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Hulleman T, Turkina V, O’Brien JW, Chojnacka A, Thomas KV, Samanipour S. Critical Assessment of the Chemical Space Covered by LC-HRMS Non-Targeted Analysis. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2023; 57:14101-14112. [PMID: 37704971 PMCID: PMC10537454 DOI: 10.1021/acs.est.3c03606] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/15/2023] [Revised: 08/29/2023] [Accepted: 08/30/2023] [Indexed: 09/15/2023]
Abstract
Non-targeted analysis (NTA) has emerged as a valuable approach for the comprehensive monitoring of chemicals of emerging concern (CECs) in the exposome. The NTA approach can theoretically identify compounds with diverse physicochemical properties and sources. Even though they are generic and have a wide scope, non-targeted analysis methods have been shown to have limitations in terms of their coverage of the chemical space, as the number of identified chemicals in each sample is very low (e.g., ≤5%). Investigating the chemical space that is covered by each NTA assay is crucial for understanding the limitations and challenges associated with the workflow, from the experimental methods to the data acquisition and data processing techniques. In this review, we examined recent NTA studies published between 2017 and 2023 that employed liquid chromatography-high-resolution mass spectrometry. The parameters used in each study were documented, and the reported chemicals at confidence levels 1 and 2 were retrieved. The chosen experimental setups and the quality of the reporting were critically evaluated and discussed. Our findings reveal that only around 2% of the estimated chemical space was covered by the NTA studies investigated for this review. Little to no trend was found between the experimental setup and the observed coverage due to the generic and wide scope of the NTA studies. The limited coverage of the chemical space by the reviewed NTA studies highlights the necessity for a more comprehensive approach in the experimental and data processing setups in order to enable the exploration of a broader range of chemical space, with the ultimate goal of protecting human and environmental health. Recommendations for further exploring a wider range of the chemical space are given.
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Affiliation(s)
- Tobias Hulleman
- Van
’t Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, 1090 GD Amsterdam, The Netherlands
| | - Viktoriia Turkina
- Van
’t Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, 1090 GD Amsterdam, The Netherlands
| | - Jake W. O’Brien
- Van
’t Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, 1090 GD Amsterdam, The Netherlands
- Queensland
Alliance for Environmental Health Sciences (QAEHS), The University of Queensland, 20 Cornwall Street, Woolloongabba, Queensland 4102, Australia
| | - Aleksandra Chojnacka
- Van
’t Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, 1090 GD Amsterdam, The Netherlands
| | - Kevin V. Thomas
- Queensland
Alliance for Environmental Health Sciences (QAEHS), The University of Queensland, 20 Cornwall Street, Woolloongabba, Queensland 4102, Australia
| | - Saer Samanipour
- Van
’t Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, 1090 GD Amsterdam, The Netherlands
- UvA
Data Science Center, University of Amsterdam, 1012 WP Amsterdam, The Netherlands
- Queensland
Alliance for Environmental Health Sciences (QAEHS), 20 Cornwall Street, Woolloongabba, Queensland 4102, Australia
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Oberleitner D, Schmid R, Schulz W, Bergmann A, Achten C. Feature-based molecular networking for identification of organic micropollutants including metabolites by non-target analysis applied to riverbank filtration. Anal Bioanal Chem 2021; 413:5291-5300. [PMID: 34286355 PMCID: PMC8405475 DOI: 10.1007/s00216-021-03500-7] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2021] [Revised: 06/16/2021] [Accepted: 06/22/2021] [Indexed: 01/25/2023]
Abstract
Due to growing concern about organic micropollutants and their transformation products (TP) in surface and drinking water, reliable identification of unknowns is required. Here, we demonstrate how non-target liquid chromatography (LC)-high-resolution tandem mass spectrometry (MS/MS) and the feature-based molecular networking (FBMN) workflow provide insight into water samples from four riverbank filtration sites with different redox conditions. First, FBMN prioritized and connected drinking water relevant and seasonally dependent compounds based on a modification-aware MS/MS cosine similarity. Within the resulting molecular networks, forty-three compounds were annotated. Here, carbamazepine, sartans, and their respective TP were investigated exemplarily. With chromatographic information and spectral similarity, four additional TP (dealkylated valsartan, dealkylated irbesartan, two oxygenated irbesartan isomers) and olmesartan were identified and partly verified with an authentic standard. In this study, sartans and TP were investigated and grouped regarding their removal behavior under different redox conditions and seasons for the first time. Antihypertensives were grouped into compounds being well removed during riverbank filtration, those primarily removed under anoxic conditions, and rather persistent compounds. Observed seasonal variations were mainly limited to varying river water concentrations. FBMN is a powerful tool for identifying previously unknown or unexpected compounds and their TP in water samples by non-target analysis.
