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Khatua S, Simal-Gandara J, Acharya K. Myco-remediation of plastic pollution: current knowledge and future prospects. Biodegradation 2024; 35:249-279. [PMID: 37665521 PMCID: PMC10950981 DOI: 10.1007/s10532-023-10053-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2023] [Accepted: 08/15/2023] [Indexed: 09/05/2023]
Abstract
To date, enumerable fungi have been reported to participate in the biodegradation of several notorious plastic materials following their isolation from soil of plastic-dumping sites, marine water, waste of mulch films, landfills, plant parts and gut of wax moth. The general mechanism begins with formation of hydrophobin and biofilm proceding to secretion of specific plastic degarding enzymes (peroxidase, hydrolase, protease and urease), penetration of three dimensional substrates and mineralization of plastic polymers into harmless products. As a result, several synthetic polymers including polyethylene, polystyrene, polypropylene, polyvinyl chloride, polyurethane and/or bio-degradable plastics have been validated to deteriorate within months through the action of a wide variety of fungal strains predominantly Ascomycota (Alternaria, Aspergillus, Cladosporium, Fusarium, Penicillium spp.). Understanding the potential and mode of operation of these organisms is thus of prime importance inspiring us to furnish an up to date view on all the presently known fungal strains claimed to mitigate the plastic waste problem. Future research henceforth needs to be directed towards metagenomic approach to distinguish polymer degrading microbial diversity followed by bio-augmentation to build fascinating future of waste disposal.
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Affiliation(s)
- Somanjana Khatua
- Department of Botany, Faculty of Science, University of Allahabad, Prayagraj, Uttar Pradesh, 211002, India
| | - Jesus Simal-Gandara
- Nutrition and Bromatology Group, Department of Analytical Chemistry and Food Science, Faculty of Science, Universidade de Vigo, 32004, Ourense, Spain.
| | - Krishnendu Acharya
- Molecular and Applied Mycology and Plant Pathology Laboratory, Department of Botany, Centre of Advanced Study, University of Calcutta, 35, Ballygunge Circular Road, Kolkata, West Bengal, 700019, India.
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2
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Zhang Z, Zhang Q, Yang H, Cui L, Qian H. Mining strategies for isolating plastic-degrading microorganisms. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024; 346:123572. [PMID: 38369095 DOI: 10.1016/j.envpol.2024.123572] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/27/2023] [Revised: 01/29/2024] [Accepted: 02/13/2024] [Indexed: 02/20/2024]
Abstract
Plastic waste is a growing global pollutant. Plastic degradation by microorganisms has captured attention as an earth-friendly tactic. Although the mechanisms of plastic degradation by bacteria, fungi, and algae have been explored over the past decade, a large knowledge gap still exists regarding the identification, sorting, and cultivation of efficient plastic degraders, primarily because of their uncultivability. Advances in sequencing techniques and bioinformatics have enabled the identification of microbial degraders and related enzymes and genes involved in plastic biodegradation. In this review, we provide an outline of the situation of plastic degradation and summarize the methods for effective microbial identification using multidisciplinary techniques such as multiomics, meta-analysis, and spectroscopy. This review introduces new strategies for controlling plastic pollution in an environmentally friendly manner. Using this information, highly efficient and colonizing plastic degraders can be mined via targeted sorting and cultivation. In addition, based on the recognized rules and plastic degraders, we can perform an in-depth analysis of the associated degradation mechanism, metabolic features, and interactions.
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Affiliation(s)
- Ziyao Zhang
- College of Environment, Zhejiang University of Technology, Hangzhou, 310032, PR China
| | - Qi Zhang
- College of Environment, Zhejiang University of Technology, Hangzhou, 310032, PR China
| | - Huihui Yang
- College of Environment, Zhejiang University of Technology, Hangzhou, 310032, PR China
| | - Li Cui
- Key Laboratory of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, PR China
| | - Haifeng Qian
- College of Environment, Zhejiang University of Technology, Hangzhou, 310032, PR China.
