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Albaqami FF, Sahib AS, Alharthy KM, Altharawi A, Alshahrani MY, Jawad MA, Suliman M, Ahmad I. A phenanthroline-based erbium (III) complex: molecular docking, DNA/BSA -binding and biological evaluation. J Biomol Struct Dyn 2024:1-13. [PMID: 38174386 DOI: 10.1080/07391102.2023.2300130] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2023] [Accepted: 12/20/2023] [Indexed: 01/05/2024]
Abstract
With the help of both theoretical as well as experimental research, in vitro binding research with CT-DNA (calf thymus) and BSA (bovine serum albumin) were carefully examined to figure out the chemotherapeutic and pharmacokinetic facets of the Erbium complex, which contains 1,10-phenanthroline (Phen). The binding characteristics and the mechanism of complex's interaction with DNA as well as the protein were determined utilizing fluorescence quenching method. Findings indicated that the complex's interaction with DNA via groove binding into DNA's minor grooves, with their binding constants falling within the 104 M-1 range. Furthermore, thermodynamic characteristics and the fluorescence emission of the tryptophan residues of the protein were obtained through fluorescence quenching studies at different temperatures. According to the results of the binding constants, the protein's interactions with the Er- complex were moderate, demonstrating that the compound may be transported effectively by the protein. Molecular docking results supported that of the experimental research. The HeLa and MCF-7 cancer cell lines, along with the normal human fibroblast cell line, were used in an MTT assay evaluation of the Er-complex cytotoxicity. The Er-complex displayed a selective inhibitory effect on the proliferation of different cancer cells.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Faisal F Albaqami
- Pharmacology and Toxicology Department, College of Pharmacy, Prince Sattam bin Abdulaziz University, AlKharj, Saudi Arabia
| | - Ameer S Sahib
- Department of Pharmacy, Al- Mustaqbal University College, Hilla, Iraq
| | - Khalid M Alharthy
- Pharmacology and Toxicology Department, College of Pharmacy, Prince Sattam bin Abdulaziz University, AlKharj, Saudi Arabia
| | - Ali Altharawi
- Department of Pharmaceutical Chemistry, College of Pharmacy, Prince Sattam Bin Abdulaziz University, Al-Kharj, Saudi Arabia
| | - Mohammad Y Alshahrani
- Department of Clinical Laboratory Sciences, College of Applied Medical Sciences, King Khalid University, Abha, Saudi Arabia
| | - Mohammed Abed Jawad
- Department of Medical Laboratories Technology, Al-Nisour University College, Iraq
| | - Muath Suliman
- Department of Clinical Laboratory Sciences, College of Applied Medical Sciences, King Khalid University, Abha, Saudi Arabia
| | - Irfan Ahmad
- Department of Clinical Laboratory Sciences, College of Applied Medical Sciences, King Khalid University, Abha, Saudi Arabia
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Rastogi SK, Ciliberto VC, Trevino MZ, Campbell BA, Brittain WJ. Green Approach Toward Triazole Forming Reactions for Developing Anticancer Drugs. Curr Org Synth 2024; 21:380-420. [PMID: 37157212 DOI: 10.2174/1570179420666230508125144] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2022] [Revised: 03/01/2023] [Accepted: 03/15/2023] [Indexed: 05/10/2023]
Abstract
Compounds containing triazole have many significant applications in the dye and ink industry, corrosion inhibitors, polymers, and pharmaceutical industries. These compounds possess many antimicrobial, antioxidant, anticancer, antiviral, anti-HIV, antitubercular, and anticancer activities. Several synthetic methods have been reported for reducing time, minimizing synthetic steps, and utilizing less hazardous and toxic solvents and reagents to improve the yield of triazoles and their analogues synthesis. Among the improvement in methods, green approaches towards triazole forming biologically active compounds, especially anticancer compounds, would be very important for pharmaceutical industries as well as global research community. In this article, we have reviewed the last five years of green chemistry approaches on click reaction between alkyl azide and alkynes to install 1,2,3-triazole moiety in natural products and synthetic drug-like molecules, such as in colchicine, flavanone cardanol, bisphosphonates, thiabendazoles, piperazine, prostanoid, flavonoid, quinoxalines, C-azanucleoside, dibenzylamine, and aryl-azotriazole. The cytotoxicity of triazole hybrid analogues was evaluated against a panel of cancer cell lines, including multidrug-resistant cell lines.
