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Abstract
The viscoelastic properties of cells are responsible for the adhesion process to different surfaces and for cell motility. Therefore, it is very important to develop specific, label-free biosensors with the use of whole cells to study the effect of various factors on the survival and properties of selected type of normal and pathological cells. The quartz crystal microbalance with dissipation energy monitoring (QCM-D) is a technique which enables to track these changes in cells during real-time experiments. One of the applied procedures of the evaluation of the cells' viscoelastic changes is based on the investigations of interactions between specific, different glycans, present on the surface of the primary tumor and its metastases with specific lectins. Two procedures have been developed to detect the differences in the cellular glycosylation profile using cell-based sensors (adherent cells cultured on sensors) and suspension cell-based sensors (adherent cells mechanically detached and inserted into the QCM-D chamber with a sensor). Furthermore, in this work some cell-based sensor regeneration protocols have been described and a lectin-ELISA assay with a fluorescently labeled lectin, thus enabling a qualitative and quantitative tracking of each step of the lectin-glycan binding and unbinding process performed on whole cells.
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Affiliation(s)
- Anna Sobiepanek
- Laboratory of Biomolecular Interactions Studies, Chair of Drug and Cosmetics Biotechnology, Faculty of Chemistry, Warsaw University of Technology, Warsaw, Poland.
| | - Tomasz Kobiela
- Laboratory of Biomolecular Interactions Studies, Chair of Drug and Cosmetics Biotechnology, Faculty of Chemistry, Warsaw University of Technology, Warsaw, Poland.
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2
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Ganguly A, Lin KC, Muthukumar S, Nagaraj VJ, Prasad S. Label-Free Protein Glycosylation Analysis Using NanoMonitor-An Ultrasensitive Electrochemical Biosensor. Curr Protoc 2021; 1:e150. [PMID: 34101384 DOI: 10.1002/cpz1.150] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Glycans (oligosaccharide chains attached to glycoproteins) are a promising class of biomarkers, found in body fluids such as serum, saliva, urine, etc., that can be used for the diagnosis of disease conditions. Subtle changes in glycans resulting from altered glycosylation machinery have been reported during various diseases, including carcinogenesis. In this article, we detail protocols for the rapid, label-free analysis of glycans using a previously developed highly sensitive and selective electrochemical impedance spectroscopy-based biosensing diagnostic platform called "NanoMonitor." The glycosensor operation is based on the specific affinity capture of the target glycans on the sensor surface by glycan-binding proteins known as lectins. This glycan-lectin binding activity modulates the impedance of the electrical double layer at the buffer-electrode interface. Protocols for the preparation of glycoprotein samples and glycosylation analysis using NanoMonitor and lectin-based ELISA are described here. The data obtained using these protocols show that NanoMonitor is capable of distinguishing between glycoform variants of the glycoprotein fetuin and glycoproteins derived from cultured human pancreatic cancer cells with high sensitivity (orders of magnitude higher than lectin-based ELISA) and selectivity. The results obtained indicate that NanoMonitor protocols can be further developed to enable use of NanoMonitor as a handheld electronic biosensor device for routine multiplexed detection of glycan biomarkers from clinical samples. © 2021 Wiley Periodicals LLC. Basic Protocol 1: Preparing the NanoMonitor surface for glycan biosensing Support Protocol: Synthesis of glycoform variants of fetuin Basic Protocol 2: Performing Electrochemical Impedance Spectroscopy (EIS) for analyzing glycoprotein structures.
