1
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Size and shape of cycloamylose estimated using column chromatography coupled with small-angle X-ray scattering. Food Hydrocoll 2020. [DOI: 10.1016/j.foodhyd.2020.105948] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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2
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Venkatachalam G, Venkatesan N, Suresh G, Doble M. Cyclic β-(1, 2)-glucan blended poly DL lactic co glycolic acid (PLGA 10:90) nanoparticles for drug delivery. Heliyon 2019; 5:e02289. [PMID: 31517109 PMCID: PMC6732734 DOI: 10.1016/j.heliyon.2019.e02289] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2019] [Revised: 04/12/2019] [Accepted: 08/08/2019] [Indexed: 11/16/2022] Open
Abstract
Our group had previously reported the encapsulation efficiency of cyclic β-(1, 2)-glucan for various drugs. The current study is aimed at evaluating the use of glucan as a drug carrier system by blending with poly lactic-co- glycolic acid (L:G = 10:90). Nanoparticles of glucan (0.5, 5, 10 and 20 wt %) blended with PLGA and gentamicin were synthesized. Encapsulation efficiency was higher for the blends (93% with 20 wt % of glucan) than the PLGA alone (79.8%). The presence of glucan enhanced both the biodegradability, and biocompatibility of PLGA. Degradation of the nanoparticles in vitro, was autocatalytic with an initial burst release of active drug and the release profile was modeled using the Korsmeyer-Peppas scheme. In vivo studies indicated that the drug released from the blends had high volume of distribution, and greater clearance from the system. Pharmacokinetics of the drug was predicted using a double exponential decay model. Blending with PLGA improved the drug release characteristics of the cyclic β-(1, 2)-glucan.
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Affiliation(s)
| | | | | | - Mukesh Doble
- Bioengineering and Drug Design Lab, Department of Biotechnology, IIT-Madras, Chennai, 600036, India
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3
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Hu Y, Kim H, Shinde VV, Jeong D, Choi Y, Cho E, Jung S. Carboxymethyl cyclosophoraoses as a flexible pH-responsive solubilizer for pindolol. Carbohydr Polym 2017; 175:493-501. [DOI: 10.1016/j.carbpol.2017.08.026] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2017] [Revised: 08/04/2017] [Accepted: 08/06/2017] [Indexed: 11/26/2022]
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4
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A synthetic encapsulating emulsifier using complex-forming pentacosadiynoyl cyclosophoraoses (cyclic β-(1, 2)- d -glucan). J IND ENG CHEM 2016. [DOI: 10.1016/j.jiec.2016.08.032] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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5
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Cho E, Jeong D, Choi Y, Jung S. Properties and current applications of bacterial cyclic β-glucans and their derivatives. J INCL PHENOM MACRO 2016. [DOI: 10.1007/s10847-016-0630-3] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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6
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Zhang H, Palma AS, Zhang Y, Childs RA, Liu Y, Mitchell DA, Guidolin LS, Weigel W, Mulloy B, Ciocchini AE, Feizi T, Chai W. Generation and characterization of β1,2-gluco-oligosaccharide probes from Brucella abortus cyclic β-glucan and their recognition by C-type lectins of the immune system. Glycobiology 2016; 26:1086-1096. [PMID: 27053576 PMCID: PMC5072146 DOI: 10.1093/glycob/cww041] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2016] [Revised: 03/17/2016] [Accepted: 03/24/2016] [Indexed: 12/16/2022] Open
Abstract
The β1,2-glucans produced by bacteria are important in invasion, survival and immunomodulation in infected hosts be they mammals or plants. However, there has been a lack of information on proteins which recognize these molecules. This is partly due to the extremely limited availability of the sequence-defined oligosaccharides and derived probes for use in the study of their interactions. Here we have used the cyclic β1,2-glucan (CβG) of the bacterial pathogen Brucella abortus, after removal of succinyl side chains, to prepare linearized oligosaccharides which were used to generate microarrays. We describe optimized conditions for partial depolymerization of the cyclic glucan by acid hydrolysis and conversion of the β1,2-gluco-oligosaccharides, with degrees of polymerization 2-13, to neoglycolipids for the purpose of generating microarrays. By microarray analyses, we show that the C-type lectin receptor DC-SIGNR, like the closely related DC-SIGN we investigated earlier, binds to the β1,2-gluco-oligosaccharides, as does the soluble immune effector serum mannose-binding protein. Exploratory studies with DC-SIGN are suggestive of the recognition also of the intact CβG by this receptor. These findings open the way to unravelling mechanisms of immunomodulation mediated by β1,2-glucans in mammalian systems.
