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Denis F, Alexander C, Sergey S, Tatyana N, Alexander Z. Biochip for genotyping SNPs defining core Y-chromosome haplogroups in Russian population groups. BIOCHIP JOURNAL 2014. [DOI: 10.1007/s13206-014-8303-z] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
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Kharkov VN, Khamina KV, Medvedeva OF, Simonova KV, Eremina ER, Stepanov VA. Gene pool of Buryats: Clinal variability and territorial subdivision based on data of Y-chromosome markers. RUSS J GENET+ 2014. [DOI: 10.1134/s1022795413110082] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Kharkov VN, Khamina KV, Medvedeva OF, Simonova KV, Khitrinskaya IY, Stepanov VA. Gene-pool structure of Tuvinians inferred from Y-chromosome marker data. RUSS J GENET+ 2013. [DOI: 10.1134/s102279541312003x] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Paleo-Balkan and Slavic contributions to the genetic pool of Moldavians: insights from the Y chromosome. PLoS One 2013; 8:e53731. [PMID: 23341985 PMCID: PMC3547065 DOI: 10.1371/journal.pone.0053731] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2012] [Accepted: 12/04/2012] [Indexed: 11/25/2022] Open
Abstract
Moldova has a rich historical and cultural heritage, which may be reflected in the current genetic makeup of its population. To date, no comprehensive studies exist about the population genetic structure of modern Moldavians. To bridge this gap with respect to paternal lineages, we analyzed 37 binary and 17 multiallelic (STRs) polymorphisms on the non-recombining portion of the Y chromosome in 125 Moldavian males. In addition, 53 Ukrainians from eastern Moldova and 54 Romanians from the neighboring eastern Romania were typed using the same set of markers. In Moldavians, 19 Y chromosome haplogroups were identified, the most common being I-M423 (20.8%), R-M17* (17.6%), R-M458 (12.8%), E-v13 (8.8%), R-M269* and R-M412* (both 7.2%). In Romanians, 14 haplogroups were found including I-M423 (40.7%), R-M17* (16.7%), R-M405 (7.4%), E-v13 and R-M412* (both 5.6%). In Ukrainians, 13 haplogroups were identified including R-M17 (34.0%), I-M423 (20.8%), R-M269* (9.4%), N-M178, R-M458 and R-M73 (each 5.7%). Our results show that a significant majority of the Moldavian paternal gene pool belongs to eastern/central European and Balkan/eastern Mediterranean Y lineages. Phylogenetic and AMOVA analyses based on Y-STR loci also revealed that Moldavians are close to both eastern/central European and Balkan-Carpathian populations. The data correlate well with historical accounts and geographical location of the region and thus allow to hypothesize that extant Moldavian paternal genetic lineages arose from extensive recent admixture between genetically autochthonous populations of the Balkan-Carpathian zone and neighboring Slavic groups.
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Khar’kov VN, Khamina KV, Medvedeva OF, Shtygasheva OV, Stepanov VA. Genetic diversity of the Khakass gene pool: Subethnic differentiation and the structure of Y-chromosome haplogroups. Mol Biol 2011. [DOI: 10.1134/s0026893311020117] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Malyarchuk BA, Derenko MV. Gene pool structure of Russian populations from the European part of Russia inferred from the data on Y chromosome haplogroups distribution. RUSS J GENET+ 2011. [DOI: 10.1134/s1022795408020105] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Woźniak M, Malyarchuk B, Derenko M, Vanecek T, Lazur J, Gomolcak P, Grzybowski T. Similarities and distinctions in Y chromosome gene pool of Western Slavs. AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY 2010; 142:540-8. [PMID: 20091807 DOI: 10.1002/ajpa.21253] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Analysis of Y chromosome Y-STRs has proven to be a useful tool in the field of population genetics, especially in the case of closely related populations. We collected DNA samples from 169 males of Czech origin, 80 males of Slovakian origin, and 142 males dwelling Northern Poland. We performed Y-STR analysis of 12 loci in the samples collected (PowerPlex Y system from Promega) and compared the Y chromosome haplotype frequencies between the populations investigated. Also, we used Y-STR data available from the literature for comparison purposes. We observed significant differences between Y chromosome pools of Czechs and Slovaks compared to other Slavic and European populations. At the same time we were able to point to a specific group of Y-STR haplotypes belonging to an R1a haplogroup that seems to be shared by Slavic populations dwelling in Central Europe. The observed Y chromosome diversity may be explained by taking into consideration archeological and historical data regarding early Slav migrations.