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Affiliation(s)
- Antra Ganguly
- Biomedical Microdevices and Nanotechnology Laboratory, Department of Bioengineering, University of Texas at Dallas, Richardson, Texas
| | - Kai-Chun Lin
- Biomedical Microdevices and Nanotechnology Laboratory, Department of Bioengineering, University of Texas at Dallas, Richardson, Texas
| | | | - Vinay J Nagaraj
- Biomedical Microdevices and Nanotechnology Laboratory, Department of Bioengineering, University of Texas at Dallas, Richardson, Texas
| | - Shalini Prasad
- Biomedical Microdevices and Nanotechnology Laboratory, Department of Bioengineering, University of Texas at Dallas, Richardson, Texas
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3
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Sobiepanek A, Paone A, Cutruzzolà F, Kobiela T. Biophysical characterization of melanoma cell phenotype markers during metastatic progression. EUROPEAN BIOPHYSICS JOURNAL : EBJ 2021; 50:523-542. [PMID: 33730175 PMCID: PMC8190004 DOI: 10.1007/s00249-021-01514-8] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Revised: 01/30/2021] [Accepted: 03/08/2021] [Indexed: 12/14/2022]
Abstract
Melanoma is the most fatal form of skin cancer, with increasing prevalence worldwide. The most common melanoma genetic driver is mutation of the proto-oncogene serine/threonine kinase BRAF; thus, the inhibition of its MAP kinase pathway by specific inhibitors is a commonly applied therapy. However, many patients are resistant, or develop resistance to this type of monotherapy, and therefore combined therapies which target other signaling pathways through various molecular mechanisms are required. A possible strategy may involve targeting cellular energy metabolism, which has been recognized as crucial for cancer development and progression and which connects through glycolysis to cell surface glycan biosynthetic pathways. Protein glycosylation is a hallmark of more than 50% of the human proteome and it has been recognized that altered glycosylation occurs during the metastatic progression of melanoma cells which, in turn facilitates their migration. This review provides a description of recent advances in the search for factors able to remodel cell metabolism between glycolysis and oxidative phosphorylation, and of changes in specific markers and in the biophysical properties of cells during melanoma development from a nevus to metastasis. This development is accompanied by changes in the expression of surface glycans, with corresponding changes in ligand-receptor affinity, giving rise to structural features and viscoelastic parameters particularly well suited to study by label-free biophysical methods.
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Affiliation(s)
- Anna Sobiepanek
- Laboratory of Biomolecular Interactions Studies, Chair of Drug and Cosmetics Biotechnology, Faculty of Chemistry, Warsaw University of Technology, Noakowskiego 3, 00-664, Warsaw, Poland.
| | - Alessio Paone
- Department of Biochemical Sciences "A. Rossi Fanelli", Sapienza University of Rome, Rome, Italy
| | - Francesca Cutruzzolà
- Department of Biochemical Sciences "A. Rossi Fanelli", Sapienza University of Rome, Rome, Italy
| | - Tomasz Kobiela
- Laboratory of Biomolecular Interactions Studies, Chair of Drug and Cosmetics Biotechnology, Faculty of Chemistry, Warsaw University of Technology, Noakowskiego 3, 00-664, Warsaw, Poland
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4
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Qin X, Zhang Z, Shao H, Zhang R, Chen L, Yang X. Boronate affinity material-based sensors for recognition and detection of glycoproteins. Analyst 2020; 145:7511-7527. [DOI: 10.1039/d0an01410a] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
This review comprehensively presents the current overview and development potential of BAMs-based sensors for glycoprotein recognition and detection.
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Affiliation(s)
- Xiaoxiao Qin
- Shaanxi Engineering Laboratory for Food Green Processing and Safety Control
- College of Food Engineering and Nutritional Science
- Shaanxi Normal University
- Xi'an
- P.R. China
| | - Zhong Zhang
- Shaanxi Engineering Laboratory for Food Green Processing and Safety Control
- College of Food Engineering and Nutritional Science
- Shaanxi Normal University
- Xi'an
- P.R. China
| | - Hongjun Shao
- Shaanxi Engineering Laboratory for Food Green Processing and Safety Control
- College of Food Engineering and Nutritional Science
- Shaanxi Normal University
- Xi'an
- P.R. China
| | - Runguang Zhang
- Shaanxi Engineering Laboratory for Food Green Processing and Safety Control
- College of Food Engineering and Nutritional Science
- Shaanxi Normal University
- Xi'an
- P.R. China
| | - Lingxin Chen
- Key Laboratory of Coastal Environmental Processes and Ecological Remediation; Research Centre for Coastal Environmental Engineering and Technology
- Yantai Institute of Coastal Zone Research
- Chinese Academy of Sciences
- Yantai 264003
- China
| | - Xingbin Yang
- Shaanxi Engineering Laboratory for Food Green Processing and Safety Control
- College of Food Engineering and Nutritional Science
- Shaanxi Normal University
- Xi'an
- P.R. China
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5
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Research and Application of Glycoprotein Sensors Based on Glycosyl Recognition. CHINESE JOURNAL OF ANALYTICAL CHEMISTRY 2019. [DOI: 10.1016/s1872-2040(19)61185-0] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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6
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Schuster B. S-Layer Protein-Based Biosensors. BIOSENSORS 2018; 8:E40. [PMID: 29641511 PMCID: PMC6023001 DOI: 10.3390/bios8020040] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/09/2018] [Revised: 04/05/2018] [Accepted: 04/09/2018] [Indexed: 01/14/2023]
Abstract
The present paper highlights the application of bacterial surface (S-) layer proteins as versatile components for the fabrication of biosensors. One technologically relevant feature of S-layer proteins is their ability to self-assemble on many surfaces and interfaces to form a crystalline two-dimensional (2D) protein lattice. The S-layer lattice on the surface of a biosensor becomes part of the interface architecture linking the bioreceptor to the transducer interface, which may cause signal amplification. The S-layer lattice as ultrathin, highly porous structure with functional groups in a well-defined special distribution and orientation and an overall anti-fouling characteristics can significantly raise the limit in terms of variety and the ease of bioreceptor immobilization, compactness of bioreceptor molecule arrangement, sensitivity, specificity, and detection limit for many types of biosensors. The present paper discusses and summarizes examples for the successful implementation of S-layer lattices on biosensor surfaces in order to give a comprehensive overview on the application potential of these bioinspired S-layer protein-based biosensors.