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Affiliation(s)
- Shiva K Rastogi
- Department of Chemistry and Biochemistry, Texas State University, 601 University Drive, San Marcos, TX, 78666, USA
| | - Veronica C Ciliberto
- Department of Chemistry and Biochemistry, Texas State University, 601 University Drive, San Marcos, TX, 78666, USA
| | - Monica Z Trevino
- Department of Chemistry and Biochemistry, Texas State University, 601 University Drive, San Marcos, TX, 78666, USA
| | - Brooke A Campbell
- Department of Chemistry and Biochemistry, Texas State University, 601 University Drive, San Marcos, TX, 78666, USA
| | - William J Brittain
- Department of Chemistry and Biochemistry, Texas State University, 601 University Drive, San Marcos, TX, 78666, USA
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Thanoon RD, Ibadi EA, Ahmad I, Alamir HTA, Alwan M, Hashim FS, Khaled DW, Alkhafaji AT, Asiri M, Alsaalamy A. Experimental and theoretical investigations of Erbium complex: DNA/BSA interaction, anticancer and antibacterial studies. Front Chem 2023; 11:1266520. [PMID: 37701051 PMCID: PMC10493310 DOI: 10.3389/fchem.2023.1266520] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2023] [Accepted: 08/14/2023] [Indexed: 09/14/2023] Open
Abstract
To assess the biological potential of an Er complex that contains a 2,2'-bipyridine ligand, various techniques such as multispectral and molecular modeling procedures were utilized to examine its DNA-binding ability, BSA binding affinity, antimicrobial effects, and anticancer properties. By analyzing fluorescent information and employing the vant' Hoff equation, important parameters such as the innate docking coefficient (Kb), Stern-Volmer coefficient (KSV), and thermodynamic properties including modifications in liberated energy (ΔG°), enthalpy (∆H°), and entropy (∆S°) were determined. The trial findings suggest that the compound can bind to DNA, primarily through groove binding. Additionally, the engagement between the Er compound and the protein BSA was examined using emission spectroscopy technique, revealing a powerful binding affinity between the compound and BSA. The Er complex binds to BSA primarily via hydrogen links and van der Waals forces, as indicated by the adverse values of ΔH° and ∆S°. Through a static quenching process, the complex significantly reduces the intrinsic fluorescence of BSA. Molecular binding calculations and rivalrous binding trials confirm that this compound dock to hydrophobic remains found in site III of BSA. Additionally, the Er complex demonstrates promising results in terms of its anticancer and antimicrobial activities based on screening tests.
