• Reference Citation Analysis
  • v
  • v
  • Find an Article
Find an Article PDF (4672287)   Today's Articles (5599)
For: Yarchuk O, Iost I, Dreyfus M. The relation between translation and mRNA degradation in the lacZ gene. Biochimie 1991;73:1533-41. [PMID: 1725264 DOI: 10.1016/0300-9084(91)90188-7] [Citation(s) in RCA: 36] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Number Cited by Other Article(s)
1
Iost I, Condon C. Marc Dreyfus (1948-2022). Mol Microbiol 2023;119:378-380. [PMID: 36823993 DOI: 10.1111/mmi.15022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2022] [Accepted: 12/24/2022] [Indexed: 12/31/2022]
2
Interaction between Phage T4 Protein RIII and Host Ribosomal Protein S1 Inhibits Endoribonuclease RegB Activation. Int J Mol Sci 2022;23:ijms23169483. [PMID: 36012768 PMCID: PMC9409239 DOI: 10.3390/ijms23169483] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2022] [Revised: 08/16/2022] [Accepted: 08/20/2022] [Indexed: 11/17/2022]  Open
3
Translational coupling via termination-reinitiation in archaea and bacteria. Nat Commun 2019;10:4006. [PMID: 31488843 PMCID: PMC6728339 DOI: 10.1038/s41467-019-11999-9] [Citation(s) in RCA: 46] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2018] [Accepted: 08/12/2019] [Indexed: 11/18/2022]  Open
4
Cifuentes-Goches JC, Hernández-Ancheyta L, Guarneros G, Oviedo N, Hernández-Sánchez J. Domains two and three of Escherichia coli ribosomal S1 protein confers 30S subunits a high affinity for downstream A/U-rich mRNAs. J Biochem 2019;166:29-40. [PMID: 30668774 DOI: 10.1093/jb/mvz006] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2018] [Accepted: 01/14/2019] [Indexed: 11/12/2022]  Open
5
Koscielniak D, Wons E, Wilkowska K, Sektas M. Non-programmed transcriptional frameshifting is common and highly RNA polymerase type-dependent. Microb Cell Fact 2018;17:184. [PMID: 30474557 PMCID: PMC6260861 DOI: 10.1186/s12934-018-1034-4] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2018] [Accepted: 11/19/2018] [Indexed: 12/15/2022]  Open
6
Extensive reshaping of bacterial operons by programmed mRNA decay. PLoS Genet 2018;14:e1007354. [PMID: 29668692 PMCID: PMC5927463 DOI: 10.1371/journal.pgen.1007354] [Citation(s) in RCA: 49] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2018] [Revised: 04/30/2018] [Accepted: 04/04/2018] [Indexed: 12/04/2022]  Open
7
Ludwig P, Huber M, Lehr M, Wegener M, Zerulla K, Lange C, Soppa J. Non-canonical Escherichia coli transcripts lacking a Shine-Dalgarno motif have very different translational efficiencies and do not form a coherent group. MICROBIOLOGY-SGM 2018;164:646-658. [PMID: 29469690 DOI: 10.1099/mic.0.000619] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
8
Abbasian M, Eslampanah Seyedi HA, Sayed Tabatabaei BE, Arab-Bafrani Z, Mofid MR, Zareie R. Recombinant production, purification and characterization of vessel dilator in E. coli. Protein Expr Purif 2016;129:75-83. [PMID: 27664437 DOI: 10.1016/j.pep.2016.09.010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2016] [Revised: 09/10/2016] [Accepted: 09/20/2016] [Indexed: 10/21/2022]
9
Quantitative characterization of gene regulation by Rho dependent transcription termination. BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS 2015;1849:940-54. [DOI: 10.1016/j.bbagrm.2015.05.003] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/02/2014] [Revised: 04/03/2015] [Accepted: 05/07/2015] [Indexed: 11/23/2022]
10
Kreth J, Liu N, Chen Z, Merritt J. RNA regulators of host immunity and pathogen adaptive responses in the oral cavity. Microbes Infect 2015;17:493-504. [PMID: 25790757 PMCID: PMC4485933 DOI: 10.1016/j.micinf.2015.03.003] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2015] [Revised: 03/05/2015] [Accepted: 03/07/2015] [Indexed: 12/15/2022]
11