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Affiliation(s)
- Bernhard Schuster
- Institute for Synthetic Bioarchitectures, Department of NanoBiotechnology, University of Natural Resources and Life Sciences, Vienna, Muthgasse 11, 1190 Vienna, Austria.
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A Quartz Crystal Microbalance Immunosensor for Stem Cell Selection and Extraction. SENSORS 2017; 17:s17122747. [PMID: 29182568 PMCID: PMC5751627 DOI: 10.3390/s17122747] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/23/2017] [Revised: 11/21/2017] [Accepted: 11/24/2017] [Indexed: 02/07/2023]
Abstract
A cost-effective immunosensor for the detection and isolation of dental pulp stem cells (DPSCs) based on a quartz crystal microbalance (QCM) has been developed. The recognition mechanism relies on anti-CD34 antibodies, DPSC-specific monoclonal antibodies that are anchored on the surface of the quartz crystals. Due to its high specificity, real time detection, and low cost, the proposed technology has a promising potential in the field of cell biology, for the simultaneous detection and sorting of stem cells from heterogeneous cell samples. The QCM surface was properly tailored through a biotinylated self-assembled monolayer (SAM). The biotin–avidin interaction was used to immobilize the biotinylated anti-CD34 antibody on the gold-coated quartz crystal. After antibody immobilization, a cellular pellet, with a mixed cell population, was analyzed; the results indicated that the developed QCM immunosensor is highly specific, being able to detect and sort only CD34+ cells. Our study suggests that the proposed technology can detect and efficiently sort any kind of cell from samples with high complexity, being simple, selective, and providing for more convenient and time-saving operations.
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Brosel-Oliu S, Galyamin D, Abramova N, Muñoz-Pascual FX, Bratov A. Impedimetric label-free sensor for specific bacteria endotoxin detection by surface charge registration. Electrochim Acta 2017. [DOI: 10.1016/j.electacta.2017.05.060] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
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9
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Pesquero NC, Carvalho FC, Faria RC, Roque-Barreira MC, Bueno PR. ArtinM Binding Effinities and Kinetic Interaction with Leukemia Cells: A Quartz Crystal Microbalance Bioelectroanalysis on the Cytotoxic Effect. ELECTROANAL 2017. [DOI: 10.1002/elan.201700093] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Naira C. Pesquero
- Instituto de Química, Departamento de Físico-Química, Univ. Estadual Paulista (UNESP); Nanobionics Research Group (www.nanobionics.pro.br) CP355; 14800-900, Araraquara São Paulo Brazil
| | - Fernanda C. Carvalho
- Departamento de Biologia Celular e Molecular e Bioagentes Patogênicos, Faculdade de Medicina de Ribeirão Preto; Universidade de São Paulo (USP); Av. Dos Bandeirantes, 3900 14049-900, Ribeirão Preto São Paulo Brazil
| | - Ronaldo C. Faria
- Departamento de Química; Universidade Federal de São Carlos (UFSCar), CP676; 13560-905, São Carlos São Paulo Brazil
| | - Maria-Cristina Roque-Barreira
- Departamento de Biologia Celular e Molecular e Bioagentes Patogênicos, Faculdade de Medicina de Ribeirão Preto; Universidade de São Paulo (USP); Av. Dos Bandeirantes, 3900 14049-900, Ribeirão Preto São Paulo Brazil
| | - Paulo R. Bueno
- Instituto de Química, Departamento de Físico-Química, Univ. Estadual Paulista (UNESP); Nanobionics Research Group (www.nanobionics.pro.br) CP355; 14800-900, Araraquara São Paulo Brazil
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Santos A, Bueno PR. Glycoprotein assay based on the optimized immittance signal of a redox tagged and lectin-based receptive interface. Biosens Bioelectron 2016; 83:368-78. [DOI: 10.1016/j.bios.2016.04.043] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2016] [Revised: 04/08/2016] [Accepted: 04/14/2016] [Indexed: 12/29/2022]
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11