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Affiliation(s)
- Raid D. Thanoon
- Department of Medical Biochemical Analysis, Cihan University-Erbil, Kurdistan Region, Iraq
| | - Emam Atiyah Ibadi
- Department of Pharmacy, Al-Mustaqbal University College, Babylon, Iraq
| | - Irfan Ahmad
- Department of Clinical Laboratory Sciences, College of Applied Medical Sciences, King Khalid University, Abha, Saudi Arabia
| | | | - Marim Alwan
- Medical Lab Techniques, College of Medical Technology, Al-Farahidi University, Baghdad, Iraq
| | - Furqan S. Hashim
- Department of Medical Laboratories Technology, Al-Nisour University College, Baghdad, Iraq
| | | | | | - Mohammed Asiri
- Department of Clinical Laboratory Sciences, College of Applied Medical Sciences, King Khalid University, Abha, Saudi Arabia
| | - Ali Alsaalamy
- College of Technical Engineering, Imam Ja’afar Al‐Sadiq University, Baghdad, Iraq
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Kaur N. Insight into the binding interactions of fluorenone-pendent Schiff base with calf thymus DNA. Anal Biochem 2023:115216. [PMID: 37353067 DOI: 10.1016/j.ab.2023.115216] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2023] [Revised: 06/15/2023] [Accepted: 06/15/2023] [Indexed: 06/25/2023]
Abstract
A novel fluorenone appended Schiff base (L) has been synthesized and utilized for studying the binding interactions with Calf Thymus DNA (ct-DNA). The mechanism of binding with ct-DNA was explored by employing various spectroscopic techniques viz. UV-Vis absorption spectroscopy, fluorescence emission spectroscopy, gel-electrophoresis, circular dichroism (CD), melting studies, viscosity arrays and molecular modelling methodology. The interpretation of UV-vis absorbance spectra pointed to binding of L within minor groove of ct-DNA with the binding constant of Kb = 0.15 × 104 M-1. Dye-displacement studies with Rhodamine-B (RhB) and Ethylene Bromide (EB) in fluorescence spectroscopy verified the groove binding mode of interaction between L and ct-DNA. Melting studies, circular dichroism, and viscosity studies further elucidated the binding modes of L with ct-DNA. Thermodynamic variable measurements taken at various temperatures such as ΔG⁰, ΔH⁰, and ΔS⁰ revealed that hydrophobic forces played a significant role in the binding process. The meticulous computational interaction demonstrated by molecular docking confirmed the minor groove binding of L with ct-DNA.
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Affiliation(s)
- Navneet Kaur
- Department of Chemistry, Panjab University, Chandigarh, 160014, India.
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Sharifi-Rad A, Amiri-Tehranizadeh Z, Talebi A, Nosrati N, Medalian M, Pejhan M, Hamzkanloo N, Saberi MR, Mokaberi P, Chamani J. Multi spectroscopic and molecular simulation studies of propyl acridone binding to calf thymus DNA in the presence of electromagnetic force. BIOIMPACTS : BI 2023; 13:5-16. [PMID: 36817002 PMCID: PMC9923809 DOI: 10.34172/bi.2022.23592] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/02/2021] [Revised: 04/07/2021] [Accepted: 04/10/2021] [Indexed: 01/09/2023]
Abstract
Introduction: Here, the interaction behavior between propyl acridones (PA) and calf thymus DNA (ct-DNA) has been investigated to attain the features of the binding behavior of PA with ct-DNA, which includes specific binding sites, modes, and constants. Furthermore, the effects of PA on the conformation of ct-DNA seem to be quite significant for comprehending the medicine's mechanism of action and pharmacokinetics. Methods: The project was accomplished through means of absorbance studies, fluorescence spectroscopy, circular dichroism, viscosity measurement, thermal melting, and molecular modeling techniques. Results: The intercalation of PA has been suggested by fluorescence quenching and viscosity measurements results while the thermal melting and circular dichroism studies have confirmed the thermal stabilization and conformational changes that seem to be associated with the binding. The binding constants of ct-DNA-PA complex, in the absence and presence of EMF, have been evaluated to be 6.19 × 104 M-1 and 2.95 × 104 M-1 at 298 K, respectively. In the absence of EMF, the ∆H0 and ∆S0 values that occur in the interaction process of PA with ct-DNA have been measured to be -11.81 kJ.mol-1 and 51.01 J.mol-1K-1, while in the presence of EMF they were observed to be -23.34 kJ.mol-1 and 7.49 J.mol-1K-1, respectively. These numbers indicate the involvement of multiple non-covalent interactions in the binding procedure. In a parallel study, DNA-PA interactions have been monitored by molecular dynamics simulations; their results have demonstrated DNA stability with increasing concentrations of PA, as well as calculated bindings of theoretical ΔG0. Conclusion: The complex formation between PA and ct-DNA has been investigated in the presence and absence of EMF through the multi spectroscopic techniques and MD simulation. These findings have been observed to be parallel to the results of KI and NaCl quenching studies, as well as the competitive displacement with EB and AO. According to thermodynamic parameters, electrostatic interactions stand as the main energy that binds PA to ct-DNA. Regarding the cases that involve the Tm of ct-DNA, EMF has proved to increase the stability of binding between PA and ct-DNA.
