The past, present and future of algal continuous cultures in basic research and commercial applications

The 'Erlenmeter': a low-cost, open-source turbidimeter for no-sampling phenotyping of microorganism growth

This work presents a low-cost, open-source turbidimeter, the 'Erlenmeter', designed to monitor the growth of microorganisms in batch cultures. It is easy to build, based exclusively on inexpensive off-the-shelf electronic components and 3D-printed parts. The Erlenmeter allows measuring the optical density of cultures on standard Erlenmeyer flasks without the need to open the flasks to collect aliquots, ensuring speed, minimal use of consumables, and elimination of the risk of contamination. These features make it particularly well-suited not just for routine research assays but also for experimental teaching. Here we illustrate the use of the Erlenmeter turbidimeter to record the growth of the microalga Phaeodactylum tricornutum, of the bacterium Escherichia coli, and of the yeast Saccharomyces cerevisiae, model organisms that are widely used in research and teaching. The Erlenmeter allows a detailed characterization of the growth curves of all organisms, confirming its usefulness for studying microbial populations dynamics both for research purposes and in classroom settings.

Fast screening method to identify salinity tolerant strains of foliose Ulva species. Low salinity leads to increased organic matter of the biomass

Sea lettuce (Ulva) is recognised for its potential in food, pharmaceutical, nutraceutical, biorefinery and bioremediation industries and is increasingly being cultivated. The requirements of those industries vary widely in terms of biomass composition. Ulva biomass composition and growth is known to be directly influenced by environmental factors, e.g., temperature, light, salinity, nutrient availability as well as by genetic factors and likely by microbiome composition. In order to select for the highest yielding strains in a given environment, we tested the suitability of common-garden experiments, i.e., the co-cultivation of different strains grown under shared conditions. Fifteen strains from six different foliose Ulva species were grown together under two different salinities, 35 ppt and 15 ppt. After 32 days, only U. australis strains remained at both salinities. If selection at low salinity was mostly based on survival, the selection process at seawater salinity was driven by competition, largely based on growth performance. Growth rates after a month were very similar at both salinities, suggesting the U. australis strains cope equally well in either condition. However, the composition of the biomass produced in both environments varied, with the content of all organic compounds being higher at low salinity, and the ash content being reduced in average by 66%. To summarize, this study provides an established bulk-selection protocol for efficiently screening large numbers of locally-sourced strains and highlights the potential of low salinity treatments for increased organic matter content, particularly in carbohydrates.

Supplementary Information

The online version contains supplementary material available at 10.1007/s10811-024-03222-0.

Development of a bench-scale photobioreactor with a novel recirculation system for continuous cultivation of microalgae

Microalgae cultivation can be used to increase the sustainability of carbon emitting processes, converting the CO₂ from exhaust gases into fuels, food and chemicals. Many of the carbon emitting industries operate in a continuous manner, for periods that can span days or months, resulting in a continuous stream of gas emissions. Biogenic CO₂ from industrial microbiological processes is one example, since in many cases it becomes unsustainable to stop these processes on a daily or weekly basis. To correctly sequester these emissions, microalgae systems must be operated under continuous constant conditions, requiring photobioreactors (PBRs) that can act as chemostats for long periods of time. However, in order to optimize culture parameters or study metabolic responses, bench-scale setups are necessary. Currently there is a lack of studies and design alternatives using chemostat, since most works focus on batch assays or semi-continuous cultures. Therefore, this work focused on the development of a continuous bench-scale PBR, which combines a retention vessel, a photocollector and a degasser, with an innovative recirculation system, that allows it to operate as an autotrophic chemostat, to study carbon sequestration from a biogenic CO₂-rich constant air stream. To assess its applicability, the PBR was used to cultivate the green microalga Haematococcus pluvialis using as sole carbon source the CO₂ produced by a coupled heterotrophic bacterial chemostat. An air stream containing ≈0.35 vol% of CO_2, was fed to the system, and it was evaluated in terms of stability, carbon fixation and biomass productivity, for dilution rates ranging from 0.1 to 0.5 d^-1. The PBR was able to operate under chemostat conditions for more than 100 days, producing a stable culture that generated proportional responses to the stimuli it was subjected to, attaining a maximum biomass productivity of 183 mg/L/d with a carbon fixation efficiency of ≈39% at 0.3 d^-1. These results reinforce the effectiveness of the developed PBR system, making it suitable for laboratory-scale studies of continuous photoautotrophic microalgae cultivation.