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Santos A, Carvalho FC, Roque-Barreira MC, Zorzetto-Fernandes AL, Gimenez-Romero D, Monzó I, Bueno PR. Evidence for Conformational Mechanism on the Binding of TgMIC4 with β-Galactose-Containing Carbohydrate Ligand. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2015; 31:12111-12119. [PMID: 26488670 DOI: 10.1021/acs.langmuir.5b03141] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
A deeper understanding of the role of sialic/desialylated groups during TgMIC4-glycoproteins interactions has importance to better clarify the odd process of host cell invasion by members of the apicomplexan phylum. Within this context, we evaluated the interaction established by recombinant TgMIC4 (the whole molecule) with sialylated (bovine fetuin) and desialylated (asialofetuin) glycoproteins by using functionalized quartz crystal microbalance with dissipation monitoring (QCM-D). A suitable receptive surface containing recombinant TgMIC4 for monitoring β-galactose-containing carbohydrate ligand (limit of quantification ∼ 40 μM) was designed and used as biomolecular recognition platform to study the binding and conformational mechanisms of TgMIC4 during the interaction with glycoprotein containing (fetuin), or not, terminal sialic group (asialofetuin). It was inferred that the binding/interaction monitoring depends on the presence/absence of sialic groups in target protein and is possible to be differentiated through a slower binding kinetic step using QCM-D approach (which we are inferring to be thus associated with β-galactose ligand). This slower binding/interaction step is likely supposed (from mechanical energetic analysis obtained in QCM-D measurements) to be involved with Toxoplasma gondii (the causative agent of toxoplasmosis) parasitic invasion accompanied by ligand (galactose) induced binding conformational change (i.e., cell internalization process can be additionally dependent on structural conformational changes, controlled by the absence of sialic groups and to the specific binding with galactose), in addition to TgMIC4-glycoprotein solely recognition binding process.
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Affiliation(s)
- Adriano Santos
- Institute of Chemistry, Physical Chemistry Department, Nanobionics Laboratory, Universidade Estadual Paulista (São Paulo State University) , CP 355, 14800-060 Araraquara, São Paulo, Brazil
| | - Fernanda C Carvalho
- Institute of Chemistry, Physical Chemistry Department, Nanobionics Laboratory, Universidade Estadual Paulista (São Paulo State University) , CP 355, 14800-060 Araraquara, São Paulo, Brazil
| | - Maria-Cristina Roque-Barreira
- Departamento de Biologia Celular e Molecular e Bioagentes Patogênicos, Faculdade de Medicina de Ribeirão Preto, Universidade de São Paulo (USP) , Av. dos Bandeirantes, 3900, Ribeirão Preto, 14049-900 São Paulo, Brazil
| | - André Luiz Zorzetto-Fernandes
- Departamento de Biologia Celular e Molecular e Bioagentes Patogênicos, Faculdade de Medicina de Ribeirão Preto, Universidade de São Paulo (USP) , Av. dos Bandeirantes, 3900, Ribeirão Preto, 14049-900 São Paulo, Brazil
| | - David Gimenez-Romero
- Departamento de Química Física, Facultad de Química, Universitat de València , Avda. Dr. Moliner 50, 46100 Burjassot, Valencia, Spain
| | - Isidro Monzó
- Departamento de Química Física, Facultad de Química, Universitat de València , Avda. Dr. Moliner 50, 46100 Burjassot, Valencia, Spain
| | - Paulo R Bueno
- Institute of Chemistry, Physical Chemistry Department, Nanobionics Laboratory, Universidade Estadual Paulista (São Paulo State University) , CP 355, 14800-060 Araraquara, São Paulo, Brazil
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12
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Geuijen KPM, Halim LA, Schellekens H, Schasfoort RB, Wijffels RH, Eppink MH. Label-Free Glycoprofiling with Multiplex Surface Plasmon Resonance: A Tool To Quantify Sialylation of Erythropoietin. Anal Chem 2015; 87:8115-22. [DOI: 10.1021/acs.analchem.5b00870] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Karin P. M. Geuijen
- Downstream
Processing, Synthon Biopharmaceuticals BV, P.O. Box 7071, 6503 GN Nijmegen, The Netherlands
- Bioprocess
Engineering, Wageningen University, P.O. Box 16, 6700 AA Wageningen, The Netherlands
