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Li W, Zhao T. Borophene as an carrier for mercaptopurine drug: electronic study via density-functional theory computations. J Mol Model 2023; 29:325. [PMID: 37747575 DOI: 10.1007/s00894-023-05724-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2023] [Accepted: 09/11/2023] [Indexed: 09/26/2023]
Abstract
CONTEXT This paper studied MP-B36 interactions through DFT. MP molecules were observed to have a substantial tendency to be adsorbed through their N heads onto B36 at its edge, based on large adsorption energy values. The B atoms at the edges of B36 nanosheets showed higher reactivity than the internal B atoms toward MP. The electronic properties changed upon MP adsorption. The MP-B36 configurations of the highest stability underwent an energy gap reduction of 11-47%. Natural bond orbital (NBO) analysis and molecular electrostatic potential (MEP) analysis were used to evaluate the MP-B36 interaction. METHODS The configurations were subjected to geometric optimization at the TPSSH/6-31 + G(d) level of theory, at which frequency analysis was carried out to evaluate the stationary points. These configurations were neutral (Q = 0). The electronic properties of MP dramatically changed upon its interaction with B36 nanosheets. The stable configurations underwent an energy gap reduction, suggesting a chemical signal. The MP molecules were observed to be effectively adsorbed onto the B36 edge within aqueous phases. The MP-B36 configurations were estimated to have relatively large dipole moments. This demonstrated that MP-B36 systems were soluble and dispersed within solar media (e.g., water). It was concluded that B36 nanosheets could serve as efficient MP carriers in nanomedical drug delivery applications.
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Affiliation(s)
- Wei Li
- Department of Pharmacy, Renmin Hospital, Hubei University of Medicine, Shiyan, Hubei, 442000, P.R. China
| | - Tinghu Zhao
- Department of Orthopaedics, Renmin Hospital, Hubei University of Medicine, Shiyan, Hubei, 442000, P.R. China.
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2
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Opto-Electronic Properties of Quasi-Planar Boron clusters – A DFT Investigation. Chem Phys Lett 2022. [DOI: 10.1016/j.cplett.2022.139914] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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3
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DFT exploration of adsorptive performances of borophene to small sulfur-containing gases. J Mol Model 2022; 28:146. [PMID: 35554690 DOI: 10.1007/s00894-022-05145-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2022] [Accepted: 05/03/2022] [Indexed: 10/18/2022]
Abstract
Density functional theory (DFT) calculations were applied to study the ability of B36 to adsorb H2S, SO2, SO3, CH3SH, (CH3)2S, and C4H4S gases. Several exchange-correlation including B97D, PBE, B3LYP, M062X, and WB97XD were utilized to evaluate adsorption energies. The initial results showed that boundary boron atoms are the most appropriate interaction sites. The adsorption energies, electron density, electron localized function, and differential charge density plots confirmed the formation of chemical covalent bonds only between SOx and B36. The results of thermochemistry analysis revealed the exothermic nature of the adsorption of sulfur-containing gases on B36; the highest values of ∆H298 were found for SO3/B36 and SO2/B36 systems. The electronic absorption spectra and DOS of B36 did not exhibit significant variations after gases adsorption, while the modeled CD spectra showed a remarkable change in the case of the SOx/B36 system. Accordingly, B36 is not suggested for detecting the studied gases. The effect of imposing mono vacancy defect and external electric field to the adsorption of titled gases on the sorbent showed, while the former did not affect the adsorption energies significantly the later improved the adsorption of gas molecules on the B36 system. The results of the current study could provide deeper molecular insight on the removal of SOx gases by B36 system.