Growth parameters and responses of green algae across a gradient of phototrophic, mixotrophic and heterotrophic conditions

Many studies have shown that algal growth is enhanced by organic carbon and algal mixotrophy is relevant for physiology and commercial cultivation. Most studies have tested only a single organic carbon concentration and report different growth parameters which hampers comparisons and improvements to algal cultivation methodology. This study compared growth of green algae Chlorella vulgaris and Chlamydomonas reinhardtii across a gradient of photoautotrophic-mixotrophic-heterotrophic culture conditions, with five acetate concentrations. Culture growth rates and biomass achieved were compared using different methods of biomass estimation. Both species grew faster and produced the most biomass when supplied with moderate acetate concentrations (1-4 g L^-1), but light was required to optimize growth rates, biomass yield, cell size and cell chlorophyll content. Higher acetate concentration (10 g L^-1) inhibited algal production. The choice of growth parameter and method to estimate biomass (optical density (OD), chlorophyll a fluorescence, flow cytometry, cell counts) affected apparent responses to organic carbon, but use of OD at 600, 680 or 750 nm was consistent. There were apparent trade-offs among exponential growth rate, maximum biomass, and culture time spent in exponential phase. Different cell responses over 1-10 g L^-1 acetate highlight profound physiological acclimation across a gradient of mixotrophy. In both species, cell size vs cell chlorophyll relationships were more constrained in photoautotrophic and heterotrophic cultures, but under mixotrophy, and outside exponential growth phase, these relationships were more variable. This study provides insights into algal physiological responses to mixotrophy but also has practical implications for choosing parameters for monitoring commercial algal cultivation.

Isolation of Extracellular Vesicles From Microalgae: A Renewable and Scalable Bioprocess

Extracellular vesicles (EVs) play a crucial role as potent signal transducers among cells, with the potential to operate cross-species and cross-kingdom communication. Nanoalgosomes are a subtype of EVs recently identified and isolated from microalgae. Microalgae represent a natural bioresource with the capacity to produce several secondary metabolites with a broad range of biological activities and commercial applications. The present study highlights the upstream and downstream processes required for the scalable production of nanoalgosomes from cultures of the marine microalgae Tetraselmis chuii. Different technical parameters, protocols, and conditions were assessed to improve EVs isolation by tangential flow filtration (TFF), aiming to enhance sample purity and yield. The optimization of the overall bioprocess was enhanced by quality control checks operated through robust biophysical and biochemical characterizations. Further, we showed the possibility of recycling by TFF microalgae cells post-EVs isolation for multiple EV production cycles. The present results highlight the potential of nanoalgosome production as a scalable, cost-effective bioprocess suitable for diverse scientific and industrial exploitations.

Application of Microalgal Stress Responses in Industrial Microalgal Production Systems

Adaptive laboratory evolution (ALE) has been widely utilized as a tool for developing new biological and phenotypic functions to explore strain improvement for microalgal production. Specifically, ALE has been utilized to evolve strains to better adapt to defined conditions. It has become a new solution to improve the performance of strains in microalgae biotechnology. This review mainly summarizes the key results from recent microalgal ALE studies in industrial production. ALE designed for improving cell growth rate, product yield, environmental tolerance and wastewater treatment is discussed to exploit microalgae in various applications. Further development of ALE is proposed, to provide theoretical support for producing the high value-added products from microalgal production.

Green Process: Improved Semi-Continuous Fermentation of Pichia pastoris Based on the Principle of Vitality Cell Separation

The large-scale fermentation of Pichia pastoris for recombinant protein production would be time consuming and produce a large amount of waste yeast. Here we introduce a novel semi-continuous fermentation process for P. pastoris GS115 that can separate vitality cells from broth and recycle the cells to produce high-secretory recombinant pectate lyase. It is based on differences in cell sedimentation coefficients with the formation of salt bridges between metal ions and various cell states. Compared to batch-fed cultivation and general semi-continuous culture, the novel process has significant advantages, such as consuming fewer resources, taking less time, and producing less waste yeast. Sedimentation with the addition of Fe3+ metal ions consumed 14.8 ± 0.0% glycerol, 97.8 ± 1.3% methanol, 55.0 ± 0.9 inorganic salts, 81.5 ± 0.0% time cost, and 77.0 ± 0.1% waste yeast versus batch-fed cultivation to produce an equal amount of protein; in addition, the cost of solid-liquid separation was lower for cells in the collected fermentation broth. The process is economically and environmentally efficient for producing recombinant proteins.

