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Cai P, Lan Y, Gong F, Li C, Xia F, Li Y, Fang C. Comparative physiology and transcriptome response patterns in cold-tolerant and cold-sensitive varieties of Solanum melongena. BMC PLANT BIOLOGY 2024; 24:256. [PMID: 38594627 PMCID: PMC11003173 DOI: 10.1186/s12870-024-04922-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2023] [Accepted: 03/18/2024] [Indexed: 04/11/2024]
Abstract
BACKGROUND Climate change has led to severe cold events, adversely impacting global crop production. Eggplant (Solanum melongena L.), a significant economic crop, is highly susceptible to cold damage, affecting both yield and quality. Unraveling the molecular mechanisms governing cold resistance, including the identification of key genes and comprehensive transcriptional regulatory pathways, is crucial for developing new varieties with enhanced tolerance. RESULTS In this study, we conducted a comparative analysis of leaf physiological indices and transcriptome sequencing results. The orthogonal partial least squares discriminant analysis (OPLS-DA) highlighted peroxidase (POD) activity and soluble protein as crucial physiological indicators for both varieties. RNA-seq data analysis revealed that a total of 7024 and 6209 differentially expressed genes (DEGs) were identified from variety "A" and variety "B", respectively. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment of DEGs demonstrated that the significant roles of starch and sucrose metabolism, glutathione metabolism, terpenoid synthesis, and energy metabolism (sucrose and starch metabolism) were the key pathways in eggplant. Weighted gene co-expression network analysis (WGCNA) shown that the enrichment of numerous cold-responsive genes, pathways, and soluble proteins in the MEgrep60 modules. Core hub genes identified in the co-expression network included POD, membrane transporter-related gene MDR1, abscisic acid-related genes, growth factor enrichment gene DELLA, core components of the biological clock PRR7, and five transcription factors. Among these, the core transcription factor MYB demonstrated co-expression with signal transduction, plant hormone, biosynthesis, and metabolism-related genes, suggesting a pivotal role in the cold response network. CONCLUSION This study integrates physiological indicators and transcriptomics to unveil the molecular mechanisms responsible for the differences in cold tolerance between the eggplant cold-tolerant variety "A" and the cold-sensitive variety "B". These mechanisms include modulation of reactive oxygen species (ROS), elevation in osmotic carbohydrate and free proline content, and the expression of terpenoid synthesis genes. This comprehensive understanding contributes valuable insights into the molecular underpinnings of cold stress tolerance, ultimately aiding in the improvement of crop cold tolerance.
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Affiliation(s)
- Peng Cai
- Horticulture Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China
- Vegetable Germplasm Innovation and Variety Improvement Key Laboratory of Sichuan Province, Chengdu, 610066, China
- Sichuan Province Engineering Technology Research Center of Vegetables, Chengdu, 611934, China
| | - Yanhong Lan
- Horticulture Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China
- Vegetable Germplasm Innovation and Variety Improvement Key Laboratory of Sichuan Province, Chengdu, 610066, China
- Sichuan Province Engineering Technology Research Center of Vegetables, Chengdu, 611934, China
| | - Fangyi Gong
- Horticulture Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China
- Vegetable Germplasm Innovation and Variety Improvement Key Laboratory of Sichuan Province, Chengdu, 610066, China
- Sichuan Province Engineering Technology Research Center of Vegetables, Chengdu, 611934, China
| | - Chun Li
- Horticulture Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China
- Vegetable Germplasm Innovation and Variety Improvement Key Laboratory of Sichuan Province, Chengdu, 610066, China
- Sichuan Province Engineering Technology Research Center of Vegetables, Chengdu, 611934, China
| | - Feng Xia
- Horticulture Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China
- Vegetable Germplasm Innovation and Variety Improvement Key Laboratory of Sichuan Province, Chengdu, 610066, China
- Sichuan Province Engineering Technology Research Center of Vegetables, Chengdu, 611934, China
| | - Yifan Li
- Horticulture Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China
- Vegetable Germplasm Innovation and Variety Improvement Key Laboratory of Sichuan Province, Chengdu, 610066, China
- Sichuan Province Engineering Technology Research Center of Vegetables, Chengdu, 611934, China
| | - Chao Fang
- Horticulture Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China.
- Vegetable Germplasm Innovation and Variety Improvement Key Laboratory of Sichuan Province, Chengdu, 610066, China.
- Sichuan Province Engineering Technology Research Center of Vegetables, Chengdu, 611934, China.
