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Georgiadis D, Sornette D. Pattern phase diagram of spiking neurons on spatial networks. Phys Rev E 2019; 99:042410. [PMID: 31108692 DOI: 10.1103/physreve.99.042410] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2018] [Indexed: 06/09/2023]
Abstract
We study an abstracted model of neuronal activity via numerical simulation and report spatiotemporal pattern formation and criticallike dynamics. A population of pulse coupled, discretized, relaxation oscillators is simulated over networks with varying edge density and spatial embeddedness. For intermediate edge density and sufficiently strong spatial embeddedness, we observe a spatiotemporal pattern in the field of oscillator phases, visually resembling the surface of a frothing liquid. Increasing the edge density results in a distribution of neuronal avalanche sizes which follows a power law with exponent one (Zipf's law). Further increasing edge density yields metastability between pattern formation and synchronization, before transitioning entirely into synchrony.
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Affiliation(s)
- Dionysios Georgiadis
- Future Resilient Systems, Singapore and Department of Management, Technology and Economics, ETH Zurich, Switzerland
| | - Didier Sornette
- Department of Management, Technology and Economics, ETH Zurich, Switzerland
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Ashwin P, Coombes S, Nicks R. Mathematical Frameworks for Oscillatory Network Dynamics in Neuroscience. JOURNAL OF MATHEMATICAL NEUROSCIENCE 2016; 6:2. [PMID: 26739133 PMCID: PMC4703605 DOI: 10.1186/s13408-015-0033-6] [Citation(s) in RCA: 104] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/07/2015] [Accepted: 10/30/2015] [Indexed: 05/20/2023]
Abstract
The tools of weakly coupled phase oscillator theory have had a profound impact on the neuroscience community, providing insight into a variety of network behaviours ranging from central pattern generation to synchronisation, as well as predicting novel network states such as chimeras. However, there are many instances where this theory is expected to break down, say in the presence of strong coupling, or must be carefully interpreted, as in the presence of stochastic forcing. There are also surprises in the dynamical complexity of the attractors that can robustly appear-for example, heteroclinic network attractors. In this review we present a set of mathematical tools that are suitable for addressing the dynamics of oscillatory neural networks, broadening from a standard phase oscillator perspective to provide a practical framework for further successful applications of mathematics to understanding network dynamics in neuroscience.
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Affiliation(s)
- Peter Ashwin
- Centre for Systems Dynamics and Control, College of Engineering, Mathematics and Physical Sciences, University of Exeter, Harrison Building, Exeter, EX4 4QF, UK.
| | - Stephen Coombes
- School of Mathematical Sciences, University of Nottingham, University Park, Nottingham, NG7 2RD, UK.
| | - Rachel Nicks
- School of Mathematics, University of Birmingham, Watson Building, Birmingham, B15 2TT, UK.
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Newhall KA, Shkarayev MS, Kramer PR, Kovačič G, Cai D. Synchrony in stochastically driven neuronal networks with complex topologies. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2015; 91:052806. [PMID: 26066211 DOI: 10.1103/physreve.91.052806] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2014] [Indexed: 06/04/2023]
Abstract
We study the synchronization of a stochastically driven, current-based, integrate-and-fire neuronal model on a preferential-attachment network with scale-free characteristics and high clustering. The synchrony is induced by cascading total firing events where every neuron in the network fires at the same instant of time. We show that in the regime where the system remains in this highly synchronous state, the firing rate of the network is completely independent of the synaptic coupling, and depends solely on the external drive. On the other hand, the ability for the network to maintain synchrony depends on a balance between the fluctuations of the external input and the synaptic coupling strength. In order to accurately predict the probability of repeated cascading total firing events, we go beyond mean-field and treelike approximations and conduct a detailed second-order calculation taking into account local clustering. Our explicit analytical results are shown to give excellent agreement with direct numerical simulations for the particular preferential-attachment network model investigated.