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Affiliation(s)
- Atena Sharifi-Rad
- Department of Biology, Faculty of Sciences, Mashhad Branch, Islamic Azad University, Mashhad, Iran
| | - Zeinab Amiri-Tehranizadeh
- Department of Medicinal Chemistry, School of Pharmacy, Mashhad University of Medical Sciences, Mashhad, Iran
| | - Atiye Talebi
- Department of Biology, Faculty of Sciences, Mashhad Branch, Islamic Azad University, Mashhad, Iran
| | - Niknaz Nosrati
- Department of Biology, Faculty of Sciences, Mashhad Branch, Islamic Azad University, Mashhad, Iran
| | - Morvarid Medalian
- Department of Biology, Faculty of Sciences, Mashhad Branch, Islamic Azad University, Mashhad, Iran
| | - Mahtab Pejhan
- Department of Biology, Faculty of Sciences, Mashhad Branch, Islamic Azad University, Mashhad, Iran
| | - Nazanin Hamzkanloo
- Department of Biology, Faculty of Sciences, Mashhad Branch, Islamic Azad University, Mashhad, Iran
| | - Mohammad Reza Saberi
- Department of Medicinal Chemistry, School of Pharmacy, Mashhad University of Medical Sciences, Mashhad, Iran
| | - Parisa Mokaberi
- Department of Biology, Faculty of Sciences, Mashhad Branch, Islamic Azad University, Mashhad, Iran
| | - Jamshidkhan Chamani
- Department of Biology, Faculty of Sciences, Mashhad Branch, Islamic Azad University, Mashhad, Iran,Corresponding author: Jamshidkhan Chamani, ,
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Sehrawat H, Kumar N, Panchal S, Kumar L, Chandra R. Imperative persistent interaction analysis of anticancer noscapine-ionic liquid with calf thymus DNA. Int J Biol Macromol 2022; 220:415-425. [PMID: 35985396 DOI: 10.1016/j.ijbiomac.2022.08.106] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2022] [Revised: 08/10/2022] [Accepted: 08/15/2022] [Indexed: 11/25/2022]
Abstract
In this study, we have shown the interaction between opium poppy alkaloid noscapine-based ionic liquid [Pip-Nos]OTf and ct-DNA using UV-visible absorption spectroscopy, fluorescence spectroscopy, CD, and computational studies. The absorption spectra showed a hypochromic shift with no shift in the absorption maxima suggesting groove or electrostatic binding. Fluorescence spectra showed an enhancement in fluorescence emission suggesting that the probable mode of binding should be groove binding. Ethidium bromide (EB) competitive and Ionic strength study showed the absence of intercalative and electrostatic modes of interaction. Further, CD analysis of ct-DNA suggested a groove binding mode of interaction of [Pip-Nos]OTf with ct-DNA. [Pip-Nos]OTf displayed a strong binding with the target ct-DNA with a molecular docking score of -41.47 kJ/mol with all 3D coordinates and full conformation. Also, molecular binding contact analyses depicted the stable binding of drug and ct-DNA with potential hydrogen bonds and hydrophobic interactions. The structural superimposition dynamics analysis showed the stable binding of [Pip-Nos]OTf with the ct-DNA model through RMSD statistics. Moreover, the ligand interaction calculations revealed the involvement of large binding energy along with a high static number of molecular forces including the hydrogen bonds and hydrophobic interactions in their complexation. These significant results report the potency of [Pip-Nos]OTf and its important futuristic role in cancer therapeutics.