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Affiliation(s)
- Hongtao Zhang
- Glycosciences Laboratory, Department of Medicine, Imperial College London, London W12 0NN, UK.,Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi 214122, China
| | - Angelina S Palma
- Glycosciences Laboratory, Department of Medicine, Imperial College London, London W12 0NN, UK .,UCIBIO-REQUIMTE, Department of Chemistry, Faculty of Science and Technology, NOVA Universidade de Lisboa, Caparica 2829-516, Portugal
| | - Yibing Zhang
- Glycosciences Laboratory, Department of Medicine, Imperial College London, London W12 0NN, UK
| | - Robert A Childs
- Glycosciences Laboratory, Department of Medicine, Imperial College London, London W12 0NN, UK
| | - Yan Liu
- Glycosciences Laboratory, Department of Medicine, Imperial College London, London W12 0NN, UK
| | - Daniel A Mitchell
- CSRI-UHCW, Walsgrave Campus, University of Warwick, Coventry CV2 2DX, UK
| | - Leticia S Guidolin
- Instituto de Investigaciones Biotecnológicas "Dr. Rodolfo A. Ugalde", Instituto Tecnológico de Chascomús (IIB-INTECH), Universidad Nacional de San Martín, San Martín, Buenos Aires 1650, Argentina
| | | | - Barbara Mulloy
- Glycosciences Laboratory, Department of Medicine, Imperial College London, London W12 0NN, UK
| | - Andrés E Ciocchini
- Instituto de Investigaciones Biotecnológicas "Dr. Rodolfo A. Ugalde", Instituto Tecnológico de Chascomús (IIB-INTECH), Universidad Nacional de San Martín, San Martín, Buenos Aires 1650, Argentina
| | - Ten Feizi
- Glycosciences Laboratory, Department of Medicine, Imperial College London, London W12 0NN, UK
| | - Wengang Chai
- Glycosciences Laboratory, Department of Medicine, Imperial College London, London W12 0NN, UK
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7
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Cho E, Jung S. Supramolecular Complexation of Carbohydrates for the Bioavailability Enhancement of Poorly Soluble Drugs. Molecules 2015; 20:19620-46. [PMID: 26516835 PMCID: PMC6332515 DOI: 10.3390/molecules201019620] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2015] [Revised: 10/16/2015] [Accepted: 10/22/2015] [Indexed: 01/22/2023] Open
Abstract
In this review, a comprehensive overview of advances in the supramolecular complexes of carbohydrates and poorly soluble drugs is presented. Through the complexation process, poorly soluble drugs could be efficiently delivered to their desired destinations. Carbohydrates, the most abundant biomolecules, have diverse physicochemical properties owing to their inherent three-dimensional structures, hydrogen bonding, and molecular recognition abilities. In this regard, oligosaccharides and their derivatives have been utilized for the bioavailability enhancement of hydrophobic drugs via increasing the solubility or stability. By extension, polysaccharides and their derivatives can form self-assembled architectures with poorly soluble drugs and have shown increased bioavailability in terms of the sustained or controlled drug release. These supramolecular systems using carbohydrate will be developed consistently in the field of pharmaceutical and medical application.
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Affiliation(s)
- Eunae Cho
- Center for Biotechnology Research in UBITA (CBRU), Institute for Ubiquitous Information Technology and Applications (UBITA), Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 05029, Korea.
| | - Seunho Jung
- Center for Biotechnology Research in UBITA (CBRU), Institute for Ubiquitous Information Technology and Applications (UBITA), Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 05029, Korea.
- Microbial Carbohydrate Resource Bank (MBRC), Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 05029, Korea.
- Department of Bioscience and Biotechnology, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 05029, Korea.
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8
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Conformation and physical properties of cycloisomaltooligosaccharides in aqueous solution. Carbohydr Polym 2014; 99:432-7. [DOI: 10.1016/j.carbpol.2013.07.089] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2013] [Revised: 07/18/2013] [Accepted: 07/26/2013] [Indexed: 11/21/2022]
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9
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Stokke BT, Drager KI, Yuguchi Y, Urakawa H, Kajiwara K. Small-angle X-ray scattering and rheological characterization of alginate gels. ACTA ACUST UNITED AC 2011. [DOI: 10.1002/masy.19971200111] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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10
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Kajiwara K, Miyamoto T. Progress in Structural Characterization of Functional Polysaccharides. POLYSACCHARIDES 2010. [DOI: 10.1201/9781420030822.ch1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/17/2023] Open
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11
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First isolation and structural determination of cyclic β-(1→2)-glucans from an alga, Chlorella pyrenoidosa. Carbohydr Res 2008; 343:2623-33. [DOI: 10.1016/j.carres.2008.07.009] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2008] [Revised: 07/11/2008] [Accepted: 07/16/2008] [Indexed: 11/19/2022]
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12
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Methanolysis of ethyl esters of N-acetyl amino acids catalyzed by cyclosophoraoses isolated from Rhizobium meliloti. Carbohydr Res 2008; 343:274-81. [DOI: 10.1016/j.carres.2007.10.033] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2007] [Revised: 10/19/2007] [Accepted: 10/30/2007] [Indexed: 11/23/2022]
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13
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Methanolysis of 7-Acetoxy-4-Methylcoumarin Catalyzed by Cyclosophoraoses Isolated from Rhizobium meliloti. B KOREAN CHEM SOC 2008. [DOI: 10.5012/bkcs.2008.29.1.228] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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14
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Gerbst AG, Grachev AA, Shashkov AS, Nifantiev NE. Computation techniques in the conformational analysis of carbohydrates. RUSSIAN JOURNAL OF BIOORGANIC CHEMISTRY 2007. [DOI: 10.1134/s1068162007010037] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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15
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Preparation of Amino-cyclosophoraoses from the Neutral Cyclosophoraoses Isolated fromRhizobium leguminosarum bv. trifolii. B KOREAN CHEM SOC 2006. [DOI: 10.5012/bkcs.2006.27.9.1485] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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16
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Kim H, Jeong K, Cho KW, Paik SR, Jung S. Molecular dynamics simulations of a cyclic-β-(1→2) glucan containing an α-(1→6) linkage as a ‘molecular alleviator’ for the macrocyclic conformational strain. Carbohydr Res 2006; 341:1011-9. [PMID: 16546149 DOI: 10.1016/j.carres.2006.02.025] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2005] [Revised: 02/18/2006] [Accepted: 02/22/2006] [Indexed: 11/24/2022]
Abstract
The conformational preferences of a cyclic osmoregulated periplasmic glucan of Ralstonia solanacearum (OPGR), which is composed of 13 glucose units and linked entirely via beta-(1-->2) linkages excluding one alpha-(1-->6) linkage, were characterized by molecular dynamics simulations. Of the three force fields modified for carbohydrates that were applied to select a suitable one for the cyclic glucan, the carbohydrate solution force field (CSFF) was found to most accurately simulate the cyclic molecule. To determine the conformational characteristics of OPGR, we investigated the glycosidic dihedral angle distribution, fluctuation, and the potential energy of the glucan and constructed hypothetical cyclic (CYS13) and linear (LINEAR) glucans. All beta-(1-->2)-glycosidic linkages of OPGR adopted stable conformations, and the dihedral angles fluctuated in this energy region with some flexibility. However, despite the inherent flexibility of the alpha-(1-->6) linkage, the dihedral angles have no transition and are more rigid than that in a linear glucan. CYS13, which consists of only beta-(1-->2) linkages, is somewhat less flexible than other glycans, and one of its linkages adopts a higher energy conformation. In addition, the root-mean-square fluctuation of this linkage is lower than that of other linkages. Furthermore, the potential energy of glucans increases in the order of LINEAR, OPGR, and CYS13. These results provide evidence of the existence of conformational constraints in the cyclic glucan. The alpha-(1-->6)-glycosidic linkage can relieve this constraint more efficiently than the beta-(1-->2) linkage. The conformation of OPGR can reconcile the tendency for individual glycosidic bonds to adopt energetically favorable conformations with the requirement for closure of the macrocyclic ring by losing the inherent flexibility of the alpha-(1-->6)-glycosidic linkage.