A novel of transforming wastewater pollution into resources for desertification control by sand-consolidating cyanobacteria, Scytonema javanicum

Cultivation of desert cyanobacteria in wastewater can lead to the optimal redistribution of regional resources and is likely to solve two global problems, i.e., wastewater pollution and desertification. However, the potential of using wastewater instead of traditional artificial culture media to cultivate sand-consolidating cyanobacteria for desert management is not well understood. This study compares undistilled and distilled wastewater with an artificial culture medium (BG11₀) to explore the potential of wastewater as a replacement culture medium for Scytonema javanicum. The results show that the photosynthetic activity (F_v/F_m) of S. javanicum was inhibited in the undistilled wastewater and was lower than that in distilled water and the culture medium. The lowest Chl-a concentration and the highest concentration in BG11₀ were found in distilled wastewater. However, there was no difference in the biomass (dry weight) between the undistilled wastewater and BG11₀ at the end of the experiment. After long-term dry storage of the biomass collected after cultivation, there was no difference in the photosynthetic recovery between S. javanicum cultivated in undistilled wastewater and that cultivated in BG11₀. Accordingly, although wastewater depressed the Chl-a content, it did not affect the biomass accumulation and subsequent photosynthetic recovery after long-term storage. The results reveal the significant potential of cultivating sand-consolidating cyanobacterium in wastewater and using this technology as a new nutrient redistribution method in human settlements and desert areas.

Quantitative models of nitrogen-fixing organisms

Nitrogen-fixing organisms are of importance to the environment, providing bioavailable nitrogen to the biosphere. Quantitative models have been used to complement the laboratory experiments and in situ measurements, where such evaluations are difficult or costly. Here, we review the current state of the quantitative modeling of nitrogen-fixing organisms and ways to enhance the bridge between theoretical and empirical studies.

Effects of ambient temperature on the redistribution efficiency of nutrients by desert cyanobacteria- Scytonema javanicum

Cultures of Scytonema javanicum obtained from artificial medium are used to control desertification, and through the effective redistribution of nutrients, related environmental problems can be alleviated. Wastewater is considered to be a potential alternative medium for S. javanicum. However, the effect of temperature on the nutrient redistribution ability of S. javanicum cultured in wastewater has rarely been considered. Therefore, this study explores the effect of temperature on S. javanicum in wastewater. The results showed that a sufficient temperature increase (from 25 °C to 30 °C) increased the photosynthetic activity of photosynthetic system II (PSII), accelerated the accumulation rate of S. javanicum biomass, and improved the removal efficiency of nutrients in wastewater. However, an increasing temperature caused a decrease in the final accumulated biomass. When the temperature was above 35 °C, the ratio of the variable to maximal fluorescence (Fv/Fm) of S. javanicum decreased, thus, causing damage to PSII. The average Fv/Fm at 35 °C and 40 °C decreased by 10.49% and 72.37%, respectively, compared to that at 25 °C. By analysing the chlorophyll fluorescence induction kinetics (OJIP) curve after 30 days, the P phase at 30 °C increased by 15.47% relative to that at 25 °C, whereas that at 35 °C and 40 °C decreased by 45.54% and 86.37%, respectively. In particular, at 40 °C, the O-J-I-P phase transformed into the O-J (J = I = P) phase, which caused irreversible damage to the PSII of S. javanicum. Comprehensive scores were determined using the entropy weight method and revealed that 30 °C was the optimal temperature for the wastewater culture of S. javanicum. This temperature improved the biomass accumulation rate and wastewater transfer efficiency. These results provide a scientific basis for improving the efficiency of the coupling technology of wastewater treatment and desert algal cultivation.