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Affiliation(s)
- Hitesh Sehrawat
- Drug Discovery & Development Laboratory, Department of Chemistry, University of Delhi, Delhi 110007, India.
| | - Neeraj Kumar
- Drug Discovery & Development Laboratory, Department of Chemistry, University of Delhi, Delhi 110007, India; Northwestern University, Feinberg School of Medicine, Department of Neurology, Chicago, IL 60611, USA
| | - Sagar Panchal
- Drug Discovery & Development Laboratory, Department of Chemistry, University of Delhi, Delhi 110007, India
| | - Loveneesh Kumar
- Drug Discovery & Development Laboratory, Department of Chemistry, University of Delhi, Delhi 110007, India
| | - Ramesh Chandra
- Drug Discovery & Development Laboratory, Department of Chemistry, University of Delhi, Delhi 110007, India; Dr. B. R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi 110007, India; Institute of Nano Medical Sciences (INMS), University of Delhi, Delhi 110007, India.
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Bodapati ATS, Sahoo BK, Reddy RS, Lavanya K, Madku SR. Deciphering the nature of binding of dexlansoprazole with DNA: Biophysical and docking approaches. Int J Biol Macromol 2022; 217:1027-1036. [PMID: 35907469 DOI: 10.1016/j.ijbiomac.2022.07.177] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2022] [Revised: 07/21/2022] [Accepted: 07/22/2022] [Indexed: 11/30/2022]
Abstract
Drugs, in general, exhibit their pharmacological activity in binding with intracellular targets. Numerous anticancer and antibacterial drugs target DNA as one of their primary intracellular targets. Dexlansoprazole (DLP) is a heterocyclic compound containing benzimidazole moiety and a proton pump inhibitor used to treat gastroesophageal reflux disease. The interaction of dexlansoprazole with calf thymus DNA (ct-DNA) has been studied using biophysical methods. The UV-Visible studies revealed a binding constant of 2.15 ± 0.3 × 104 M-1 which is close to the value of 2.44 ± 0.3 × 104 M-1 obtained from the fluorescence studies. Competitive displacement studies using the fluorescence spectroscopic method with ethidium bromide and Hoechst as DNA markers suggested the groove binding mode of DLP in ct-DNA. The groove binding mode of DLP in ct-DNA was complemented by the results of viscosity and DNA melting studies. Further studies on the effect of ionic strength and potassium iodide on DLP binding with ct-DNA supported the observed binding mode. Circular dichroism studies reflected no significant conformational variation in ct-DNA after the interaction. The binding mode obtained from the experimental studies was corroborated by the molecular docking studies that showed the position of DLP in the minor groove of ct-DNA along with the receptor interface restudies involved in the interaction.
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Affiliation(s)
- Anna Tanuja Safala Bodapati
- Chemistry Division, BS&H Department, BVRIT Hyderabad, College of Engineering for Women, Hyderabad 500090, India; Department of Chemistry, GITAM Deemed to be University, Hyderabad Campus 502329, India
| | - Bijaya Ketan Sahoo
- Department of Chemistry, GITAM Deemed to be University, Hyderabad Campus 502329, India.
