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Shi Y, Jin X, Ackah M, Amoako FK, Li J, Tsigbey VE, Li H, Cui Z, Sun L, Zhao C, Zhao W. Comparative Physio-Biochemical and Transcriptome Analyses Reveal Contrasting Responses to Magnesium Imbalances in Leaves of Mulberry ( Morus alba L.) Plants. Antioxidants (Basel) 2024; 13:516. [PMID: 38790621 PMCID: PMC11117640 DOI: 10.3390/antiox13050516] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2024] [Revised: 04/17/2024] [Accepted: 04/23/2024] [Indexed: 05/26/2024] Open
Abstract
Magnesium (Mg) deficiency is a major factor limiting the growth and development of plants. Mulberry (Morus alba L.) is an important fruit tree crop that requires Mg for optimal growth and yield, especially in acid soils. However, the molecular mechanism of Mg stress tolerance in mulberry plants remains unknown. In this study, we used next-generation sequencing technology and biochemical analysis to profile the transcriptome and physiological changes of mulberry leaves under different Mg treatments (deficiency: 0 mM, low: 1 mM, moderate low: 2 mM, sufficiency: 3 mM, toxicity: 6 mM, higher toxicity: 9 mM) as T1, T2, T3, CK, T4, T5 treatments, respectively, for 20 days. The results showed that Mg imbalance altered the antioxidant enzymatic activities, such as catalase (CAT), peroxidase (POD), and superoxide dismutase (SOD), and non-enzymatic, including soluble protein, soluble sugar, malondialdehyde (MDA), and proline (PRO), contents of the plant. The Mg imbalances disrupted the ultrastructures of the vital components of chloroplast and mitochondria relative to the control. The transcriptome data reveal that 11,030 genes were differentially expressed (DEGs). Genes related to the photosynthetic processes (CAB40, CAB7, CAB6A, CAB-151, CAP10A) and chlorophyll degradation (PAO, CHLASE1, SGR) were altered. Antioxidant genes such as PER42, PER21, and PER47 were downregulated, but DFR was upregulated. The carbohydrate metabolism pathway was significantly altered, while those involved in energy metabolism processes were perturbed under high Mg treatment compared with control. We also identified several candidate genes associated with magnesium homeostasis via RT-qPCR validation analysis, which provided valuable information for further functional characterization studies such as promoter activity assay or gene overexpression experiments using transient expression systems.
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Affiliation(s)
- Yisu Shi
- Jiangsu Key Laboratory of Sericulture Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China; (Y.S.); (X.J.); (J.L.); (V.E.T.); (Z.C.); (L.S.); (C.Z.)
- Key Laboratory of Silkworm and Mulberry Genetic Improvement, Ministry of Agriculture and Rural Affairs, The Sericultural Research Institute, Chinese Academy of Agricultural Sciences, Zhenjiang 212100, China
| | - Xin Jin
- Jiangsu Key Laboratory of Sericulture Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China; (Y.S.); (X.J.); (J.L.); (V.E.T.); (Z.C.); (L.S.); (C.Z.)
- Key Laboratory of Silkworm and Mulberry Genetic Improvement, Ministry of Agriculture and Rural Affairs, The Sericultural Research Institute, Chinese Academy of Agricultural Sciences, Zhenjiang 212100, China
| | - Michael Ackah
- Jiangsu Key Laboratory of Sericulture Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China; (Y.S.); (X.J.); (J.L.); (V.E.T.); (Z.C.); (L.S.); (C.Z.)
- Key Laboratory of Silkworm and Mulberry Genetic Improvement, Ministry of Agriculture and Rural Affairs, The Sericultural Research Institute, Chinese Academy of Agricultural Sciences, Zhenjiang 212100, China
| | - Frank Kwarteng Amoako
- Institute of Plant Nutrition and Soil Science, Kiel University, Hermann-Rodewald-Straße 2, 24118 Kiel, Germany;
| | - Jianbin Li
- Jiangsu Key Laboratory of Sericulture Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China; (Y.S.); (X.J.); (J.L.); (V.E.T.); (Z.C.); (L.S.); (C.Z.)
- Key Laboratory of Silkworm and Mulberry Genetic Improvement, Ministry of Agriculture and Rural Affairs, The Sericultural Research Institute, Chinese Academy of Agricultural Sciences, Zhenjiang 212100, China
| | - Victor Edem Tsigbey
- Jiangsu Key Laboratory of Sericulture Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China; (Y.S.); (X.J.); (J.L.); (V.E.T.); (Z.C.); (L.S.); (C.Z.)
