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Malagarriga D, Pons AJ, Villa AEP. Complex temporal patterns processing by a neural mass model of a cortical column. Cogn Neurodyn 2019; 13:379-392. [PMID: 31354883 PMCID: PMC6624230 DOI: 10.1007/s11571-019-09531-2] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2018] [Revised: 03/05/2019] [Accepted: 04/02/2019] [Indexed: 12/22/2022] Open
Abstract
It is well known that neuronal networks are capable of transmitting complex spatiotemporal information in the form of precise sequences of neuronal discharges characterized by recurrent patterns. At the same time, the synchronized activity of large ensembles produces local field potentials that propagate through highly dynamic oscillatory waves, such that, at the whole brain scale, complex spatiotemporal dynamics of electroencephalographic (EEG) signals may be associated to sensorimotor decision making processes. Despite these experimental evidences, the link between highly temporally organized input patterns and EEG waves has not been studied in detail. Here, we use a neural mass model to investigate to what extent precise temporal information, carried by deterministic nonlinear attractor mappings, is filtered and transformed into fluctuations in phase, frequency and amplitude of oscillatory brain activity. The phase shift that we observe, when we drive the neural mass model with specific chaotic inputs, shows that the local field potential amplitude peak appears in less than one full cycle, thus allowing traveling waves to encode temporal information. After converting phase and amplitude changes obtained into point processes, we quantify input-output similarity following a threshold-filtering algorithm onto the amplitude wave peaks. Our analysis shows that the neural mass model has the capacity for gating the input signal and propagate selected temporal features of that signal. Finally, we discuss the effect of local excitatory/inhibitory balance on these results and how excitability in cortical columns, controlled by neuromodulatory innervation of the cerebral cortex, may contribute to set a fine tuning and gating of the information fed to the cortex.
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Affiliation(s)
- Daniel Malagarriga
- Departament de Física, Universitat Politècnica de Catalunya, Edifici Gaia, Rambla Sant Nebridi 22, 08222 Terrassa, Spain
- Neuroheuristic Research Group, University of Lausanne, 1015 Lausanne, Switzerland
| | - Antonio J. Pons
- Departament de Física, Universitat Politècnica de Catalunya, Edifici Gaia, Rambla Sant Nebridi 22, 08222 Terrassa, Spain
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Cutsuridis V. Memory Prosthesis: Is It Time for a Deep Neuromimetic Computing Approach? Front Neurosci 2019; 13:667. [PMID: 31333399 PMCID: PMC6624412 DOI: 10.3389/fnins.2019.00667] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2019] [Accepted: 06/11/2019] [Indexed: 11/13/2022] Open
Abstract
Memory loss, one of the most dreaded afflictions of the human condition, presents considerable burden on the world's health care system and it is recognized as a major challenge in the elderly. There are only a few neuromodulation treatments for memory dysfunctions. Open loop deep brain stimulation is such a treatment for memory improvement, but with limited success and conflicting results. In recent years closed-loop neuroprosthesis systems able to simultaneously record signals during behavioral tasks and generate with the use of internal neural factors the precise timing of stimulation patterns are presented as attractive alternatives and show promise in memory enhancement and restoration. A few such strides have already been made in both animals and humans, but with limited insights into their mechanisms of action. Here, I discuss why a deep neuromimetic computing approach linking multiple levels of description, mimicking the dynamics of brain circuits, interfaced with recording and stimulating electrodes could enhance the performance of current memory prosthesis systems, shed light into the neurobiology of learning and memory and accelerate the progress of memory prosthesis research. I propose what the necessary components (nodes, structure, connectivity, learning rules, and physiological responses) of such a deep neuromimetic model should be and what type of data are required to train/test its performance, so it can be used as a true substitute of damaged brain areas capable of restoring/enhancing their missing memory formation capabilities. Considerations to neural circuit targeting, tissue interfacing, electrode placement/implantation, and multi-network interactions in complex cognition are also provided.
