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Sivaev IB. Bis(Dicarbollide) Complexes of Transition Metals: How Substituents in Dicarbollide Ligands Affect the Geometry and Properties of the Complexes. Molecules 2024; 29:3510. [PMID: 39124915 PMCID: PMC11314212 DOI: 10.3390/molecules29153510] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2024] [Revised: 07/23/2024] [Accepted: 07/23/2024] [Indexed: 08/12/2024] Open
Abstract
The interaction between different types of substituents in dicarbollide ligands and their influence on the stabilization of various rotational conformers (rotamers) of transition metal bis(dicarbollide) complexes [3,3'-M(1,2-C2B9H11)2]- are considered. It has been shown that the formation of intramolecular CH···X hydrogen bonds between dicarbollide ligands is determined by the size of the proton acceptor atom X rather than its electronegativity. Due to the stabilization of rotamers with different dipole moments, intramolecular hydrogen bonds between ligands in transition metal bis(dicarbollide) complexes can have a significant impact on the biological properties of their derivatives. In the presence of external complexing metals, weak intramolecular CH···X hydrogen bonds can be broken to form stronger X->M donor-acceptor bonds. This process is accompanied by the mutual rotation of dicarbollide ligands and can be used in sensors and molecular switches based on transition metal bis(dicarbollide) complexes.
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Affiliation(s)
- Igor B Sivaev
- A. N. Nesmeyanov Institute of Organoelement Compounds, 28 Vavilov Str., Moscow 119991, Russia
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Pazderová L, Tüzün EZ, Bavol D, Litecká M, Fojt L, Grűner B. Chemistry of Carbon-Substituted Derivatives of Cobalt Bis(dicarbollide)(1 -) Ion and Recent Progress in Boron Substitution. Molecules 2023; 28:6971. [PMID: 37836814 PMCID: PMC10574808 DOI: 10.3390/molecules28196971] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2023] [Revised: 09/27/2023] [Accepted: 10/03/2023] [Indexed: 10/15/2023] Open
Abstract
The cobalt bis(dicarbollide)(1-) anion (1-), [(1,2-C2B9H11)2-3,3'-Co(III)](1-), plays an increasingly important role in material science and medicine due to its high chemical stability, 3D shape, aromaticity, diamagnetic character, ability to penetrate cells, and low cytotoxicity. A key factor enabling the incorporation of this ion into larger organic molecules, biomolecules, and materials, as well as its capacity for "tuning" interactions with therapeutic targets, is the availability of synthetic routes that enable easy modifications with a wide selection of functional groups. Regarding the modification of the dicarbollide cage, syntheses leading to substitutions on boron atoms are better established. These methods primarily involve ring cleavage of the ether rings in species containing an oxonium oxygen atom connected to the B(8) site. These pathways are accessible with a broad range of nucleophiles. In contrast, the chemistry on carbon vertices has remained less elaborated over the previous decades due to a lack of reliable methods that permit direct and straightforward cage modifications. In this review, we present a survey of methods based on metalation reactions on the acidic C-H vertices, followed by reactions with electrophiles, which have gained importance in only the last decade. These methods now represent the primary trends in the modifications of cage carbon atoms. We discuss the scope of currently available approaches, along with the stereochemistry of reactions, chirality of some products, available types of functional groups, and their applications in designing unconventional drugs. This content is complemented with a report of the progress in physicochemical and biological studies on the parent cobalt bis(dicarbollide) ion and also includes an overview of recent syntheses and emerging applications of boron-substituted compounds.
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Affiliation(s)
- Lucia Pazderová
- Institute of Inorganic Chemistry of the Czech Academy of Sciences, 250 68 Řež, Czech Republic; (L.P.); (E.Z.T.); (D.B.); (M.L.)
| | - Ece Zeynep Tüzün
- Institute of Inorganic Chemistry of the Czech Academy of Sciences, 250 68 Řež, Czech Republic; (L.P.); (E.Z.T.); (D.B.); (M.L.)
- Department of Inorganic Chemistry, Faculty of Natural Science, Charles University, Hlavova 2030/8, 128 43 Prague, Czech Republic
| | - Dmytro Bavol
- Institute of Inorganic Chemistry of the Czech Academy of Sciences, 250 68 Řež, Czech Republic; (L.P.); (E.Z.T.); (D.B.); (M.L.)
| | - Miroslava Litecká
- Institute of Inorganic Chemistry of the Czech Academy of Sciences, 250 68 Řež, Czech Republic; (L.P.); (E.Z.T.); (D.B.); (M.L.)
| | - Lukáš Fojt
- Institute of Biophysics of the Czech Academy of Sciences, Královopolská 135, 612 00 Brno, Czech Republic;
| | - Bohumír Grűner
- Institute of Inorganic Chemistry of the Czech Academy of Sciences, 250 68 Řež, Czech Republic; (L.P.); (E.Z.T.); (D.B.); (M.L.)