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Affiliation(s)
- Katherine A Newhall
- Department of Mathematics, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599-3250, USA
| | - Maxim S Shkarayev
- Department of Physics and Astronomy, Iowa State University, 12 Physics Hall, Ames, Iowa 50011-3160, USA
| | - Peter R Kramer
- Mathematical Sciences Department, Rensselaer Polytechnic Institute, 110 8th Street, Troy, New York 12180, USA
| | - Gregor Kovačič
- Mathematical Sciences Department, Rensselaer Polytechnic Institute, 110 8th Street, Troy, New York 12180, USA
| | - David Cai
- Courant Institute of Mathematical Sciences and Center for Neural Science, New York University, 251 Mercer Street, New York, New York 10012, USA
- Department of Mathematics, MOE-LSC and Institute of Natural Sciences, Shanghai Jiao Tong University, Dong Chuan Road 800, Shanghai 200240, China
- NYUAD Institute, New York University Abu Dhabi, P.O. Box 129188, Abu Dhabi, United Arab Emirates
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Wray CM, Bishop SR. Cascades on a stochastic pulse-coupled network. Sci Rep 2014; 4:6355. [PMID: 25213626 PMCID: PMC4161966 DOI: 10.1038/srep06355] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2014] [Accepted: 08/26/2014] [Indexed: 11/09/2022] Open
Abstract
While much recent research has focused on understanding isolated cascades of networks, less attention has been given to dynamical processes on networks exhibiting repeated cascades of opposing influence. An example of this is the dynamic behaviour of financial markets where cascades of buying and selling can occur, even over short timescales. To model these phenomena, a stochastic pulse-coupled oscillator network with upper and lower thresholds is described and analysed. Numerical confirmation of asynchronous and synchronous regimes of the system is presented, along with analytical identification of the fixed point state vector of the asynchronous mean field system. A lower bound for the finite system mean field critical value of network coupling probability is found that separates the asynchronous and synchronous regimes. For the low-dimensional mean field system, a closed-form equation is found for cascade size, in terms of the network coupling probability. Finally, a description of how this model can be applied to interacting agents in a financial market is provided.
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Affiliation(s)
- C. M. Wray
- Department of Mathematics, University College London Gower Street, London WCIE 6BT, UK
| | - S. R. Bishop
- Department of Mathematics, University College London Gower Street, London WCIE 6BT, UK
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Tien JH, Shuai Z, Eisenberg MC, van den Driessche P. Disease invasion on community networks with environmental pathogen movement. J Math Biol 2014; 70:1065-92. [PMID: 24792228 DOI: 10.1007/s00285-014-0791-x] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2013] [Revised: 04/14/2014] [Indexed: 01/08/2023]
Abstract
The ability of disease to invade a community network that is connected by environmental pathogen movement is examined. Each community is modeled by a susceptible-infectious-recovered (SIR) framework that includes an environmental pathogen reservoir, and the communities are connected by pathogen movement on a strongly connected, weighted, directed graph. Disease invasibility is determined by the basic reproduction number R(0) for the domain. The domain R(0) is computed through a Laurent series expansion, with perturbation parameter corresponding to the ratio of the pathogen decay rate to the rate of water movement. When movement is fast relative to decay, R(0) is determined by the product of two weighted averages of the community characteristics. The weights in these averages correspond to the network structure through the rooted spanning trees of the weighted, directed graph. Clustering of disease "hot spots" influences disease invasibility. In particular, clustering hot spots together according to a generalization of the group inverse of the Laplacian matrix facilitates disease invasion.
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Affiliation(s)
- Joseph H Tien
- Department of Mathematics, Ohio State University, Columbus, OH, 43210, USA,
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A coarse-grained framework for spiking neuronal networks: between homogeneity and synchrony. J Comput Neurosci 2013; 37:81-104. [DOI: 10.1007/s10827-013-0488-y] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2013] [Revised: 11/06/2013] [Accepted: 11/11/2013] [Indexed: 10/25/2022]
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O'Dea R, Crofts JJ, Kaiser M. Spreading dynamics on spatially constrained complex brain networks. J R Soc Interface 2013; 10:20130016. [PMID: 23407574 DOI: 10.1098/rsif.2013.0016] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
The study of dynamical systems defined on complex networks provides a natural framework with which to investigate myriad features of neural dynamics and has been widely undertaken. Typically, however, networks employed in theoretical studies bear little relation to the spatial embedding or connectivity of the neural networks that they attempt to replicate. Here, we employ detailed neuroimaging data to define a network whose spatial embedding represents accurately the folded structure of the cortical surface of a rat brain and investigate the propagation of activity over this network under simple spreading and connectivity rules. By comparison with standard network models with the same coarse statistics, we show that the cortical geometry influences profoundly the speed of propagation of activation through the network. Our conclusions are of high relevance to the theoretical modelling of epileptic seizure events and indicate that such studies which omit physiological network structure risk simplifying the dynamics in a potentially significant way.
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Affiliation(s)
- Reuben O'Dea
- School of Science and Technology, Nottingham Trent University, Nottingham NG11 8NS, UK.
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