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Affiliation(s)
- Hyunmyung Kim
- Department of Bioscience and Biotechnology, Bio/Molecular Informatics Center, Konkuk University, 1 Hwayang-dong, Gwangjin-gu, Seoul 143-701, Republic of Korea
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17
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Park H, Jung S. Separation of some chiral flavonoids by microbial cyclosophoraoses and their sulfated derivatives in micellar electrokinetic chromatography. Electrophoresis 2005; 26:3833-8. [PMID: 16167311 DOI: 10.1002/elps.200500194] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
Neutral cyclosophoraoses (Cys) and highly sulfated cyclosophoraoses (HS-Cys) were successfully applied as chiral selectors with SDS for the separation of some chiral flavonoids in MEKC. HS-Cys were synthesized by the chemical modification of a family of neutral Cys isolated from a soil microorganism, Rhizobium meliloti 2011. Chiral catechin was separated with a resolution (R(s)) of 0.754 by neutral Cys and SDS. In the case of isosakuranetin and neohesperidin, resolution (R(s)) values of 1.483 and 1.306 were obtained with HS-Cys and SDS, respectively.
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Affiliation(s)
- Heylin Park
- Department of Advanced Technology Fusion, Bio/Molecular Informatics Center, Konkuk University, Seoul, Korea
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18
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pH-Dependent On-off Inclusion Complexation of Carboxymethylated Cyclosophoraoses with Neutral Red. B KOREAN CHEM SOC 2005. [DOI: 10.5012/bkcs.2005.26.4.675] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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19
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Lee S, Jung S. Cyclosophoraose as a catalytic carbohydrate for methanolysis. Carbohydr Res 2004; 339:461-8. [PMID: 15013382 DOI: 10.1016/j.carres.2003.11.004] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2003] [Accepted: 11/13/2003] [Indexed: 10/26/2022]
Abstract
A novel catalytic methanolysis can be induced by a natural cyclooligosaccharide, a cyclosophoraose (cyclic-(1-->2)-beta-D-glucan, Cys), which is a member of a family of unbranched cyclooligosaccharides produced as intra- or extraoligosaccharides by soil microorganisms of the genus, Rhizobium. Cys catalyzed the methanolysis for 5(4H)-oxazolones and various phospholipids. Cys enhanced the methanolysis reaction about 9200-fold for a benzylidene oxazolone or 250-fold for dipalmitoylphosphatidylcholine comparing with control. In this study, we describe that natural cyclosophoraoses isolated from the Rhizobium species function as catalytic carbohydrates for the methanolysis.
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Affiliation(s)
- Sanghoo Lee
- Department of Microbial Engineering and Bio/Molecular Informatics Center, Konkuk University, 1 Hwayang-dong, Gwangjin-gu, Seoul 143-701, South Korea
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20
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Lee S, Park H, Seo D, Choi Y, Jung S. Synthesis and characterization of carboxymethylated cyclosophoraose, and its inclusion complexation behavior. Carbohydr Res 2004; 339:519-27. [PMID: 15013389 DOI: 10.1016/j.carres.2003.11.011] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2003] [Accepted: 11/13/2003] [Indexed: 11/19/2022]
Abstract
Carboxymethylated cyclosophoraoses (CM-Cys) were synthesized by chemical modification of a family of neutral cyclosophoraoses isolated from Rhizobium leguminosarum biovar trifolii. Structural analyses of the CM-Cys were carried out using NMR and FTIR spectroscopies, and the molecular weight distributions were confirmed with MALDI-TOF mass spectrometry. Based on structural characterization, native cyclosophoraoses were successfully substituted with carboxymethyl groups at the OH-4 and OH-6 of the glucose residues with degrees of substitution (DS) ranging from 0.012 to 0.290. CM-Cys was also used as a host for the inclusion complexation with hydrobenzoin (HB) and N-acetyltryptophan (N-AcTrp) as guest molecules. NMR spectroscopic analyses of the complexes showed that the CM-Cys induced chemical shifts of some protons of the guest molecules upon the complexation. Phase solubility studies of the guest molecules by CM-Cys were performed using HPLC, and the results were compared with those of native cyclosophoraoses. The solubility of HB and N-AcTrp was enhanced by the CM-Cys about 5.1- and 299-fold, respectively.