- Key Laboratory of Silkworm and Mulberry Genetic Improvement, Ministry of Agriculture and Rural Affairs, The Sericultural Research Institute, Chinese Academy of Agricultural Sciences, Zhenjiang 212100, China
| | - Haonan Li
- Jiangsu Key Laboratory of Sericulture Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China; (Y.S.); (X.J.); (J.L.); (V.E.T.); (Z.C.); (L.S.); (C.Z.)
- Key Laboratory of Silkworm and Mulberry Genetic Improvement, Ministry of Agriculture and Rural Affairs, The Sericultural Research Institute, Chinese Academy of Agricultural Sciences, Zhenjiang 212100, China
| | - Zipei Cui
- Jiangsu Key Laboratory of Sericulture Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China; (Y.S.); (X.J.); (J.L.); (V.E.T.); (Z.C.); (L.S.); (C.Z.)
- Key Laboratory of Silkworm and Mulberry Genetic Improvement, Ministry of Agriculture and Rural Affairs, The Sericultural Research Institute, Chinese Academy of Agricultural Sciences, Zhenjiang 212100, China
| | - Longwei Sun
- Jiangsu Key Laboratory of Sericulture Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China; (Y.S.); (X.J.); (J.L.); (V.E.T.); (Z.C.); (L.S.); (C.Z.)
- Key Laboratory of Silkworm and Mulberry Genetic Improvement, Ministry of Agriculture and Rural Affairs, The Sericultural Research Institute, Chinese Academy of Agricultural Sciences, Zhenjiang 212100, China
| | - Chengfeng Zhao
- Jiangsu Key Laboratory of Sericulture Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China; (Y.S.); (X.J.); (J.L.); (V.E.T.); (Z.C.); (L.S.); (C.Z.)
- Key Laboratory of Silkworm and Mulberry Genetic Improvement, Ministry of Agriculture and Rural Affairs, The Sericultural Research Institute, Chinese Academy of Agricultural Sciences, Zhenjiang 212100, China
| | - Weiguo Zhao
- Jiangsu Key Laboratory of Sericulture Biology and Biotechnology, School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang 212100, China; (Y.S.); (X.J.); (J.L.); (V.E.T.); (Z.C.); (L.S.); (C.Z.)
- Key Laboratory of Silkworm and Mulberry Genetic Improvement, Ministry of Agriculture and Rural Affairs, The Sericultural Research Institute, Chinese Academy of Agricultural Sciences, Zhenjiang 212100, China
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Chakraborty P, Biswas A, Dey S, Bhattacharjee T, Chakrabarty S. Cytochrome P450 Gene Families: Role in Plant Secondary Metabolites Production and Plant Defense. J Xenobiot 2023; 13:402-423. [PMID: 37606423 PMCID: PMC10443375 DOI: 10.3390/jox13030026] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2023] [Revised: 07/07/2023] [Accepted: 07/24/2023] [Indexed: 08/23/2023] Open
Abstract
Cytochrome P450s (CYPs) are the most prominent family of enzymes involved in NADPH- and O2-dependent hydroxylation processes throughout all spheres of life. CYPs are crucial for the detoxification of xenobiotics in plants, insects, and other organisms. In addition to performing this function, CYPs serve as flexible catalysts and are essential for producing secondary metabolites, antioxidants, and phytohormones in higher plants. Numerous biotic and abiotic stresses frequently affect the growth and development of plants. They cause a dramatic decrease in crop yield and a deterioration in crop quality. Plants protect themselves against these stresses through different mechanisms, which are accomplished by the active participation of CYPs in several biosynthetic and detoxifying pathways. There are immense potentialities for using CYPs as a candidate for developing agricultural crop species resistant to biotic and abiotic stressors. This review provides an overview of the plant CYP families and their functions to plant secondary metabolite production and defense against different biotic and abiotic stresses.