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4
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Ta LT, Hamada I, Morikawa Y, Dinh VA. Adsorption of toxic gases on borophene: surface deformation links to chemisorptions. RSC Adv 2021; 11:18279-18287. [PMID: 35480898 PMCID: PMC9033448 DOI: 10.1039/d1ra02738g] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2021] [Accepted: 05/14/2021] [Indexed: 11/25/2022] Open
Abstract
β12 borophene has received great attention because of its intriguing mechanical and electronic properties. One of the possible applications of borophene is gas sensing. However, the interaction between common gases and β12 borophene remains to be clarified. In this work, we study the interactions of β12 borophene towards five hazardous gases, namely, CO, NO, NH3, NO2, and CO2 using various non-empirical van der Waals density functionals and provide an insight into the adsorption behavior of borophene. The adsorption mechanism and molecular vibrations are discussed in great detail. Among the gases considered, CO2 is physisorbed while other gases are chemically bonded to β12 borophene. We also demonstrate that the deformation at the ridge of borophene enables its active pz orbital to strongly hybridize with frontier orbitals of the studied polar gases. Consequently, borophene is predicted to interact strongly with CO, NO, NH3, and especially NO2, making it a sensitive sensing material for toxic gases. β12 borophene has received great attention because of its intriguing mechanical and electronic properties. One of the possible applications of borophene is gas sensing.![]()
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Affiliation(s)
- Luong Thi Ta
- Department of Precision Engineering, Graduate School of Engineering, Osaka University 2-1, Yamadaoka Suita Osaka 565-0871 Japan .,Nanotechnology Program, VNU Vietnam Japan University Luu Huu Phuoc Str., My Dinh I, Nam Tu Liem Hanoi, 100000 Vietnam .,Department of Chemistry, Institute of Environment, Vietnam Maritime University Le Chan Haiphong, 18000 Vietnam
| | - Ikutaro Hamada
- Department of Precision Engineering, Graduate School of Engineering, Osaka University 2-1, Yamadaoka Suita Osaka 565-0871 Japan .,Elements Strategy Initiative for Catalysts and Batteries (ESICB), Kyoto University Goryo-Ohara, Nishikyo-ku Kyoto 615-8245 Japan
| | - Yoshitada Morikawa
- Department of Precision Engineering, Graduate School of Engineering, Osaka University 2-1, Yamadaoka Suita Osaka 565-0871 Japan .,Elements Strategy Initiative for Catalysts and Batteries (ESICB), Kyoto University Goryo-Ohara, Nishikyo-ku Kyoto 615-8245 Japan.,Research Center for Precision Engineering, Graduate School of Engineering, Osaka University 2-1 Yamadaoka Suita Osaka 565-0871 Japan
| | - Van An Dinh
- Nanotechnology Program, VNU Vietnam Japan University Luu Huu Phuoc Str., My Dinh I, Nam Tu Liem Hanoi, 100000 Vietnam .,Center for Atomic and Molecular Technologies, Graduate School of Engineering, Osaka University 2-1 Yamadaoka Suita Osaka 565-0871 Japan
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5
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Ploysongsri N, Ruangpornvisuti V. Adsorption of sulfur-containing gases on B36 nanocluster: a DFT study. J Sulphur Chem 2021. [DOI: 10.1080/17415993.2021.1895160] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Nontawat Ploysongsri
- Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok, Thailand
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6
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Arabieh M, Zahedi M. The effect of external electric field and metal impurities on the interaction of HF and boraphene: a computational study. J Mol Model 2021; 27:50. [PMID: 33501589 DOI: 10.1007/s00894-021-04684-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2020] [Accepted: 01/19/2021] [Indexed: 12/01/2022]
Abstract
Using density functional theory, the effects of P, Al, and Ga atoms doping on electronic structure of boraphene (B36) were investigated. The results show the highest change in electronic structure of doped-B36 systems belongs to Al-B36 structures wherein the gap energy of the system is decreased by 17.92%. DOS diagrams and absorption spectra of doped B36 are compared to pristine and discussed. The capability of pristine and modified B36 in the field of detection/adsorption of HF molecule has been evaluated. The calculated values of adsorption energies of 0.13, 0.63, 0.24, and 0.16 eV for adsorption of HF on pristine, Al-, Ga-, and P-B36 and related DOS diagrams reveal that these systems are not superior host materials for detection/adsorption applications. It was found that the external electric field could increase the interaction between HF and B36 systems leading to suggesting Al-B36 as proper candidate for HF removal applications.
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Affiliation(s)
- Masoud Arabieh
- Nuclear Science and Technology Research Institute (NSTRI), Tehran, Iran.
| | - Mansour Zahedi
- Faculty of Chemistry Science and Oil, Shahid Beheshti University G.C, Tehran, Iran
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7
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Li Z, Zhao Z, Shen X, Wang Q. The selectivity of the transition metal encapsulated in fullerene-like B36 clusters. Chem Phys Lett 2020. [DOI: 10.1016/j.cplett.2020.137876] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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8
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Quasi-planar B 36 boron cluster: a new potential basis for ammonia detection. J Mol Model 2020; 26:263. [PMID: 32909082 DOI: 10.1007/s00894-020-04486-2] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2020] [Accepted: 07/27/2020] [Indexed: 10/23/2022]
Abstract
Detection of NH3 at a trace level is nowadays of great importance. Here, we investigate the reactivity and sensitivity of a B36 borophene toward NH3 gas employing DFT calculations. The energetic results point out that the adsorption process strongly depends on the orientation of NH3 relative to the B36 sheet. An NH3 molecule preferentially interacts via its N-head with a B atom of the B36 with a change of enthalpy of - 90.5 kJ/mol at room temperature and 1 atm. Mulliken charges analysis results reveal that approximately 0.35 |e| transfers from NH3 to the B36, leaving partially positive NH3. We found that the B36 electronic properties are meaningfully sensitive to the NH3 gas, and it may be a sign of further usage of B36 as a potential NH3 gas sensor. The density of state analysis shows that the B36 gap is expressively decreased from 1.55 to 1.35 eV, increasing its electrical conductance.
