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Balda RS, Cogo C, Falduti O, Bongiorno FM, Brignoli D, Sandobal TJ, Althabegoiti MJ, Lodeiro AR. Ribulose 1,5-Bisphosphate Carboxylase/Oxygenase Is Required in Bradyrhizobium diazoefficiens for Efficient Soybean Root Colonization and Competition for Nodulation. PLANTS (BASEL, SWITZERLAND) 2024; 13:2362. [PMID: 39273846 PMCID: PMC11397080 DOI: 10.3390/plants13172362] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2024] [Revised: 07/30/2024] [Accepted: 08/22/2024] [Indexed: 09/15/2024]
Abstract
The Hyphomicrobiales (Rhizobiales) order contains soil bacteria with an irregular distribution of the Calvin-Benson-Bassham cycle (CBB). Key enzymes in the CBB cycle are ribulose 1,5-bisphosphate carboxylase/oxygenase (RuBisCO), whose large and small subunits are encoded in cbbL and cbbS, and phosphoribulokinase (PRK), encoded by cbbP. These genes are often found in cbb operons, regulated by the LysR-type regulator CbbR. In Bradyrhizobium, pertaining to this order and bearing photosynthetic and non-photosynthetic species, the number of cbbL and cbbS copies varies, for example: zero in B. manausense, one in B. diazoefficiens, two in B. japonicum, and three in Bradyrhizobium sp. BTAi. Few studies addressed the role of CBB in Bradyrhizobium spp. symbiosis with leguminous plants. To investigate the horizontal transfer of the cbb operon among Hyphomicrobiales, we compared phylogenetic trees for concatenated cbbL-cbbP-cbbR and housekeeping genes (atpD-gyrB-recA-rpoB-rpoD). The distribution was consistent, indicating no horizontal transfer of the cbb operon in Hyphomicrobiales. We constructed a ΔcbbLS mutant in B. diazoefficiens, which lost most of the coding sequence of cbbL and has a frameshift creating a stop codon at the N-terminus of cbbS. This mutant nodulated normally but had reduced competitiveness for nodulation and long-term adhesion to soybean (Glycine max (L.) Merr.) roots, indicating a CBB requirement for colonizing soybean rhizosphere.
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Affiliation(s)
- Rocío S Balda
- Instituto de Biotecnología y Biología Molecular (IBBM), Facultad de Ciencias Exactas, Universidad Nacional de La Plata (UNLP), Centro Científico Tecnológico (CCT)-La Plata, Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), La Plata 1900, Argentina
| | - Carolina Cogo
- Instituto de Biotecnología y Biología Molecular (IBBM), Facultad de Ciencias Exactas, Universidad Nacional de La Plata (UNLP), Centro Científico Tecnológico (CCT)-La Plata, Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), La Plata 1900, Argentina
- Departamento de Ciencias Básicas, Facultad de Ingeniería, UNLP, La Plata 1900, Argentina
| | - Ornella Falduti
- Instituto de Biotecnología y Biología Molecular (IBBM), Facultad de Ciencias Exactas, Universidad Nacional de La Plata (UNLP), Centro Científico Tecnológico (CCT)-La Plata, Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), La Plata 1900, Argentina
| | - Florencia M Bongiorno
- Cátedra de Genética, Facultad de Ciencias Agrarias y Forestales, UNLP, La Plata 1900, Argentina
| | - Damián Brignoli
- Instituto de Biotecnología y Biología Molecular (IBBM), Facultad de Ciencias Exactas, Universidad Nacional de La Plata (UNLP), Centro Científico Tecnológico (CCT)-La Plata, Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), La Plata 1900, Argentina
- Cátedra de Genética, Facultad de Ciencias Agrarias y Forestales, UNLP, La Plata 1900, Argentina
| | - Tamara J Sandobal
- Instituto de Biotecnología y Biología Molecular (IBBM), Facultad de Ciencias Exactas, Universidad Nacional de La Plata (UNLP), Centro Científico Tecnológico (CCT)-La Plata, Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), La Plata 1900, Argentina
- Cátedra de Genética, Facultad de Ciencias Agrarias y Forestales, UNLP, La Plata 1900, Argentina
| | - María Julia Althabegoiti
- Instituto de Biotecnología y Biología Molecular (IBBM), Facultad de Ciencias Exactas, Universidad Nacional de La Plata (UNLP), Centro Científico Tecnológico (CCT)-La Plata, Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), La Plata 1900, Argentina
| | - Aníbal R Lodeiro
- Instituto de Biotecnología y Biología Molecular (IBBM), Facultad de Ciencias Exactas, Universidad Nacional de La Plata (UNLP), Centro Científico Tecnológico (CCT)-La Plata, Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), La Plata 1900, Argentina
- Cátedra de Genética, Facultad de Ciencias Agrarias y Forestales, UNLP, La Plata 1900, Argentina
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Karavidas I, Ntatsi G, Ntanasi T, Tampakaki A, Giannopoulou A, Pantazopoulou D, Sabatino L, Iannetta PPM, Savvas D. Hydroponic Common-Bean Performance under Reduced N-Supply Level and Rhizobia Application. PLANTS (BASEL, SWITZERLAND) 2023; 12:646. [PMID: 36771728 PMCID: PMC9920343 DOI: 10.3390/plants12030646] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/20/2022] [Revised: 01/26/2023] [Accepted: 01/27/2023] [Indexed: 06/18/2023]
Abstract
This study aims to explore the possibility of a reduced application of inorganic nitrogen (N) fertiliser on the yield, yield qualities, and biological nitrogen fixation (BNF) of the hydroponic common bean (Phaseolus vulgaris L.), without compromising plant performance, by utilizing the inherent ability of this plant to symbiotically fix N2. Until the flowering stage, plants were supplied with a nutrient solution containing N-concentrations of either a, 100%, conventional standard-practice, 13.8 mM; b, 75% of the standard, 10.35 mM; or c, 50% of the standard, 6.9 mM. During the subsequent reproductive stage, inorganic-N treatments b and c were decreased to 25% of the standard, and the standard (100% level) N-application was not altered. The three different inorganic-N supply treatments were combined with two different rhizobia strains, and a control (no-inoculation) treatment, in a two-factorial experiment. The rhizobia strains applied were either the indigenous strain Rhizobium sophoriradicis PVTN21 or the commercially supplied Rhizobium tropici CIAT 899. Results showed that the 50-25% mineral-N application regime led to significant increases in nodulation, BNF, and fresh-pod yield, compared to the other treatment, with a reduced inorganic-N supply. On the other hand, the 75-25% mineral-N regime applied during the vegetative stage restricted nodulation and BNF, thus incurring significant yield losses. Both rhizobia strains stimulated nodulation and BNF. However, the BNF capacity they facilitated was suppressed as the inorganic-N input increased. In addition, strain PVTN21 was superior to CIAT 899-as 50-25% N-treated plants inoculated with the former showed a yield loss of 11%, compared to the 100%-N-treated plants. In conclusion, N-use efficiency optimises BNF, reduces mineral-N-input dependency, and therefore may reduce any consequential negative environmental consequences of mineral-N over-application.