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Affiliation(s)
- Sanghoo Lee
- Department of Microbial Engineering and Bio/Molecular Informatics Center, Konkuk University, 1 Hwayang-dong, Gwangjin-gu, Seoul 143-701, South Korea
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21
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Lee S, Choi Y, Lee S, Jeong K, Jung S. Chiral recognition based on enantioselective interactions of propranolol enantiomers with cyclosophoraoses isolated fromRhizobium meliloti. Chirality 2004; 16:204-10. [PMID: 14770418 DOI: 10.1002/chir.20010] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Cyclosophoraoses isolated from Rhizobium meliloti, as an NMR chiral shift agent, were used to discriminate propranolol enantiomers. Continuous variation plot made from the complex of cyclosophoraoses with propranolol showed that the diastereomeric complex had predominantly 1:1 stoichiometry through UV spectroscopic analysis. The chiral recognition of propranolol enantiomers by cyclosophoraoses was investigated through the determination of binding constant based on the (13)C NMR chemical shift changes. The averaged K(obs) values from the plots were 55.7 M(-1) for (R)-(+)-propranolol and 36.6 M(-1) for (S)-(-)-propranolol, respectively. Enantioselectivity (alpha = K(R+)/K(S(-)) of 1.52 was then obtained. Computational calculation also revealed that (R)-(+) propranolol was more tightly bound with cyclosophoraose than (S)-(-)-propranolol due to the enhanced van der Waals interaction.
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Affiliation(s)
- Sanghoo Lee
- Department of Microbial Engineering, and Bio/Molecular Informatics Center, Konkuk University, 1 Hwaynag-dong Gwangjin-gu, Seoul 143-701, South Korea
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22
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Lee S, Jung S. Enantioseparation using cyclosophoraoses as a novel chiral additive in capillary electrophoresis. Carbohydr Res 2003; 338:1143-6. [PMID: 12706983 DOI: 10.1016/s0008-6215(03)00083-1] [Citation(s) in RCA: 37] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Abstract
Cyclosophoraoses, cyclic beta-(1-->2)-D-glucans produced by Rhizobium meliloti 2011, were used as a novel chiral additive for the separation of terbutaline, amethopterin, thyroxine and N-acetylphenylalanine enantiomers in aqueous capillary electrophoresis (CE). Enantioseparation took place in the normal- or reversed-polarity mode when a high concentration of neutral (60 mM) or anionic (40 mM) cyclosophoraoses was added to the background electrolyte (BGE).
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Affiliation(s)
- Sanghoo Lee
- Department of Microbial Engineering and Bio/Molecular Informatics Center, Konkuk University, 1 Hwayang-dong, Gwangjin-gu, Seoul 143-701, South Korea
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23
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Lee S, Jung S. 13C NMR spectroscopic analysis on the chiral discrimination of N-acetylphenylalanine, catechin and propranolol induced by cyclic-(1-->2)-beta-D-glucans (cyclosophoraoses). Carbohydr Res 2002; 337:1785-9. [PMID: 12423959 DOI: 10.1016/s0008-6215(02)00286-0] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Cyclosophoraoses (cyclic-(1-->2)-beta-D-glucans) produced by Rhizobium meliloti were used as a novel chiral NMR solvating agent. 13C NMR spectroscopic analysis as an enantiodiscriminating tool was carried out where NMR signal splittings were observed on the interactions of cyclosophoraoses with the enantiomers of N-acetylphenylalanine, catechin and propranolol. The 13C chemical shifts of cyclosophoraoses induced by the enantiomeric interactions predominantly occurred at the C-1 and C-2 carbons associated with the -glycosidic linkage.