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Affiliation(s)
- Daniela Oberleitner
- Institute of Geology and Palaeontology - Applied Geology, University of Münster, Corrensstraße 24, 48149, Münster, Germany
| | - Robin Schmid
- Institute of Inorganic and Analytical Chemistry, University of Münster, Corrensstraße 28/30, 48149, Münster, Germany
| | - Wolfgang Schulz
- Laboratory for Operation Control and Research, Zweckverb and Landeswasserversorgung, Am Spitzigen Berg 1, 89129, Langenau, Germany
| | - Axel Bergmann
- Rheinisch-Westfälische Wasserwerksgesellschaft mbH, Am Schloß Broich 1-3, 45479, Mülheim (Ruhr), Germany
| | - Christine Achten
- Institute of Geology and Palaeontology - Applied Geology, University of Münster, Corrensstraße 24, 48149, Münster, Germany.
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González-Gaya B, Lopez-Herguedas N, Bilbao D, Mijangos L, Iker AM, Etxebarria N, Irazola M, Prieto A, Olivares M, Zuloaga O. Suspect and non-target screening: the last frontier in environmental analysis. ANALYTICAL METHODS : ADVANCING METHODS AND APPLICATIONS 2021; 13:1876-1904. [PMID: 33913946 DOI: 10.1039/d1ay00111f] [Citation(s) in RCA: 39] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Suspect and non-target screening (SNTS) techniques are arising as new analytical strategies useful to disentangle the environmental occurrence of the thousands of exogenous chemicals present in our ecosystems. The unbiased discovery of the wide number of substances present over environmental analysis needs to find a consensus with powerful technical and computational requirements, as well as with the time-consuming unequivocal identification of discovered analytes. Within these boundaries, the potential applications of SNTS include the studies of environmental pollution in aquatic, atmospheric, solid and biological samples, the assessment of new compounds, transformation products and metabolites, contaminant prioritization, bioremediation or soil/water treatment evaluation, and retrospective data analysis, among many others. In this review, we evaluate the state of the art of SNTS techniques going over the normalized workflow from sampling and sample treatment to instrumental analysis, data processing and a brief review of the more recent applications of SNTS in environmental occurrence and exposure to xenobiotics. The main issues related to harmonization and knowledge gaps are critically evaluated and the challenges of their implementation are assessed in order to ensure a proper use of these promising techniques in the near future.
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Affiliation(s)
- B González-Gaya
- Department of Analytical Chemistry, University of the Basque Country (UPV/EHU), 48940 Leioa, Basque Country, Spain.