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Affiliation(s)
- Ioannis Karavidas
- Laboratory of Vegetable Production, Department of Crop Science, Agricultural University of Athens, Iera Odos 75, 11855 Athens, Greece
| | - Georgia Ntatsi
- Laboratory of Vegetable Production, Department of Crop Science, Agricultural University of Athens, Iera Odos 75, 11855 Athens, Greece
| | - Theodora Ntanasi
- Laboratory of Vegetable Production, Department of Crop Science, Agricultural University of Athens, Iera Odos 75, 11855 Athens, Greece
| | - Anastasia Tampakaki
- Department of Agriculture, Hellenic Mediterranean University, Estavromenos, 71410 Heraklion, Greece
| | - Ariadni Giannopoulou
- Laboratory of Vegetable Production, Department of Crop Science, Agricultural University of Athens, Iera Odos 75, 11855 Athens, Greece
| | - Dimitra Pantazopoulou
- Laboratory of Vegetable Production, Department of Crop Science, Agricultural University of Athens, Iera Odos 75, 11855 Athens, Greece
| | - Leo Sabatino
- Department of Agricultural, Food and Forest Sciences, University of Palermo, 90128 Palermo, Italy
| | | | - Dimitrios Savvas
- Laboratory of Vegetable Production, Department of Crop Science, Agricultural University of Athens, Iera Odos 75, 11855 Athens, Greece
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Wu ZY, Meng XF, Jiao YS, Guo BL, Sui XH, Ma SJ, Chen WF, Singh RP. Bradyrhizobium arachidis mediated enhancement of (oxy)matrine content in the medicinal legume Sophora flavescens. Lett Appl Microbiol 2021; 72:570-577. [PMID: 33474743 DOI: 10.1111/lam.13453] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2020] [Revised: 01/17/2021] [Accepted: 01/17/2021] [Indexed: 12/30/2022]
Abstract
Effect of rhizobial inoculation and nitrate application on the content of bioactive compounds in legume plants is an interesting aspect for interactions among microbes, plants and chemical fertilizers, as well as for cultivated practice of legumes. In this study, nitrate (0, 5 and 20 mmol l-1 ) and Bradyrhizobium arachidis strain CCBAU 051107T were applied, individually or in combination, to the root rhizosphere of the medicinal legume Sophora flavescens Aiton (SFA). Then the plant growth, nodulation and active ingredients including (oxy)matrine of SFA were determined and compared. Rhizobial inoculation alone significantly increased the numbers and fresh weight of root nodules. Nodulation was significantly inhibited due to nitrate (5 and 20 mmol l-1 ). Only oxymatrine was detected in the control plants without rhizobial inoculation and nitrate supplement, while both oxymatrine and matrine were synthesized in plants treated with inoculation of B. arachidis or supplied with nitrate. The content of oxymatrine was the highest in plants inoculated solely with rhizobia and was not significantly altered by additional application of nitrate. Combinations of B. arachidis inoculation and different concentrations of nitrate did not significantly change the concentrations of (oxy)matrine in the plant. In conclusion, sole rhizobial inoculation was the best approach to increase the contents of key active ingredients oxymatrine and matrine in the medicinal legume SFA.
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Affiliation(s)
- Z Y Wu
- State Key Laboratory of Agrobiotechnology, Beijing, China.,College of Biological Sciences and Rhizobium Research Center, China Agricultural University, Beijing, China
| | - X F Meng
- State Key Laboratory of Agrobiotechnology, Beijing, China.,College of Biological Sciences and Rhizobium Research Center, China Agricultural University, Beijing, China
| | - Y S Jiao
- State Key Laboratory of Agrobiotechnology, Beijing, China.,College of Biological Sciences and Rhizobium Research Center, China Agricultural University, Beijing, China
| | - B L Guo
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China
| | - X H Sui
- State Key Laboratory of Agrobiotechnology, Beijing, China.,College of Biological Sciences and Rhizobium Research Center, China Agricultural University, Beijing, China
| | - S J Ma
- College of Food Science and Pharmacy, Xinjiang Agricultural University, Urumqi, China
| | - W F Chen
- State Key Laboratory of Agrobiotechnology, Beijing, China.,College of Biological Sciences and Rhizobium Research Center, China Agricultural University, Beijing, China
| | - R P Singh
- Department of Research and Development, Biotechnology, Uttaranchal University, Dehradun, Uttarakhand, India
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