Forever young: The successful story of a marine biotic index

Submarine outfall and new sewage treatment plant modulate the response of intertidal benthic communities in a SW Atlantic area

Spatio-temporal responses of the intertidal macrobenthic community to the effects of a submarine outfall (SO) and a new sewage treatment plant (EDAR) were evaluated, analyzing changes in macrofaunal assemblages and community structure. Study was conducted in a SW Atlantic coastal area in 4 stages: BSO (Before the SO), Du (During the construction of the SO), ASO (After the SO start-up) and AEDAR (After the treatment plant start-up). Boccardia proboscidea and Brachidontes rodriguezii contributed most to the differences between all stages at the site nearest to the discharge point. Number of individuals was highest at BSO and Du. Richness and diversity were lowest at the BSO and highest at the Du. Furthermore, the richness decreased slightly, and the diversity increased at AEDAR. Evenness was highest at the BSO and AEDAR. The nestedness was the dominant process driving the differences between the BSO stage community and the rest of the stages. SO affects the composition and structure of the intertidal macrobenthic community near the outfall area, as organic matter discharge further offshore favour the development of a more diverse intertidal community, including species sensitive to organic enrichment.

Benthic fauna in the south-eastern part of the Pechora-sea: Current state and analysis of ecological quality

In recent decades, economic activity has sharply increased in the Pechora Sea, one of the most hydrologically unique areas of the Barents Sea. Hence, the information about the current state of its ecosystems is quite important for assessing their possible changes in the future. The aim of the present study was to analyze the distribution of macrobenthos and assess its ecological quality in the southeastern part of the Pechora Sea at the beginning of the 21st century (based on data collected in 2012-2013). The results showed that since 1920s there have been no serious changes in the macrobenthos in the studied area. The weak shifts detected in the benthic fauna were either within the natural range of fluctuations in population of common species, or may be associated with differences in the methodological approaches of different researches. Heterogeneity in the macrobenthos distribution, the most significant abiotic factors identified in relation to it, quantitative indicators of biota, and species dominating in communities were similar to those revealed in previous studies. As of 2013, the characteristics of benthic communities in the southeastern part of the Pechora Sea, including their ecological quality, allow us to refer them as undisturbed biosystems.

Evaluating the effectiveness of M-AMBI with other biotic indexes in a temperate estuary

Need for a scalable and widely applicable index has been increasingly important. This study evaluates the applicability of the M-AMBI, a potential comprehensive index, at small spatial scales. M-AMBI was compared to regional indices (EMAP-E and GOM B-IBI), assessing response to natural environmental gradients and low oxygen stress. Results indicate poor agreement between indices with M-AMBI and GOM B-IBI showing positive correlation but significant disagreement in habitat condition. EMAP-E had no agreement. Indices showed similar patterns of better habitat scores in higher salinities. M-AMBI also showed a negative relationship with sediment organic matter and total nitrogen. DO influenced all indices with M-AMBI the most sensitive. However, mismatches between DO and index score were observed further calibration may be needed before adoption into programs. Overall, the M-AMBI demonstrates potential at smaller, local scales, but additional studies are needed to validate its performance in different coastal environments and under different conditions.

Assessing the ecological quality status of macrobenthic communities in a marine terminal of liquefied natural gas in Peru

Macrobenthic organisms are useful bioindicators to assess ecological quality status. On the south-central coast of Peru (13°15.15'S, 76°18.5'W), a Liquefied Natural Gas (LNG) marine terminal has been operating since 2010. We investigated the macrobenthic communities and sediment parameters from 2011 to 2020 to evaluate the ecological quality status in the surrounding area of the marine terminal, using the AZTI Marine Biotic Index (AMBI) and its multivariate version (M-AMBI). We analyzed the diversity and community composition of macrobenthic invertebrates and the physico-chemical parameters of the sediment from 29 sampling sites, ranging from 0 to 15m depth. The sampling design considered: the direct influence zone ("DIZ", surroundings of the marine terminal), and northern (NCZ) and southern (SCZ) control zones. Our results indicated that abundance was high at SCZ and decreased with depth. Species richness and diversity were high at DIZ and NCZ, respectively, and increased up to 10m but dropped at 15m. High sand content was recorded in shallow depths, while in deeper areas and DIZ, mud and organic matter increased and redox potential was negative. AMBI indicated a "slightly disturbed" status in general, while M-AMBI indicated "good" or "moderate" status at depths ≤ 12m, and "poor" status at 15m. Overall, the season/year factor was not important, and variables were mostly significantly different across depths. Redox potential and organic matter were correlated with M-AMBI at 15m. In general, our results indicate an acceptable ecological quality surrounding the marine terminal, likely because the study area is not influenced by an important input of an anthropogenic stressor. This study highlights the importance of monitoring benthic communities in the surroundings of human-made structures and the use of ecological quality indices for understanding potential impacts.