Mier-y-Terán-Romero L, Silber M, Hatzimanikatis V. Mechanistically consistent reduced models of synthetic gene networks. Biophys J 2013;104:2098-109. [PMID: 23663853 DOI: 10.1016/j.bpj.2013.03.031] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2012] [Revised: 03/06/2013] [Accepted: 03/07/2013] [Indexed: 11/30/2022]  Open
12
Castillo-Méndez MA, Jacinto-Loeza E, Olivares-Trejo JJ, Guarneros-Peña G, Hernández-Sánchez J. Adenine-containing codons enhance protein synthesis by promoting mRNA binding to ribosomal 30S subunits provided that specific tRNAs are not exhausted. Biochimie 2011;94:662-72. [PMID: 21971529 DOI: 10.1016/j.biochi.2011.09.019] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2011] [Accepted: 09/19/2011] [Indexed: 11/26/2022]
13
Wagner EGH. Kill the messenger: bacterial antisense RNA promotes mRNA decay. Nat Struct Mol Biol 2009;16:804-6. [DOI: 10.1038/nsmb0809-804] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
14
Dreyfus M. Killer and protective ribosomes. PROGRESS IN MOLECULAR BIOLOGY AND TRANSLATIONAL SCIENCE 2009;85:423-66. [PMID: 19215779 DOI: 10.1016/s0079-6603(08)00811-8] [Citation(s) in RCA: 52] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
15
Briani F, Curti S, Rossi F, Carzaniga T, Mauri P, Dehò G. Polynucleotide phosphorylase hinders mRNA degradation upon ribosomal protein S1 overexpression in Escherichia coli. RNA (NEW YORK, N.Y.) 2008;14:2417-29. [PMID: 18824515 PMCID: PMC2578868 DOI: 10.1261/rna.1123908] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
16
Davis BM, Waldor MK. RNase E-dependent processing stabilizes MicX, a Vibrio cholerae sRNA. Mol Microbiol 2007;65:373-85. [PMID: 17590231 PMCID: PMC1976385 DOI: 10.1111/j.1365-2958.2007.05796.x] [Citation(s) in RCA: 75] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
17
Yamamoto S, Kutsukake K. FljA-mediated posttranscriptional control of phase 1 flagellin expression in flagellar phase variation of Salmonella enterica serovar Typhimurium. J Bacteriol 2006;188:958-67. [PMID: 16428400 PMCID: PMC1347349 DOI: 10.1128/jb.188.3.958-967.2006] [Citation(s) in RCA: 59] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
18
Truncaite L, Zajanckauskaite A, Arlauskas A, Nivinskas R. Transcription and RNA processing during expression of genes preceding DNA ligase gene 30 in T4-related bacteriophages. Virology 2006;344:378-90. [PMID: 16225899 DOI: 10.1016/j.virol.2005.09.001] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2005] [Revised: 07/01/2005] [Accepted: 09/02/2005] [Indexed: 10/25/2022]
19
Arnold S, Siemann-Herzberg M, Schmid J, Reuss M. Model-based inference of gene expression dynamics from sequence information. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2005;100:89-179. [PMID: 16270657 DOI: 10.1007/b136414] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
20
Afonyushkin T, Večerek B, Moll I, Bläsi U, Kaberdin VR. Both RNase E and RNase III control the stability of sodB mRNA upon translational inhibition by the small regulatory RNA RyhB. Nucleic Acids Res 2005;33:1678-89. [PMID: 15781494 PMCID: PMC1069011 DOI: 10.1093/nar/gki313] [Citation(s) in RCA: 136] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]  Open
21
Condon C. RNA processing and degradation in Bacillus subtilis. Microbiol Mol Biol Rev 2003;67:157-74, table of contents. [PMID: 12794188 PMCID: PMC156466 DOI: 10.1128/mmbr.67.2.157-174.2003] [Citation(s) in RCA: 119] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
22
Baker KE, Mackie GA. Ectopic RNase E sites promote bypass of 5'-end-dependent mRNA decay in Escherichia coli. Mol Microbiol 2003;47:75-88. [PMID: 12492855 DOI: 10.1046/j.1365-2958.2003.03292.x] [Citation(s) in RCA: 91] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
23
Thanbichler M, Böck A. The function of SECIS RNA in translational control of gene expression in Escherichia coli. EMBO J 2002;21:6925-34. [PMID: 12486013 PMCID: PMC139081 DOI: 10.1093/emboj/cdf673] [Citation(s) in RCA: 41] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