| | - Ragaiahgari Srinivas Reddy
- Department of Chemistry, GITAM Deemed to be University, Hyderabad Campus 502329, India; Department of Chemistry, B V Raju Institute of Technology (BVRIT), Narsapur 502313, India
| | - Kandikonda Lavanya
- Department of Chemistry, GITAM Deemed to be University, Hyderabad Campus 502329, India; Department of Chemistry, Gokaraju Rangaraju Institute of Engineering and Technology, Hyderabad 500090, India
| | - Shravya Rao Madku
- Department of Chemistry, GITAM Deemed to be University, Hyderabad Campus 502329, India; Department of Chemistry, St. Francis College for Women, Hyderabad 500016, India
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Majidi S, Aramesh-Boroujeni Z, Moghadam M, Jahani S. Can One Novel Lanthanide Complex and Its Nano-Encapsulated Compounds Afford Advances in Biological Inorganic Chemistry? A Biological Applications Study for Dysprosium (III) Complex and Its Nano-Encapsulated Compounds. COMMENT INORG CHEM 2022. [DOI: 10.1080/02603594.2022.2075859] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- Somayeh Majidi
- Department of Chemistry, Najafabad Branch, Islamic Azad University, Najafabad, Iran
| | | | - Majid Moghadam
- Department of Chemistry, University of Isfahan, Isfahan, Iran
| | - Shohreh Jahani
- Noncommunicable Diseases Research Center, Bam University of Medical Sciences, Bam, Iran
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Jahani S, Aramesh-Boroujeni Z, Noroozifar M. In vitro anticancer and antibacterial activates of the yttrium(III) complex and its nano-carriers toward DNA cleavage and biological interactions with DNA and BSA; An experimental and computational studie. J Trace Elem Med Biol 2021; 68:126821. [PMID: 34315038 DOI: 10.1016/j.jtemb.2021.126821] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/13/2021] [Revised: 06/23/2021] [Accepted: 07/14/2021] [Indexed: 01/16/2023]
Abstract
OBJECTIVES In this research, the biological properties of the yttrium (III) (Y) complex, with 2,9-dimethyl- 1,10-phenanthroline (Me2Phen) ligand, were examined for in vitro fish DNA (FS-DNA)/ bovine serum albumin (BSA) interactions, DNA-cleavage, anticancer and antibacterial activities. METHODS Multi-spectrophotometric techniques and computational calculations were used for the interaction studies of the BSA and FS-DNA with the Y-complex. Absorption and fluorescence spectroscopy methods were used to define thermodynamic parameters, the binding constants (Kb), and the probable binding mechanism. Also, the DFT (density functional theory) study and molecular docking calculation of the Y-complex were done. Besides, the nanocarriers of Y-complex (lipid nanoencapsulation (LNEP) and the starch nanoencapsulation (SNEP)), as active anticancer candidates, were prepared. Finally, DNA-cleavage, anticancer, and antibacterial activities of this complex were investigated. RESULTS The absorption and fluorescence measurements were exhibited that the Y-complex has a high binding affinity to FS-DNA and BSA through a static mechanism. The negative thermodynamic parameter values for both DNA/BSA binding were confirmed that the hydrogen bonds and van der Waals forces played an essential role in the spontaneous bonding procedure. The site marker competitive studies for BSA confirmed that the Y-complex bonds to the sub-domain IB of protein (site III) on BSA, which was entirely agreement by docking calculation. The complex has displayed efficient DNA cleavage, antifungal and antibacterial activities. The anticancer activity of the Y-complex and its starch/lipid nano-encapsulated was carried out in cancer cell lines, which exposed considerably high activity. CONCLUSIONS Thus, Y-complex can be transported professionally through BSA in the blood and bonds in the groove of DNA. Base on biological applications of the Y-complex, it can be concluded that this complex and its nanocarriers can suggest as novel anticancer and antibacterial candidates.
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Affiliation(s)
- Shohreh Jahani
- Nano Bioeletrochemistry Research Center, Bam University of Medical Sciences, Bam, Iran
| | | | - Meissam Noroozifar
- Department of Physical and Environmental Sciences, University of Toronto Scarborough 1265 Military Trail, Toronto, Ontario, M1C 1A4, Canada
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Design concepts of half-sandwich organoruthenium anticancer agents based on bidentate bioactive ligands. Coord Chem Rev 2021. [DOI: 10.1016/j.ccr.2021.213950] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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Palmeira-Mello MV, Caballero AB, Lopez-Espinar A, Guedes GP, Caubet A, de Souza AMT, Lanznaster M, Gamez P. DNA-interacting properties of two analogous square-planar cis-chlorido complexes: copper versus palladium. J Biol Inorg Chem 2021; 26:727-740. [PMID: 34453615 PMCID: PMC8437883 DOI: 10.1007/s00775-021-01888-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2021] [Accepted: 07/29/2021] [Indexed: 12/16/2022]
Abstract
Two square-planar coordination compounds, namely [Cu(CPYA)Cl2] (1) and [Pd(CPYA)Cl2] (2), were prepared from the ligand 4-chloro-N-(pyridin-2-ylmethyl)aniline (CPYA) and two chloride salts, and were fully characterized, including by X-ray diffraction. Spectroscopic, electrophoretic and AFM studies revealed that the two isostructural compounds were interacting differently with DNA. In both cases, the initial interaction involves electrostatic contacts of the CPYA ligand in the minor groove (as suggested by molecular docking), but subsequent strong binding occurs with the palladium(II) complex 2, whereas the binding with the copper complex 1 is weaker and concentration dependent. The strong binding of 2 eventually leads to the cleavage of the double strand and the redox activity of 1 allows to oxidatively cleave the biomolecule.