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Affiliation(s)
- Sanghoo Lee
- Department of Microbial Engineering and Bio/Molecular Informatics Center, Konkuk University, Hwayang-dong 1, Gwangjin-gu, Seoul 143-701, South Korea
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24
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Kim H, Jeong K, Lee S, Jung S. Molecular dynamics simulation of cyclosophoroheptadecaose (Cys-A). J Comput Aided Mol Des 2002; 16:601-10. [PMID: 12602953 DOI: 10.1023/a:1021923815450] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
The conformational preferences of cyclosophoroheptadecaose (Cys-A), which is a member of a class of cyclic (1 --> 2)-beta-D-glucan, were characterized by molecular dynamics simulations. Simulated annealing and constant temperature molecular dynamics simulations were performed on the Cys-A. The simulations produced various types of compact and asymmetrical conformations of Cys-A. Excellent agreement was found between experimental data and corresponding values predicted by molecular modeling. Most glycosidic linkages were concentrated in the lowest energy region of phi-psi energy map, and the values of radius of gyration (R(G)) and the nuclear Overhauser effect (NOE) distance data derived from our simulations were finely consistent with the reported experimental values. This result will also give novel insights for the molecular complexation mechanism of Cys-A with various guest chemicals.
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Affiliation(s)
- Hyunmyung Kim
- Department of Microbial Engineering, and Bio/Molecular Informatics Center, Konkuk University, 1 Hwayang-dong, Gwangjin-gu, Seoul 143-701, South Korea
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25
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Choi YH, Yang CH, Kim HW, Jung S. Molecular dynamics simulations of cyclohenicosakis-[(1-->2)-beta-D-gluco-henicosapyranosyl], a cyclic (1-->2)-beta-D-glucan (a 'cyclosophoraose') of DP 21. Carbohydr Res 2000; 326:227-34. [PMID: 10903031 DOI: 10.1016/s0008-6215(00)00050-1] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We report molecular dynamics simulations of cyclohenicosakis-[(1-->2)-beta-D-gluco-henicosapyranosyl], termed 'cyclosophohenicosamer', a member of a class of cyclic (1-->2)-beta-D-glucans ('cyclosophoraoses'). Our goals were to provide insights into the conformational preferences of these cyclosophoraoses. Simulated annealing and constant-temperature molecular dynamics calculations were performed on the DP 21 cyclosophohenicosamer. The radius of gyration (R(G)) of the molecule and the conformation of glycosidic dihedral angles were used to analyze the result of computational studies. Most glycosidic linkages were concentrated in the lowest-energy region of the phi-psi energy map, and the values of radius of gyration from our simulations were consistent with the reported experimental value. The simulations produced various types of compact and asymmetric conformations within reasonable ranges of the glycosidic linkage conformation and radius of gyration. The results indicate the presence of a high degree of molecular flexibility of cyclosophohenicosamer and suggest the uniqueness of inclusion complexation with other molecules through this molecular flexibility.