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Affiliation(s)
- Panchali Chakraborty
- Department of Genetics, Development and Cell Biology, Iowa State University, Ames, IA 50011, USA;
| | - Ashok Biswas
- Annual Bast Fiber Breeding Laboratory, Institute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha 410205, China
- Department of Horticulture, Sylhet Agricultural University, Sylhet 3100, Bangladesh
| | - Susmita Dey
- Annual Bast Fiber Breeding Laboratory, Institute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha 410205, China
- Department of Plant Pathology and Seed Science, Sylhet Agricultural University, Sylhet 3100, Bangladesh
| | - Tuli Bhattacharjee
- Department of Chemistry, Jahangirnagar University, Dhaka 1342, Bangladesh
| | - Swapan Chakrabarty
- College of Forest Resources and Environmental Sciences, Michigan Technological University, Houghton, MI 49931, USA
- College of Computing, Department of Computer Science, Michigan Technological University, Houghton, MI 49931, USA
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Das A, Begum K, Akhtar S, Ahmed R, Tamuli P, Kulkarni R, Banu S. Genome-wide investigation of Cytochrome P450 superfamily of Aquilaria agallocha: Association with terpenoids and phenylpropanoids biosynthesis. Int J Biol Macromol 2023; 234:123758. [PMID: 36812976 DOI: 10.1016/j.ijbiomac.2023.123758] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2022] [Revised: 01/12/2023] [Accepted: 02/11/2023] [Indexed: 02/22/2023]
Abstract
Agarwood is a dark resinous wood, produced when Aquilaria tree responds to wounding and microbial infection resulting in the accumulation of fragrant metabolites. Sesquiterpenoids and 2-(2-phenylethyl) chromones are the major phytochemicals in agarwood and Cytochrome P450s (CYPs) are one of the important enzymes in the biosynthesis of these fragrant chemicals. Thus, understanding the repertoire of CYP superfamily in Aquilaria can not only give insights into the fundamentals of agarwood formation, but can also provide a tool for the overproduction of the aroma chemicals. Therefore, current study was designed to investigate CYPs of an agarwood producing plant, Aquilaria agallocha. We identified 136 CYP genes from A. agallocha genome (AaCYPs) and classified them into 8 clans and 38 families. The promoter regions had stress and hormone-related cis-regulatory elements which indicate their participation in the stress response. Duplication and synteny analysis revealed segmental and tandem duplicated and evolutionary related CYP members in other plants. Potential members involved in the biosynthesis of sesquiterpenoids and phenylpropanoids were identified and found to be upregulated in methyl jasmonate-induced callus and infected Aquilaria trees by real-time quantitative PCR analyses. This study highlights the possible involvement of AaCYPs in agarwood resin development and their complex regulation during stress exposure.
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Affiliation(s)
- Ankur Das
- Department of Bioengineering and Technology, Gauhati University, Guwahati, Assam 781014, India
| | - Khaleda Begum
- Department of Bioengineering and Technology, Gauhati University, Guwahati, Assam 781014, India
| | - Suraiya Akhtar
- Department of Bioengineering and Technology, Gauhati University, Guwahati, Assam 781014, India
| | - Raja Ahmed
- Department of Bioengineering and Technology, Gauhati University, Guwahati, Assam 781014, India
| | | | - Ram Kulkarni
- Symbiosis School of Biological Sciences, Symbiosis International (Deemed University), Lavale, Pune 411042, India
| | - Sofia Banu
- Department of Bioengineering and Technology, Gauhati University, Guwahati, Assam 781014, India.
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Lalarukh I, Wang X, Amjad SF, Hussain R, Ahmar S, Mora-Poblete F, Abdel-Hafez SH, Fawzy MA, Abbas MH, Abdelhafez AA, Datta R. Chemical role of α-tocopherol in salt stress mitigation by improvement in morpho-physiological attributes of sunflower (Helianthus annuus L.). Saudi J Biol Sci 2022; 29:1386-1393. [PMID: 35280589 PMCID: PMC8913399 DOI: 10.1016/j.sjbs.2021.11.027] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2021] [Revised: 10/31/2021] [Accepted: 11/17/2021] [Indexed: 12/20/2022] Open
Abstract
Elevated concentrations of salts in soil and water represent abiotic stresses. It considerably restricts plant productivity. However, the use of alpha-tocopherol (α-toc) as foliar can overcome this problem. It can improve crop productivity grown under salinity stress. Limited literature is documented regarding its optimum foliar application on sunflower. That’s why the need for the time is to optimize α-toc foliar application rates for sunflower cultivated in salt-affected soil. A pot experiment was performed to select a better α-toc foliar application for mitigation of salt stress in different sunflower cultivars FH (572 and 621). There were 2 levels of salts, i.e., control (no salt stress) and sodium chloride (120 mM) and four α-toc foliar application (0, 100, 200, and 300 mg L−1). Results showed that foliar application of 100 mg/L- α-toc triggered the remarkable increase in fresh shoot weight, fresh root weight, shoot, and root lengths under salinity stress in FH-572 and FH-621 over 0 mg/L- α-toc. Foliar application of 200 mg/L- α-toc was most effective for improvement in chlorophyll a, chlorophyll b, total chlorophyll and carotenoids compared to 0 mg/L- α-toc. Furthermore, an increase in A was noted in FH-572 (17%) and FH-621 (22%) with α-toc (300 mg L−1) application under saline condition. In conclusion, the 100 and 200 mg/L- α-toc are the best application rates for the improvement in sunflower FH-572 and FH-621 growth, chlorophyll contents and gas exchange attributes. Further investigations are needed to select a better foliar application rate between 100 and 200 mg/L- α-toc at the field level under the different agro-climatic zone and soil types.