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Purschke K, Vosough M, Leonhardt J, Weber M, Schmidt TC. Evaluation of Nontarget Long-Term LC-HRMS Time Series Data Using Multivariate Statistical Approaches. Anal Chem 2020; 92:12273-12281. [PMID: 32812753 DOI: 10.1021/acs.analchem.0c01897] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
The use of liquid chromatography coupled with high-resolution mass spectrometry (LC-HRMS) has steadily increased in many application fields ranging from metabolomics to environmental science. HRMS data are frequently used for nontarget screening (NTS), i.e., the search for compounds that are not previously known and where no reference substances are available. However, the large quantity of data produced by NTS analytical workflows makes data interpretation and time-dependent monitoring of samples very sophisticated and necessitates exploiting chemometric data processing techniques. Consequently, in this study, a prioritization method to handle time series in nontarget data was established. As proof of concept, industrial wastewater was investigated. As routine industrial wastewater analyses monitor the occurrence of a limited number of targeted water contaminants, NTS provides the opportunity to detect also unknown trace organic compounds (TrOCs) that are not in the focus of routine target analysis. The developed prioritization method enables reducing raw data and including identification of prioritized unknown contaminants. To that end, a five-month time series for industrial wastewaters was utilized, analyzed by liquid chromatography-time-of-flight mass spectrometry (LC-qTOF-MS), and evaluated by NTS. Following peak detection, alignment, grouping, and blank subtraction, 3303 features were obtained of wastewater treatment plant (WWTP) influent samples. Subsequently, two complementary ways for exploratory time trend detection and feature prioritization are proposed. Therefore, following a prefiltering step, featurewise principal component analysis (PCA) and groupwise PCA (GPCA) of the matrix (temporal wise) were used to annotate trends of relevant wastewater contaminants. With sparse factorization of data matrices using GPCA, groups of correlated features/mass fragments or adducts were detected, recovered, and prioritized. Similarities and differences in the chemical composition of wastewater samples were observed over time to reveal hidden factors accounting for the structure of the data. The detected features were reduced to 130 relevant time trends related to TrOCs for identification. Exemplarily, as proof of concept, one nontarget pollutant was identified as N-methylpyrrolidone. The developed chemometric strategies of this study are not only suitable for industrial wastewater but also could be efficiently employed for time trend exploration in other scientific fields.
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Affiliation(s)
- Kirsten Purschke
- Environmental Analysis, Currenta GmbH & Co. OHG, CHEMPARK BLG Q18, D-51368 Leverkusen, Germany.,Instrumental Analytical Chemistry (IAC) and Centre for Water and Environmental Research (ZWU), University of Duisburg-Essen, UnivFersitaetsstrasse 5, D-45141 Essen, Germany
| | - Maryam Vosough
- Department of Clean Technologies, Chemistry and Chemical Engineering Research Centre of Iran (CCERCI), P.O. Box 14335-186 Tehran 14968-13151, Iran
| | - Juri Leonhardt
- Production Analytics, Currenta GmbH & Co. OHG, CHEMPARK BLG B562, D-41538 Dormagen, Germany
| | - Markus Weber
- Environmental Analysis, Currenta GmbH & Co. OHG, CHEMPARK BLG Q18, D-51368 Leverkusen, Germany
| | - Torsten C Schmidt
- Instrumental Analytical Chemistry (IAC) and Centre for Water and Environmental Research (ZWU), University of Duisburg-Essen, UnivFersitaetsstrasse 5, D-45141 Essen, Germany.,IWW Zentrum Wasser, Moritzstrasse 26, 45476 Mülheim an der Ruhr, Germany
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Tian L, Verreault J, Houde M, Bayen S. Suspect screening of plastic-related chemicals in northern pike (Esox lucius) from the St. Lawrence River, Canada. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2019; 255:113223. [PMID: 31541811 DOI: 10.1016/j.envpol.2019.113223] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/09/2019] [Revised: 09/06/2019] [Accepted: 09/08/2019] [Indexed: 06/10/2023]
Abstract
Environmental contaminant monitoring traditionally relies on targeted analysis, and very few tools are currently available to monitor "unexpected" or "unknown" compounds. In the present study, a non-targeted workflow (suspect screening) was developed to investigate plastic-related chemicals and other environmental contaminants in a top predator freshwater fish species, the northern pike, from the St. Lawrence River, Canada. Samples were extracted using sonication-assisted liquid extraction and analyzed by high performance liquid chromatography coupled with quadrupole time of flight mass spectrometry (HPLC-QTOF-MS). Ten bisphenol compounds were used to test the analytical performances of the method, and satisfactory results were obtained in terms of instrumental linearity (r2 > 0.97), recoveries, (86.53-119.32%), inter-day precision and method detection limits. The non-targeted workflow data processing parameters were studied, and the peak height filters (peak filtering step) were found to influence significantly the capacity to detect and identify trace chemicals in pike muscle extracts. None of the ten bisphenol analogues were detected in pike extracts suggesting the absence of accumulation for these chemicals in pike muscle. However, the non-targeted workflow enabled the identification of diethyl phthalate (DEP) and perfluorooctanesulfonic acid (PFOS) in pike extracts. This approach thus can be also applied to various contaminants in other biological matrices and environmental samples.