Are genomic indices effective alternatives to morphology based benthic indices in biomonitoring studies? Perspectives from a major harbour and marine protected area

Ecological assessments are currently being conducted by traditional morpho-taxonomical identification techniques that are time-consuming and often inaccurate. Biomonitoring programs are increasingly being complemented by the more rapid and efficient DNA barcoding approach. We compared the congruency of morpho-taxonomic (AMBI - AZTI's Marine Biotic Index) and genomic (gAMBI) benthic indices in ecological quality status (EcoQS) assignation in Mumbai harbour and Malvan Marine Protected area (MPA). The study, first of its kind to adopt the gAMBI tool in the selected milieu, contributed substantial number of macrobenthic cytochrome c oxidase subunit I gene (COI) sequences that were previously unavailable in the reference library, adding sufficient genetic resources for establishing ecostatus. AMBI and gAMBI values based on presence/absence data related significantly with those derived from abundance data matrices. Taxonomic and genomic indices derived ecostatus corresponded sufficiently well despite minor discrepancies, underscoring the viability of gAMBI as a superior alternative to AMBI in monitoring studies.

The efficacy of benthic indices to evaluate the ecological quality and urbanization effects on sandy beach ecosystems

Benthic indices have been widely used across different coastal ecosystems to assess ecological quality and detect anthropic impacts, but very few studies investigated their effectiveness on sandy beaches. Here, we evaluated and compared the efficacy of 12 assemblage-based benthic indices in assessing ecological quality in beaches, across a gradient of anthropic pressure and natural variability in 90 sandy beach sites. Overall, when sandy beaches were considered collectively, benthic indices had a poor performance in identifying decreases in ecological quality with increasing urbanization. However, when each morphodynamic type was evaluated separately, a few indices, especially those that were calibrated by reference conditions (i.e., M-AMBI, BAT, and BEQI-2), showed promising results for dissipative, and to a lesser extent, intermediate beaches. For reflective beaches, indices performed poorly, likely a reflection of the stronger natural disturbance these beaches are subjected to. Among functional indices, richness was found to be lower in urbanized beaches, but only in dissipative ones. Overall, our results show that benthic indices have the potential to be incorporated in sandy beach management and monitoring programs, especially for dissipative and intermediate beaches. For reflective beaches, given the early stage of studies with benthic indices in beaches, more research is needed to corroborate the observed patterns.

Effects of PAHs on meiofauna from three estuaries with different levels of urbanization in the South Atlantic

Estuarine environments are suggested to be the final receivers of human pollution and are impacted by surrounding urbanization and compounds carried by the river waters that flow from the continent. Polycyclic aromatic hydrocarbons (PAHs) are among the contaminants that can reach estuaries and can directly affect marine conservation, being considered highly deleterious to organisms living in these environments. This research investigated the meiofauna of three estuaries exposed to different levels of urbanization and consequently different levels of PAH concentrations, in order to assess how these compounds and environmental factors affect the distribution, structure and diversity of these interstitial invertebrates. A total of 15 major meiofauna groups were identified, with Nematoda being the dominant taxon (74.64%), followed by Copepoda (9.55%) and Polychaeta (8.56%). It was possible to observe significant differences in all diversity indices studied in the estuaries. With the exception of average density, the diversity indices (richness, Shannon index and evenness) were higher in the reference estuary, Goiana estuarine system (GES). On the other hand, the Timbó estuarine system (TES) had the lowest Shannon index value and richness, while the Capibaribe estuarine system (CES) had the lowest evenness value. The latter two estuaries (TES and CES) presented intermediate and high levels of urbanization, respectively. The ecological quality assessment (EcoQ) in the studied estuaries was classified from Poor to Moderate and the estuary with the lowest demographic density in its surroundings, GES, showed a better ecological quality (Moderate EcoQ). A significant distance-based multivariate linear modelling regression (DistLM) was observed between the environmental variables and the density of the meiobenthic community, where PAHs and pH were the main contributors to organism variation. The sediments were characterized by predominance of very fine sand and silt-clay in the most polluted environments, while the control site environment (GES) was dominated by medium grains. The highest concentrations of PAHs were found in the most urbanized estuaries, and directly affected the structure of the interstitial benthic community. The metrics used in the present study proved to be adequate for assessing the environmental quality of the investigated estuaries.

