Necrotrophic fungus Macrophomina phaseolina tolerates chromium stress through regulating antioxidant enzymes and genes expression (MSN1 and MT)

Transcriptome analysis reveals diverse Curvularia tsudae strategies in response to cadmium stress

Cadmium (Cd) is a highly toxic heavy metal that poses significant threats to living organisms. Curvularia tsudae has demonstrated remarkable survival capabilities in the presence of high Cd concentrations, exhibiting its exceptional Cd tolerance. Although some physiological studies have been conducted, the molecular mechanisms underlying Cd tolerance in C. tsudae is largely unknown. In this study, a comparative transcriptome analysis was performed to explore the molecular mechanisms of C. tsudae under Cd stress. Among the 10,498 identified unigenes, 2526 differentially expressed genes (DEGs) were identified between the Cd-free and Cd-treated samples. Functional annotation and enrichment analysis of these DEGs identified several key biological processes involved in coping with Cd stress. Genes related to cell wall modification and organic acid metabolism contributes to Cd binding or chelation. Fourier transform infrared spectroscopy (FTIR) analysis further highlighted the modifications in functional groups with the cell wall under Cd stress. Furthermore, the transporters tended to be modulated in response to Cd stress, and up-regulated genes involved in antioxidants likely contributes to high Cd tolerance. The processes from DNA to protein metabolism appeared to responsive to the presence of Cd stress as well. These results contribute to the advance of the current knowledge about the response of C. tsudae to Cd stress and lay the foundation for further advancements in using fungi for the remediation of Cd-polluted environments.

Ameliorative effects of Si-SNP synergy to mitigate chromium induced stress in Brassica juncea

Hyperaccumulation of heavy metal in agricultural land has hampered yield of important crops globally. It has consequently deepened concerns regarding the burning issue of food security in the world. Among heavy metals, Chromium (Cr) is not needed for plant growth and found to pose detrimental effects on plants. Present study highlights the role of exogenous application of sodium nitroprusside (SNP, exogenous donor of NO) and silicon (Si) in alleviating detrimental ramification of Cr toxicity in Brassica juncea. The exposure of B. juncea to Cr (100 μM) under hydroponic system hampered the morphological parameters of plant growth like length and biomass and physiological parameters like carotenoid and chlorophyll contents. It also resulted in oxidative stress by disrupting the equilibrium between ROS production and antioxidant quenching leading to accumulation of ROS such as hydrogen peroxide (H2O2) and superoxide (O2•‾) radicle which causes lipid peroxidation. However, application of Si and SNP both individually and in combination counteracted oxidative stress due to Cr by regulating ROS accumulation and enhancing antioxidant metabolism by upregulation of antioxidant genes of DHAR, MDHAR, APX and GR. As the alleviatory effects were more pronounced in plants treated with combined application of Si and SNP; therefore, our findings suggest that dual application of these two alleviators can be used to mitigate Cr stress.

Farmyard manure, a potential organic additive to reclaim copper and Macrophomina phaseolina stress responses in mash bean plants

In the era of global warming, stress combinations instead of individual stress are realistic threats faced by plants that can alter or trigger a wide range of plant responses. In the current study, the cumulative effect of charcoal rot disease caused by notorious fungal pathogen viz., Macrophomina phaseolina was investigated under toxic levels of copper (Cu) in mash bean, and farmyard manure (FYM) was employed to manage stress. Therefore, Cu-spiked soil (50 and 100 mg/kg) was inoculated with the pathogen, and amended with 2% FYM, to assess the effect of intricate interactions on mash bean plants through pot experiments. Results demonstrated that the individual stress of the pathogen or Cu was more severe for morpho-growth, physio-biochemical, and expression profiles of stress-related genes and total protein in mash bean plants as compared to stress combinations. Under single Cu stress, a significant amount of Cu accumulated in plant tissues, particularly in roots than in upper ground tissues, while, under stress combination less Cu accumulated in the plants. Nonetheless, 2% FYM in soil encountered the negative effect of stress responses provoked by the pathogen, Cu, or both by improving health markers (photosynthetic pigments, reducing sugar, total phenolics) and oxidative stress markers (catalase, peroxidase, and polyphenol oxidase), together with regulating the expression of stress-related genes (catalase, ascorbate peroxidase, and cytokinin-resistant genes), and proteins, besides decreasing Cu uptake in the plants. FYM worked better at lower concentrations (50 mg/kg) of Cu than at higher ones (100 mg/kg), hence could be used as a suitable option for better growth, yield, and crop performance under charcoal rot disease stress in Cu-contaminated soils.

Cloncurry buffel grass mitigated Cr(III) and Cr(VI) toxicity in tomato plant

Contamination of agricultural soil with chromium (Cr) ions has threatened global crop, human and ecosystem health. Its two oxidation states viz. Cr(III) and Cr(VI) are most stable and readily available to the plants. The study explored the impact of increasing exposure (up to 500 ppm) of Cr(III) and Cr(VI) on bio-physical traits of 15-day-old seedlings (in vitro) as well as 60-day-old tomato plant (in vivo), and highlighted the importance of buffel grass (Cenchrus pennisetiformis) in mitigating Cr levels in the tomato plants. In vitro, Petri plate bioassays with 13 different concentrations (20-500 ppm) of Cr(III) and Cr(VI) depicted the highly toxic effect of metal ions ≥ 200 ppm on all bio-physical traits of tomato seedlings. In vivo, soil spiked with Cr(III) and Cr(VI) (200, 300, and 400 mg/kg) was amended with 1% and 2% dry biomass of buffel grass. Phytotoxicity was higher in Cr(VI)-spiked soil compared with Cr(III)-spiked soil. Cr was mainly accumulated in tomato roots, and more Cr was translocated from roots to shoots from Cr(VI)-spiked soil than Cr(III)-spiked soil. Soil amendments with 2% weed biomass reduced metal toxicity in plants, particularly at 200 and 300 mg/kg of Cr. Protein profiles through SDS-PAGE revealed 12-50 kDa (mainly PR proteins) as an important region in tomato leaf, where many new bands were expressed under different treatments, particularly in the treatments provided with buffel grass. PCA-based biplot clearly separated Cr tolerance treatments from highly sensitive treatments. For the cultivation of tomato plants in Cr(III) and Cr(VI) contaminated soil (200 and 300 mg/kg), the biomass of Cloncurry buffel grass should be considered an effective and easily available phyto-management option.

Identification of differentially expressed genes for Pseudomonas sp. Cr13 stimulated by hexavalent chromium

Over exploitation of mineral resources has increasingly caused serious heavy metal contamination such as chromium (Cr). Cr(VI), the pathogenicity factor, is one of common environmental contaminants and widely known health hazards to living organisms. Therefore, it is urgent to control the polluted soil. Up to now, little is known about the regulatory mechanisms of Cr response in Pseudomonas sp. Cr13. In this study, transcriptome and differentially expressed genes in Pseudomonas sp. Cr13 strain was characterized by a comparison between Cr(VI)-treated sample and control sample using transcriptome sequencing approach. In total, 2974 genes were annotated, including 1245 (1154 down-regulated genes and 91 up-regulated genes) differentially expressed genes (DEGs). All DEGs could be assigned to 29 pathways, of which pathways related to amino acid metabolism, carbohydrate metabolism, energy metabolism and signal transduction mechanism were significantly enriched in Pseudomonas sp. Cr13. A possible mechanism for Cr toxicity response might be an active efflux which utilized a heavy metal translocating P-type ATPase to lower the intracellular Cr concentration. The down-regulated genes related to the antioxidant defense system had a key role in Cr reduction, such as SodA, Gst, osmC, BtuE, KatE, csdA and AhpC. The proteins that were visibly up-regulated, were likely to involve in alleviating Cr(VI) stress, and the significantly down-regulated genes such as MarR, Lrp, FhlA, GntR, HrcA, LysR family genes, were likely to reduce Cr(VI) induced oxidative stress. In addition, real-time quantitative PCR was used to analyze the expression patterns of some Cr responsive genes. This study reported the first identification of Cr responsive genes, and inferred the underlying regulatory mechanisms of response to Cr(VI) stress in Pseudomonas sp. Cr13.

Method and mechanism of chromium removal from soil: a systematic review

Heavy metal pollution has increasingly affected human life, and the treatment of heavy metal pollution, especially chromium pollution, is still a major problem in the field of environmental governance. As a commonly used industrial metal, chromium can easily enter the environment with improperly treated industrial waste or wastewater, then pollute soil and water sources, and eventually accumulate in the human body through the food chain. Many countries and regions in the world are threatened by soil chromium pollution, resulting in the occurrence of cancer and a variety of metabolic diseases. However, as a serious threat to agriculture, food, and human health. Notwithstanding, there are limited latest and systematic review on the removal methods, mechanisms, and effects of soil chromium pollution in recent years. Hence, this article outlines some of the methods and mechanisms for the removal of chromium in soil, including physical, chemical, biological, and biochar methods, which provide a reference for the treatment and research on soil chromium pollution drawn from existing publications.

Biotransformation of Chromium (VI) via a Reductant Activity from the Fungal Strain Purpureocillium lilacinum

Industrial effluents from chromium-based products lead to chromium pollution in the environment. Several technologies have been employed for the removal of chromium (Cr) from the environment, including adsorption, ion-exchange, bioremediation, etc. In this study, we isolated a Cr (VI)-resistant fungus, Purpureocillium lilacinum, from contaminated soil, which could reduce chromium. We also characterized a reductant activity of dichromate found in the cellular fraction of the fungus: optimal pH and temperature, effect of enzymatic inhibitors and enhancers, metal ions, use of electron donors, and initial Cr (VI) and protein concentration. This study also shows possible mechanisms that could be involved in the elimination of this metal. We observed an increase in the reduction of Cr (VI) activity in the presence of NADH followed by that of formate and acetate, as electron donor. This reduction was highly inhibited by EDTA followed by NaN₃ and KCN, and this activity showed the highest activity at an optimal pH of 7.0 at 37 °C with a protein concentration of 3.62 µg/mL.

Antifungal potential of zinc against leaf spot disease in chili pepper caused by Alternaria alternata

The fungal pathogen, Alternaria alternata is responsible for causing leaf spot disease in many plants, including chili pepper. Zinc (Zn) an essential micronutrient for plant growth, also increases resistance in plants against diseases, and also acts as an antifungal agent. Here, in vitro effects of ZnSO4 on the propagation of A. alternata were investigated, and also in vivo, the effect of foliar application of ZnSO4 was investigated in chili pepper plants under disease stress. In vitro, ZnSO4 inhibited fungal growth in a dose-dependent manner, with complete inhibition being observed at the concentration of 8.50 mM. Hyphae and conidial damage were observed along with abnormal activity of antioxidant enzymes, Fourier-transform infrared spectroscopy confirmed the major changes in the protein structure of the fungal biomass after Zn accumulation. In vivo, pathogen infection caused the highest leaf spot disease incidence, and cumulative disease index, which resulted in a significant reduction in the plant's growth (length and biomass), and physiochemical traits (photosynthetic pigment, activity of catalase, peroxidase, polyphenol oxidase, and phenylalanine ammonia lyase). The heat map and principal component analysis based on disease, growth and, physico-chemical variables generated useful information regarding the best treatment useful for disease management. Foliar Zn (0.036 mM) acted as a resistance inducer in chili pepper plants that improved activities of antioxidants (CAT and POX), and defense compounds (PPO and PAL), while managing 77% of disease. The study indicated foliar ZnSO4 as an effective and sustainable agriculture practice to manage Alternaria leaf spot disease in chili pepper plants.

Tolerance of three fungal species to lithium and cobalt: Implications for bioleaching of spent rechargeable Li-ion batteries

AIMS

This paper aims to quantify the growth and organic acid production of Aspergillus niger, Penicillium chrysogenum and Penicillium simplicissimum when these fungi are exposed to varying levels of lithium (Li) and cobalt (Co). The study also tests whether pre-exposing the fungi to these metals enables the fungi to develop tolerance to Li or Co.

METHODS AND RESULTS

When cultures of A. niger, P. chrysogenum or P. simplicissimum were exposed to 250 mg l^-1 of Li or Co, biomass production and excretion of organic acids were significantly inhibited after 5 days of growth compared to cultures grown in the absence of these metals. Pre-exposing cultures of A. niger to 250 mg l^-1 of Li or Co for 20 days significantly increased biomass production when the fungus was subsequently sub-cultured into 250 or 500 mg l^-1 of Li or Co. However, pre-exposure of P. chrysogenum or P. simplicissimum to 250 mg l^-1 of Li or Co for 20 days did not increase biomass production.

CONCLUSIONS

Aspergillus niger, but not the Penicillium species, developed tolerance to Li and to Co during the 20-day pre-exposure period. Therefore, processes that utilize fungal bioleaching with A. niger to mobilize and recover valuable metals such as Li or Co should consider a pre-exposure step for fungi to improve their tolerance to metal toxicity.

SIGNIFICANCE AND IMPACT OF THE STUDY

Fungi may have the ability to extract valuable metals such as Li and Co from spent rechargeable batteries. However, the toxicity of the extracted metals can inhibit fungal growth and organic acid production. Pre-exposure to metals may alleviate toxicity for some fungal species. This knowledge can be used to improve the design of bioleaching protocols, increasing the potential for fungal bioleaching to become an economical and environmentally friendly method of recovering Li and Co from spent batteries.

An approach to the photocatalytic mechanism in the TiO2-nanomaterials microorganism interface for the control of infectious processes

The approach of this timely review considers the current literature that is focused on the interface nanostructure/cell-wall microorganism to understand the annihilation mechanism. Morphological studies use optical and electronic microscopes to determine the physical damage on the cell-wall and the possible cell lysis that confirms the viability and microorganism death. The key parameters of the tailoring the surface of the photoactive nanostructures such as the metal functionalization with bacteriostatic properties, hydrophilicity, textural porosity, morphology and the formation of heterojunction systems, can achieve the effective eradication of the microorganisms under natural conditions, ranging from practical to applications in environment, agriculture, and so on. However, to our knowledge, a comprehensive review of the microorganism/nanomaterial interface approach has rarely been conducted. The final remarks point the ideal photocatalytic way for the effective prevention/eradication of microorganisms, considering the resistance that the microorganism could develop without the appropriate regulatory aspects for human and ecosystem safety.