer aided diagnosis or computer aided detection respectively. To minimise false positives or false negatives, we generated respective stacked ensemble from pre-trained models and fully connected layers using selection metric and systematic method. The diversity of base classifiers was based on diverse set of false positives or false negatives generated. The proposed multi-class framework was evaluated on two chest X-ray datasets, and the performance was compared with the existing models and base classifiers. Moreover, we used LIME (Local Interpretable Model-agnostic Explanations) to locate the regions focused by the multi-class classification framework.
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Affiliation(s)
- Ebenezer Jangam
- Department of Information Technology, Velagapudi Ramakrishna Siddhartha Engineering College, Vijayawada, Andhra Pradesh India
- Department of Computer Science Engineering, Indian Institute of Technology(ISM), Dhanbad, Jharkhand India
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Malik H, Anees T, Din M, Naeem A. CDC_Net: multi-classification convolutional neural network model for detection of COVID-19, pneumothorax, pneumonia, lung Cancer, and tuberculosis using chest X-rays. MULTIMEDIA TOOLS AND APPLICATIONS 2022; 82:13855-13880. [PMID: 36157356 PMCID: PMC9485026 DOI: 10.1007/s11042-022-13843-7] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2022] [Revised: 06/30/2022] [Accepted: 09/06/2022] [Indexed: 05/27/2023]
Abstract
Coronavirus (COVID-19) has adversely harmed the healthcare system and economy throughout the world. COVID-19 has similar symptoms as other chest disorders such as lung cancer (LC), pneumothorax, tuberculosis (TB), and pneumonia, which might mislead the clinical professionals in detecting a new variant of flu called coronavirus. This motivates us to design a model to classify multi-chest infections. A chest x-ray is the most ubiquitous disease diagnosis process in medical practice. As a result, chest x-ray examinations are the primary diagnostic tool for all of these chest infections. For the sake of saving human lives, paramedics and researchers are working tirelessly to establish a precise and reliable method for diagnosing the disease COVID-19 at an early stage. However, COVID-19's medical diagnosis is exceedingly idiosyncratic and varied. A multi-classification method based on the deep learning (DL) model is developed and tested in this work to automatically classify the COVID-19, LC, pneumothorax, TB, and pneumonia from chest x-ray images. COVID-19 and other chest tract disorders are diagnosed using a convolutional neural network (CNN) model called CDC Net that incorporates residual network thoughts and dilated convolution. For this study, we used this model in conjunction with publically available benchmark data to identify these diseases. For the first time, a single deep learning model has been used to diagnose five different chest ailments. In terms of classification accuracy, recall, precision, and f1-score, we compared the proposed model to three CNN-based pre-trained models, such as Vgg-19, ResNet-50, and inception v3. An AUC of 0.9953 was attained by the CDC Net when it came to identifying various chest diseases (with an accuracy of 99.39%, a recall of 98.13%, and a precision of 99.42%). Moreover, CNN-based pre-trained models Vgg-19, ResNet-50, and inception v3 achieved accuracy in classifying multi-chest diseases are 95.61%, 96.15%, and 95.16%, respectively. Using chest x-rays, the proposed model was found to be highly accurate in diagnosing chest diseases. Based on our testing data set, the proposed model shows significant performance as compared to its competitor methods. Statistical analyses of the datasets using McNemar's, and ANOVA tests also showed the robustness of the proposed model.
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Affiliation(s)
- Hassaan Malik
- Department of Computer Science, University of Management and Technology, Lahore, 54000 Pakistan
| | - Tayyaba Anees
- Department of Software Engineering, University of Management and Technology, Lahore, 54000 Pakistan
| | - Muizzud Din
- Department of Computer Science, Ghazi University, Dera Ghazi Khan, 32200 Pakistan
| | - Ahmad Naeem
- Department of Computer Science, University of Management and Technology, Lahore, 54000 Pakistan
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Pandey M, Gupta A. Tumorous kidney segmentation in abdominal CT images using active contour and 3D-UNet. Ir J Med Sci 2022:10.1007/s11845-022-03113-8. [PMID: 35930139 DOI: 10.1007/s11845-022-03113-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2022] [Accepted: 07/20/2022] [Indexed: 11/29/2022]
Abstract
BACKGROUND AND PURPOSE The precise segmentation of the kidneys in computed tomography (CT) images is vital in urology for diagnosis, treatment, and surgical planning. Medical experts can get assistance through segmentation, as it provides information about kidney malformations in terms of shape and size. Manual segmentation is slow, tedious, and not reproducible. An automatic computer-aided system is a solution to this problem. This paper presents an automated kidney segmentation technique based on active contour and deep learning. MATERIALS AND METHODS In this work, 210 CTs from the KiTS 19 repository were used. The used dataset was divided into a train set (168 CTs), test set (21 CTs), and validation set (21 CTs). The suggested technique has broadly four phases: (1) extraction of kidney regions using active contours, (2) preprocessing, (3) kidney segmentation using 3D U-Net, and (4) reconstruction of the segmented CT images. RESULTS The proposed segmentation method has received the Dice score of 97.62%, Jaccard index of 95.74%, average sensitivity of 98.28%, specificity of 99.95%, and accuracy of 99.93% over the validation dataset. CONCLUSION The proposed method can efficiently solve the problem of tumorous kidney segmentation in CT images by using active contour and deep learning. The active contour was used to select kidney regions and 3D-UNet was used for precisely segmenting the tumorous kidney.
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Affiliation(s)
- Mohit Pandey
- School of Computer Science & Engineering, Shri Mata Vaishno Devi University, Kakryal, Katra-182320, Jammu & Kashmir, India
| | - Abhishek Gupta
- School of Computer Science & Engineering, Shri Mata Vaishno Devi University, Kakryal, Katra-182320, Jammu & Kashmir, India.
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