Pollution has negative effects on macrozoobenthic trait diversity in a large subtropical estuary

Changes in species composition and relative abundance caused by pollution might have an impact on the community dynamics and ecosystem functioning. Macrobenthos are widely used as indicators of marine environmental health due to their sensitive to disturbance. The present study aims to evaluate spatial and temporal variability of functional diversity of macrobenthos of the Montevideo and Canelones coastal zone along a pre-established pollution gradient, based on Biological Traits Analysis, and functional diversity indices. Body-size", "Feeding-mode", "Habitat", and "Indicator-role" were useful proxies to detect changes in environmental conditions in organically enriched habitats. FRic, FEve and FDis detected temporal variations but only FRic registered spatial variations. Differences among surveys would mainly reflect environmental variability caused by the 2009-2010 El Niño-Southern Oscillation event. Finally, negative correlations between FEve and FDis with AMBI suggest both indices as useful proxies of benthic environmental health, with potential to be used in monitoring and quality assessment programs.

Inclusion of condition in natural capital assessments is critical to the implementation of marine nature-based solutions

Current approaches to measure ecosystem services (ES) within natural capital (NC) and nature-based solutions (NbS) assessments are generally coarse, often using a single figure for ecosystem services (e.g., nutrient remediation or blue carbon sequestration) applied to the local or national habitat stock, which fails to take account of local ecosystem conditions and regional variability. As such, there is a need for improved understanding of the link between habitat condition and ES provision, using comparable indicators in order to take more informed management decisions. Here the UK, Solent Marine Sites (SEMS) is used as a case study system to demonstrate how Water Framework Directive (WFD) 'ecological status' and other indicators of ecosystem condition (state or quality) can be coupled with habitat extent information to deliver a more precise locally-tailored NC approach for active coastal and marine habitat restoration. Habitat extent and condition data are collected for seven NbS relevant coastal habitats (littoral sediment, mat-forming green macroalgae, subtidal sediment, saltmarsh, seagrass, reedbeds and native oyster beds). The workflow includes: 1) biophysical assessment of regulatory ES; 2) monetary valuation; and 3) compilation of future scenarios of habitat restoration and creation. The results indicate that incorporating classifications by condition indices into local NC extent accounts improved ES benefits by 11-67%. This suggests that omitting condition from NC assessments could lead to undervaluation of ES benefits. Future scenarios of restoration in the SEMS also show that the additional regulatory benefits of reaching 'Good' ecological status are £376 million annually, but could be as much as £1.218 billion if 'High'status and all habitat creation targets were met. This evidence of the potential value of restoration and importance of including condition indices in assessments is highly relevant to consider when investing in water ecosystems conservation and restoration as called for by the UN Decade on Ecosystem Restoration (2021-2030), and more generally in global nutrient neutrality and blue carbon policy strategies.

Assessing the benthic quality status of three fine sand tropical beaches from the Andaman Islands through the application of marine biotic indices

The rapid coastal development in the Andaman Islands has resulted in littoral habitat degradation. Understanding the performances of marine biotic indices and the interpretation and translation of those results into coastal health assessment could become an integral tool in future monitoring and management policies. In this line of efforts, the ecological quality status of three sandy beaches, two urban and one nonurban, was evaluated by using three marine biotic indices. The faunal community belonged to moderately well-sorted fine sand biocenosis. The relatively high species richness (15.9 ± 0.80 taxa sample^-1) and moderate abundance (563 ± 38.8 ind.m^-2) were features of the benthic fauna. The urban beaches (Aberdeen Bay and Carbyn's Cove) corresponded to tolerant benthic communities. Malacoceros indicus, Grandidierella megnae and Scolelepis squamata (tolerant species), and Ampelisca diadema (indifferent species) were the major constituents of urban beaches, while Scoloplos capensis, Urothoe grimaldii, and Urothoe platydactyla (sensitive species) were important at the nonurban beach (Wandoor). The high-good quality status prevailed across the spatial and temporal scales except for Carbyn's cove beach, where good-poor status was noticed. The M-AMBI appeared to be the most robust measure in distinguishing the impact between the urban and nonurban beaches. The constrained ordinations revealed a gradient of disturbance across the beaches. The distinct patterns of sample segregation were the result of the ecological response. This attempt should be considered a comprehensive measure of quality assessment of beaches under human pressure and draw a parallel line of evidence to global studies on sandy beaches.