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Affiliation(s)
- Lei Tian
- Department of Food Science and Agricultural Chemistry, McGill University, 21111 Lakeshore Road, Ste-Anne-de-Bellevue, QC, H9X 3V9, Canada
| | - Jonathan Verreault
- Centre de recherche en toxicologie de l'environnement (TOXEN), Département des sciences biologiques, Université du Québec à Montréal, P.O. Box 8888, Succursale Centre-ville, Montréal, QC, H3C 3P8, Canada
| | - Magali Houde
- Aquatic Contaminants Research Division, Environment and Climate Change Canada, Montreal, QC, Canada
| | - Stéphane Bayen
- Department of Food Science and Agricultural Chemistry, McGill University, 21111 Lakeshore Road, Ste-Anne-de-Bellevue, QC, H9X 3V9, Canada.
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Hinnenkamp V, Balsaa P, Schmidt TC. Quantitative screening and prioritization based on UPLC-IM-Q-TOF-MS as an alternative water sample monitoring strategy. Anal Bioanal Chem 2019; 411:6101-6110. [PMID: 31278550 DOI: 10.1007/s00216-019-01994-w] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2019] [Revised: 06/14/2019] [Accepted: 06/19/2019] [Indexed: 12/01/2022]
Abstract
Suspect and non-target screening based on the use of high-resolution mass spectrometry (HRMS) has become more common in water analysis over the past years. However, this only yields lists of features or suspects without quantitative information. To expand the use of HRMS data to a quantitative screening, we have developed and validated a simple and fast method for more than 140 micropollutants using ultra high-performance liquid chromatography coupled to traveling wave ion mobility quadrupole time-of-flight mass spectrometry (UPLC-IM-Q-TOF-MS). Positive findings from suspect and non-target screening can be prioritized and identified by reference standards. The quantitative screening is then performed by additional measurement of calibration standards. This is carried out by means of direct injection and external calibration, without consideration of matrix effects. For all substances, limits of quantification (LOQs) of less or equal than 100 ng/L are achieved. The calibration is carried out in a range of 100 to 1000 ng/L and the results are reported as concentration ranges, in which the concentration of the analyte in the sample is to be expected. All substances were evaluated using quadratic regressions. For the verification of the accuracy, different water matrices (drinking water, groundwater, and surface water) were spiked with five concentration levels (50 ng/L, 300 ng/L, 500 ng/L, 800 ng/L, and 2000 ng/L) and indicate that for the drinking water and groundwater sample, 97% correct assignments were found, whereas for the surface water sample, 88% correct assignments were achieved. A comparative study of water samples of various matrices was accomplished using the quantitative screening analysis method and validated target methods by means of three UPLC tandem mass spectrometry (MS/MS) methods and two gas chromatography (GC) coupled to MS and MS/MS methods. A total of 510 data could be compared, which showed a good match of both approaches in more than 80% of the results. As an alternative strategy for the monitoring of water samples by UPLC-IM-Q-TOF-MS, this method provides quantitative information about target components, besides tentatively or identified substances from suspect or non-target screening. Depending on the resulting concentration range and reporting requirements, validated target methods can be further used for the previously detected targets. Graphical abstract.
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Affiliation(s)
- Vanessa Hinnenkamp
- IWW Water Centre, Moritzstraße 26, 45476, Muelheim an der Ruhr, Germany.,Instrumental Analytical Chemistry and Centre for Water and Environmental Research (ZWU), Universitaetsstrasse 5, 45141, Essen, Germany
| | - Peter Balsaa
- IWW Water Centre, Moritzstraße 26, 45476, Muelheim an der Ruhr, Germany
| | - Torsten C Schmidt
- IWW Water Centre, Moritzstraße 26, 45476, Muelheim an der Ruhr, Germany. .,Instrumental Analytical Chemistry and Centre for Water and Environmental Research (ZWU), Universitaetsstrasse 5, 45141, Essen, Germany.
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