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Foncelle A, Mendes A, Jędrzejewska-Szmek J, Valtcheva S, Berry H, Blackwell KT, Venance L. Modulation of Spike-Timing Dependent Plasticity: Towards the Inclusion of a Third Factor in Computational Models. Front Comput Neurosci 2018; 12:49. [PMID: 30018546 PMCID: PMC6037788 DOI: 10.3389/fncom.2018.00049] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2018] [Accepted: 06/06/2018] [Indexed: 11/13/2022] Open
Abstract
In spike-timing dependent plasticity (STDP) change in synaptic strength depends on the timing of pre- vs. postsynaptic spiking activity. Since STDP is in compliance with Hebb's postulate, it is considered one of the major mechanisms of memory storage and recall. STDP comprises a system of two coincidence detectors with N-methyl-D-aspartate receptor (NMDAR) activation often posited as one of the main components. Numerous studies have unveiled a third component of this coincidence detection system, namely neuromodulation and glia activity shaping STDP. Even though dopaminergic control of STDP has most often been reported, acetylcholine, noradrenaline, nitric oxide (NO), brain-derived neurotrophic factor (BDNF) or gamma-aminobutyric acid (GABA) also has been shown to effectively modulate STDP. Furthermore, it has been demonstrated that astrocytes, via the release or uptake of glutamate, gate STDP expression. At the most fundamental level, the timing properties of STDP are expected to depend on the spatiotemporal dynamics of the underlying signaling pathways. However in most cases, due to technical limitations experiments grant only indirect access to these pathways. Computational models carefully constrained by experiments, allow for a better qualitative understanding of the molecular basis of STDP and its regulation by neuromodulators. Recently, computational models of calcium dynamics and signaling pathway molecules have started to explore STDP emergence in ex and in vivo-like conditions. These models are expected to reproduce better at least part of the complex modulation of STDP as an emergent property of the underlying molecular pathways. Elucidation of the mechanisms underlying STDP modulation and its consequences on network dynamics is of critical importance and will allow better understanding of the major mechanisms of memory storage and recall both in health and disease.
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Affiliation(s)
- Alexandre Foncelle
- INRIA, Villeurbanne, France
- LIRIS UMR 5205 CNRS-INSA, University of Lyon, Villeurbanne, France
| | - Alexandre Mendes
- Dynamic and Pathophysiology of Neuronal Networks, Center for Interdisciplinary Research in Biology (CIRB), College de France, INSERM U1050, CNRS UMR7241, Labex Memolife, Paris, France
- University Pierre et Marie Curie, ED 158, Paris, France
| | | | - Silvana Valtcheva
- Dynamic and Pathophysiology of Neuronal Networks, Center for Interdisciplinary Research in Biology (CIRB), College de France, INSERM U1050, CNRS UMR7241, Labex Memolife, Paris, France
- University Pierre et Marie Curie, ED 158, Paris, France
| | - Hugues Berry
- INRIA, Villeurbanne, France
- LIRIS UMR 5205 CNRS-INSA, University of Lyon, Villeurbanne, France
| | - Kim T. Blackwell
- The Krasnow Institute for Advanced Studies, George Mason University, Fairfax, VA, United States
| | - Laurent Venance
- Dynamic and Pathophysiology of Neuronal Networks, Center for Interdisciplinary Research in Biology (CIRB), College de France, INSERM U1050, CNRS UMR7241, Labex Memolife, Paris, France
- University Pierre et Marie Curie, ED 158, Paris, France
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Saudargienė A, Graham BP. Inhibitory control of site-specific synaptic plasticity in a model CA1 pyramidal neuron. Biosystems 2015; 130:37-50. [PMID: 25769669 DOI: 10.1016/j.biosystems.2015.03.001] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2014] [Revised: 10/31/2014] [Accepted: 03/06/2015] [Indexed: 11/28/2022]
Abstract
A computational model of a biochemical network underlying synaptic plasticity is combined with simulated on-going electrical activity in a model of a hippocampal pyramidal neuron to study the impact of synapse location and inhibition on synaptic plasticity. The simulated pyramidal neuron is activated by the realistic stimulation protocol of causal and anticausal spike pairings of presynaptic and postsynaptic action potentials in the presence and absence of spatially targeted inhibition provided by basket, bistratified and oriens-lacunosum moleculare (OLM) interneurons. The resulting Spike-timing-dependent plasticity (STDP) curves depend strongly on the number of pairing repetitions, the synapse location and the timing and strength of inhibition.
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Affiliation(s)
- Aušra Saudargienė
- Department of Informatics, Vytautas Magnus University, Kaunas LT-44404, Lithuania.
| | - Bruce P Graham
- Computer Science and Mathematics, School of Natural Sciences, University of Stirling, Stirling FK9 4LA, UK
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Signal integration on the dendrites of a pyramidal neuron model. Cogn Neurodyn 2014; 8:81-5. [PMID: 24465288 DOI: 10.1007/s11571-013-9252-2] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2012] [Revised: 03/18/2013] [Accepted: 03/28/2013] [Indexed: 10/27/2022] Open
Abstract
This paper studied the synaptic and dendritic integration with different spatial distributions of synapses on the dendrites of a biophysically-detailed layer 5 pyramidal neuron model. It has been observed that temporally synchronous and spatially clustered synaptic inputs make dendrites perform a highly nonlinear integration. The effect of clustering degree of synaptic distribution on neuronal responsiveness is investigated by changing the number of top apical dendrites where active synapses are allocated. The neuron shows maximum responsiveness to synaptic inputs which have an intermediate clustering degree of spatial distribution, indicating complex interactions among dendrites with the existence of nonlinear synaptic and dendritic integrations.
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Cutsuridis V. Interaction of inhibition and triplets of excitatory spikes modulates the NMDA-R-mediated synaptic plasticity in a computational model of spike timing-dependent plasticity. Hippocampus 2012; 23:75-86. [PMID: 22851353 DOI: 10.1002/hipo.22057] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 07/05/2012] [Indexed: 02/03/2023]
Abstract
Spike timing-dependent plasticity (STDP) experiments have shown that a synapse is strengthened when a presynaptic spike precedes a postsynaptic one and depressed vice versa. The canonical form of STDP has been shown to have an asymmetric shape with the peak long-term potentiation at +6 ms and the peak long-term depression at -5 ms. Experiments in hippocampal cultures with more complex stimuli such as triplets (one presynaptic spike combined with two postsynaptic spikes or one postsynaptic spike with two presynaptic spikes) have shown that pre-post-pre spike triplets result in no change in synaptic strength, whereas post-pre-post spike triplets lead to significant potentiation. The sign and magnitude of STDP have also been experimentally hypothesized to be modulated by inhibition. Recently, a computational study showed that the asymmetrical form of STDP in the CA1 pyramidal cell dendrite when two spikes interact switches to a symmetrical one in the presence of inhibition under certain conditions. In the present study, I investigate computationally how inhibition modulates STDP in the CA1 pyramidal neuron dendrite when it is driven by triplets. The model uses calcium as the postsynaptic signaling agent for STDP and is shown to be consistent with the experimental triplet observations in the absence of inhibition: simulated pre-post-pre spike triplets result in no change in synaptic strength, whereas simulated post-pre-post spike triplets lead to significant potentiation. When inhibition is bounded by the onset and offset of the triplet stimulation, then the strength of the synapse is decreased as the strength of inhibition increases. When inhibition arrives either few milliseconds before or at the onset of the last spike in the pre-post-pre triplet stimulation, then the synapse is potentiated. Variability in the frequency of inhibition (50 vs. 100 Hz) produces no change in synaptic strength. Finally, a 5% variation in model's calcium parameters (calcium thresholds) proves that the model's performance is robust.
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