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Affiliation(s)
- Marcin Woźniak
- Institute of Molecular and Forensic Genetics, Collegium Medicum of the Nicolaus Copernicus University, 85-094 Bydgoszcz, Poland.
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PETREJCÍKOVÁ EVA, SOTÁK MIROSLAV, BERNASOVSKÁ JARMILA, BERNASOVSKÝ IVAN, SOVICOVÁ ADRIANA, BÔZIKOVÁ ALEXANDRA, BORONOVÁ IVETA, GABRIKOVÁ DANA, ŠVÍCKOVÁ PETRA, MACEKOVÁ SONA, CVERHOVÁ VALÉRIA. The genetic structure of the Slovak population revealed by Y-chromosome polymorphisms. ANTHROPOL SCI 2010. [DOI: 10.1537/ase.090203] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/01/2022]
Affiliation(s)
- EVA PETREJCÍKOVÁ
- Department of Biology, Faculty of Humanities and Natural Science, University of Prešov, Prešov
| | - MIROSLAV SOTÁK
- Department of Biology, Faculty of Humanities and Natural Science, University of Prešov, Prešov
| | - JARMILA BERNASOVSKÁ
- Department of Biology, Faculty of Humanities and Natural Science, University of Prešov, Prešov
| | - IVAN BERNASOVSKÝ
- Department of Biology, Faculty of Humanities and Natural Science, University of Prešov, Prešov
| | - ADRIANA SOVICOVÁ
- Department of Biology, Faculty of Humanities and Natural Science, University of Prešov, Prešov
| | - ALEXANDRA BÔZIKOVÁ
- Department of Biology, Faculty of Humanities and Natural Science, University of Prešov, Prešov
| | - IVETA BORONOVÁ
- Department of Biology, Faculty of Humanities and Natural Science, University of Prešov, Prešov
| | - DANA GABRIKOVÁ
- Department of Biology, Faculty of Humanities and Natural Science, University of Prešov, Prešov
| | - PETRA ŠVÍCKOVÁ
- Department of Biology, Faculty of Humanities and Natural Science, University of Prešov, Prešov
| | - SONA MACEKOVÁ
- Department of Biology, Faculty of Humanities and Natural Science, University of Prešov, Prešov
| | - VALÉRIA CVERHOVÁ
- Department of Biology, Faculty of Humanities and Natural Science, University of Prešov, Prešov
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Kharkov VN, Medvedeva OF, Luzina FA, Kolbasko AV, Gafarov NI, Puzyrev VP, Stepanov VA. Comparative characteristics of the gene pool of Teleuts inferred from Y-chromosomal marker data. RUSS J GENET+ 2009. [DOI: 10.1134/s1022795409080158] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Varzari A, Kharkov V, Stephan W, Dergachev V, Puzyrev V, Weiss EH, Stepanov V. Searching for the origin of Gagauzes: inferences from Y-chromosome analysis. Am J Hum Biol 2009; 21:326-36. [PMID: 19107901 DOI: 10.1002/ajhb.20863] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
The Gagauzes are a small Turkish-speaking ethnic group living mostly in southern Moldova and northeastern Bulgaria. The origin of the Gagauzes is obscure. They may be descendants of the Turkic nomadic tribes from the Eurasian steppes, as suggested by the "Steppe" hypothesis, or have a complex Anatolian-steppe origin, as postulated by the "Seljuk" or "Anatolian" hypothesis. To distinguish these hypotheses, a sample of 89 Y-chromosomes representing two Gagauz populations from the Republic of Moldova was analyzed for 28 binary and seven STR polymorphisms. In the gene pool of the Gagauzes a total of 15 Y-haplogroups were identified, the most common being I-P37 (20.2%), R-M17 (19.1%), G-M201 (13.5%), R-M269 (12.4%), and E-M78 (11.1%). The present Gagauz populations were compared with other Balkan, Anatolian, and Central Asian populations by means of genetic distances, nonmetric multidimentional scaling and analyses of molecular variance. The analyses showed that Gagauzes belong to the Balkan populations, suggesting that the Gagauz language represents a case of language replacement in southeastern Europe. Interestingly, the detailed study of microsatellite haplotypes revealed some sharing between the Gagauz and Turkish lineages, providing some support of the hypothesis of the "Seljuk origin" of the Gagauzes. The faster evolving microsatellite loci showed that the two Gagauz samples investigated do not represent a homogeneous group. This finding matches the cultural and linguistic heterogeneity of the Gagauzes well, suggesting a crucial role of social factors in shaping the Gagauz Y-chromosome pool and possibly also of effects of genetic drift.