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3
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Lakhdari W, Benyahia I, Bouhenna MM, Bendif H, Khelafi H, Bachir H, Ladjal A, Hammi H, Mouhoubi D, Khelil H, Alomar TS, AlMasoud N, Boufafa N, Boufahja F, Dehliz A. Exploration and Evaluation of Secondary Metabolites from Trichoderma harzianum: GC-MS Analysis, Phytochemical Profiling, Antifungal and Antioxidant Activity Assessment. Molecules 2023; 28:5025. [PMID: 37446686 DOI: 10.3390/molecules28135025] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2023] [Revised: 06/07/2023] [Accepted: 06/22/2023] [Indexed: 07/15/2023] Open
Abstract
In this study, we investigated in vitro the potential of Trichoderma harzianum to produce bioactive secondary metabolites that can be used as alternatives to synthetic compounds. The study focused on analyzing two extracts of T. harzianum using ethyl acetate and n-butanol solvents with different polarities. The extracts were examined using phytochemical analysis to determine the content of polyphenols, flavonoids, tannins, and alkaloids. Thin-layer chromatography (TLC) and Gas chromatography-mass spectroscopy (GC-MS) analysis were used to profile volatile organic metabolites (VOCs) present in the extracts. Furthermore, the extracts were tested for their antifungal ability using the poison food technique. For measuring antioxidant activity, the 1,1-diphenyl-2-picryl-hydrazyl (DPPH) test was used. Trichoderma harzianum was shown to have a significantly high content of tannins and alkaloids, with a noticeable difference between the two extracts. GC-MS analysis identified 33 potential compounds with numerous benefits that could be used in agriculture and the medicinal industry. Moreover, strong antifungal activity was identified against Sclerotinia sclerotiorum by 94.44%, Alternaria sp. by 77.04%, and Fusarium solani by 51.48; similarly, the IC50 of antioxidant activity was estimated for ethyl acetate extract by 71.47% and n-butanol extract by 56.01%. This leads to the conclusion that Trichoderma harzianum VOCs play a significant role as an antifungal and antioxidant agent when taking into account the advantageous bioactive chemicals noted in the extracts. However, to our knowledge, this is the first study in Algeria presenting detailed phytochemical analysis and GC-MS profiling of Trichoderma harzianum for two extracts, ethyl acetate and n-butanol.
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Affiliation(s)
- Wassima Lakhdari
- National Institute of Agronomic Research of Algeria, Touggourt 30200, Algeria
- Valcore Laboratory, Biology Department, Faculty of Life and Nature Sciences, University of Boumerdes, Boumerdes 35000, Algeria
| | - Ibtissem Benyahia
- Laboratory of Biogeochemistry and Desert Environments, Department of Chemistry, Faculty of Mathematics and Material Sciences, University of Kasdi Merbah, Ouargla 30000, Algeria
| | - Mustapha Mounir Bouhenna
- Scientific and Technical Center of Research in Physical and Chemical Analysis (CRAPC), Bou-Ismail 42004, Algeria
| | - Hamdi Bendif
- Department of Natural and Life Sciences, Faculty of Science, University of M'sila, M'sila 28000, Algeria
| | - Hafida Khelafi
- Valcore Laboratory, Biology Department, Faculty of Life and Nature Sciences, University of Boumerdes, Boumerdes 35000, Algeria
| | - Hakim Bachir
- Division of Hydraulic and Bioclimatology, National Institute of Agronomic Research (INRA), Algers 16000, Algeria
| | - Amel Ladjal
- Valcore Laboratory, Biology Department, Faculty of Life and Nature Sciences, University of Boumerdes, Boumerdes 35000, Algeria
| | - Hamida Hammi
- National Institute of Agronomic Research of Algeria, Touggourt 30200, Algeria
| | | | | | - Taghrid S Alomar
- Department of Chemistry, College of Science, Princess Nourah bint Abdulrahman University, P.O. Box 84427, Riyadh 11671, Saudi Arabia
| | - Najla AlMasoud
- Department of Chemistry, College of Science, Princess Nourah bint Abdulrahman University, P.O. Box 84427, Riyadh 11671, Saudi Arabia
| | | | - Fehmi Boufahja
- Biology Department, College of Science, Imam Mohammad Ibn Saud Islamic University (IMSIU), Riyadh 11623, Saudi Arabia
| | - Abderrahmene Dehliz
- National Institute of Agronomic Research of Algeria, Touggourt 30200, Algeria
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4
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Brackmann R, de Oliveira Veloso C, de Castro AM, Langone MAP. Enzymatic post-consumer poly(ethylene terephthalate) (PET) depolymerization using commercial enzymes. 3 Biotech 2023; 13:135. [PMID: 37124991 PMCID: PMC10130296 DOI: 10.1007/s13205-023-03555-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2022] [Accepted: 04/06/2023] [Indexed: 05/02/2023] Open
Abstract
Poly(ethylene terephthalate) (PET) is a synthetic polymer widely used globally. The high PET resistance to biotic degradation and its improper destination result in the accumulation of this plastic in the environment, largely affecting terrestrial and aquatic animals. This work investigated post-consumer PET (PC-PET) degradation using five commercial hydrolase enzymes (Novozym 51032, CalB, Palatase, Eversa, Lipozyme TL). Humicola insolens cutinase (HiC, Novozym 51032) was the most active among the enzymes studied. Several important reaction parameters (enzyme type, dual enzyme system, enzyme concentration, temperature, ultrasound treatment) were evaluated in PC-PET hydrolysis using HiC. The concentration and the proportion (molar ratio) of hydrolysis products, terephthalic acid (TPA), mono(2-hydroxyethyl) terephthalate (MHET), and bis(2-hydroxyethyl) terephthalate (BHET), were significantly changed depending on the reaction temperature. The TPA released at 70 °C was 3.65-fold higher than at 50 °C. At higher temperatures, the conversion of MHET into TPA was favored. The enzymatic PET hydrolysis by HiC was very sensitive to the enzyme concentration, indicating that it strongly adsorbs on the polymer surface. The concentration of TPA, MHET, and BHET increased as the enzyme concentration increased, and a maximum was achieved using 40-50 vol % of HiC. The presented results add relevant data to optimizing enzyme-based PET recycling technologies.