| | - Liem A. Halim
- Department
of Pharmaceutics, Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, The Netherlands
| | - Huub Schellekens
- Department
of Pharmaceutics, Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, The Netherlands
| | - Richard B. Schasfoort
- IBIS Technologies, Pantheon
5, 7521 PR Enschede, The Netherlands
- Medical
Cell Biophysics Group, MIRA Institute, Faculty of Science and Technology, University of Twente,
P.O. Box 217, 7500 AE Enschede, The Netherlands
| | - René H. Wijffels
- Bioprocess
Engineering, Wageningen University, P.O. Box 16, 6700 AA Wageningen, The Netherlands
- University of Nordland, Faculty of Biosciences and
Aquaculture, N-8049, Bodø, Norway
| | - Michel H. Eppink
- Downstream
Processing, Synthon Biopharmaceuticals BV, P.O. Box 7071, 6503 GN Nijmegen, The Netherlands
- Bioprocess
Engineering, Wageningen University, P.O. Box 16, 6700 AA Wageningen, The Netherlands
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13
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Yakhno TA, Sanin AA, Ilyazov RG, Vildanova GV, Khamzin RA, Astascheva NP, Markovsky MG, Bashirov VD, Yakhno VG. Drying Drop Technology as a Possible Tool for Detection Leukemia and Tuberculosis in Cattle. ACTA ACUST UNITED AC 2015. [DOI: 10.4236/jbise.2015.81001] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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14
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Carvalho FC, Martins DC, Santos A, Roque-Barreira MC, Bueno PR. Evaluating the Equilibrium Association Constant between ArtinM Lectin and Myeloid Leukemia Cells by Impedimetric and Piezoelectric Label Free Approaches. BIOSENSORS-BASEL 2014; 4:358-69. [PMID: 25587428 PMCID: PMC4287707 DOI: 10.3390/bios4040358] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/19/2014] [Revised: 08/25/2014] [Accepted: 09/15/2014] [Indexed: 12/19/2022]
Abstract
Label-free methods for evaluating lectin-cell binding have been developed to determine the lectin-carbohydrate interactions in the context of cell-surface oligosaccharides. In the present study, mass loading and electrochemical transducer signals were compared to characterize the interaction between lectin and cellular membranes by measuring the equilibrium association constant, Ka , between ArtinM lectin and the carbohydrate sites of NB4 leukemia cells. By functionalizing sensor interfaces with ArtinM, it was possible to determine Ka over a range of leukemia cell concentrations to construct analytical curves from impedimetric and/or mass-associated frequency shifts with analytical signals following a Langmuir pattern. Using the Langmuir isotherm-binding model, the Ka obtained were (8.9 ± 1.0) × 10(-5) mL/cell and (1.05 ± 0.09) × 10(-6) mL/cell with the electrochemical impedance spectroscopy (EIS) and quartz crystal microbalance (QCM) methods, respectively. The observed differences were attributed to the intrinsic characteristic sensitivity of each method in following Langmuir isotherm premises.
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Affiliation(s)
- Fernanda C Carvalho
- Department of Physical Chemistry, Chemistry Institute, São Paulo State University (UNESP), 55 Prof. Francisco Degni Street, 14800-060, São Paulo, Brazil; E-Mails: (F.C.C.); (D.C.M.); (A.S.)
| | - Denise C Martins
- Department of Physical Chemistry, Chemistry Institute, São Paulo State University (UNESP), 55 Prof. Francisco Degni Street, 14800-060, São Paulo, Brazil; E-Mails: (F.C.C.); (D.C.M.); (A.S.)
| | - Adriano Santos
- Department of Physical Chemistry, Chemistry Institute, São Paulo State University (UNESP), 55 Prof. Francisco Degni Street, 14800-060, São Paulo, Brazil; E-Mails: (F.C.C.); (D.C.M.); (A.S.)
| | - Maria-Cristina Roque-Barreira
- Department of Cellular and Molecular Biology and Pathogenic Bioagents, Ribeirão Preto Medical School, University of São Paulo (USP), 3900 Bandeirantes Avenue, 14049-900, Ribeirão Preto, São Paulo, Brazil; E-Mail:
| | - Paulo R Bueno
- Department of Physical Chemistry, Chemistry Institute, São Paulo State University (UNESP), 55 Prof. Francisco Degni Street, 14800-060, São Paulo, Brazil; E-Mails: (F.C.C.); (D.C.M.); (A.S.)