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Anufriev SA, Timofeev SV, Anisimov AA, Suponitsky KY, Sivaev IB. Bis(dicarbollide) Complexes of Transition Metals as a Platform for Molecular Switches. Study of Complexation of 8,8'-Bis(methylsulfanyl) Derivatives of Cobalt and Iron Bis(dicarbollides). Molecules 2020; 25:molecules25235745. [PMID: 33291459 PMCID: PMC7730339 DOI: 10.3390/molecules25235745] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2020] [Revised: 12/01/2020] [Accepted: 12/04/2020] [Indexed: 11/16/2022] Open
Abstract
Complexation of the 8,8'-bis(methylsulfanyl) derivatives of cobalt and iron bis(dicarbollides) [8,8'-(MeS)2-3,3'-M(1,2-C2B9H10)2]- (M = Co, Fe) with copper, silver, palladium and rhodium leads to the formation of the corresponding chelate complexes, which is accompanied by a transition from the transoid to the cisoid conformation of the bis(dicarbollide) complex. This transition is reversible and can be used in design of coordination-driven molecular switches based on transition metal bis(dicarbollide) complexes. The solid-state structures of {(Ph3P)ClPd[8,8'- (MeS)2-3,3'-Co(1,2-C2B9H10)2-κ2-S,S']} and {(COD)Rh[8,8'-(MeS)2-3,3'-Co(1,2-C2B9H10)2-κ2-S,S']} were determined by single crystal X-ray diffraction.
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Affiliation(s)
- Sergey A. Anufriev
- A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilov Str., 119991 Moscow, Russia; (S.A.A.); (S.V.T.); (A.A.A.); (K.Y.S.)
| | - Sergey V. Timofeev
- A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilov Str., 119991 Moscow, Russia; (S.A.A.); (S.V.T.); (A.A.A.); (K.Y.S.)
| | - Alexei A. Anisimov
- A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilov Str., 119991 Moscow, Russia; (S.A.A.); (S.V.T.); (A.A.A.); (K.Y.S.)
- Higher Chemical College at the Russian Academy of Sciences, D.I. Mendeleev Russian Chemical Technological University, 9 Miusskaya Sq., 125047 Moscow, Russia
| | - Kyrill Yu. Suponitsky
- A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilov Str., 119991 Moscow, Russia; (S.A.A.); (S.V.T.); (A.A.A.); (K.Y.S.)
- Basic Department of Chemistry of Innovative Materials and Technologies, G.V. Plekhanov Russian University of Economics, 36 Stremyannyi Line, 117997 Moscow, Russia
| | - Igor B. Sivaev
- A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilov Str., 119991 Moscow, Russia; (S.A.A.); (S.V.T.); (A.A.A.); (K.Y.S.)
- Correspondence: ; Tel.: +7-916-590-2025
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Stogniy MY, Kazheva ON, Chudak DM, Shilov GV, Filippov OA, Sivaev IB, Kravchenko AV, Starodub VA, Buravov LI, Bregadze VI, Dyachenko OA. Synthesis and study ofC-substituted methylthio derivatives of cobalt bis(dicarbollide). RSC Adv 2020; 10:2887-2896. [PMID: 35496089 PMCID: PMC9048485 DOI: 10.1039/c9ra08551c] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2019] [Accepted: 12/23/2019] [Indexed: 11/21/2022] Open
Abstract
The C-methylthio derivatives of cobalt bis(dicarbollide) were synthesized by reaction of anhydrous CoCl2 with nido-carborane [7-MeS-7,8-C2B9H11]− and isolated as a mixture of rac-[1,1′-(MeS)2-3,3′-Co(1,2-C2B9H10)2]− and meso-[1,2′-(MeS)2-3,3′-Co(1,2-C2B9H10)2]− isomers. The structures of both isomers were studied using DFT quantum chemical calculations. The most preferable geometry of rotamers and the stabilization energy of C-methylthio derivatives of cobalt bis(dicarbolide) were calculated. The (BEDT-TTF)[1,1′-(MeS)2-3,3′-Co(1,2-C2B9H10)2] salt was prepared and its structure was determined by single crystal X-ray diffraction. The cisoid conformation of the rac-[1,1′-(MeS)2-3,3′-Co(1,2-C2B9H10)2]− anion is stabilized by short intramolecular CH⋯S hydrogen and BH⋯S chalcogen bonds between the dicarbollide ligands, that is in good agreement with the data of quantum chemical calculations. The C-methylthio derivatives of cobalt bis(dicarbollide) rac-[1,1′-(MeS)2-3,3′-Co(1,2-C2B9H10)2]− and meso-[1,2′-(MeS)2-3,3′-Co(1,2-C2B9H10)2]− were synthesized and studied by DFT calculations and X-ray diffraction.![]()