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Affiliation(s)
- Rodrigo Brackmann
- Chemistry Institute, Rio de Janeiro State University (UERJ), Rua São Francisco Xavier, 524, PHLC, IQ, Sl.310, Rio de Janeiro, RJ CEP 20550-013 Brazil
- Federal University of Technology Paraná (UTFPR), Curitiba, Brazil
| | - Cláudia de Oliveira Veloso
- Chemistry Institute, Rio de Janeiro State University (UERJ), Rua São Francisco Xavier, 524, PHLC, IQ, Sl.310, Rio de Janeiro, RJ CEP 20550-013 Brazil
| | | | - Marta Antunes Pereira Langone
- Chemistry Institute, Rio de Janeiro State University (UERJ), Rua São Francisco Xavier, 524, PHLC, IQ, Sl.310, Rio de Janeiro, RJ CEP 20550-013 Brazil
- Federal Institute of Education, Science, and Technology of Rio de Janeiro (IFRJ), Rio de Janeiro, Brazil
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5
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Malafatti-Picca L, Bucioli EC, de Barros Chaves MR, de Castro AM, Valoni É, de Oliveira VM, Marsaioli AJ, Govone JS, de Franceschi de Angelis D, Brienzo M, Attili-Angelis D. Fungal Screening for Potential PET Depolymerization. Polymers (Basel) 2023; 15:polym15061581. [PMID: 36987362 PMCID: PMC10053415 DOI: 10.3390/polym15061581] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2022] [Revised: 02/13/2023] [Accepted: 02/15/2023] [Indexed: 03/30/2023] Open
Abstract
Approximately 400 billion PET bottles are produced annually in the world, of which from 8 to 9 million tons are discarded in oceans. This requires developing strategies to urgently recycle them. PET recycling can be carried out using the microbial hydrolysis of polymers when monomers and oligomers are released. Exploring the metabolic activity of fungi is an environmentally friendly way to treat harmful polymeric waste and obtain the production of monomers. The present study addressed: (i) the investigation of potential of strains with the potential for the depolymerization of PET bottles from different manufacturers (crystallinity of 35.5 and 10.4%); (ii) the search for a culture medium that favors the depolymerization process; and (iii) gaining more knowledge on fungal enzymes that can be applied to PET recycling. Four strains (from 100 fungal strains) were found as promising for conversion into terephthalic acid from PET nanoparticles (npPET): Curvularia trifolii CBMAI 2111, Trichoderma sp. CBMAI 2071, Trichoderma atroviride CBMAI 2073, and Cladosporium cladosporioides CBMAI 2075. The fermentation assays in the presence of PET led to the release of terephthalic acid in concentrations above 12 ppm. Biodegradation was also confirmed using mass variation analyses (reducing mass), scanning electron microscopy (SEM) that showed evidence of material roughness, FTIR analysis that showed band modification, enzymatic activities detected for lipase, and esterase and cutinase, confirmed by monomers/oligomers quantification using high performance liquid chromatography (HPLC-UV). Based on the microbial strains PET depolymerization, the results are promising for the exploration of the selected microbial strain.