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Affiliation(s)
- Marcos V Palmeira-Mello
- Instituto de Química, Universidade Federal Fluminense, Outeiro S. João Batista S/N, Niterói, RJ, 24020-141, Brazil
- nanoBIC, Departament de Química Inorgànica i Orgànica, Secció Química Inorgànica, Universitat de Barcelona, Martí i Franquès 1-11, 08028, Barcelona, Spain
- Laboratório de Modelagem Molecular and QSAR (ModMolQSAR), Faculdade de Farmácia, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ, Brazil
| | - Ana B Caballero
- nanoBIC, Departament de Química Inorgànica i Orgànica, Secció Química Inorgànica, Universitat de Barcelona, Martí i Franquès 1-11, 08028, Barcelona, Spain.
| | - Aida Lopez-Espinar
- nanoBIC, Departament de Química Inorgànica i Orgànica, Secció Química Inorgànica, Universitat de Barcelona, Martí i Franquès 1-11, 08028, Barcelona, Spain
| | - Guilherme P Guedes
- Instituto de Química, Universidade Federal Fluminense, Outeiro S. João Batista S/N, Niterói, RJ, 24020-141, Brazil
| | - Amparo Caubet
- nanoBIC, Departament de Química Inorgànica i Orgànica, Secció Química Inorgànica, Universitat de Barcelona, Martí i Franquès 1-11, 08028, Barcelona, Spain
| | - Alessandra M Teles de Souza
- Laboratório de Modelagem Molecular and QSAR (ModMolQSAR), Faculdade de Farmácia, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ, Brazil
| | - Mauricio Lanznaster
- Instituto de Química, Universidade Federal Fluminense, Outeiro S. João Batista S/N, Niterói, RJ, 24020-141, Brazil
| | - Patrick Gamez
- nanoBIC, Departament de Química Inorgànica i Orgànica, Secció Química Inorgànica, Universitat de Barcelona, Martí i Franquès 1-11, 08028, Barcelona, Spain
- Institute of Nanoscience and Nanotechnology (IN2UB), Universitat de Barcelona, 08028, Barcelona, Spain
- Catalan Institution for Research and Advanced Studies (ICREA), Passeig Lluís Companys 23, 08010, Barcelona, Spain
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Singhal S, Khanna P, Khanna L. Synthesis, comparative in vitro antibacterial, antioxidant and UV fluorescence studies of bis indole Schiff bases and molecular docking with ct-DNA and SARS-CoV-2 M pro. LUMINESCENCE 2021; 36:1531-1543. [PMID: 34087041 DOI: 10.1002/bio.4098] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2020] [Revised: 04/18/2021] [Accepted: 05/26/2021] [Indexed: 12/17/2022]
Abstract
In this study, synthesis of 15 novel bis indole-based Schiff bases (SBs) 4a-4o was conducted by condensation of 2-(1-aminobenzyl)benzimidazole with symmetrical bis-isatins linked via five alkyl chains (n = 2-6). These were subjected to ADME (absorption, distribution, metabolism and excretion), physiochemical properties, molecular docking, in vitro antibacterial and antioxidant studies. The in silico studies indicated lower toxicity with metabolic stability for nearly all the derivatives proving reliability as drug candidates. The comparative antibacterial study against Staphylococcus aureus and Escherichia coli, also showed a superior inhibition than reference drug and their mono counterparts. The increase in linker alkyl chain length and variation of substituents in indole, further predicted increased inhibition, with maximum value for compound 4o at 50 μg/ml. The in vitro calf thymus DNA (ct-DNA) binding ability of compounds 4c, 4f, 4i, 4l, 4 m, 4n, and 4o was evaluated via ultraviolet-visible and fluorescence spectroscopy techniques. A hyperchromic effect was observed with no apparent wavelength shift which predicted for the groove binding mode. A moderate binding constant for 4o, in fluorescence results, confirms groove binding. The molecular docking of 4o with ct-DNA (PDBID:1BNA) and SARS-CoV-2 Mpro (3CL protease, PDBID:6LU7) prove its efficacy as potential DNA binder and antiviral agent.