Ecological quality status assessment of tropical estuaries with benthic indices using differently derived reference conditions

Setting appropriate reference conditions (RCs) is critical for classifying the Ecological Quality Status (EcoQS) which is extremely challenging, considering the present-day estuaries. The EcoQS of three tropical estuaries was assessed by applying five different RCs to identify the best applicable method for the area. The AZTI's indices (AMBI and M-AMBI) categorised areas with sharper pollution gradient with ease, while classification of moderate-low polluted areas was ambiguous. Indices responded to chemical stressors more clearly in the impacted estuary compared to the less polluted estuaries. Ecological status assigned by the default RC (lowest AMBI and highest diversity and richness values) were more accurate than those obtained on application of other four types of RCs, owing to various estuarine constraints that are discussed herewith. Thus, prior to application, caution should be exercised while setting area-specific RCs. The inclusion of combination of AZTI's indices with professional judgment for successful appraisal of ecosystem is recommended.

Responses of the benthic environment to reduction in anthropogenic nutrient loading in the Seto Inland Sea (Japan), based on M-AMBI assessment

Deterioration of the sediment environment and benthic ecosystem is an undesirable effect of eutrophication, but little is known about the response of macrobenthic communities to eutrophication and their long-term recovery. In the present study, temporal changes in benthic ecological status, associated with reductions in anthropogenic impacts on a largest semi-enclosed sea in Japan, were determined using long-term monitoring data from water and sediment quality based on the multivariate AZTI Marine Biotic Index (M-AMBI), focusing on spatial differences in anthropogenic impacts. Several sub-areas were classified based on Chlorophyll a (Chl.a) concentrations in surface water during the 1980s. Chl.a concentrations decreased in all sub-areas except the sub-area with <2 μg Chl.a L^-1 from the 1990s-2010s. On the other hand, total organic carbon contents in sediment decreased and M-AMBI values increased in all sub-areas during this period may be due to reduced lateral organic matter advection from surrounding areas.

Responses of the macrobenthic community to the Dalian Bay oil spill based on co-occurrence patterns and interaction networks

On July 16, 2010, a pipeline explosion spilled 1500 tons of crude oil into the Port of Dalian, China. To identify taxa responses to the spill, we exploited seven years of monitoring data to examine the co-occurrence of taxon pairs and the variation of the macrobenthic community. Non-parametric correlation analysis was used to construct interaction networks of relationships between oil spill contaminants and macrobenthic taxa. We observed that the impacted macrobenthic community not restored before 2016. The tolerance/sensitivity of taxa was inconsistent with the studies of oil impacts in other locations. We suggest revision of the ecological group classification of Sabellidae, Lumbrineridae, Terebellidae, Sternaspidae, and Spionidae. The variation in the frequency of coexistence indicates the potential impact of oil spill pollution on resource occupation. The interaction network involving macrobenthic families and stressors associated with the oil spill highlights how different macrobenthic families respond to different combinations of stressors.

Building on gAMBI in ports for a challenging biological invasions scenario: Blue-gNIS as a proof of concept

The status of aquatic ecosystems has historically been monitored by the use of biotic indices. However, few biotic measures consider the presence of non-indigenous species as a sign of anthropogenic pollution and habitat disturbance even when this may seriously affect the metric scores and ecological status classifications of an environment. Today, biological invasions are currently one of the greatest threats to biodiversity and sustainable blue economies around the world. In this work, environmental assessments were conducted in the Port of Gijon, Northern Spain, using eDNA metabarcoding, and the gAMBI (genetics based AZTI Marine Biotic Index) was estimated. Results indicate a high/good ecological status within the port. However, nine non-indigenous species and five invasive species were found, and a modification of the gAMBI that includes species invasiveness was proposed: Blue-gNIS. The index was preliminary tested against existing validated indices such as gAMBI, BENTIX (based on the ecology of macroinvertebrates) and ALEX (based on the invasiveness of the species). Blue-gNIS classified the port in a good ecological status and showed its potential usefulness to achieve more complete water quality assessments of ports.

Response of macrobenthic communities to heavy metal pollution in Laoshan Bay, China: A trait-based method

The effects of multiple natural and anthropogenic stressors on the functional trait composition and diversity of marine macrobenthic communities in Laoshan Bay were investigated using biological trait analysis (BTA). Seven traits, including 27 trait modalities and four functional diversity indices (functional richness, functional evenness, functional divergence, and Rao's quadratic entropy), were considered. The results of RLQ (environmental variables (R), species taxa (L), and traits (Q)) and variance partitioning analysis (VPA) showed that the trait compositions and functional diversity of macrobenthic communities were influenced by a combination of stressors, among which heavy metals were the major factors. At the sites with high heavy metal pollution, the prevalent traits were infauna, burrower, and deposit feeder, whereas epifauna, carnivores and crawlers were dominant at the sites of low heavy metal contamination. The impact of natural environmental gradients on macrobenthic communities is also worthy of attention.