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Hossain MA, Hossain MR, Hossain MK, Khandaker JI, Ahmed F, Ferdous T, Hossain MA. An ab initio study of the B35 boron nanocluster for application as atmospheric gas (NO,NO2,N2O,NH3) sensor. Chem Phys Lett 2020. [DOI: 10.1016/j.cplett.2020.137701] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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10
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Jha RK, Nanda A, Bhat N. Boron nanostructures obtained via ultrasonic irradiation for high performance chemiresistive methane sensors. NANOSCALE ADVANCES 2020; 2:1837-1842. [PMID: 36132512 PMCID: PMC9417492 DOI: 10.1039/c9na00749k] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/28/2019] [Accepted: 03/09/2020] [Indexed: 05/05/2023]
Abstract
We report on a chemiresistive gas sensor using boron nanostructures as the sensing layer, to detect methane gas down to 50 ppm. The sensor showed an excellent response of 43.5-153.1% for a methane concentration of 50 ppm to 105 ppm, with linear behaviour and good response and recovery time. The stability, repeatability, reproducibility, and shelf life of the sensor are promising for next generation methane gas detection.
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Affiliation(s)
- Ravindra Kumar Jha
- Nano-Devices and Sensors Laboratory, Centre for Nano Science and Engineering, Indian Institute of Science Bangalore India-560012
| | - Aman Nanda
- Nano-Devices and Sensors Laboratory, Centre for Nano Science and Engineering, Indian Institute of Science Bangalore India-560012
| | - Navakanta Bhat
- Nano-Devices and Sensors Laboratory, Centre for Nano Science and Engineering, Indian Institute of Science Bangalore India-560012
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11
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Allal H, Belhocine Y, Rahali S, Damous M, Ammouchi N. Structural, electronic, and energetic investigations of acrolein adsorption on B 36 borophene nanosheet: a dispersion-corrected DFT insight. J Mol Model 2020; 26:128. [PMID: 32388759 DOI: 10.1007/s00894-020-04388-3] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2020] [Accepted: 04/22/2020] [Indexed: 12/12/2022]
Abstract
The adsorption of acrolein (AC) onto the surface of B36 borophene nanosheet was studied using dispersion-corrected density functional theory (DFT). The structural and electronic properties were scrutinized by several quantum chemical parameters such as HOMO-LUMO gap, condensed Fukui function, molecular electrostatic potential (ESP), and the density of states (DOS). The non-covalent interactions (NCI) were explored by combined reduced density gradient (RDG-NCI) and energy decomposition analysis (EDA) techniques. It was found that the adsorption of acrolein on both convex and concave surfaces of borophene is mainly governed by van der Waals interactions. Our calculations showed that the adsorption energy is strengthened and favored when multiple acrolein molecules adsorb on the edge sides of borophene through their terminal carbonyl oxygen atom. Furthermore, the calculated HOMO-LUMO energy gaps were significantly reduced upon adsorption affecting, therefore, the electrical conductance of borophene. These results should be useful in designing acrolein sensors.
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Affiliation(s)
- Hamza Allal
- Department of Technology, Faculty of Technology, 20 August 1955 University of Skikda, P.O. Box 26, El Hadaik Road, 21000, Skikda, Algeria.
