Copper nanoclusters/polydopamine nanospheres based fluorescence aptasensor for protein kinase activity determination

Fluorescent metal nanoclusters: From luminescence mechanism to applications in enzyme activity assays

Metal nanoclusters (MNCs) have outstanding fluorescence property and biocompatibility, which show widespread applications in biological analysis. Particularly, evaluation of enzyme activity with the fluorescent MNCs has been developed rapidly within the past several years. In this review, we first introduced the fluorescent mechanism of mono- and bi-metallic nanoclusters, respectively, whose interesting luminescence properties are mainly resulted from electron transfer between the lowest unoccupied molecular orbital (LUMO) and highest occupied molecular orbital (HOMO) energy levels. Meanwhile, the charge migration within the structure occurs through ligand-metal charge transfer (LMCT) or ligand-metal-metal charge transfer (LMMCT). On such foundation, diverse enzyme activities were rigorously evaluated, including three transferases and nine hydrolases, in turn harvesting rapid research progresses within past 5 years. Finally, we summarized the design strategies for evaluating enzyme activity with the MNCs, presented the major issues and challenges remained in the relevant research, coupled by showing some improvement measures. This review will attract researchers dedicated to the studies of the MNCs and provide some constructive insights for their further applications in enzyme analysis.

Highly Sensitive Detection of Chymotrypsin Based on Metal Organic Frameworks with Peptides Sensors

In this study, peptides and composite nanomaterials based on copper nanoclusters (CuNCs) were used to detect chymotrypsin. The peptide was a chymotrypsin-specific cleavage peptide. The amino end of the peptide was covalently bound to CuNCs. The sulfhydryl group at the other end of the peptide can covalently combine with the composite nanomaterials. The fluorescence was quenched by fluorescence resonance energy transfer. The specific site of the peptide was cleaved by chymotrypsin. Therefore, the CuNCs were far away from the surface of the composite nanomaterials, and the intensity of fluorescence was restored. The limit of detection (LOD) using Porous Coordination Network (PCN)@graphene oxide (GO) @ gold nanoparticle (AuNP) sensor was lower than that of using PCN@AuNPs. The LOD based on PCN@GO@AuNPs was reduced from 9.57 pg mL^-1 to 3.91 pg mL^-1. This method was also used in a real sample. Therefore, it is a promising method in the biomedical field.

Ascorbic Acid Sensor Based on CdS QDs@PDA Fluorescence Resonance Energy Transfer

An ascorbic acid (AA) sensor was constructed based on the fluorescence resonance energy transfer (FRET) between CdS quantum dots (CdS QDs) and polydopamine (PDA) to detect trace AA sensitively. FRET occurred due to the broad absorption spectrum of PDA completely overlapped with the narrow emission spectrum of CdS QDs. The fluorescence of CdS QDs was quenched and in the "off" state. When AA was present, the conversion of DA to PDA was hindered and the FRET disappeared, resulting in the fluorescence of CdS QDs in an "on" state. Importantly, the degree of fluorescence recovery of CdS QDs displayed a desirable linear correlation with the concentration of AA in the range of 5.0-100.0 μmol/L, the linear equation is y=0.0119cAA+0.3113, and the detection limit is 1.16 μmol/L (S/N = 3, n = 9). There was almost no interference with common amino acid, glucose and biological sulfhydryl small molecules to AA. Trace amount of AA in vitamin C tablets were determined and satisfactory results were obtained; the recoveries were observed to be 98.01-100.7%.

Copper nanocluster composites for analytical (bio)-sensing and imaging: a review

As an ideal substitute for traditional organic fluorescent dyes or up-conversion nanomaterials, copper nanoclusters (CuNCs) have developed rapidly and have been involved in exciting achievements in versatile applications. The emergence of novel CuNCs composites improves the poor stability and fluorescence intensity of CuNCs. With this in mind, great efforts have been made to develop a wide variety of CuNCs composites, and impressive progress has been made in the past few years. In this review, we systematically summarize absorption, fluorescence, electrochemiluminescence, and catalytic properties and focus on the multiple factors that affect the fluorescence properties of CuNCs. The fluorescence properties of CuNCs are discussed from the point of view of core size, surface ligands, self-assembly, metal defects, pH, solvent, ions, metal doping, and confinement effect. Especially, we illustrate the research progress and representative applications of CuNCs composites in bio-related fields, which have received considerable interests in the past years. Additionally, the sensing mechanism of CuNCs composites is highlighted. Finally, we summarize current challenges and look forward to the future development of CuNCs composites. Schematic diagram of the categories, possible sensing mechanisms, and bio-related applications of copper nanoclusters composites.

