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Sallembien Q, Bouteiller L, Crassous J, Raynal M. Possible chemical and physical scenarios towards biological homochirality. Chem Soc Rev 2022; 51:3436-3476. [PMID: 35377372 DOI: 10.1039/d1cs01179k] [Citation(s) in RCA: 32] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
The single chirality of biological molecules in terrestrial biology raises more questions than certitudes about its origin. The emergence of biological homochirality (BH) and its connection with the appearance of life have elicited a large number of theories related to the generation, amplification and preservation of a chiral bias in molecules of life under prebiotically relevant conditions. However, a global scenario is still lacking. Here, the possibility of inducing a significant chiral bias "from scratch", i.e. in the absence of pre-existing enantiomerically-enriched chemical species, will be considered first. It includes phenomena that are inherent to the nature of matter itself, such as the infinitesimal energy difference between enantiomers as a result of violation of parity in certain fundamental interactions, and physicochemical processes related to interactions between chiral organic molecules and physical fields, polarized particles, polarized spins and chiral surfaces. The spontaneous emergence of chirality in the absence of detectable chiral physical and chemical sources has recently undergone significant advances thanks to the deracemization of conglomerates through Viedma ripening and asymmetric auto-catalysis with the Soai reaction. All these phenomena are commonly discussed as plausible sources of asymmetry under prebiotic conditions and are potentially accountable for the primeval chiral bias in molecules of life. Then, several scenarios will be discussed that are aimed to reflect the different debates about the emergence of BH: extra-terrestrial or terrestrial origin (where?), nature of the mechanisms leading to the propagation and enhancement of the primeval chiral bias (how?) and temporal sequence between chemical homochirality, BH and life emergence (when?). Intense and ongoing theories regarding the emergence of optically pure molecules at different moments of the evolution process towards life, i.e. at the levels of building blocks of Life, of the instructed or functional polymers, or even later at the stage of more elaborated chemical systems, will be critically discussed. The underlying principles and the experimental evidence will be commented for each scenario with particular attention on those leading to the induction and enhancement of enantiomeric excesses in proteinogenic amino acids, natural sugars, and their intermediates or derivatives. The aim of this review is to propose an updated and timely synopsis in order to stimulate new efforts in this interdisciplinary field.
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Affiliation(s)
- Quentin Sallembien
- Sorbonne Université, CNRS, Institut Parisien de Chimie Moléculaire, Equipe Chimie des Polymères, 4 Place Jussieu, 75005 Paris, France.
| | - Laurent Bouteiller
- Sorbonne Université, CNRS, Institut Parisien de Chimie Moléculaire, Equipe Chimie des Polymères, 4 Place Jussieu, 75005 Paris, France.
| | - Jeanne Crassous
- Univ Rennes, CNRS, Institut des Sciences Chimiques de Rennes, ISCR-UMR 6226, F-35000 Rennes, France.
| | - Matthieu Raynal
- Sorbonne Université, CNRS, Institut Parisien de Chimie Moléculaire, Equipe Chimie des Polymères, 4 Place Jussieu, 75005 Paris, France.
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Shapshak P. Neutrino communication, intergalactic transit, and Astrobiology. Bioinformation 2022; 18:72-75. [PMID: 36420431 PMCID: PMC9649493 DOI: 10.6026/97320630018072] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2021] [Revised: 01/02/2022] [Accepted: 01/02/2022] [Indexed: 10/10/2023] Open
Abstract
This is a brief summary, snapshot, of a few issues that relate to possible communication with Extraterrestrial Intelligence (ETI) using neutrinos. Essentially, more research is required to better understand possible detection and communication with intelligent life (Astrobiology and ETI). Because of the possible scarcity of life in any single galaxy, to enhance the possibility of life detection, inter-galactic transit neutrinos necessitate consideration. Neutrino-based potential communications are inferred as the optimal mechanism or venue for detection of communications from ETI as well as sending communications to ETI. A paradox exists within this central theme. On the one hand, neutrino technology should be further developed and used to receive signals from or to send signals to ETI, because they transit inter-galactic distances. On the other hand, however, neutrinos have a very low cross-section interaction and are very difficult to detect. This concise Editorial incorporates several diverse research areas. Various issues are briefly and conjointly mentioned to inform the reader of multiple fields required towards a deeper understanding of astrobiology, astro virology, and ETI. This understanding is required for future advances, just as innovations in classical physics, quantum mechanics, particle physics, biophysics, chemistry, biochemistry, and molecular biology were required for the breakthroughs and advances in biology and virology, from the last century to the present - thus, the need for innovations and applications in neutrino particle physics research.