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Affiliation(s)
- Irfana Lalarukh
- Department of Botany, Government College Women University, Faisalabad 38000, Pakistan
| | - Xiukang Wang
- College of Life Sciences, Yan’an University, Yan’an, Shaanxi 716000, PR China
- Corresponding authors.
| | - Syeda Fasiha Amjad
- Department of Botany University of Agriculture Faisalabad, 38000, Pakistan
- Corresponding authors.
| | - Rashid Hussain
- Department of Horticultural Sciences, Faculty of Agriculture and Environment, The Islamia University of Bahawalpur, 63100 Punjab, Pakistan
| | - Sunny Ahmar
- Institute of Biological Sciences, University of Talca, 1 Poniente 1141, Talca 3460000, Chile
- Department of Plant Breeding and Genetics, PMAS- Arid Agriculture University, Rawalpindi 46000, Pakistan
| | - Freddy Mora-Poblete
- Institute of Biological Sciences, Campus Talca, Universidad deTalca, Talca 3465548, Chile
| | - Shams H. Abdel-Hafez
- Department of Chemistry, College of Science, Taif University, P.O.Box 11099, Taif 21944. Saudi Arabia
| | - Mustafa A. Fawzy
- Biology Department, College of Science, Taif University, P.O.Box 11099, Taif 21944, Saudi Arabia
| | - Mohamed H.H. Abbas
- Benha University, Faculty of Agriculture, Soils and Water Department, Egypt
| | - Ahmed A. Abdelhafez
- New Valley University, Faculty of Agriculture, Soils and Water Department, Egypt
- National Committee of Soil Science, Academy of Scientific Research and Technology, Egypt
- Corresponding authors.
| | - Rahul Datta
- Department of Geology and Pedology, Faculty of Forestry and Wood Technology, Mendel University in Brno, Zemedelska1, 61300 Brno, Czech Republic
- Corresponding authors.
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Genome-wide association mapping reveals key genomic regions for physiological and yield-related traits under salinity stress in wheat (Triticum aestivum L.). Genomics 2021; 113:3198-3215. [PMID: 34293475 DOI: 10.1016/j.ygeno.2021.07.014] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2020] [Revised: 06/27/2021] [Accepted: 07/13/2021] [Indexed: 11/21/2022]
Abstract
A genome-wide association study (GWAS) was conducted using six different multi-locus GWAS models and 35K SNP array to demarcate genomic regions underlying reproductive stage salinity tolerance. Marker-trait association analysis was performed for salt tolerance indices (STI) of 11 morpho-physiological traits, and the actual concentrations of Na+ and K+, and the Na+/K+ ratio in flag leaf. A total of 293 significantly associated quantitative trait nucleotides (QTNs) for 14 morpho-physiological traits were identified. Of these 293 QTNs, 12 major QTNs with R2 ≥ 10.0% were detected in three or more GWAS models. Novel major QTNs were identified for plant height, number of effective tillers, biomass, grain yield, thousand grain weight, Na+ and K+ content, and the Na+/K+ ratio in flag leaf. Moreover, 48 candidate genes were identified from the associated genomic regions. The QTNs identified in this study could potentially be targeted for improving salinity tolerance in wheat.