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Affiliation(s)
- Y H Choi
- Department of Chemistry, Seoul National University, South Korea
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26
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Stokke BT, Draget KI, Smidsrød O, Yuguchi Y, Urakawa H, Kajiwara K. Small-Angle X-ray Scattering and Rheological Characterization of Alginate Gels. 1. Ca−Alginate Gels. Macromolecules 2000. [DOI: 10.1021/ma991559q] [Citation(s) in RCA: 272] [Impact Index Per Article: 10.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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27
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Liu JHY, Brant DA, Kitamura S, Kajiwara K, Mimura M. Equilibrium Spatial Distribution of Aqueous Pullulan: Small-Angle X-ray Scattering and Realistic Computer Modeling. Macromolecules 1999. [DOI: 10.1021/ma990591h] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Jennifer H.-Y. Liu
- Department of Chemistry, University of California, Irvine, California 92697-2025; Department of Biological Resource Chemistry, Kyoto Prefectural University, Shimogamo, Kyoto 606-8522, Japan; and Faculty of Engineering and Design, Kyoto Institiute of Technology, Kyoto 606, Japan
| | - David A. Brant
- Department of Chemistry, University of California, Irvine, California 92697-2025; Department of Biological Resource Chemistry, Kyoto Prefectural University, Shimogamo, Kyoto 606-8522, Japan; and Faculty of Engineering and Design, Kyoto Institiute of Technology, Kyoto 606, Japan
| | - Shinichi Kitamura
- Department of Chemistry, University of California, Irvine, California 92697-2025; Department of Biological Resource Chemistry, Kyoto Prefectural University, Shimogamo, Kyoto 606-8522, Japan; and Faculty of Engineering and Design, Kyoto Institiute of Technology, Kyoto 606, Japan
| | - Kanji Kajiwara
- Department of Chemistry, University of California, Irvine, California 92697-2025; Department of Biological Resource Chemistry, Kyoto Prefectural University, Shimogamo, Kyoto 606-8522, Japan; and Faculty of Engineering and Design, Kyoto Institiute of Technology, Kyoto 606, Japan
| | - Mitsuru Mimura
- Department of Chemistry, University of California, Irvine, California 92697-2025; Department of Biological Resource Chemistry, Kyoto Prefectural University, Shimogamo, Kyoto 606-8522, Japan; and Faculty of Engineering and Design, Kyoto Institiute of Technology, Kyoto 606, Japan
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Abstract
Recently, atomic force microscopy has been used to image a variety of polysaccharides and map their distribution on cell surfaces. The mechanical response of polysaccharides to tensile stress has been investigated in single-molecule force spectroscopy experiments. Small-angle X-ray scattering has provided a probe of polysaccharide structure operating in a size range (2-25 nm) that is intermediate between those accessible using nuclear magnetic resonance and light scattering.
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Affiliation(s)
- D A Brant
- Department of Chemistry, University of California, Irvine, CA 92697-2025, USA.
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Affiliation(s)
- Giuseppe Gattuso
- School of Chemistry, The University of Birmingham, Edgbaston, Birmingham B15 2TT, UK
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Lippens G, Wieruszeski JM, Horvath D, Talaga P, Bohin JP. Slow Dynamics of the Cyclic Osmoregulated Periplasmic Glucan of Ralstonia solanacearum As Revealed by Heteronuclear Relaxation Studies. J Am Chem Soc 1998. [DOI: 10.1021/ja970960u] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- G. Lippens
- Contribution from the CNRS URA 1309, Pasteur Institute of Lille, 1, rue du Professeur Calmette, 59000 Lille, France, and CNRS UMR 111, Université des Sciences et Technologies de Lille, 59655 Villeneuve d'Ascq Cedex, France
| | - J.-M. Wieruszeski
- Contribution from the CNRS URA 1309, Pasteur Institute of Lille, 1, rue du Professeur Calmette, 59000 Lille, France, and CNRS UMR 111, Université des Sciences et Technologies de Lille, 59655 Villeneuve d'Ascq Cedex, France
| | - D. Horvath
- Contribution from the CNRS URA 1309, Pasteur Institute of Lille, 1, rue du Professeur Calmette, 59000 Lille, France, and CNRS UMR 111, Université des Sciences et Technologies de Lille, 59655 Villeneuve d'Ascq Cedex, France
| | - P. Talaga
- Contribution from the CNRS URA 1309, Pasteur Institute of Lille, 1, rue du Professeur Calmette, 59000 Lille, France, and CNRS UMR 111, Université des Sciences et Technologies de Lille, 59655 Villeneuve d'Ascq Cedex, France
| | - J.-P. Bohin
- Contribution from the CNRS URA 1309, Pasteur Institute of Lille, 1, rue du Professeur Calmette, 59000 Lille, France, and CNRS UMR 111, Université des Sciences et Technologies de Lille, 59655 Villeneuve d'Ascq Cedex, France
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