| | - Youghourta Belhocine
- Department of Petrochemical and Process Engineering, 20 August 1955 University of Skikda, P.O. Box 26, El Hadaik Road, 21000, Skikda, Algeria
| | - Seyfeddine Rahali
- Department of Chemistry, College of Science & Arts at Al-Rass, Qassim University, P.O. 53, Buraydah, Saudi Arabia
| | - Maamar Damous
- Department of Petrochemical and Process Engineering, 20 August 1955 University of Skikda, P.O. Box 26, El Hadaik Road, 21000, Skikda, Algeria.,Unité de Recherche de Chimie de l'Environnement et Moléculaire Structurale, CHEMS, Université Constantine 1, 25000, Constantine, Algeria
| | - Nesrine Ammouchi
- Department of Technology, Faculty of Technology, 20 August 1955 University of Skikda, P.O. Box 26, El Hadaik Road, 21000, Skikda, Algeria
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12
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Santos-Putungan AB, Stojić N, Binggeli N, Paraan FNC. Strong chemisorption of CO 2 on B 10-B 13 planar-type clusters. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2019; 31:145504. [PMID: 30645990 DOI: 10.1088/1361-648x/aafebd] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
An ab initio density functional study was performed investigating the adsorption of CO2 on neutral boron B n (n = 10-13) clusters that are characterized by planar and quasiplanar ground-state atomic structures. For all four clusters, we found large chemisorption binding energies, reaching 1.6 eV between CO2 and B12, with the adsorbed molecule oriented in the plane of the cluster and adsorbed along the cluster edge. A configuration with chemisorbed dissociated CO2 molecule also exists for B11 and B13 clusters. The strong adsorption is due to the bending of the CO2 molecule, which provides energetically accessible fully in-plane frontier molecular orbitals matching the edge states of the clusters. At the same time, the intrinsic dipole moment of a bent CO2 molecule facilitates the transfer of excess electronic charge from the cluster edges to the molecule.
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Affiliation(s)
- Alexandra B Santos-Putungan
- Materials Science and Engineering Program, University of the Philippines Diliman, Quezon City, The Philippines. Institute of Mathematical Sciences and Physics, University of the Philippines Los Baños, College, Los Baños, Laguna, The Philippines
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13
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Adsorption of neutral and protonated Lewis bases on
$$\hbox {Na}_{8}$$
Na
8
-nanocluster: basicity enhancement of the Lewis bases. J CHEM SCI 2018. [DOI: 10.1007/s12039-018-1503-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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14
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Thermodynamic study of nanoclusters of lead (Pb n , n = 1–6): adsorption of small molecules on the Pb n clusters. RESEARCH ON CHEMICAL INTERMEDIATES 2018. [DOI: 10.1007/s11164-017-3101-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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15
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Quantum chemical description of formaldehyde (HCHO), acetaldehyde (CH3CHO) and propanal (CH3CH2CHO) pollutants adsorption behaviors onto the bowl-shaped B36 nanosheet. ADSORPTION 2017. [DOI: 10.1007/s10450-017-9913-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
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16
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Borophene: A novel boron sheet with a hexagonal vacancy offering high sensitivity for hydrogen cyanide detection. COMPUT THEOR CHEM 2017. [DOI: 10.1016/j.comptc.2017.06.018] [Citation(s) in RCA: 37] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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17
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Shakerzadeh E. Quantum chemical assessment of the adsorption behavior of fluorouracil as an anticancer drug on the B 36 nanosheet. J Mol Liq 2017. [DOI: 10.1016/j.molliq.2017.05.128] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
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18
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19
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Rostami Z, Soleymanabadi H. N-H bond cleavage of ammonia on graphene-like B36 borophene: DFT studies. J Mol Model 2016; 22:70. [PMID: 26969676 DOI: 10.1007/s00894-016-2954-8] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2016] [Accepted: 02/29/2016] [Indexed: 10/22/2022]
Abstract
Ammonia N-H bond cleavage at metal-free substrates has attracted great attention because of its industrial importance. Here, we investigate the dissociative adsorption of ammonia onto the surface of a B36 borophene sheet by means of density functional theory calculations. We show that the N-H bond may be broken at the edges of B36 even at room temperature, regarding the small energy barrier of 14.1-19.3 kcal mol(-1) at different levels of theory, and more negative Gibbs free energy change. Unlike basis set size, the kind of exchange correlation functional significantly affects the electronic properties of the studied systems. Also, by increasing the percentage of Hartree Fock (HF) exchange of density functionals, the activation and adsorption energies are lowered. A linear relationship between the highest occupied molecular orbital or lowest unoccupied molecular orbital of B36 borophene and the %HF exchange of functionals is predicted. Our work reveals that pure whole boron nanosheets may be promising metal-free materials in N-H bond cleavage, which would raise the potential application of these sheets.
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Affiliation(s)
- Zahra Rostami
- Department of Chemistry, Payame Noor University (PNU), PO Box, 19395-3697, Tehran, Iran.
| | - Hamed Soleymanabadi
- Young Researchers and Elite Club, Shahre-Rey Branch, Islamic Azad University, Tehran, Iran
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