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Liu ZY, Li XP, Zhang TQ, Wang YY, Wang C, Gao CQ. Overexpression of ThMYB8 mediates salt stress tolerance by directly activating stress-responsive gene expression. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2021; 302:110668. [PMID: 33288032 DOI: 10.1016/j.plantsci.2020.110668] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/17/2020] [Revised: 08/05/2020] [Accepted: 09/05/2020] [Indexed: 05/02/2023]
Abstract
MYB transcription factors are important in abiotic stress responses; however, the detailed mechanisms are unclear. Tamarix hispida contains multiple MYB genes. The present study characterized T. hispida MYB8 (ThMYB8) during salt stress using transgenic T. hispida and Arabidopsis assays. ThMYB8 overexpression and ThMYB8 RNAi analysis demonstrated that ThMYB8 enhanced the salt stress tolerance. Transgenic Arabidopsis ectopic expression of ThMYB8 significantly increased root growth, fresh weight, and seed germination rate compared with that of the wild-type under salt stress. Physiological parameters analysis in T. hispida and Arabidopsis showed that ThMYB8 overexpressing plants had the lowest levels of O2, H2O2, cell death, malondialdehyde, and electrolyte leakage. Overexpression of ThMYB8 regulated Na+ and K+ concentrations in plant tissues while maintaining K+/Na+ homeostasis. Analysis using qRT-PCR and ChIP-PCR identified possible downstream ThMYB8-regulated genes. ThMYB8 regulated the expression of ThCYP450-2 (cytochrome p450-2), Thltk (leucine-rich repeat transmembrane protein kinase), and ThTIP (aquaporin TIP) by binding to the MBSI motif ('CAACTG') in their promoters. The results indicated that ThMYB8 enhanced salt stress tolerance in T. hispida by regulating gene expression related to the activation of stress-associated physiological changes, such as enhanced reactive oxygen species scavenging capability, maintaining K+/Na+ homeostasis, and decreasing the malondialdehyde content and lipid peroxidation cell membranes.
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Affiliation(s)
- Zhong-Yuan Liu
- State Key Laboratory of Tree Genetics and Breeding (Northeast Forestry University), Harbin 150040, China
| | - Xin-Ping Li
- State Key Laboratory of Tree Genetics and Breeding (Northeast Forestry University), Harbin 150040, China
| | - Teng-Qian Zhang
- State Key Laboratory of Tree Genetics and Breeding (Northeast Forestry University), Harbin 150040, China
| | - Yuan-Yuan Wang
- State Key Laboratory of Tree Genetics and Breeding (Northeast Forestry University), Harbin 150040, China
| | - Chao Wang
- State Key Laboratory of Tree Genetics and Breeding (Northeast Forestry University), Harbin 150040, China
| | - Cai-Qiu Gao
- State Key Laboratory of Tree Genetics and Breeding (Northeast Forestry University), Harbin 150040, China.
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Wu S, Wang Y, Zhang J, Wang Y, Yang Y, Chen X, Wang Y. How does Malus crabapple resist ozone? Transcriptomics and metabolomics analyses. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2020; 201:110832. [PMID: 32563158 DOI: 10.1016/j.ecoenv.2020.110832] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/09/2020] [Revised: 05/28/2020] [Accepted: 05/29/2020] [Indexed: 06/11/2023]
Abstract
Ozone (O3), an oxidizing toxic air pollutant, is ubiquitous in industrialized and developing countries. To understand the effects of O3 exposure on apple (Malus) and to explore its defense mechanisms, we exposed 'Hongjiu' crabapple to O3 and monitored its responses using physiological, transcriptomics, and metabolomics analyses. Exposure to 300 nL L-1 O3 for 3 h caused obvious damage to the leaves of Malus crabapple, affected chlorophyll and anthocyanin contents, and activated antioxidant enzymes. The gene encoding phospholipase A was highly responsive to O3 in Malus crabapple. McWRKY75 is a key transcription factor in the response to O3 stress, and its transcript levels were positively correlated with those of flavonoid-related structural genes (McC4H, McDFR, and McANR). The ethylene response factors McERF019 and McERF109-like were also up-regulated by O3. Exogenous methyl jasmonate (MeJA) decreased the damaging effects of O3 on crabapple and was most effective at 200 μmol L -1. Treatments with MeJA altered the metabolic pathways of crabapple under O3 stress. In particular, MeJA activated the flavonoid metabolic pathway in Malus, which improved its resistance to O3 stress.