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Li N, Yang L, Chen K, Kang Y, Cao Y, Du H, Mou H, Sun H, Ao T, Chen W. Selenium improves the medicinal safety and quality of Bletilla striata by promoting the fixation of cadmium in root: Pot and field experiments. JOURNAL OF HAZARDOUS MATERIALS 2023; 459:132275. [PMID: 37579717 DOI: 10.1016/j.jhazmat.2023.132275] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2023] [Revised: 08/02/2023] [Accepted: 08/10/2023] [Indexed: 08/16/2023]
Abstract
Soil cadmium (Cd) pollution poses a considerable threat to the safe production of traditional Chinese medicine (TCM) in China. The tubers of Bletilla striata, a precious TCM, are widely used to treat various ailments. However, the medicinal safety and quality of tubers are significantly affected by high Cd accumulation. While selenium (Se) is known to reduce Cd concentration in traditional crops, its impact on Cd content in medicinal parts and overall quality remains underexplored. To bridge the gap, a pot experiment and field validation were conducted to determine the effectiveness of foliar Se application. The results revealed that Se effectively counteracted Cd damage. Compared to Cd treatment alone, Se at 1.5 mg L-1 significantly decreased Cd content by 46.33 %, increased the biomass by 21.48 %, and raised the total phenolic, flavonoid, saponin, and polysaccharide contents by 46.31 %, 30.46 %, 27.08 %, and 29.01 %, respectively, in tubers. Furthermore, this study explored the mechanism of Se action. Se facilitated Cd accumulation in root cell walls and soluble fractions, enhanced the synthesis of phytochelatins (PC), and stored them in the form of PC-Cd complexes. These findings have profound implications for the cultivation of TCM, ensuring its safety, and promoting sustainable agricultural practices.
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Affiliation(s)
- Na Li
- College of Architecture and Environment, Sichuan University, Chengdu 610065, China
| | - Li Yang
- College of Architecture and Environment, Sichuan University, Chengdu 610065, China; Key Laboratory of the Evaluation and Monitoring of Southwest Land Resources (Ministry of Education), Sichuan Normal University, Chengdu 610068, China
| | - Kuiwei Chen
- College of Architecture and Environment, Sichuan University, Chengdu 610065, China
| | - Yuchen Kang
- College of Architecture and Environment, Sichuan University, Chengdu 610065, China
| | - Yuan Cao
- College of Architecture and Environment, Sichuan University, Chengdu 610065, China
| | - Hengwei Du
- College of Architecture and Environment, Sichuan University, Chengdu 610065, China; Institute for Disaster Management and Reconstruction, Sichuan University-The Hong Kong Polytechnic University, Chengdu 610065, China; State Key Laboratory of Hydraulics and Mountain River Engineering, Sichuan University, Chengdu 610065, China; Key Laboratory of the Evaluation and Monitoring of Southwest Land Resources (Ministry of Education), Sichuan Normal University, Chengdu 610068, China
| | - Haiyan Mou
- College of Architecture and Environment, Sichuan University, Chengdu 610065, China; Institute for Disaster Management and Reconstruction, Sichuan University-The Hong Kong Polytechnic University, Chengdu 610065, China.
| | - Hui Sun
- College of Architecture and Environment, Sichuan University, Chengdu 610065, China
| | - Tianqi Ao
- State Key Laboratory of Hydraulics and Mountain River Engineering, Sichuan University, Chengdu 610065, China
| | - Wenqing Chen
- College of Architecture and Environment, Sichuan University, Chengdu 610065, China; State Key Laboratory of Hydraulics and Mountain River Engineering, Sichuan University, Chengdu 610065, China.
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Yang GL, Huang L, Yang X, Li Z, Liao HM, Mao K, Liu ZJ, Geng HY, Cao Q, Tan AJ. Transcriptomic and Functional Analyses of Two Cadmium Hyper-Enriched Duckweed Strains Reveal Putative Cadmium Tolerance Mechanisms. Int J Mol Sci 2023; 24:12157. [PMID: 37569533 PMCID: PMC10418380 DOI: 10.3390/ijms241512157] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2023] [Revised: 07/26/2023] [Accepted: 07/27/2023] [Indexed: 08/13/2023] Open
Abstract
Cadmium (Cd) is one of the most toxic metals in the environment and exerts deleterious effects on plant growth and production. Duckweed has been reported as a promising candidate for Cd phytoremediation. In this study, the growth, Cd enrichment, and antioxidant enzyme activity of duckweed were investigated. We found that both high-Cd-tolerance duckweed (HCD) and low-Cd-tolerance duckweed (LCD) strains exposed to Cd were hyper-enriched with Cd. To further explore the underlying molecular mechanisms, a genome-wide transcriptome analysis was performed. The results showed that the growth rate, chlorophyll content, and antioxidant enzyme activities of duckweed were significantly affected by Cd stress and differed between the two strains. In the genome-wide transcriptome analysis, the RNA-seq library generated 544,347,670 clean reads, and 1608 and 2045 differentially expressed genes were identified between HCD and LCD, respectively. The antioxidant system was significantly expressed during ribosomal biosynthesis in HCD but not in LCD. Fatty acid metabolism and ethanol production were significantly increased in LCD. Alpha-linolenic acid metabolism likely plays an important role in Cd detoxification in duckweed. These findings contribute to the understanding of Cd tolerance mechanisms in hyperaccumulator plants and lay the foundation for future phytoremediation studies.