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Affiliation(s)
- Lusiane Malafatti-Picca
- Environmental Studies Center (CEA), São Paulo State University (UNESP), Av. 24-A, 1515, Bela Vista, Rio Claro 13506-900, SP, Brazil
| | - Elaine Cristina Bucioli
- Environmental Studies Center (CEA), São Paulo State University (UNESP), Av. 24-A, 1515, Bela Vista, Rio Claro 13506-900, SP, Brazil
| | - Michel Ricardo de Barros Chaves
- Coordination of Natural Sciences, Federal University of Maranhão (UFMA), Av. João Alberto, 700, Bacabal 65700-000, MA, Brazil
| | - Aline Machado de Castro
- Department of Biotechnology, R&D Center, PETROBRAS, Av. Horácio Macedo, 950, Ilha do Fundão, Rio de Janeiro 21941-915, RJ, Brazil
| | - Érika Valoni
- Department of Biotechnology, R&D Center, PETROBRAS, Av. Horácio Macedo, 950, Ilha do Fundão, Rio de Janeiro 21941-915, RJ, Brazil
| | - Valéria Maia de Oliveira
- Division of Microbial Resources, CPQBA, State University of Campinas (Unicamp), Rua Alexandre Cazellato, 999, Paulínia 13148-218, SP, Brazil
| | - Anita Jocelyne Marsaioli
- Institute of Chemistry, State University of Campinas (Unicamp), P.O. Box 6154, Campinas 13084-971, SP, Brazil
| | - José Silvio Govone
- Environmental Studies Center (CEA), São Paulo State University (UNESP), Av. 24-A, 1515, Bela Vista, Rio Claro 13506-900, SP, Brazil
| | - Dejanira de Franceschi de Angelis
- Department of Biochemistry and Microbiology, São Paulo State University (UNESP), Av. 24-A, 1515, Bela Vista, Rio Claro 13506-900, SP, Brazil
| | - Michel Brienzo
- Institute For Research in Bioenergy (IPBEN), São Paulo State University (UNESP), R. 10, 2527, Santana, Rio Claro 13500-230, SP, Brazil
| | - Derlene Attili-Angelis
- Environmental Studies Center (CEA), São Paulo State University (UNESP), Av. 24-A, 1515, Bela Vista, Rio Claro 13506-900, SP, Brazil
- Division of Microbial Resources, CPQBA, State University of Campinas (Unicamp), Rua Alexandre Cazellato, 999, Paulínia 13148-218, SP, Brazil
- Department of Biochemistry and Microbiology, São Paulo State University (UNESP), Av. 24-A, 1515, Bela Vista, Rio Claro 13506-900, SP, Brazil
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6
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Determinants for an Efficient Enzymatic Catalysis in Poly(Ethylene Terephthalate) Degradation. Catalysts 2023. [DOI: 10.3390/catal13030591] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/18/2023] Open
Abstract
The enzymatic degradation of the recalcitrant poly(ethylene terephthalate) (PET) has been an important biotechnological goal. The present review focuses on the state of the art in enzymatic degradation of PET, and the challenges ahead. This review covers (i) enzymes acting on PET, (ii) protein improvements through selection or engineering, (iii) strategies to improve biocatalyst–polymer interaction and monomer yields. Finally, this review discusses critical points on PET degradation, and their related experimental aspects, that include the control of physicochemical parameters. The search for, and engineering of, PET hydrolases, have been widely studied to achieve this, and several examples are discussed here. Many enzymes, from various microbial sources, have been studied and engineered, but recently true PET hydrolases (PETases), active at moderate temperatures, were reported. For a circular economy process, terephtalic acid (TPA) production is critical. Some thermophilic cutinases and engineered PETases have been reported to release terephthalic acid in significant amounts. Some bottlenecks in enzyme performance are discussed, including enzyme activity, thermal stability, substrate accessibility, PET microstructures, high crystallinity, molecular mass, mass transfer, and efficient conversion into reusable fragments.
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7
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Tournier V, Duquesne S, Guillamot F, Cramail H, Taton D, Marty A, André I. Enzymes' Power for Plastics Degradation. Chem Rev 2023; 123:5612-5701. [PMID: 36916764 DOI: 10.1021/acs.chemrev.2c00644] [Citation(s) in RCA: 56] [Impact Index Per Article: 56.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/16/2023]
Abstract
Plastics are everywhere in our modern way of living, and their production keeps increasing every year, causing major environmental concerns. Nowadays, the end-of-life management involves accumulation in landfills, incineration, and recycling to a lower extent. This ecological threat to the environment is inspiring alternative bio-based solutions for plastic waste treatment and recycling toward a circular economy. Over the past decade, considerable efforts have been made to degrade commodity plastics using biocatalytic approaches. Here, we provide a comprehensive review on the recent advances in enzyme-based biocatalysis and in the design of related biocatalytic processes to recycle or upcycle commodity plastics, including polyesters, polyamides, polyurethanes, and polyolefins. We also discuss scope and limitations, challenges, and opportunities of this field of research. An important message from this review is that polymer-assimilating enzymes are very likely part of the solution to reaching a circular plastic economy.