Sensitive detection of S. Aureus using aptamer- and vancomycin -copper nanoclusters as dual recognition strategy

The proposed aptamer- and antibiotic-based dual detection sensor, combines copper nanoclusters (CuNCs) as an effective approach for the recognition and quantification of Staphylococcus aureus (S. aureus) as a pathogenic bacteria. A facile method for CuNCs based on vancomycin as the template using a fluorescence platform was proposed for the recognition of the S. aureus whole cells via antibiotic and aptamer. Using dual receptor functionalized CuNCs linked to vancomycin and a specific aptamer and during aggregation induce emission process enhanced fluorescence signal linearly with S. aureus concentrations between 10²-10⁸ CFU/mL, and the detection limit was 80 CFU/mL after 45 min as the optimum incubation time. Non-target bacteria generated negative results, proving the high specificity of the presented sensor. This strategy showed recoveries ranging 86%-98% in milk as real sample and can be used for the development of universal detection platforms for efficient and specific S. aureus detection with great potential applications for monitoring pathogenic bacteria.

Extraction and electrochemical sensing of pesticides in food and environmental samples by use of polydopamine-based materials

Polydopamine has high adsorption capacities for pollutants such as pesticides in food and environmental matrices. Consequently, it has found applications in some sorbent-based micro-extraction techniques such as solid phase micro-extraction and magnetic solid phase extraction. This paper gives a detailed review of the application of polydopamine-based adsorbents for the extraction of pesticides in food and environmental matrices using these techniques. The adhesive properties of polydopamine have made it to be a suitable material for the immobilisation of the components of electrochemical sensors used to detect pesticides in food and environmental matrices. This paper also gives a comprehensive review on the application of polydopamine in electrochemical sensors such as acetylcholinesterase sensors, molecularly imprinted sensors and aptasensors. The use of polydopamine-based adsorbents during the extraction and electrochemical sensing of pesticides in food and environmental matrices is not free of challenges. In this review, the challenges encountered during the use of polydopamine-based adsorbents are also discussed.

Label-Free Detection of Staphylococcus aureus Based on Bacteria-Imprinted Polymer and Turn-on Fluorescence Probes

The effective identification and quantitative determination of Staphylococcus aureus is a major public health concern. Here, an innovative strategy that combines a bacteria-imprinted polydimethylsiloxane film for bacterial recognition and fluorescence resonance energy transfer platform for turn-on fluorescence sensing is demonstrated. The bacteria-imprinted polydimethylsiloxane film was facilely fabricated to generate corresponding specific sites on the polydimethylsiloxane surface via stamp imprinting using Staphylococcus aureus as template followed by modification with 1H,1H,2H,2H-perfluorooctyltriethoxysilane. The fluorescence resonance energy transfer platform was developed through electrostatic interaction between citrate-functional copper clusters and dopamine-stabilized gold nanoparticles. When the Staphylococcus aureus are present, the 1H,1H,2H,2H-perfluorooctyltriethoxysilane-modified bacteria-imprinted polydimethylsiloxane film can precisely capture the target; subsequently, the negatively charged bacteria compete with citrate-functional copper clusters and bind to dopamine-stabilized gold nanoparticles, leading to the fluorescence recovery of citrate-functional copper clusters. The entire detection process was achieved within 135 min, showing a wide linear calibration response from 10 to 1 × 10⁷ cfu mL^-1 with a low detection limit of 11.12 cfu mL^-1. Furthermore, the recoveries from spiked samples were from 97.7 to 101.90% with relative standard derivations lower than 10%. The established label-free assay of measuring Staphylococcus aureus is rapid, sensitive, specific, and efficient.

Sensing of mercury ions in Porphyra by Copper @ Gold nanoclusters based ratiometric fluorescent aptasensor

A novel aptamer-modified Copper @ Gold nanoclusters (apt-Cu@Au NCs) based ratiometric fluorescent probe was developed for mercury ions (Hg²⁺) determination in Porphyra. The apt-Cu@Au NCs were well dispersed in solution without Hg²⁺ but combined together for the formation of thymidine-Hg-thymidine structure with the addition of Hg²⁺, which further caused the changes in their fluorescence intensities owing to fluorescence resonance energy transfer. Along with that, the changes in fluorescent colors are visible to the naked eye. Accordingly, Hg²⁺ were determined ranging from 0.1 to 9.0 μM by fluorescence analysis with the detection limit of 4.92 nM. Moreover, a homemade device utilizing smartphone and microfluidic chip was designed for colorimetric determination of Hg²⁺ ranging from 0.5 to 7.0 μM with good portability and usefulness. The proposed methods were used for Hg²⁺ detection in Porphyra with the recoveries of 101.83-114.00%, suggesting the considerable potential for evaluating Hg²⁺ levels in aquatic products.