A baseline quantitative assessment of deep-sea benthic fauna of the Gulf of Aqaba (Northern Saudi Arabia, Red Sea)

The Gulf of Aqaba (hereafter 'the Gulf') is a narrow, semi-enclosed, warm, high saline, and oligotrophic water body. This baseline study provides the first quantitative data on deep-sea (207-1281 m depth) benthos of the Gulf. Fifty-five benthic species (predominantly polychaetes) with a density of 160-670 ind. m^-2, species richness of 11-25, and Shannon-Wiener diversity (H') of 3.14-4.17 bits. ind.^-1 were recorded from nine stations. The density and H' of benthos of the Gulf are comparable with those of the Red Sea, while both are lower than those reported from the Arabian Sea and the Mediterranean Sea. The good-high ecological status of benthic communities indicates the absence of major stress in the deep-sea habitats of the Gulf. As large-scale urbanization is proposed in the Saudi coastal areas of the Gulf, this study is expected to provide a baseline dataset for future environmental impact assessments.

Indicative value of benthic foraminifera for biomonitoring: Assignment to ecological groups of sensitivity to total organic carbon of species from European intertidal areas and transitional waters

This work contributes to the ongoing work aiming at confirming benthic foraminifera as a biological quality element. In this study, benthic foraminifera from intertidal and transitional waters from the English Channel/European Atlantic coast and the Mediterranean Sea were assigned to five ecological groups using the weighted-averaging optimum with respect to TOC of each species. It was however not possible to assign typical salt marsh species due to the presence of labile and refractory organic matter that hampers TOC characterization. Tests of this study species' lists with Foram-AMBI on two independent datasets showed a significant correlation between Foram-AMBI and TOC, confirming the strong relation between foraminifera and TOC. For one of the validation datasets, associated macrofaunal data were available and a significant correlation was found between the foraminiferal Foram-AMBI and the macrofaunal AMBI. The here proposed lists should be further tested with sensitivity-based indices in different European regional settings.

European aquatic ecological assessment methods: A critical review of their sensitivity to key pressures

The European Union has embarked on a policy which aims to achieve good ecological status in all surface waters (i.e. rivers, lakes, transitional and coastal waters). In theory, ecological status assessment methods should address the effects of all relevant human pressures. In this study, we analyze the degree to which methods European countries use to assess ecological status tackle various pressures affecting European waters. Nutrient pollution is by far the best-covered pressure for all four water categories. Out of total of 423 assessment methods, 370 assess eutrophication and pressure-specific relationships have been demonstrated for 212 of these. "General degradation" is addressed by 238 methods, mostly validated by relationships to combined pressure indices. Other major pressures have received significantly less effort: hydromorphological degradation is assessed by 160 methods and pressure-specific relationships have been demonstrated for just 40 of these. Hydromorphological pressures are addressed (at least by one BQE) only by 25% countries for coastal waters and 70-80% for lakes and transitional waters. Specific diagnostic tools (i.e. single-pressure relationships) for hydromorphology have only been developed by a few countries: only 20% countries have such methods for lakes, coastal and transitional waters and less than half for rivers. Toxic contamination is addressed by 90 methods; however, pressure-specific relationships have been demonstrated for just eight of these. Only two countries have demonstrated pressure-specific acidification methods for rivers, and three for lakes. In summary, methods currently in use mostly address eutrophication and/or general degradation, but there is not much evidence that they reliably pick up the effects of other significant pressures such as hydromorphology or toxic contamination. Therefore, we recommend that countries re-examine: (1) those pressures which affect different water categories in the country; (2) relevant assessment methods to tackle those pressures; (3) whether pressure-response relationships have been developed for each of these.

A revised classification system describing the ecological quality status of organically enriched marine sediments based on total dissolved sulfides

A field study is presented that provides an alternative method and system for classifying the ecological quality status (EQS) of organically enriched marine sediments based on total free sulfide concentrations (S^2-). Sediments collected adjacent to coastal aquaculture activities across a broad biogeographic range were analysed using three S^2- methods. S^2- is a product of organic matter mineralization and is a major cause of benthic community impacts from excess organic enrichment. The results confirm that the ion-selective electrode protocol that is widely used in monitoring programs to classify benthic impacts provides unreliable data and site classifications. An EQS classification system is presented that employs S^2- data measured rapidly and simply in the field by direct ultraviolet spectrophotometry. Interrelations between S^2- concentrations and several benthic macrofauna community health metrics were employed to develop the EQS system. These relationships were consistent regardless of organic matter source, geographic region or sediment grain size.