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Affiliation(s)
- Vincent Tournier
- Carbios, Parc Cataroux-Bâtiment B80, 8 rue de la Grolière, 63100 Clermont-Ferrand, France
| | - Sophie Duquesne
- Toulouse Biotechnology Institute, TBI, Université de Toulouse, CNRS, INRAE, INSA, Toulouse, France, 135, avenue de Rangueil, F-31077 Toulouse Cedex 04, France
| | - Frédérique Guillamot
- Carbios, Parc Cataroux-Bâtiment B80, 8 rue de la Grolière, 63100 Clermont-Ferrand, France
| | - Henri Cramail
- Université Bordeaux, CNRS, Bordeaux INP, LCPO, 16 Avenue Pey-Berland, 33600 Pessac, France
| | - Daniel Taton
- Université Bordeaux, CNRS, Bordeaux INP, LCPO, 16 Avenue Pey-Berland, 33600 Pessac, France
| | - Alain Marty
- Carbios, Parc Cataroux-Bâtiment B80, 8 rue de la Grolière, 63100 Clermont-Ferrand, France
| | - Isabelle André
- Toulouse Biotechnology Institute, TBI, Université de Toulouse, CNRS, INRAE, INSA, Toulouse, France, 135, avenue de Rangueil, F-31077 Toulouse Cedex 04, France
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8
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Yang Z, Lou Y, Pan H, Wang H, Yang Q, Zhuge Y, Hu J. Improved Denitrification Performance of Polybutylene Succinate/Corncob Composite Carbon Source by Proper Pretreatment: Performance, Functional Genes and Microbial Community Structure. Polymers (Basel) 2023; 15:polym15040801. [PMID: 36850087 PMCID: PMC9958998 DOI: 10.3390/polym15040801] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2023] [Revised: 01/31/2023] [Accepted: 02/01/2023] [Indexed: 02/08/2023] Open
Abstract
Blending biodegradable polymers with plant materials is an effective method to improve the biodegradability of solid carbon sources and save denitrification costs, but the recalcitrant lignin in plant materials hinders the microbial decomposition of available carbon sources. In the present study, corncob pretreated by different methods was used to prepare polybutylene succinate/corncob (PBS/corncob) composites for biological denitrification. The PBS/corncob composite with alkaline pretreatment achieved the optimal NO3--N removal rate (0.13 kg NO3--N m-3 day-1) with less adverse effects. The pretreatment degree, temperature, and their interaction distinctly impacted the nitrogen removal performance and dissolved organic carbon (DOC) release, while the N2O emission was mainly affected by the temperature and the interaction of temperature and pretreatment degree. Microbial community analysis showed that the bacterial community was responsible for both denitrification and lignocellulose degradation, while the fungal community was primarily in charge of lignocellulose degradation. The outcomes of this study provide an effective strategy for improving the denitrification performance of composite carbon sources.
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9
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Microbial degradation of polyethylene terephthalate: a systematic review. SN APPLIED SCIENCES 2022. [DOI: 10.1007/s42452-022-05143-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022] Open
Abstract
AbstractPlastic pollution levels have increased rapidly in recent years, due to the accumulation of plastic waste, including polyethylene terephthalate (PET). Both high production and the lack of efficient methods for disposal and recycling affect diverse aquatic and terrestrial ecosystems owing to the high accumulation rates of plastics. Traditional chemical and physical degradation techniques have caused adverse effects on the environment; hence, the use of microorganisms for plastic degradation has gained importance recently. This systematic review was conducted for evaluating the reported findings about PET degradation by wild and genetically modified microorganisms to make them available for future work and to contribute to the eventual implementation of an alternative, an effective, and environmentally friendly method for the management of plastic waste such as PET. Both wild and genetically modified microorganisms with the metabolic potential to degrade this polymer were identified, in addition to the enzymes and genes used for genetic modification. The most prevalent wild-type PET-degrading microorganisms were bacteria (56.3%, 36 genera), followed by fungi (32.4%, 30 genera), microalgae (1.4%; 1 genus, namely Spirulina sp.), and invertebrate associated microbiota (2.8%). Among fungi and bacteria, the most prevalent genera were Aspergillus sp. and Bacillus sp., respectively. About genetically modified microorganisms, 50 strains of Escherichia coli, most of them expressing PETase enzyme, have been used. We emphasize the pressing need for implementing biological techniques for PET waste management on a commercial scale, using consortia of microorganisms. We present this work in five sections: an Introduction that highlights the importance of PET biodegradation as an effective and sustainable alternative, a section on Materials and methods that summarizes how the search for articles and manuscripts in different databases was done, and another Results section where we present the works found on the subject, a final part of Discussion and analysis of the literature found and finally we present a Conclusion and prospects.
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10
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Ma M, Wang S, Liu Y, Yu H, Yu S, Ji C, Li H, Nie G, Liu S. Insights into the depolymerization of polyethylene terephthalate in methanol. J Appl Polym Sci 2022. [DOI: 10.1002/app.52814] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Meiyuan Ma
- Key Laboratory of Multiphase Flow Reaction and Separation Engineering of Shandong Province, College of Chemical Engineering Qingdao University of Science and Technology Qingdao China
| | - Shuai Wang
- Key Laboratory of Multiphase Flow Reaction and Separation Engineering of Shandong Province, College of Chemical Engineering Qingdao University of Science and Technology Qingdao China
| | - Yue Liu
- Key Laboratory of Multiphase Flow Reaction and Separation Engineering of Shandong Province, College of Chemical Engineering Qingdao University of Science and Technology Qingdao China
| | - Hailong Yu
- Key Laboratory of Multiphase Flow Reaction and Separation Engineering of Shandong Province, College of Chemical Engineering Qingdao University of Science and Technology Qingdao China
| | - Shitao Yu
- Key Laboratory of Multiphase Flow Reaction and Separation Engineering of Shandong Province, College of Chemical Engineering Qingdao University of Science and Technology Qingdao China
| | - Congcong Ji
- Key Laboratory of Multiphase Flow Reaction and Separation Engineering of Shandong Province, College of Chemical Engineering Qingdao University of Science and Technology Qingdao China
| | - Haiyan Li
- Key Laboratory of Multiphase Flow Reaction and Separation Engineering of Shandong Province, College of Chemical Engineering Qingdao University of Science and Technology Qingdao China
| | - Genkuo Nie
- Key Laboratory of Multiphase Flow Reaction and Separation Engineering of Shandong Province, College of Chemical Engineering Qingdao University of Science and Technology Qingdao China
- Key Laboratory of Pulp and Paper Science & Technology of Ministry of Education Qilu University of Technology (Shandong Academy of Sciences) Jinan China
| | - Shiwei Liu
- Key Laboratory of Multiphase Flow Reaction and Separation Engineering of Shandong Province, College of Chemical Engineering Qingdao University of Science and Technology Qingdao China
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11
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Fungal Enzymes Involved in Plastics Biodegradation. Microorganisms 2022; 10:microorganisms10061180. [PMID: 35744698 PMCID: PMC9230134 DOI: 10.3390/microorganisms10061180] [Citation(s) in RCA: 34] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2022] [Revised: 06/01/2022] [Accepted: 06/07/2022] [Indexed: 12/04/2022] Open
Abstract
Plastic pollution is a growing environmental problem, in part due to the extremely stable and durable nature of this polymer. As recycling does not provide a complete solution, research has been focusing on alternative ways of degrading plastic. Fungi provide a wide array of enzymes specialized in the degradation of recalcitrant substances and are very promising candidates in the field of plastic degradation. This review examines the present literature for different fungal enzymes involved in plastic degradation, describing their characteristics, efficacy and biotechnological applications. Fungal laccases and peroxidases, generally used by fungi to degrade lignin, show good results in degrading polyethylene (PE) and polyvinyl chloride (PVC), while esterases such as cutinases and lipases were successfully used to degrade polyethylene terephthalate (PET) and polyurethane (PUR). Good results were also obtained on PUR by fungal proteases and ureases. All these enzymes were isolated from many different fungi, from both Basidiomycetes and Ascomycetes, and have shown remarkable efficiency in plastic biodegradation under laboratory conditions. Therefore, future research should focus on the interactions between the genes, proteins, metabolites and environmental conditions involved in the processes. Further steps such as the improvement in catalytic efficiency and genetic engineering could lead these enzymes to become biotechnological applications in the field of plastic degradation.
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12
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Dhaka V, Singh S, Anil AG, Sunil Kumar Naik TS, Garg S, Samuel J, Kumar M, Ramamurthy PC, Singh J. Occurrence, toxicity and remediation of polyethylene terephthalate plastics. A review. ENVIRONMENTAL CHEMISTRY LETTERS 2022; 20:1777-1800. [PMID: 35039752 PMCID: PMC8755403 DOI: 10.1007/s10311-021-01384-8] [Citation(s) in RCA: 41] [Impact Index Per Article: 20.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2021] [Accepted: 12/29/2021] [Indexed: 05/31/2023]
Abstract
Polyethylene terephthalate is a common plastic in many products such as viscose rayon for clothing, and packaging material in the food and beverage industries. Polyethylene terephthalate has beneficial properties such as light weight, high tensile strength, transparency and gas barrier. Nonetheless, there is actually increasing concern about plastic pollution and toxicity. Here we review the properties, occurrence, toxicity, remediation and analysis of polyethylene terephthalate as macroplastic, mesoplastic, microplastic and nanoplastic. Polyethylene terephthalate occurs in groundwater, drinking water, soils and sediments. Plastic uptake by humans induces diseases such as reducing migration and proliferation of human mesenchymal stem cells of bone marrow and endothelial progenitor cells. Polyethylene terephthalate can be degraded by physical, chemical and biological methods.
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Affiliation(s)
- Vaishali Dhaka
- Department of Microbiology, Lovely Professional University, Phagwara, Punjab 144411 India
| | - Simranjeet Singh
- Interdisciplinary Centre for Water Research (ICWaR), Indian Institute of Science, Bangalore, 560012 India
| | - Amith G. Anil
- Department of Material Engineering, Indian Institute of Science, Bangalore, 560012 India
| | - T. S. Sunil Kumar Naik
- Interdisciplinary Centre for Water Research (ICWaR), Indian Institute of Science, Bangalore, 560012 India
| | - Shashank Garg
- Department of Microbiology, Lovely Professional University, Phagwara, Punjab 144411 India
| | - Jastin Samuel
- Waste Valorization Research Lab, Lovely Professional University, Phagwara, Punjab 144411 India
| | - Manoj Kumar
- Department of Life Sciences, Central University Jharkhand, Brambe, Ranchi, Jharkhand 835205 India
| | - Praveen C. Ramamurthy
- Interdisciplinary Centre for Water Research (ICWaR), Indian Institute of Science, Bangalore, 560012 India
| | - Joginder Singh
- Department of Microbiology, Lovely Professional University, Phagwara, Punjab 144411 India
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Moyses DN, Teixeira DA, Waldow VA, Freire DMG, Castro AM. Fungal and enzymatic bio-depolymerization of waste post-consumer poly(ethylene terephthalate) (PET) bottles using Penicillium species. 3 Biotech 2021; 11:435. [PMID: 34603913 DOI: 10.1007/s13205-021-02988-1] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2021] [Accepted: 09/07/2021] [Indexed: 10/20/2022] Open
Abstract
Poly(ethylene terephthalate) (PET) is a petroleum-based plastic that is massively produced and used worldwide. A promising PET recycling process to circumvent petroleum feedstock consumption and help to reduce environmental pollution is microbial or enzymatic biodegradation of post-consumer (PC) PET packages to its monomers-terephthalic acid (TPA) and ethylene glycol (EG)-or to key intermediates in PET synthesis-such as mono- and bis-(2-hydroxyethyl) terephthalate (MHET and BHET). Two species of filamentous fungi previously characterized as lipase producers (Penicillium restrictum and P. simplicissimum) were evaluated in submerged fermentation for induction of lipase production by two inducers (BHET and amorphous PET), and for biodegradation of two substrates (BHET and PC-PET). BHET induced lipase production in P. simplicissimum, achieving a peak of 606.4 U/L at 49 h (12.38 U/L.h), representing an almost twofold increase in comparison to the highest peak in the control (without inducers). Microbial biodegradation by P. simplicissimum after 28 days led to a 3.09% mass loss on PC-PET fragments. In contrast, enzymatic PC-PET depolymerization by cell-free filtrates from a P. simplicissimum culture resulted in low concentrations of BHET, MHET and TPA (up to 9.51 µmol/L), suggesting that there are mechanisms at the organism level that enhance biodegradation. Enzymatic BHET hydrolysis revealed that P. simplicissimum extracellular enzymes catalyze the release of MHET as the predominant product. Our results show that P. simplicissimum is a promising biodegrader of PC-PET that can be further explored for monomer recovery in the context of feedstock recycling processes.