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Affiliation(s)
- Paul Shapshak
- Division of Infectious Diseases and International Health, Tampa General Hospital, Department of Internal Medicine, University of South Florida, Morsani College of Medicine, Tampa, FL 33606, USA
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Santos ACL, Muniz CR, Oliveira LT, Souza JT. Contributions of a modified electrodynamics to the molecular biochirality. Chirality 2020; 32:1186-1190. [PMID: 32627234 DOI: 10.1002/chir.23266] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2020] [Revised: 06/01/2020] [Accepted: 06/18/2020] [Indexed: 11/08/2022]
Abstract
In this paper, we investigate the physical basis behind the molecular biochirality from the computation of a parity violation energy difference (PVED) in enantiomers of organic molecules (e.g., amino acids, which occur as levogyrous-type in nature), by considering the influence of fundamental interactions beyond the standard model of elementary particles and interactions. Particularly, we study the role of a 4-D Chern-Simons theory at the origin of this PVED, the Carroll-Field-Jackiw electrodynamics, which violates both Lorentz and parity symmetries. Then, we consider terrestrial and Jovian scenarios where the influence of a modified (effective) magnetic field generated by the planets on the molecules is taken into account in the calculation of PVED. Besides this quantity, we also calculate the relative quantity excess of an enantiomer over the other in a thermal bath. Finally, we compare the obtained results with those ones from other models based on fundamental interactions.
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Affiliation(s)
- Alana C L Santos
- Faculdade de Educação, Ciências e Letras de Iguatu, Universidade Estadual do Ceará, Iguatu, Brazil
| | - Celio R Muniz
- Faculdade de Educação, Ciências e Letras de Iguatu, Universidade Estadual do Ceará, Iguatu, Brazil
| | - Leonardo T Oliveira
- Faculdade de Educação, Ciências e Letras de Iguatu, Universidade Estadual do Ceará, Iguatu, Brazil
| | - Jefferson T Souza
- Faculdade de Educação, Ciências e Letras de Iguatu, Universidade Estadual do Ceará, Iguatu, Brazil
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Abstract
In this brief review, possible mechanisms which could lead to complete biological homochirality are discussed from the viewpoint of fundamental physics. In particular, the role played by electroweak parity violation, including neutrino-induced homochirality, and contributions from the gravitational interaction, will be emphasized.