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Affiliation(s)
- Marina Yu. Stogniy
- A. N. Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- Moscow
- Russia
| | - Olga N. Kazheva
- Institute of Problems of Chemical Physics
- Russian Academy of Sciences
- Moscow Region
- Russia
| | | | - Gennady V. Shilov
- Institute of Problems of Chemical Physics
- Russian Academy of Sciences
- Moscow Region
- Russia
| | - Oleg A. Filippov
- A. N. Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- Moscow
- Russia
| | - Igor B. Sivaev
- A. N. Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- Moscow
- Russia
| | | | | | - Lev I. Buravov
- Institute of Problems of Chemical Physics
- Russian Academy of Sciences
- Moscow Region
- Russia
| | - Vladimir I. Bregadze
- A. N. Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- Moscow
- Russia
| | - Oleg A. Dyachenko
- Institute of Problems of Chemical Physics
- Russian Academy of Sciences
- Moscow Region
- Russia
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Anufriev SA, Suponitsky KY, Filippov OA, Sivaev IB. Synthesis and Structure of Methylsulfanyl Derivatives of Nickel Bis(Dicarbollide). Molecules 2019; 24:molecules24244449. [PMID: 31817299 PMCID: PMC6943677 DOI: 10.3390/molecules24244449] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2019] [Revised: 11/29/2019] [Accepted: 12/02/2019] [Indexed: 11/16/2022] Open
Abstract
Symmetrically and unsymmetrically substituted methylsulfanyl derivatives of nickel(III) bis(dicarbollide) (Bu4N)[8,8'-(MeS)2-3,3'-Ni(1,2-C2B9H10)2], (Bu4N)[4,4'-(MeS)2-3,3'-Ni(1,2-C2B9H10)2], and (Bu4N)[4,7'-(MeS)2-3,3'-Ni(1,2-C2B9H10)2] were synthesized, starting from [Ni(acac)2]3 and the corresponding methylsulfanyl derivatives of nido-carborane (Bu4N)[10-MeS-7,8-C2B9H11] and (Bu4N)[10-MeS-7,8-C2B9H11]. Structures of the synthesized metallacarboranes were studied by single-crystal X-ray diffraction and quantum chemical calculations. The symmetrically substituted 8,8'-isomer adopts transoid conformation stabilized by two pairs of intramolecular C-H···S hydrogen bonds between the dicarbollide ligands. The unsymmetrically substituted 4,7'-isomer adopts gauche conformation, which is stabilized by two nonequivalent C-H···S hydrogen bonds and one short chalcogen B-H···S bond (2.53 Å, -1.4 kcal/mol). The gauche conformation was found to be also preferred for the 4,7'-isomer.
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Affiliation(s)
- Sergey A. Anufriev
- A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilov Str., Moscow 119991, Russia; (S.A.A.); (K.Y.S.); (O.A.F.)
| | - Kyrill Yu. Suponitsky
- A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilov Str., Moscow 119991, Russia; (S.A.A.); (K.Y.S.); (O.A.F.)
| | - Oleg A. Filippov
- A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilov Str., Moscow 119991, Russia; (S.A.A.); (K.Y.S.); (O.A.F.)
- Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 16/10 Miklukho-Maklay Str., Moscow 117997, Russia
| | - Igor B. Sivaev
- A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilov Str., Moscow 119991, Russia; (S.A.A.); (K.Y.S.); (O.A.F.)
- Basic Department of Chemistry of Innovative Materials and Technologies, G.V. Plekhanov Russian University of Economics, 36 Stremyannyi Line, Moscow 117997, Russia
- Correspondence: ; Tel.: +7-916-590-2025
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Anufriev SA, Erokhina SA, Suponitsky KY, Anisimov AA, Laskova JN, Godovikov IA, Fabrizi de Biani F, Corsini M, Sivaev IB, Bregadze VI. Synthesis and structure of bis(methylsulfanyl) derivatives of iron bis(dicarbollide). J Organomet Chem 2018. [DOI: 10.1016/j.jorganchem.2018.04.019] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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