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Affiliation(s)
- Gui-Li Yang
- Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), Collaborative Innovation Center for Mountain Ecology & Agro-Bioengineering (CICMEAB), College of Life Sciences/Institute of Agro-Bioengineering, Guizhou University, Guiyang 550025, China; (G.-L.Y.); (X.Y.); (Z.L.); (H.-M.L.); (Z.-J.L.); (H.-Y.G.); (Q.C.)
- Institute of Geochemistry, Chinese Academy of Sciences, Guiyang 550081, China;
| | - Lei Huang
- The Key Laboratory of Chemistry for Natural Products of Guizhou Province and Chinese Academy of Sciences, Guiyang 550014, China;
| | - Xiao Yang
- Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), Collaborative Innovation Center for Mountain Ecology & Agro-Bioengineering (CICMEAB), College of Life Sciences/Institute of Agro-Bioengineering, Guizhou University, Guiyang 550025, China; (G.-L.Y.); (X.Y.); (Z.L.); (H.-M.L.); (Z.-J.L.); (H.-Y.G.); (Q.C.)
| | - Zhu Li
- Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), Collaborative Innovation Center for Mountain Ecology & Agro-Bioengineering (CICMEAB), College of Life Sciences/Institute of Agro-Bioengineering, Guizhou University, Guiyang 550025, China; (G.-L.Y.); (X.Y.); (Z.L.); (H.-M.L.); (Z.-J.L.); (H.-Y.G.); (Q.C.)
| | - Hai-Min Liao
- Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), Collaborative Innovation Center for Mountain Ecology & Agro-Bioengineering (CICMEAB), College of Life Sciences/Institute of Agro-Bioengineering, Guizhou University, Guiyang 550025, China; (G.-L.Y.); (X.Y.); (Z.L.); (H.-M.L.); (Z.-J.L.); (H.-Y.G.); (Q.C.)
| | - Kang Mao
- Institute of Geochemistry, Chinese Academy of Sciences, Guiyang 550081, China;
| | - Zhao-Ju Liu
- Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), Collaborative Innovation Center for Mountain Ecology & Agro-Bioengineering (CICMEAB), College of Life Sciences/Institute of Agro-Bioengineering, Guizhou University, Guiyang 550025, China; (G.-L.Y.); (X.Y.); (Z.L.); (H.-M.L.); (Z.-J.L.); (H.-Y.G.); (Q.C.)
| | - He-Yan Geng
- Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), Collaborative Innovation Center for Mountain Ecology & Agro-Bioengineering (CICMEAB), College of Life Sciences/Institute of Agro-Bioengineering, Guizhou University, Guiyang 550025, China; (G.-L.Y.); (X.Y.); (Z.L.); (H.-M.L.); (Z.-J.L.); (H.-Y.G.); (Q.C.)
| | - Qin Cao
- Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), Collaborative Innovation Center for Mountain Ecology & Agro-Bioengineering (CICMEAB), College of Life Sciences/Institute of Agro-Bioengineering, Guizhou University, Guiyang 550025, China; (G.-L.Y.); (X.Y.); (Z.L.); (H.-M.L.); (Z.-J.L.); (H.-Y.G.); (Q.C.)
| | - Ai-Juan Tan
- Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), Collaborative Innovation Center for Mountain Ecology & Agro-Bioengineering (CICMEAB), College of Life Sciences/Institute of Agro-Bioengineering, Guizhou University, Guiyang 550025, China; (G.-L.Y.); (X.Y.); (Z.L.); (H.-M.L.); (Z.-J.L.); (H.-Y.G.); (Q.C.)