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15
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Kluková L, Bertók T, Kasák P, Tkac J. Nanoscale controlled architecture for development of ultrasensitive lectin biosensors applicable in glycomics. ANALYTICAL METHODS : ADVANCING METHODS AND APPLICATIONS 2014; 6:4922-4931. [PMID: 27231486 PMCID: PMC4878709 DOI: 10.1039/c4ay00495g] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/17/2023]
Abstract
In this Minireview the most advanced patterning protocols and transducing schemes for development of ultrasensitive label-free and label-based lectin biosensors for glycoprofiling of disease markers and some cancerous cells are described. Performance of such lectin biosensors with interfacial properties tuned at a nanoscale are critically compared to the most sensitive immunoassay format of analysis and challenges ahead in the field are discussed. Moreover, key elements for future advances of such devices on the way to enhance robustness and practical applicability of lectin biosensors are revealed.
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Affiliation(s)
- L Kluková
- Institute of Chemistry, Slovak Academy of Sciences, Dúbravská cesta 9, 845 38 Bratislava, Slovakia
| | - T Bertók
- Institute of Chemistry, Slovak Academy of Sciences, Dúbravská cesta 9, 845 38 Bratislava, Slovakia
| | - P Kasák
- Center for Advanced Materials, Qatar University, P.O. Box 2713, Doha, Qatar; Department for Biomaterial Research, Polymer Institute, Slovak Academy of Sciences, Dúbravská cesta 9, Bratislava 845 38, Slovakia
| | - J Tkac
- Institute of Chemistry, Slovak Academy of Sciences, Dúbravská cesta 9, 845 38 Bratislava, Slovakia
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16
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Lai BH, Chang CH, Yeh CC, Chen DH. Direct binding of Concanvalin A onto iron oxide nanoparticles for fast magnetic selective separation of lactoferrin. Sep Purif Technol 2013. [DOI: 10.1016/j.seppur.2013.02.020] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
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17
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Reuel NF, Mu B, Zhang J, Hinckley A, Strano MS. Nanoengineered glycan sensors enabling native glycoprofiling for medicinal applications: towards profiling glycoproteins without labeling or liberation steps. Chem Soc Rev 2013; 41:5744-79. [PMID: 22868627 DOI: 10.1039/c2cs35142k] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Nanoengineered glycan sensors may help realize the long-held goal of accurate and rapid glycoprotein profiling without labeling or glycan liberation steps. Current methods of profiling oligosaccharides displayed on protein surfaces, such as liquid chromatography, mass spectrometry, capillary electrophoresis, and microarray methods, are limited by sample pretreatment and quantitative accuracy. Microarrayed platforms can be improved with methods that better estimate kinetic parameters rather than simply reporting relative binding information. These quantitative glycan sensors are enabled by an emerging class of nanoengineered materials that differ in their mode of signal transduction from traditional methods. Platforms that respond to mass changes include a quartz crystal microbalance and cantilever sensors. Electronic response can be detected from electrochemical, field effect transistor, and pore impedance sensors. Optical methods include fluorescent frontal affinity chromatography, surface plasmon resonance methods, and fluorescent carbon nanotubes. After a very brief primer on glycobiology and its connection to medicine, these emerging systems are critically reviewed for their potential use as core sensors in future glycoprofiling tools.