24
O'Donnell SM, Janssen GR. The initiation codon affects ribosome binding and translational efficiency in Escherichia coli of cI mRNA with or without the 5' untranslated leader. J Bacteriol 2001;183:1277-83. [PMID: 11157940 PMCID: PMC95001 DOI: 10.1128/jb.183.4.1277-1283.2001] [Citation(s) in RCA: 71] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2000] [Accepted: 11/17/2000] [Indexed: 11/20/2022]  Open
25
Vytvytska O, Moll I, Kaberdin VR, von Gabain A, Bläsi U. Hfq (HF1) stimulates ompA mRNA decay by interfering with ribosome binding. Genes Dev 2000. [DOI: 10.1101/gad.14.9.1109] [Citation(s) in RCA: 69] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
26
Grunberg-Manago M. Messenger RNA stability and its role in control of gene expression in bacteria and phages. Annu Rev Genet 2000;33:193-227. [PMID: 10690408 DOI: 10.1146/annurev.genet.33.1.193] [Citation(s) in RCA: 237] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
27
Martin-Farmer J, Janssen GR. A downstream CA repeat sequence increases translation from leadered and unleadered mRNA in Escherichia coli. Mol Microbiol 1999;31:1025-38. [PMID: 10096072 DOI: 10.1046/j.1365-2958.1999.01228.x] [Citation(s) in RCA: 60] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
28
Joyce SA, Dreyfus M. In the absence of translation, RNase E can bypass 5' mRNA stabilizers in Escherichia coli. J Mol Biol 1998;282:241-54. [PMID: 9735284 DOI: 10.1006/jmbi.1998.2027] [Citation(s) in RCA: 58] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
29
Braun F, Le Derout J, Régnier P. Ribosomes inhibit an RNase E cleavage which induces the decay of the rpsO mRNA of Escherichia coli. EMBO J 1998;17:4790-7. [PMID: 9707438 PMCID: PMC1170808 DOI: 10.1093/emboj/17.16.4790] [Citation(s) in RCA: 83] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]  Open
30
Lopez PJ, Marchand I, Yarchuk O, Dreyfus M. Translation inhibitors stabilize Escherichia coli mRNAs independently of ribosome protection. Proc Natl Acad Sci U S A 1998;95:6067-72. [PMID: 9600918 PMCID: PMC27586 DOI: 10.1073/pnas.95.11.6067] [Citation(s) in RCA: 46] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]  Open
31
Lopez PJ, Dreyfus M. The lacZ mRNA can be stabilised by the T7 late mRNA leader in E coli. Biochimie 1996;78:408-15. [PMID: 8915530 DOI: 10.1016/0300-9084(96)84747-x] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
32
Blumenthal RM, Borst DW, Matthews RG. Experimental analysis of global gene regulation in Escherichia coli. PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY 1996;55:1-86. [PMID: 8787606 DOI: 10.1016/s0079-6603(08)60189-0] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
33
Nierlich DP, Murakawa GJ. The decay of bacterial messenger RNA. PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY 1996;52:153-216. [PMID: 8821261 DOI: 10.1016/s0079-6603(08)60967-8] [Citation(s) in RCA: 59] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
34
Iost I, Dreyfus M. mRNAs can be stabilized by DEAD-box proteins. Nature 1994;372:193-6. [PMID: 7526223 DOI: 10.1038/372193a0] [Citation(s) in RCA: 97] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
35
Jain C, Kleckner N. IS10 mRNA stability and steady state levels in Escherichia coli: indirect effects of translation and role of rne function. Mol Microbiol 1993;9:233-47. [PMID: 7692216 DOI: 10.1111/j.1365-2958.1993.tb01686.x] [Citation(s) in RCA: 36] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
36
Yarchuk O, Jacques N, Guillerez J, Dreyfus M. Interdependence of translation, transcription and mRNA degradation in the lacZ gene. J Mol Biol 1992;226:581-96. [PMID: 1507217 DOI: 10.1016/0022-2836(92)90617-s] [Citation(s) in RCA: 143] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
PrevPage 1 of 1 1Next
© 2004-2025 Baishideng Publishing Group Inc. All rights reserved. 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA