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Poddar Sarkar M, Biswas Raha A, Datta J, Mitra S. Chemotaxonomic and evolutionary perspectives of Bryophyta based on multivariate analysis of fatty acid fingerprints of Eastern Himalayan mosses. PROTOPLASMA 2022; 259:1125-1137. [PMID: 34787717 DOI: 10.1007/s00709-021-01723-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/21/2021] [Accepted: 11/01/2021] [Indexed: 06/13/2023]
Abstract
Bryophyta comprises one of the earliest lineages of land plants that had implemented remarkable innovations to their lipid metabolic systems for successful adaptation to terrestrial habitat. This study presents a comprehensive investigation of fatty acid profiles of mosses from Eastern Himalayas with an aim to trace their chemotaxonomic and evolutionary implications. Fatty acid compositions of 40 random mosses belonging to major families of Bryophyta were explored by gas chromatographic analysis. A diverse array of saturated, monounsaturated and polyunsaturated fatty acids including rare acetylenic fatty acids were detected. Hexadecanoic acid (C16:0), 9,12 (Z,Z)-octadecadienoic acid (C18:2n6) and 9,12,15 (Z,Z,Z)-octadecatrienoic acid (C18:3n3) were the predominant fatty acids in all the mosses. However, quantitative variation of C20 polyunsaturated fatty acids (PUFAs), specifically 5,8,11,14 (Z,Z,Z,Z)-eicosatetraenoic acid (C20:4n6), among the investigated mosses was the most prominent outcome. The diplolepidous members of Bryidae, especially the mosses of Hypnales, Bryales and Bartramiales contained higher amount of C20 PUFAs compared with the haplolepidous orders. Principal component analyses based on individual fatty acids and other related parameters validated C20:4n6 content and the ratio of C20:4n6/C18:2n6 as the apparent chemotaxonomic discriminants. The prevalent notion of considering 9,12,15-octadecatrien-6-ynoic acid (C18:4a) as the chemomarker of Dicranaceae has also been challenged, since the compound was detected not only in different families of Dicranales, but also in a Pottiales member, Leptodontium viticulosoides. Therefore, an ensemble of fatty acids instead of a single one can be considered as the chemical signature for taxonomic interpretation which may also be vital from an evolutionary standpoint.
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Affiliation(s)
- Mousumi Poddar Sarkar
- Department of Life Sciences, Presidency University, 86/1 College Street, Kolkata, 700073, West Bengal, India
| | - Anashuya Biswas Raha
- Department of Botany, Diamond Harbour Women's University, Diamond Harbour Road, Sarisha, South 24 Parganas, Sarisha, 743368, West Bengal, India
| | - Jayashree Datta
- Department of Life Sciences, Presidency University, 86/1 College Street, Kolkata, 700073, West Bengal, India
| | - Souvik Mitra
- Department of Botany, Darjeeling Government College, 19, Lebong Cart Road, Darjeeling, 734101, West Bengal, India.
- Department of Botany, Taki Government College, North 24 Parganas, Taki, 743429, West Bengal, India.
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Soh YNA, Kunacheva C, Webster RD, Stuckey DC. Composition and biotransformational changes in soluble microbial products (SMPs) along an anaerobic baffled reactor (ABR). CHEMOSPHERE 2020; 254:126775. [PMID: 32320833 DOI: 10.1016/j.chemosphere.2020.126775] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/26/2019] [Revised: 04/09/2020] [Accepted: 04/10/2020] [Indexed: 06/11/2023]
Abstract
This work examined the production and catabolism/biotransformation dynamics of SMPs down the length of an eight-compartment-anaerobic baffled reactor (ABR) which physically separates the biological processes, in contrast to completely mixed reactors which do not enable these dynamics to measured, and this is totally novel. SMPs were extracted and characterised by gas and liquid chromatography coupled mass spectrometry to determine their composition and production/catabolism. 60%-70% of the feed compounds decreased from the first to fourth compartment; the increase in SMPs after the fourth compartment suggested a mixture of degraded and biotransformed compounds, and microbial products. High concentrations of low MW alkanes and alkenes, and higher MW (up to 2000 Da) lipids and amino acid derivatives accumulate in the last compartment at pseudo-steady state, and past work identifying polysaccharides/peptides as major membrane biofoulants have excluded these lipids. In addition, lipids and changes detected during feed transients have not been noted before in previous work. Finally, feed step-increases also increased some amino acid derivatives used in cell-signalling. Interestingly, some natural products from plant and fungal extracts were also found in the fourth compartment, where methanogenesis was the dominant process.
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Affiliation(s)
- Yan Ni Annie Soh
- Advanced Environmental Biotechnology Centre, Nanyang Environment & Water Research Institute, Nanyang Technological University, 1 Cleantech Loop, Clean Tech One, Singapore, 637141, Singapore; Interdisciplinary Graduate Programme, Graduate College, Nanyang Technological University, 61 Nanyang Drive, Academic Block North, ABN-01b-11, Singapore, 637335, Singapore
| | - Chinagarn Kunacheva
- Advanced Environmental Biotechnology Centre, Nanyang Environment & Water Research Institute, Nanyang Technological University, 1 Cleantech Loop, Clean Tech One, Singapore, 637141, Singapore
| | - Richard D Webster
- Division of Chemistry and Biological Chemistry, School of Physical & Mathematical Sciences, Nanyang Technological University, 21 Nanyang Link, Singapore, 637371, Singapore
| | - David C Stuckey
- Advanced Environmental Biotechnology Centre, Nanyang Environment & Water Research Institute, Nanyang Technological University, 1 Cleantech Loop, Clean Tech One, Singapore, 637141, Singapore; Department of Chemical Engineering, Imperial College London, SW7 2AZ, UK.
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Roy Chowdhuri S, Biswas Raha A, Mitra S, Datta J, Poddar Sarkar M. "Dicranin" in the Membrane Phospholipids of a Dicranaceae and Pottiaceae Moss Member of the Eastern Himalayan Biodiversity Hotspot. Lipids 2018; 53:539-545. [PMID: 30070366 DOI: 10.1002/lipd.12054] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2018] [Revised: 05/19/2018] [Accepted: 06/05/2018] [Indexed: 11/06/2022]
Abstract
The phospholipids of two moss samples Oreoweisia laxifolia (Hookf.) Kindb. (family-Dicranaceae Schimp.) and Leptodontium viticulosoides (P. Beauv.) Wijk & Margad (family-Pottiaceae Schimp.) of the Eastern Himalayan Biodiversity Hotspot were investigated to find out any peculiarity in their fatty acid profiles. Detailed analysis of phospholipid classes and the respective fatty acids was performed using high-performance thin-layer chromatography and gas chromatography-mass spectrometry. An array of different saturated and unsaturated fatty acids were detected in both the samples. Although it has been proposed previously that acetylenic fatty acids are associated only with triacylglycerol of storage lipids, the most striking observation of the present investigation is the abundance of an acetylenic fatty acid, octadeca-6-yn-9,12,15-trienoic acid (18:4a), or Dicranin, in the phospholipids of both the mosses. The position of the triple bond in the hydrocarbon chain of the fatty acids was confirmed by dimethyloxazoline derivatization of fatty acids and their characteristic mass fragmentation pattern. The occurrence of Dicranin in phospholipids and in the Pottiaceae family is reported for the first time, with substantial explanations of the observed results. This may raise the issue of rethinking "Dicranin" as a chemotaxonomic marker of Dicranaceae.
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Affiliation(s)
- Sumedha Roy Chowdhuri
- Chemical Signal and Lipidomics Laboratory, Department of Botany, Centre of Advanced Study, University of Calcutta, 35, Ballygunge Circular Road, Kolkata, 700019, India
| | - Anashuya Biswas Raha
- Chemical Signal and Lipidomics Laboratory, Department of Botany, Centre of Advanced Study, University of Calcutta, 35, Ballygunge Circular Road, Kolkata, 700019, India
| | - Souvik Mitra
- Department of Botany, Darjeeling Government College, Lebong Cart Rd, Richmond Hill, Darjeeling, 734101, India
| | - Jayashree Datta
- Chemical Signal and Lipidomics Laboratory, Department of Botany, Centre of Advanced Study, University of Calcutta, 35, Ballygunge Circular Road, Kolkata, 700019, India
| | - Mousumi Poddar Sarkar
- Chemical Signal and Lipidomics Laboratory, Department of Botany, Centre of Advanced Study, University of Calcutta, 35, Ballygunge Circular Road, Kolkata, 700019, India
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Mitra S, Burger BV, Poddar-Sarkar M. Comparison of headspace-oxylipin-volatilomes of some Eastern Himalayan mosses extracted by sample enrichment probe and analysed by gas chromatography-mass spectrometry. PROTOPLASMA 2017; 254:1115-1126. [PMID: 27704278 DOI: 10.1007/s00709-016-1018-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2016] [Accepted: 08/17/2016] [Indexed: 06/06/2023]
Abstract
Mosses have an inherent adaptability against different biotic and abiotic stresses. Oxylipins, the volatile metabolites derived from polyunsaturated fatty acids (PUFAs), play a key role in the chemical defence strategy of mosses. In the present study, a comparative survey of these compounds, including an investigation into their precursor fatty acids (FAs), was carried out for the first time on the mosses Brachymenium capitulatum (Mitt.) Paris, Hydrogonium consanguineum (Thwaites & Mitt.) Hilp., Barbula hastata Mitt., and Octoblepharum albidum Hedw. collected from the Eastern Himalayan Biodiversity hotspot. Their headspace volatiles were sampled using a high-efficiency sample enrichment probe (SEP) and were characterized by gas chromatography-mass spectrometric analysis. FAs from neutral lipid (NL) and phospholipid (PL) fractions were also evaluated. Analysis of the oxylipin volatilome revealed the generation of diverse metabolites from C5 to C18, dominated by alkanes, alkenes, saturated and unsaturated alcohols, aldehydes, ketones and cyclic compounds, with pronounced structural variations. The C6 and C8 compounds dominated the total volatilome of all the samples. Analyses of FAs from membrane PL and storage NL highlighted the involvement of C18 and C20 PUFAs in oxylipin generation. The volatilome of each moss is characterized by a 'signature oxylipin mixture'. Quantitative differences in the C6 and C8 metabolites indicate their phylogenetic significance.
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Affiliation(s)
- Souvik Mitra
- Post Graduate Department of Botany, Darjeeling Government College, Darjeeling, 734101, India
| | - Barend V Burger
- Department of Chemistry and Polymer Science, University of Stellenbosch, Private Bag X1, Matieland, 7602, South Africa
| | - Mousumi Poddar-Sarkar
- Department of Botany (Centre of Advanced Study), Chemical Signal and Lipidomics Laboratory, University of Calcutta, 35-Ballygunge Circular Road, Kolkata, 700019, India.
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