Size-Dependent Modulation of Polydopamine Nanospheres on Smart Nanoprobes for Detection of Pathogenic Bacteria at Single-Cell Level and Imaging-Guided Photothermal Bactericidal Activity

Pathogenic bacterial fouling in agriculture and food-associated products poses mounting food safety concerns today. Efficient integration of precise tracking and on-demand bacterial killing to achieve the source control of pathogenic bacteria at the single-cell level is one of the most valuable antifouling methods for safeguarding food safety but remains unexplored. Here, we report an all-in-one design strategy as a proof of concept to establish a stimuli-responsive nanoprobe PDANSs-FAM-Apt for the detection of Staphylococcus aureus (S. aureus) at the single-cell level, which could be capable of guiding the on-demand photothermal killing of bacteria upon near-infrared (NIR) light irradiation. By examining the size-dependent modulation of the fluorescence resonance energy transfer efficiency to polydopamine nanospheres (PDANSs), PDANSs-FAM-Apt was finally assembled by 6-carboxyfluorescein-terminated S. aureus, binding the aptamer (FAM-Apt) and PDANSs at ∼258 nm through π-π stacking interactions. As a result, PDANSs-FAM-Apt exhibits a remarkable fluorescence enhancement (∼261-fold) to S. aureus with a satisfactory detection limit of 1.0 cfu/mL, allowing for assay at the single-cell level and thus ultralow background fluorescence imaging of S. aureus as well as its biofilms. Moreover, PDANSs-FAM-Apt shows a high photothermal bactericidal property upon NIR light irradiation, endowing it with the strong capacity to efficiently produce heat for destroying S. aureus and its biofilms with the guidance of imaging results. This work emphasizes the versatility of using the combination of stimuli-responsive fluorescence imaging dependent on the PDANS size modulation and NIR light-activated photothermal antibacterial activity to design stimuli-responsive nanoprobes with an improved precision for pathogenic bacteria monitoring and source controlling, which opens a promising antifouling avenue to eliminate bacteria and disrupt bacterial biofilms in agriculture and food-related industries.

New Enhanced Method for Determination of Trace Sulfamethodxazole Based on the Fluorescence Behaviors of Cyclodextrins in Water Solutions

The widespread occurrence of sulfonamides (SAs) in the environment water has rasied great concerns about their potential to antibiotics resistance. In this study, the fluorescence behaviors of sulfamethoxazole (SMZ) representing certain properties of the SAs mixed with three different kinds of cyclodextrins (CDs) in water solutions were investigated, respectively. The result reported that the shapes of the fluorescence peak and its position for the SMZ that were mixed with the CDs were almost the same as those of the standard SMZ, respectively. In addition, compared with the identical control sample the fluorescence of SMZ mixed with each of the CD was greatly enhanced. Therefore, a new simple, and sensitive spectrofluorimetric method for the determination of SMZ was established in water solutions. and the dynamic linear ranges varied from 0.01 to 0.7 mg/L with the detection limit of 7.1 ng/L. And the correlation coefficient was more than 99.9%. Significantly, this new method was successfully applied to direct determination of SMZ in pharmaceutical compounds. Moreover, the results showed that the SMZ could separately form the 1:1 supramolecular compound with each of the CD.

A review: Recent advances in ultrasensitive and highly specific recognition aptasensors with various detection strategies

One of the most studied topics in analytical chemistry and physics is to develop bio-sensors. Aptamers are small single-stranded RNA or DNA oligonucleotides (5-25 kDa), which have advantages in comparison to their antibodies such as physicochemical stability and high binding specificity. They are able to integrate with proteins or small molecules, including intact viral particles, plant lectins, gene-regulation factor, growth factors, antibodies and enzymes. The aptamers have reportedly shown some unique characteristics, including long shelf-life, simple modification to provide covalent bonds to material surfaces, minor batch variation, cost-effectiveness and slight denaturation susceptibility. These features led important efforts toward the development of aptamer-based sensors, known as apta-sensors classified into optical, electrical and mass-sensitive based on the signal transduction mode. This review provided a number of current advancements in selecting, development criteria, and aptamers application with the focus on the effect of apta-sensors, specifically for disease-associated analyses. The review concentrated on the current reports of apta-sensors that are used for evaluating different food and environmental pollutants.