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Affiliation(s)
- Shuqing Wu
- College of Forestry, Shandong Agricultural University, Tai-An, 271000, China; State Forestry and Grassland Administration Key Laboratory of Silviculture in Downstream Areas of the Yellow River, Tai-An, 271000, China
| | - Yao Wang
- College of Forestry, Shandong Agricultural University, Tai-An, 271000, China; State Forestry and Grassland Administration Key Laboratory of Silviculture in Downstream Areas of the Yellow River, Tai-An, 271000, China
| | - Junkang Zhang
- College of Forestry, Shandong Agricultural University, Tai-An, 271000, China; State Forestry and Grassland Administration Key Laboratory of Silviculture in Downstream Areas of the Yellow River, Tai-An, 271000, China
| | - Yicheng Wang
- Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, 271000, China
| | - Yuwei Yang
- College of Forestry, Shandong Agricultural University, Tai-An, 271000, China; State Forestry and Grassland Administration Key Laboratory of Silviculture in Downstream Areas of the Yellow River, Tai-An, 271000, China
| | - Xuesen Chen
- Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, 271000, China.
| | - Yanling Wang
- College of Forestry, Shandong Agricultural University, Tai-An, 271000, China; State Forestry and Grassland Administration Key Laboratory of Silviculture in Downstream Areas of the Yellow River, Tai-An, 271000, China.
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Xiong J, Liu L, Ma X, Li F, Tang C, Li Z, Lü B, Zhou T, Lian X, Chang Y, Tang M, Xie S, Lu X. Characterization of PtAOS1 Promoter and Three Novel Interacting Proteins Responding to Drought in Poncirus trifoliata. Int J Mol Sci 2020; 21:ijms21134705. [PMID: 32630273 PMCID: PMC7370134 DOI: 10.3390/ijms21134705] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2020] [Revised: 06/27/2020] [Accepted: 06/29/2020] [Indexed: 11/16/2022] Open
Abstract
Jasmonic acid (JA) plays a crucial role in various biological processes including development, signal transduction and stress response. Allene oxide synthase (AOS) catalyzing (13S)-hydroperoxyoctadecatrienoic acid (13-HPOT) to an unstable allene oxide is involved in the first step of JA biosynthesis. Here, we isolated the PtAOS1 gene and its promoter from trifoliate orange (Poncirus trifoliata). PtAOS1 contains a putative chloroplast targeting sequence in N-terminal and shows relative to pistachio (Pistacia vera) AOS. A number of stress-, light- and hormone-related cis-elements were found in the PtAOS1 promoter which may be responsible for the up-regulation of PtAOS1 under drought and JA treatments. Transient expression in tobacco (Nicotiana benthamiana) demonstrated that the P-532 (-532 to +1) fragment conferring drive activity was a core region in the PtAOS1 promoter. Using yeast one-hybrid, three novel proteins, PtDUF886, PtDUF1685 and PtRAP2.4, binding to P-532 were identified. The dual luciferase assay in tobacco illustrated that all three transcription factors could enhance PtAOS1 promoter activity. Genes PtDUF1685 and PtRAP2.4 shared an expression pattern which was induced significantly by drought stress. These findings should be available evidence for trifoliate orange responding to drought through JA modulation.
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Affiliation(s)
- Jiang Xiong
- Department of Horticulture, College of Horticulture, Hunan Agricultural University, Changsha 410128, China; (J.X.); (L.L.); (X.M.); (F.L.); (C.T.); (Z.L.); (B.L.); (T.Z.); (X.L.); (Y.C.); (M.T.); (S.X.)
- National Centre for Citrus Improvement, Changsha 410128, China
| | - Lian Liu
- Department of Horticulture, College of Horticulture, Hunan Agricultural University, Changsha 410128, China; (J.X.); (L.L.); (X.M.); (F.L.); (C.T.); (Z.L.); (B.L.); (T.Z.); (X.L.); (Y.C.); (M.T.); (S.X.)
- National Centre for Citrus Improvement, Changsha 410128, China
| | - Xiaochuan Ma
- Department of Horticulture, College of Horticulture, Hunan Agricultural University, Changsha 410128, China; (J.X.); (L.L.); (X.M.); (F.L.); (C.T.); (Z.L.); (B.L.); (T.Z.); (X.L.); (Y.C.); (M.T.); (S.X.)
- National Centre for Citrus Improvement, Changsha 410128, China
| | - Feifei Li
- Department of Horticulture, College of Horticulture, Hunan Agricultural University, Changsha 410128, China; (J.X.); (L.L.); (X.M.); (F.L.); (C.T.); (Z.L.); (B.L.); (T.Z.); (X.L.); (Y.C.); (M.T.); (S.X.)