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Questions of Mirror Symmetry at the Photoexcited and Ground States of Non-Rigid Luminophores Raised by Circularly Polarized Luminescence and Circular Dichroism Spectroscopy. Part 2: Perylenes, BODIPYs, Molecular Scintillators, Coumarins, Rhodamine B, and DCM. Symmetry (Basel) 2019. [DOI: 10.3390/sym11030363] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
We investigated whether semi-rigid and non-rigid π-conjugated fluorophores in the photoexcited (S1) and ground (S0) states exhibited mirror symmetry by circularly polarized luminescence (CPL) and circular dichroism (CD) spectroscopy using a range of compounds dissolved in achiral liquids. The fluorophores tested were six perylenes, six scintillators, 11 coumarins, two pyrromethene difluoroborates (BODIPYs), rhodamine B (RhB), and 4-(dicyanomethylene)-2-methyl-6-(4-dimethylaminostyryl)-4H-pyran (DCM). All the fluorophores showed negative-sign CPL signals in the ultraviolet (UV)–visible region, suggesting energetically non-equivalent and non-mirror image structures in the S1 state. The dissymmetry ratio of the CPL (glum) increased discontinuously from approximately −0.2 × 10−3 to −2.0 × 10−3, as the viscosity of the liquids increased. Among these liquids, C2-symmetrical stilbene 420 showed glum ≈ −0.5 × 10−3 at 408 nm in H2O and D2O, while, in a viscous alkanediol, the signal was amplified to glum ≈ −2.0 × 10−3. Moreover, BODIPYs, RhB, and DCM in the S0 states revealed weak (−)-sign CD signals with dissymmetry ratios (gabs) ≈ −1.4 × 10−5 at λmax/λext. The origin of the (−)-sign CPL and the (−)-sign CD signals may arise from an electroweak charge at the polyatomic level. Our CPL and CD spectral analysis could be a possible answer to the molecular parity violation hypothesis based on a weak neutral current of Z0 boson origin that could connect to the origin of biomolecular handedness.
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Fujiki M, Koe JR, Mori T, Kimura Y. Questions of Mirror Symmetry at the Photoexcited and Ground States of Non-Rigid Luminophores Raised by Circularly Polarized Luminescence and Circular Dichroism Spectroscopy: Part 1. Oligofluorenes, Oligophenylenes, Binaphthyls and Fused Aromatics. Molecules 2018; 23:E2606. [PMID: 30314330 PMCID: PMC6222818 DOI: 10.3390/molecules23102606] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2018] [Revised: 10/01/2018] [Accepted: 10/06/2018] [Indexed: 11/17/2022] Open
Abstract
We report experimental tests of whether non-rigid, π-conjugated luminophores in the photoexcited (S₁) and ground (S₀) states dissolved in achiral liquids are mirror symmetrical by means of circularly polarized luminescence (CPL) and circular dichroism (CD) spectroscopy. Herein, we chose ten oligofluorenes, eleven linear/cyclic oligo-p-arylenes, three binaphthyls and five fused aromatics, substituted with alkyl, alkoxy, phenyl and phenylethynyl groups and also with no substituents. Without exception, all these non-rigid luminophores showed negative-sign CPL signals in the UV-visible region, suggesting temporal generation of energetically non-equivalent non-mirror image structures as far-from equilibrium open-flow systems at the S₁ state. For comparison, unsubstituted naphthalene, anthracene, tetracene and pyrene, which are achiral, rigid, planar luminophores, did not obviously show CPL/CD signals. However, camphor, which is a rigid chiral luminophore, showed mirror-image CPL/CD signals. The dissymmetry ratio of CPL (glum) for the oligofluorenes increased discontinuously, ranging from ≈ -(0.2 to 2.0) × 10-3, when the viscosity of the liquids increased. When the fluorene ring number increased, the glum value extrapolated at [η] = 0 reached -0.8 × 10-3 at 420 nm, leading to (⁻)-CPL signals predicted in the vacuum state. Our comprehensive CPL and CD study should provide a possible answer to the molecular parity violation hypothesis arising due to the weak neutral current mediated by the Z⁰-boson.
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Affiliation(s)
- Michiya Fujiki
- Division of Materials Science, Graduate School of Science and Technology, Nara Institute of Science and Technology (NAIST), 8916-5 Takayama, Ikoma, Nara 630-0036, Japan.
| | - Julian R Koe
- Department of Natural Sciences, International Christian University (ICU), 3-10-2 Mitaka, Tokyo, 181-8585, Japan.
| | - Takashi Mori
- Division of Materials Science, Graduate School of Science and Technology, Nara Institute of Science and Technology (NAIST), 8916-5 Takayama, Ikoma, Nara 630-0036, Japan.
| | - Yoshihiro Kimura
- Division of Materials Science, Graduate School of Science and Technology, Nara Institute of Science and Technology (NAIST), 8916-5 Takayama, Ikoma, Nara 630-0036, Japan.