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Affiliation(s)
- Nigel F Reuel
- Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
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Diltemiz SE, Hür D, Keçili R, Ersöz A, Say R. New synthesis method for 4-MAPBA monomer and using for the recognition of IgM and mannose with MIP-based QCM sensors. Analyst 2013; 138:1558-63. [DOI: 10.1039/c2an36291k] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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19
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Speight RE, Cooper MA. A Survey of the 2010 Quartz Crystal Microbalance Literature. J Mol Recognit 2012; 25:451-73. [DOI: 10.1002/jmr.2209] [Citation(s) in RCA: 104] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Robert E. Speight
- Institute for Molecular Bioscience; The University of Queensland; St. Lucia; Brisbane; 4072; Australia
| | - Matthew A. Cooper
- Institute for Molecular Bioscience; The University of Queensland; St. Lucia; Brisbane; 4072; Australia
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Mislovičová D, Katrlík J, Paulovičová E, Gemeiner P, Tkac J. Comparison of three distinct ELLA protocols for determination of apparent affinity constants between Con A and glycoproteins. Colloids Surf B Biointerfaces 2012; 94:163-9. [DOI: 10.1016/j.colsurfb.2012.01.036] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2011] [Revised: 12/22/2011] [Accepted: 01/23/2012] [Indexed: 11/28/2022]
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21
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A novel approach to determining the affinity of protein–carbohydrate interactions employing adherent cancer cells grown on a biosensor surface. Biosens Bioelectron 2012; 35:160-166. [DOI: 10.1016/j.bios.2012.02.037] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2011] [Revised: 02/15/2012] [Accepted: 02/17/2012] [Indexed: 11/18/2022]
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22
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Campuzano S, Orozco J, Kagan D, Guix M, Gao W, Sattayasamitsathit S, Claussen JC, Merkoçi A, Wang J. Bacterial isolation by lectin-modified microengines. NANO LETTERS 2012; 12:396-401. [PMID: 22136558 PMCID: PMC3256279 DOI: 10.1021/nl203717q] [Citation(s) in RCA: 155] [Impact Index Per Article: 12.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
Abstract
New template-based self-propelled gold/nickel/polyaniline/platinum (Au/Ni/PANI/Pt) microtubular engines, functionalized with the Concanavalin A (ConA) lectin bioreceptor, are shown to be extremely useful for the rapid, real-time isolation of Escherichia coli (E. coli) bacteria from fuel-enhanced environmental, food, and clinical samples. These multifunctional microtube engines combine the selective capture of E. coli with the uptake of polymeric drug-carrier particles to provide an attractive motion-based theranostics strategy. Triggered release of the captured bacteria is demonstrated by movement through a low-pH glycine-based dissociation solution. The smaller size of the new polymer-metal microengines offers convenient, direct, and label-free optical visualization of the captured bacteria and discrimination against nontarget cells.
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Affiliation(s)
- Susana Campuzano
- Department of Nanoengineering, University of California-San Diego, La Jolla, CA 92093, USA
- Department of Analytical Chemistry, Complutense University of Madrid, E-28040 Madrid, Spain
| | - Jahir Orozco
- Department of Nanoengineering, University of California-San Diego, La Jolla, CA 92093, USA
| | - Daniel Kagan
- Department of Nanoengineering, University of California-San Diego, La Jolla, CA 92093, USA
| | - Maria Guix
- Department of Nanoengineering, University of California-San Diego, La Jolla, CA 92093, USA
- ICREA & Nanobioelectronics & Biosensors Group, Catalan Institute of Nanotechnology, CIN2 (ICN-CSIC), Bellaterra, E-08193 Barcelona, Spain
| | - Wei Gao
- Department of Nanoengineering, University of California-San Diego, La Jolla, CA 92093, USA
| | | | - Jonathan C. Claussen
- Department of Nanoengineering, University of California-San Diego, La Jolla, CA 92093, USA
| | - Arben Merkoçi
- ICREA & Nanobioelectronics & Biosensors Group, Catalan Institute of Nanotechnology, CIN2 (ICN-CSIC), Bellaterra, E-08193 Barcelona, Spain
| | - Joseph Wang
- Department of Nanoengineering, University of California-San Diego, La Jolla, CA 92093, USA
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Safina G. Application of surface plasmon resonance for the detection of carbohydrates, glycoconjugates, and measurement of the carbohydrate-specific interactions: A comparison with conventional analytical techniques. A critical review. Anal Chim Acta 2012; 712:9-29. [DOI: 10.1016/j.aca.2011.11.016] [Citation(s) in RCA: 53] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2011] [Revised: 10/07/2011] [Accepted: 11/04/2011] [Indexed: 12/16/2022]
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24