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Song R, Yan B, Xie J, Zhou L, Xu R, Zhou JM, Ji XH, Yi ZL. Comparative proteome profiles of Polygonatum cyrtonema Hua rhizomes (Rhizoma Ploygonati) in response to different levels of cadmium stress. BMC PLANT BIOLOGY 2023; 23:149. [PMID: 36935490 PMCID: PMC10026435 DOI: 10.1186/s12870-023-04162-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/30/2022] [Accepted: 03/10/2023] [Indexed: 06/18/2023]
Abstract
BACKGROUND The Polygonatum cyrtonema Hua rhizomes (also known as Rhizoma Polygonati, RP) are consumed for their health benefits. The main source of the RP is wild P. cyrtonema populations in the Hunan province of China. However, the soil Cadmium (Cd) content in Huanan is increasing, thus increasing the risks of Cd accumulation in RP which may end up in the human food chain. To understand the mechanism of Cd accumulation and resistance in P. cyrtonema, we subjected P. cyrtonema plants to four levels of Cd stress [(D2) 1, (D3) 2, (D4) 4, and (D5) 8 mg/kg)] compared to (D1) 0.5 mg/kg. RESULTS The increase in soil Cd content up to 4 mg/kg resulted in a significant increase in tissue (root hair, rhizome, stem, and leaf) Cd content. The increase in Cd concentration variably affected the antioxidant enzyme activities. We could identify 14,171 and 12,115 protein groups and peptides, respectively. There were 193, 227, 260, and 163 differentially expressed proteins (DEPs) in D2, D3, D4, and D5, respectively, compared to D1. The number of downregulated DEPs increased with an increase in Cd content up to 4 mg/kg. These downregulated proteins belonged to sugar biosynthesis, amino acid biosynthesis-related pathways, and secondary metabolism-related pathways. Our results indicate that Cd stress increases ROS generation, against which, different ROS scavenging proteins are upregulated in P. cyrtonema. Moreover, Cd stress affected the expression of lipid transport and assembly, glycolysis/gluconeogenesis, sugar biosynthesis, and ATP generation. CONCLUSION These results suggest that an increase in soil Cd content may end up in Huangjing. Cadmium stress initiates expression changes in multiple pathways related to energy metabolism, sugar biosynthesis, and secondary metabolite biosynthesis. The proteins involved in these pathways are potential candidates for manipulation and development of Cd stress-tolerant genotypes.
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Affiliation(s)
- Rong Song
- College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, 410128, Hunan, China
- Institute of Agricultural Environment and Ecology, Hunan Academy of Agricultural Sciences, Changsha, 410125, Hunan, China
| | - Bei Yan
- College of Plant Protection, Hunan Agricultural University, Changsha, 410128, Hunan, China
| | - Jin Xie
- Institute of Agricultural Environment and Ecology, Hunan Academy of Agricultural Sciences, Changsha, 410125, Hunan, China
| | - Li Zhou
- Institute of Agricultural Environment and Ecology, Hunan Academy of Agricultural Sciences, Changsha, 410125, Hunan, China
| | - Rui Xu
- Institute of Agricultural Environment and Ecology, Hunan Academy of Agricultural Sciences, Changsha, 410125, Hunan, China
| | - Jia Min Zhou
- Institute of Agricultural Environment and Ecology, Hunan Academy of Agricultural Sciences, Changsha, 410125, Hunan, China
| | - Xiong Hui Ji
- Institute of Agricultural Environment and Ecology, Hunan Academy of Agricultural Sciences, Changsha, 410125, Hunan, China
| | - Zi Li Yi
- College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, 410128, Hunan, China.
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Structural Characterization of Polysaccharides from Coriandrum sativum Seeds: Hepatoprotective Effect against Cadmium Toxicity In Vivo. Antioxidants (Basel) 2023; 12:antiox12020455. [PMID: 36830010 PMCID: PMC9952120 DOI: 10.3390/antiox12020455] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2022] [Revised: 01/20/2023] [Accepted: 02/02/2023] [Indexed: 02/15/2023] Open
Abstract
Coriandrum sativum is one of the most widespread curative plants in the world, being vastly cultivated in arid and semi-arid regions as one of the oldest spice plants. The present study explored the extraction of polysaccharides from Coriandrum sativum seeds and the evaluation of their antioxidant potential and hepatoprotective effects in vivo. The polysaccharide from coriander seeds was extracted, and the structural characterization was performed by FT-IR, UV-vis, DSC, NMR (1D and 2D), GC-MS, and SEC analysis. The polysaccharide extracted from Coriandrum sativum (CPS) seeds was characterized to evaluate its antioxidant and hepatoprotective capacities in rats. Results showed that CPS was composed of arabinose, rhamnose, xylose, mannose, fructose, galactose, and glucose in molar percentages of 6.2%, 3.6%, 8.8%, 17.7%, 5.2%, 32.9%, and 25.6%, respectively. Further, CPS significantly hindered cadmium-induced oxidation damage and exercised a protective effect against Cd hepatocytotoxicity, with a considerable reduction in MDA production and interesting CAT and SOD enzyme levels. Results suggest that CPS might be employed as a natural antioxidant source.
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