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14
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Carniel A, Waldow VDA, Castro AMD. A comprehensive and critical review on key elements to implement enzymatic PET depolymerization for recycling purposes. Biotechnol Adv 2021; 52:107811. [PMID: 34333090 DOI: 10.1016/j.biotechadv.2021.107811] [Citation(s) in RCA: 30] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2021] [Revised: 07/15/2021] [Accepted: 07/26/2021] [Indexed: 11/25/2022]
Abstract
Plastics production and recycling chains must be refitted to a circular economy. Poly(ethylene terephthalate) (PET) is especially suitable for recycling because of its hydrolysable ester bonds and high environmental impact due to employment in single-use packaging, so that recycling processes utilizing enzymes are a promising biotechnological route to monomer recovery. However, enzymatic PET depolymerization still faces challenges to become a competitive route at an industrial level. In this review, PET characteristics as a substrate for enzymes are discussed, as well as the analytical methods used to evaluate the reaction progress. A comprehensive view on the biocatalysts used is discussed. Subsequently, different strategies pursued to improve enzymatic PET depolymerization are presented, including enzyme modification through mutagenesis, utilization of multiple enzymes, improvement of the interaction between enzymes and the hydrophobic surface of PET, and various reaction conditions (e.g., particle size, reaction medium, agitation, and additives). All scientific developments regarding these different aspects of PET depolymerization are crucial to offer a scalable and competitive technology. However, they must be integrated into global processes from upstream to downstream, discussed here at the final sections, which must be evaluated for their economic feasibility and life cycle assessment to check if PET recycling chains can be broadly incorporated into the future circular economy.
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Affiliation(s)
- Adriano Carniel
- School of Chemistry, Federal University of Rio de Janeiro (UFRJ) - Cidade Universitária, Rio de Janeiro, RJ CEP 21949-900, Brazil
| | - Vinicius de Abreu Waldow
- Petrobras Research, Development and Innovation Center (Cenpes), Av. Horácio Macedo, n° 950 - Cidade Universitária, Rio de Janeiro, RJ CEP 21941-915, Brazil
| | - Aline Machado de Castro
- Petrobras Research, Development and Innovation Center (Cenpes), Av. Horácio Macedo, n° 950 - Cidade Universitária, Rio de Janeiro, RJ CEP 21941-915, Brazil.
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15
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Ramdass AC, Rampersad SN. Diversity and Oil Degradation Potential of Culturable Microbes Isolated from Chronically Contaminated Soils in Trinidad. Microorganisms 2021; 9:1167. [PMID: 34071489 PMCID: PMC8230346 DOI: 10.3390/microorganisms9061167] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2021] [Revised: 05/24/2021] [Accepted: 05/26/2021] [Indexed: 11/29/2022] Open
Abstract
Trinidad and Tobago is the largest producer of oil and natural gas in Central America and the Caribbean. Natural crude oil seeps, in addition to leaking petroleum pipelines, have resulted in chronic contamination of the surrounding terrestrial environments since the time of petroleum discovery, production, and refinement in Trinidad. In this study, we isolated microbes from soils chronically contaminated with crude oil using a culture-dependent approach with enrichment. The sampling of eight such sites located in the southern peninsula of Trinidad revealed a diverse microbial composition and novel oil-degrading filamentous fungi and yeast as single-isolate degraders and naturally occurring consortia, with specific bacterial species not previously reported in the literature. Multiple sequence comparisons and phylogenetic analyses confirmed the identity of the top degraders. The filamentous fungal community based on culturable species was dominated by Ascomycota, and the recovered yeast isolates were affiliated with Basidiomycota (65.23%) and Ascomycota (34.78%) phyla. Enhanced biodegradation of petroleum hydrocarbons is maintained by biocatalysts such as lipases. Five out of seven species demonstrated extracellular lipase activity in vitro. Our findings could provide new insights into microbial resources from chronically contaminated terrestrial environments, and this information will be beneficial to the bioremediation of petroleum contamination and other industrial applications.
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Affiliation(s)
| | - Sephra N. Rampersad
- Biochemistry Research Laboratory (Rm216), Department of Life Sciences, Faculty of Science and Technology, The University of the West Indies, Trinidad and Tobago, West Indies;
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da Costa AM, de Oliveira Lopes VR, Vidal L, Nicaud JM, de Castro AM, Coelho MAZ. Poly(ethylene terephthalate) (PET) degradation by Yarrowia lipolytica: Investigations on cell growth, enzyme production and monomers consumption. Process Biochem 2020. [DOI: 10.1016/j.procbio.2020.04.001] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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