Dual-emission carbon dots-stabilized copper nanoclusters for ratiometric and visual detection of Cr2O72- ions and Cd2+ ions

The pollution of heavy metal increases greatly accompanying by the development of industries. So, it is very important to build up a quick and reliable technique for detection of heavy metal ions. In this work, we developed a simple and convenient method for ratiometric and visual detection of Cr₂O₇^2- ions and Cd²⁺ ions. We utilized glutathione as raw material to prepare cyan-emitting carbon dots (GSH@CDs). The GSH@CDs were further used as the template to prepare carbon dots-stabilized copper nanoclusters (GSH@CDs-Cu NCs) that displayed two well-separated emission peaks respectively at 450 nm and 750 nm. The GSH@CDs-Cu NCs can be applied for the ratiometric and visual detection of Cr₂O₇^2- and Cd²⁺ ions based on the fluorescence quenching or enhancement of GSH@CDs-Cu NCs at 750 nm. A linear range of 2-40 μmol L^-1 with a detection limit of 0.9 μmol L^-1 for Cr₂O₇^2- ions, and a linear range of 0-20 μmol L^-1 with a detection limit of 0.6 μmol L^-1 for Cd²⁺ ions were achieved based on this method. The fluorescent test strips for Cr₂O₇^2- ions were successfully prepared based on GSH@CDs-Cu NCs. Moreover, the GSH@CDs-Cu NCs were successfully applied to determine Cr₂O₇^2- and Cd²⁺ ions in real samples with promising results.

A label-free aptasensor for turn-on fluorescent detection of ochratoxin A based on aggregation-induced emission probe

A novel label-free fluorescence aptasensor used for the detection of ochratoxin A (OTA) is presented in this study. When aggregated on the surface of DNA aptamer, aggregation-induced emission (AIE) fluorescence probe presents turn-on fluorescence property. The method proposed in this article was based on an AIE probe, 4, 4-(1E,1E)-2, 2-(anthracene-9, 10-diyl) bis (ethene-2, 1-diyl) bis (N, N, N-trimethylbenzenaminium iodide) (DSAI). With OTA present, the aptamer will combine with OTA and the conformation of the aptamer will switch to an antiparallel G-quadruplex from the initial random coil, which obstructs its digestion by Exo I. After the solution is added with DSAI, DSAI will aggregate on the surface of the aptamer/OTA complex and produces a strong emission. In the range of 5 to 500 ng · ml^-1 OTA concentrations, the fluorescence increases with a linear logarithm relationship. The detection limit is 1.9 ng · ml^-1. This method was used to detect OTA in spiked real samples, with recoveries and RSDs in the range of 92.2% to 106.3%, and 2.7% to 5.2%, respectively.

A fluorometric sensing method for sensitive detection of trypsin and its inhibitor based on gold nanoclusters and gold nanoparticles

In this work, a facile, label-free, and sensitive fluorometric strategy for detection of trypsin and its inhibitor was established on the basis of the fluorescence resonance energy transfer (FRET) between mercaptoundecanoic acid functionalized gold nanoclusters (AuNCs) and gold nanoparticles (AuNPs) via protamine as a bridge. Protamine can trigger the aggregation of AuNPs and link AuNCs with aggregated AuNPs through electrostatic interaction. Compared with monodisperse AuNPs, the UV-vis absorption band of aggregated AuNPs overlapped considerably with the emission spectrum of AuNCs. Thus, the fluorescence of AuNCs was obviously quenched by the aggregated AuNPs through FRET. In the presence of trypsin, protamine was hydrolyzed into small fragments, leading to the deaggregation of AuNPs and breaking of the short distance between AuNPs and AuNCs, so the FRET process was inhibited, and the fluorescence of AuNCs was recovered. The increase in the fluorescence intensity of AuNCs was directly related to the amount of trypsin. Hence trypsin can be determined on the basis of the variation of fluorescence intensity, with a linear range of 5-5000 ng mL-1 and a detection limit of 1.9 ng mL-1. In addition, this system was used for the detection of trypsin inhibitor by application of the inhibitor isolated from soybean as a model. The sensing method was applied for trypsin detection in human urine and commercial multienzyme tablet samples with satisfactory results. Graphical abstract ᅟ.