- National Centre for Citrus Improvement, Changsha 410128, China
- Institute of Horticulture, Hunan Academy of Agricultural Science, Changsha 410125, China
| | - Chaolan Tang
- Department of Horticulture, College of Horticulture, Hunan Agricultural University, Changsha 410128, China; (J.X.); (L.L.); (X.M.); (F.L.); (C.T.); (Z.L.); (B.L.); (T.Z.); (X.L.); (Y.C.); (M.T.); (S.X.)
- National Centre for Citrus Improvement, Changsha 410128, China
| | - Zehang Li
- Department of Horticulture, College of Horticulture, Hunan Agricultural University, Changsha 410128, China; (J.X.); (L.L.); (X.M.); (F.L.); (C.T.); (Z.L.); (B.L.); (T.Z.); (X.L.); (Y.C.); (M.T.); (S.X.)
- National Centre for Citrus Improvement, Changsha 410128, China
| | - Biwen Lü
- Department of Horticulture, College of Horticulture, Hunan Agricultural University, Changsha 410128, China; (J.X.); (L.L.); (X.M.); (F.L.); (C.T.); (Z.L.); (B.L.); (T.Z.); (X.L.); (Y.C.); (M.T.); (S.X.)
- National Centre for Citrus Improvement, Changsha 410128, China
| | - Tie Zhou
- Department of Horticulture, College of Horticulture, Hunan Agricultural University, Changsha 410128, China; (J.X.); (L.L.); (X.M.); (F.L.); (C.T.); (Z.L.); (B.L.); (T.Z.); (X.L.); (Y.C.); (M.T.); (S.X.)
- National Centre for Citrus Improvement, Changsha 410128, China
| | - Xuefei Lian
- Department of Horticulture, College of Horticulture, Hunan Agricultural University, Changsha 410128, China; (J.X.); (L.L.); (X.M.); (F.L.); (C.T.); (Z.L.); (B.L.); (T.Z.); (X.L.); (Y.C.); (M.T.); (S.X.)
- National Centre for Citrus Improvement, Changsha 410128, China
| | - Yuanyuan Chang
- Department of Horticulture, College of Horticulture, Hunan Agricultural University, Changsha 410128, China; (J.X.); (L.L.); (X.M.); (F.L.); (C.T.); (Z.L.); (B.L.); (T.Z.); (X.L.); (Y.C.); (M.T.); (S.X.)
- National Centre for Citrus Improvement, Changsha 410128, China
| | - Mengjing Tang
- Department of Horticulture, College of Horticulture, Hunan Agricultural University, Changsha 410128, China; (J.X.); (L.L.); (X.M.); (F.L.); (C.T.); (Z.L.); (B.L.); (T.Z.); (X.L.); (Y.C.); (M.T.); (S.X.)
- National Centre for Citrus Improvement, Changsha 410128, China
| | - Shenxi Xie
- Department of Horticulture, College of Horticulture, Hunan Agricultural University, Changsha 410128, China; (J.X.); (L.L.); (X.M.); (F.L.); (C.T.); (Z.L.); (B.L.); (T.Z.); (X.L.); (Y.C.); (M.T.); (S.X.)
- National Centre for Citrus Improvement, Changsha 410128, China
| | - Xiaopeng Lu
- Department of Horticulture, College of Horticulture, Hunan Agricultural University, Changsha 410128, China; (J.X.); (L.L.); (X.M.); (F.L.); (C.T.); (Z.L.); (B.L.); (T.Z.); (X.L.); (Y.C.); (M.T.); (S.X.)
- National Centre for Citrus Improvement, Changsha 410128, China
- Correspondence: ; Tel./Fax: +86-0731-84618171
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Pandian BA, Sathishraj R, Djanaguiraman M, Prasad PV, Jugulam M. Role of Cytochrome P450 Enzymes in Plant Stress Response. Antioxidants (Basel) 2020; 9:antiox9050454. [PMID: 32466087 PMCID: PMC7278705 DOI: 10.3390/antiox9050454] [Citation(s) in RCA: 164] [Impact Index Per Article: 41.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2020] [Revised: 05/21/2020] [Accepted: 05/21/2020] [Indexed: 12/20/2022] Open
Abstract
Cytochrome P450s (CYPs) are the largest enzyme family involved in NADPH- and/or O2-dependent hydroxylation reactions across all the domains of life. In plants and animals, CYPs play a central role in the detoxification of xenobiotics. In addition to this function, CYPs act as versatile catalysts and play a crucial role in the biosynthesis of secondary metabolites, antioxidants, and phytohormones in higher plants. The molecular and biochemical processes catalyzed by CYPs have been well characterized, however, the relationship between the biochemical process catalyzed by CYPs and its effect on several plant functions was not well established. The advent of next-generation sequencing opened new avenues to unravel the involvement of CYPs in several plant functions such as plant stress response. The expression of several CYP genes are regulated in response to environmental stresses, and they also play a prominent role in the crosstalk between abiotic and biotic stress responses. CYPs have an enormous potential to be used as a candidate for engineering crop species resilient to biotic and abiotic stresses. The objective of this review is to summarize the latest research on the role of CYPs in plant stress response.