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Fechner A, Quinque D, Rychkov S, Morozowa I, Naumova O, Schneider Y, Willuweit S, Zhukova O, Roewer L, Stoneking M, Nasidze I. Boundaries and clines in the West Eurasian Y-chromosome landscape: insights from the European part of Russia. AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY 2008; 137:41-7. [PMID: 18470899 DOI: 10.1002/ajpa.20838] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Previous studies of Y chromosome variation have revealed that western Europe, the Volga-Ural region, and the Caucasus differ dramatically with respect to Y-SNP haplogroup composition. The European part of Russia is situated in between these three regions; to determine if these differences reflect clines or boundaries in the Y-chromosome landscape, we analyzed 12 Y-SNPs in 545 males from 12 populations from the European part of Russia. The majority of Russian Y chromosomes (from 74% to 94%) belong to three Y chromosomal lineages [I-M170, R1a1-M17, and N3-TAT] that are also frequent in the rest of east Europe, north Europe, and/or in the Volga-Ural region. We find significant but low correlations between haplogroup frequencies and the geographic location of populations, suggesting gradual change in the Y chromosome gene pool across western Eurasia. However, we also find some significant boundaries between populations, suggesting that both isolation and migration have influenced the Y chromosome landscape.
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Affiliation(s)
- Angela Fechner
- Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, D-04103 Leipzig, Germany
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Derenko M, Malyarchuk B, Denisova G, Wozniak M, Grzybowski T, Dambueva I, Zakharov I. Y-chromosome haplogroup N dispersals from south Siberia to Europe. J Hum Genet 2007; 52:763-770. [PMID: 17703276 DOI: 10.1007/s10038-007-0179-5] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2007] [Accepted: 07/13/2007] [Indexed: 11/27/2022]
Abstract
In order to reconstruct the history of Y-chromosome haplogroup (hg) N dispersals in north Eurasia, we have analyzed the diversity of microsatellite (STR) loci within two major hg N clades, N2 and N3, in a total sample of 1,438 males from 17 ethnic groups, mainly of Siberian and Eastern European origin. Based on STR variance analysis we observed that hg N3a is more diverse in Eastern Europe than in south Siberia. However, analysis of median networks showed that there are two STR subclusters of hg N3a, N3a1 and N3a2, that are characterized by different genetic histories. Age calculation of STR variation within subcluster N3a1 indicated that its first expansion occurred in south Siberia [approximately 10,000 years (ky)] and then this subcluster spread into Eastern Europe where its age is around 8 ky ago. Meanwhile, younger subcluster N3a2 originated in south Siberia (probably in the Baikal region) approximately 4 ky ago. Median network and variance analyses of STR haplotypes suggest that south Siberian N3a2 haplotypes spread further into Volga-Ural region undergoing serial bottlenecks. In addition, median network analysis of STR data demonstrates that haplogroup N2-A is represented by two subclusters, showing recent expansion times. The data obtained allow us to suggest Siberian origin of haplogroups N3 and N2 that are currently widespread in some populations of Eastern Europe.
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Affiliation(s)
- Miroslava Derenko
- Genetics Laboratory, Institute of Biological Problems of the North, Russian Academy of Sciences, Portovaya str. 18, 685000, Magadan, Russia.
| | - Boris Malyarchuk
- Genetics Laboratory, Institute of Biological Problems of the North, Russian Academy of Sciences, Portovaya str. 18, 685000, Magadan, Russia
| | - Galina Denisova
- Genetics Laboratory, Institute of Biological Problems of the North, Russian Academy of Sciences, Portovaya str. 18, 685000, Magadan, Russia
| | - Marcin Wozniak
- Forensic Medicine Institute, the Ludwik Rydygier Medical College, The Nicolaus Copernicus University in Torun, 85-094, Bydgoszcz, Poland
| | - Tomasz Grzybowski
- Forensic Medicine Institute, the Ludwik Rydygier Medical College, The Nicolaus Copernicus University in Torun, 85-094, Bydgoszcz, Poland
| | - Irina Dambueva
- Institute of General and Experimental Biology, Russian Academy of Sciences, 670047, Ulan-Ude, Russia
| | - Ilia Zakharov
- Vavilov Institute of General Genetics, Russian Academy of Sciences, Gubkin Str. 3, 119991, Moscow, Russia
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Kharkov VN, Stepanov VA, Medvedeva OF, Spiridonova MG, Voevoda MI, Tadinova VN, Puzyrev VP. Gene pool differences between Northern and Southern Altaians inferred from the data on Y-chromosomal haplogroups. RUSS J GENET+ 2007. [DOI: 10.1134/s1022795407050110] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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