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Cheng CI, Chang YP, Chu YH. Biomolecular interactions and tools for their recognition: focus on the quartz crystal microbalance and its diverse surface chemistries and applications. Chem Soc Rev 2012; 41:1947-71. [DOI: 10.1039/c1cs15168a] [Citation(s) in RCA: 170] [Impact Index Per Article: 14.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Pedroso MM, Pesquero NC, Thomaz SMO, Roque-Barreira MC, Faria RC, Bueno PR. Jacalin interaction with human immunoglobulin A1 and bovine immunoglobulin G1: affinity constant determined by piezoelectric biosensoring. Glycobiology 2011; 22:326-31. [PMID: 21964726 DOI: 10.1093/glycob/cwr099] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
The affinity of the D-galactose-binding lectin from Artocarpus heterophyllus lectin, known as jacalin, with immonuglobulins (Igs) was determined by biofunctionalization of a piezoelectric transducer. This piezoelectric biofunctionalized transducer was used as a mass-sensitive analytical tool, allowing the real-time binding analysis of jacalin-human immunoglobulin A1 (IgA(1)) and jacalin-bovine IgG(1) interactions from which the apparent affinity constant was calculated. The strategy was centered in immobilizing jacalin on the gold electrode's surface of the piezoelectric crystal resonator using appropriate procedures based on self-assembling of 11-mercaptoundecanoic acid and 2-mercaptoethanol thiol's mixture, a particular immobilization strategy by which it was possible to avoid cross-interaction between the proteins over electrode's surface. The apparent affinity constants obtained between jacalin-human IgA(1) and jacalin-bovine IgG(1) differed by 1 order of magnitude [(8.0 ± 0.9) 10(5) vs (8.3 ± 0.1) 10(6) L mol(-1)]. On the other hand, the difference found between human IgA(1) and human IgA(2) interaction with jacalin, eight times higher for IgA(1), was attributed to the presence of O-linked glycans in the IgA(1) hinge region, which is absent in IgA(2). Specific interaction of jacalin with O-glycans, proved to be present in the human IgA(1) and hypothetically present in bovine IgG(1) structures, is discussed as responsible for the obtained affinity values.
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Affiliation(s)
- Mariele M Pedroso
- Departamento de Química, Universidade Federal de São Carlos, CP 676, 13560-905, São Carlos, São Paulo, Brazil
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Label free gravimetric detection of epidermal growth factor receptor by antibody immobilization on quartz crystal microbalance. Process Biochem 2011. [DOI: 10.1016/j.procbio.2010.10.006] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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27
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Tang D, Li Q, Tang J, Su B, Chen G. An enzyme-free quartz crystal microbalance biosensor for sensitive glucose detection in biological fluids based on glucose/dextran displacement approach. Anal Chim Acta 2011; 686:144-9. [DOI: 10.1016/j.aca.2010.11.054] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2010] [Revised: 11/28/2010] [Accepted: 11/30/2010] [Indexed: 11/29/2022]
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28
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Safina G, Duran IB, Alasel M, Danielsson B. Surface plasmon resonance for real-time study of lectin-carbohydrate interactions for the differentiation and identification of glycoproteins. Talanta 2011; 84:1284-90. [PMID: 21641439 DOI: 10.1016/j.talanta.2011.01.030] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2010] [Revised: 01/09/2011] [Accepted: 01/14/2011] [Indexed: 11/25/2022]
Abstract
A study of specific interactions between lectins and glycoproteins has been carried out using surface plasmon resonance (SPR) in a flow-injection mode. Lectins were covalently immobilised on the surfaces of the microfluidic sensor chip via amine coupling and serum glycoproteins were injected into the flow channels. Specific lectin-glycoprotein interactions caused the shift of refractive index proportional to the mass concentration accumulated on the channel surface. Lectins showed different affinity to the tested glycoproteins and each glycoprotein displayed its own lectin-binding pattern. It is possible to distinguish and identify even glycoproteins with similar sugar structures by simple and quick screening. The working conditions of the assay were optimised. The lectin-based SPR made it possible to carry out the label-free detection of glycoproteins within a broad concentration range with a good linearity. Regeneration conditions for the surface of the sensor chip were found and optimised. Combination of 10mM HCl and 10mM glycine-HCl (pH 2.5) removes the bound glycoproteins from the lectin surface without damaging it. The kinetic and affinity parameters of lectin-glycoprotein binding were evaluated. The proposed method was tested on human glycosylated serum. Combination of the lectin panel with SPR is suitable both for specific screening and for sensitive assay of serum glycoproteins.
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Affiliation(s)
- Gulnara Safina
- Department of Pure and Applied Biochemistry, Lund University, Box 124, 221 00 Lund, Sweden.
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