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Famiano MA, Boyd RN, Kajino T, Onaka T. Selection of Amino Acid Chirality via Neutrino Interactions with 14N in Crossed Electric and Magnetic Fields. ASTROBIOLOGY 2018; 18:190-206. [PMID: 29160728 PMCID: PMC5820686 DOI: 10.1089/ast.2017.1686] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/02/2017] [Accepted: 09/03/2017] [Indexed: 05/09/2023]
Abstract
Previous work has suggested that the chirality of the amino acids could be established in the magnetic field of a nascent neutron star from a core-collapse supernova or massive collapsar. The magnetic field would orient the 14N nuclei, and the alignment of its nuclear spin with respect to those of the electron antineutrinos emitted from the collapsing star would determine the probability of destruction of the 14N nuclei by interactions with the antineutrinos. Subsequent work estimated the bulk polarization of the 14N nuclei in large rotating meteoroids in such an environment. The present work adds a crucial piece of this model by describing the details by which the selective 14N nuclear destruction would produce molecular chiral selectivity. The effects of the neutrino-induced interactions on the 14N nuclei bound in amino acids polarized in strong magnetic fields are studied. It is shown that electric fields in the reference frame of the nuclei modify the magnetic field at the nucleus, creating nuclear magnetizations that are asymmetric in chirality. The antineutrino cross sections depend on this magnetization, creating a selective destructive effect. The environmental conditions and sites in which such a selection mechanism could occur are discussed. Selective destruction of D-enantiomers results in enantiomeric excesses which may be sufficient to drive subsequent autocatalysis necessary to produce the few-percent enantiomeric excesses found in meteorites and subsequent homochirality. Molecular quantum chemical calculations were performed for alanine, and the chirality-dependent effects studied were included. A preference for left-handed molecules was found, and enantiomeric excesses as high as 0.02% were estimated for molecules in the electromagnetic conditions expected from a core-collapse supernova. Key Words: Amino acids-Supernovae-Antineutrinos-Enantiomeric excess-Chirality. Astrobiology 18, 190-206.
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Affiliation(s)
- Michael A. Famiano
- Department of Physics and Joint Institute for Nuclear Astrophysics, Western Michigan University, Kalamazoo, Michigan, USA
- National Astronomical Observatory of Japan, Tokyo, Japan
| | - Richard N. Boyd
- National Astronomical Observatory of Japan, Tokyo, Japan
- Department of Physics, Department of Astronomy, The Ohio State University, Columbus, Ohio, USA
| | - Toshitaka Kajino
- National Astronomical Observatory of Japan, Tokyo, Japan
- Department of Astronomy, Graduate School of Science, University of Tokyo, Tokyo, Japan
- School of Physics and Nuclear Energy Engineering, Beihang University (Beijing University of Aeronautics and Astronautics), Beijing, P.R. China
| | - Takashi Onaka
- Department of Astronomy, Graduate School of Science, University of Tokyo, Tokyo, Japan
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Bargueño P. Chirality and Gravitational Parity Violation. Chirality 2015; 27:375-81. [DOI: 10.1002/chir.22439] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2014] [Revised: 02/16/2015] [Accepted: 02/18/2015] [Indexed: 11/07/2022]
Affiliation(s)
- Pedro Bargueño
- Departamento de Física; Universidad de los Andes; Apartado Aéreo Bogotá Distrito Capital Colombia
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Determining Amino Acid Chirality in the Supernova Neutrino Processing Model. Symmetry (Basel) 2014. [DOI: 10.3390/sym6040909] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
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Boyd RN, Kajino T, Onaka T. Supernovae, neutrinos and the chirality of amino acids. Int J Mol Sci 2011; 12:3432-44. [PMID: 21747686 PMCID: PMC3131570 DOI: 10.3390/ijms12063432] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2011] [Revised: 05/12/2011] [Accepted: 05/20/2011] [Indexed: 11/16/2022] Open
Abstract
A mechanism for creating an enantioenrichment in the amino acids, the building blocks of the proteins, that involves global selection of one handedness by interactions between the amino acids and neutrinos from core-collapse supernovae is defined. The chiral selection involves the dependence of the interaction cross sections on the orientations of the spins of the neutrinos and the (14)N nuclei in the amino acids, or in precursor molecules, which in turn couple to the molecular chirality. It also requires an asymmetric distribution of neutrinos emitted from the supernova. The subsequent chemical evolution and galactic mixing would ultimately populate the Galaxy with the selected species. The resulting amino acids could either be the source thereof on Earth, or could have triggered the chirality that was ultimately achieved for Earth's proteinaceous amino acids.
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Affiliation(s)
- Richard N. Boyd
- Lawrence Livermore National Laboratory, Livermore, CA 94550, USA
| | - Toshitaka Kajino
- National Astronomical Observatory of Japan, 2-21-1 Mitaka, Tokyo 181-8588, Japan; E-Mail:
- Department of Astronomy, Graduate School of Science, University of Tokyo 7-3-1, Hongo, Bunkyo-ku, Tokyo 113-0033, Japan; E-Mail:
| | - Takashi Onaka
- Department of Astronomy, Graduate School of Science, University of Tokyo 7-3-1, Hongo, Bunkyo-ku, Tokyo 113-0033, Japan; E-Mail:
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Abstract
A mechanism for creating amino acid enantiomerism that always selects the same large-scale chirality is identified, and subsequent chemical replication and galactic mixing that would populate the Galaxy with the predominant species is described. This involves (1) the spin of the 14N in the amino acids, or in precursor molecules from which amino acids might be formed, that couples to the chirality of the molecules; (2) the neutrinos emitted from the supernova, together with the magnetic field from the nascent neutron star or black hole formed from the supernova, which selectively destroy one orientation of the 14N and thus select the chirality associated with the other 14N orientation; (3) chemical evolution, by which the molecules replicate and evolve to more complex forms of a single chirality on a relatively short timescale; and (4) galactic mixing on a longer timescale that mixes the selected molecules throughout the Galaxy.
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Affiliation(s)
- R N Boyd
- Lawrence Livermore National Laboratory, Livermore, California 94551, USA.
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Gusev GA, Saito T, Tsarev VA, Uryson AV. A relativistic neutron fireball from a supernova explosion as a possible source of chiral influence. ORIGINS LIFE EVOL B 2007; 37:259-66. [PMID: 17340212 DOI: 10.1007/s11084-007-9066-5] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2006] [Accepted: 01/25/2007] [Indexed: 10/23/2022]
Abstract
We elaborate on a previously proposed idea that polarized electrons produced from neutrons, released in a supernova (SN) explosion, can cause chiral dissymmetry of molecules in interstellar gas-dust clouds. A specific physical mechanism of a relativistic neutron fireball with Lorentz factor of the order of 100 is assumed for propelling a great number of free neutrons outside the dense SN shell. A relativistic chiral electron-proton plasma, produced from neutron decays, is slowed down owing to collective effects in the interstellar plasma. As collective effects do not involve the particle spin, the electrons can carry their helicities to the cloud. The estimates show high chiral efficiency of such electrons. In addition to this mechanism, production of circularly polarized ultraviolet photons through polarized-electron bremsstrahlung at an early stage of the fireball evolution is considered. It is shown that these photons can escape from the fireball plasma. However, for an average density of neutrals in the interstellar medium of the order of 0.2 cm(-3) and at distances of the order of 10 pc from the SN, these photons will be absorbed with a factor of about 10(-7) due to the photoeffect. In this case, their chiral efficiency will be about five orders of magnitude less than that for polarized electrons.
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Affiliation(s)
- G A Gusev
- P. N. Lebedev Physical Institute, Russian Academy of Sciences, Leninsky pr. 53, Moscow, Russia
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