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Affiliation(s)
- Balaji Aravindhan Pandian
- Department of Agronomy, Kansas State University, Manhattan, KS 66506, USA; (B.A.P.); (R.S.); (M.D.); (P.V.V.P.)
| | - Rajendran Sathishraj
- Department of Agronomy, Kansas State University, Manhattan, KS 66506, USA; (B.A.P.); (R.S.); (M.D.); (P.V.V.P.)
| | - Maduraimuthu Djanaguiraman
- Department of Agronomy, Kansas State University, Manhattan, KS 66506, USA; (B.A.P.); (R.S.); (M.D.); (P.V.V.P.)
- Department of Crop Physiology, Tamil Nadu Agricultural University, Coimbatore, Tamil Nadu 641003, India
| | - P.V. Vara Prasad
- Department of Agronomy, Kansas State University, Manhattan, KS 66506, USA; (B.A.P.); (R.S.); (M.D.); (P.V.V.P.)
| | - Mithila Jugulam
- Department of Agronomy, Kansas State University, Manhattan, KS 66506, USA; (B.A.P.); (R.S.); (M.D.); (P.V.V.P.)
- Correspondence: ; Tel.: +1-785-532-2755
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10
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Zhang M, Hong LZ, Gu MF, Wu CD, Zhang G. Transcriptome analyses revealed molecular responses of Cynanchum auriculatum leaves to saline stress. Sci Rep 2020; 10:449. [PMID: 31949203 PMCID: PMC6965089 DOI: 10.1038/s41598-019-57219-8] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2019] [Accepted: 12/24/2019] [Indexed: 11/25/2022] Open
Abstract
Cynanchum auriculatum is a traditional herbal medicine in China and can grow in saline soils. However, little is known in relation to the underlying molecular mechanisms. In the present study, C. auriculatum seedlings were exposed to 3.75‰ and 7.5‰ salinity. Next, transcriptome profiles of leaves were compared. Transcriptome sequencing showed 35,593 and 58,046 differentially expressed genes (DEGs) in treatments with 3.75‰ and 7.5‰, compared with the control, respectively. Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses of these DEGs enriched various defense-related biological pathways, including ROS scavenging, ion transportation, lipid metabolism and plant hormone signaling. Further analyses suggested that C. auriculatum up-regulated Na+/H+ exchanger and V-type proton ATPase to avoid accumulation of Na+. The flavonoid and phenylpropanoids biosynthesis pathways were activated, which might increase antioxidant capacity in response to saline stress. The auxin and ethylene signaling pathways were upregulated in response to saline treatments, both of which are important plant hormones. Overall, these results raised new insights to further investigate molecular mechanisms underlying resistance of C. auriculatum to saline stress.
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Affiliation(s)
- Ming Zhang
- Xinyang Agricultural Experiment Station of Yancheng City, Jiangsu Province, 224045, P.R. China
| | - Li-Zhou Hong
- Xinyang Agricultural Experiment Station of Yancheng City, Jiangsu Province, 224045, P.R. China
| | - Min-Feng Gu
- Xinyang Agricultural Experiment Station of Yancheng City, Jiangsu Province, 224045, P.R. China
| | - Cheng-Dong Wu
- Xinyang Agricultural Experiment Station of Yancheng City, Jiangsu Province, 224045, P.R. China.
| | - Gen Zhang
- Shenzhen GenProMetab Biotechnology Company Limited., Shenzhen, Guangdong Province, 51800, P.R. China.
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11
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Transcriptome profiling of rubber tree (Hevea brasiliensis) discovers candidate regulators of the cold stress response. Genes Genomics 2018; 40:1181-1197. [DOI: 10.1007/s13258-018-0681-5] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2017] [Accepted: 02/28/2018] [Indexed: 01/26/2023]
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