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Affiliation(s)
- Sugandha Singhal
- University School of Basic and Applied Sciences, Guru Gobind Singh Indraprastha University, New Delhi, India
| | - Pankaj Khanna
- Department of Chemistry, Acharya Narendra Dev College, University of Delhi, New Delhi, India
| | - Leena Khanna
- University School of Basic and Applied Sciences, Guru Gobind Singh Indraprastha University, New Delhi, India
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Minagawa M, Shirato M, Toya M, Sato M. Dual Impact of a Benzimidazole Resistant β-Tubulin on Microtubule Behavior in Fission Yeast. Cells 2021; 10:1042. [PMID: 33925026 PMCID: PMC8145593 DOI: 10.3390/cells10051042] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2021] [Revised: 04/22/2021] [Accepted: 04/24/2021] [Indexed: 11/17/2022] Open
Abstract
The cytoskeleton microtubule consists of polymerized αβ-tubulin dimers and plays essential roles in many cellular events. Reagents that inhibit microtubule behaviors have been developed as antifungal, antiparasitic, and anticancer drugs. Benzimidazole compounds, including thiabendazole (TBZ), carbendazim (MBC), and nocodazole, are prevailing microtubule poisons that target β-tubulin and inhibit microtubule polymerization. The molecular basis, however, as to how the drug acts on β-tubulin remains controversial. Here, we characterize the S. pombe β-tubulin mutant nda3-TB101, which was previously isolated as a mutant resistance to benzimidazole. The mutation site tyrosine at position 50 is located in the interface of two lateral β-tubulin proteins and at the gate of a putative binging pocket for benzimidazole. Our observation revealed two properties of the mutant tubulin. First, the dynamics of cellular microtubules comprising the mutant β-tubulin were stabilized in the absence of benzimidazole. Second, the mutant protein reduced the affinity to benzimidazole in vitro. We therefore conclude that the mutant β-tubulin Nda3-TB101 exerts a dual effect on microtubule behaviors: the mutant β-tubulin stabilizes microtubules and is insensitive to benzimidazole drugs. This notion fine-tunes the current elusive molecular model regarding binding of benzimidazole to β-tubulin.
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Affiliation(s)
- Mamika Minagawa
- Laboratory of Cytoskeletal Logistics, Department of Life Science and Medical Bioscience, Graduate School of Advanced Science and Engineering, Waseda University, 2-2 Wakamatsucho, Shinjuku-ku, Tokyo 162-8480, Japan; (M.M.); (M.S.); (M.T.)
| | - Minamo Shirato
- Laboratory of Cytoskeletal Logistics, Department of Life Science and Medical Bioscience, Graduate School of Advanced Science and Engineering, Waseda University, 2-2 Wakamatsucho, Shinjuku-ku, Tokyo 162-8480, Japan; (M.M.); (M.S.); (M.T.)
| | - Mika Toya
- Laboratory of Cytoskeletal Logistics, Department of Life Science and Medical Bioscience, Graduate School of Advanced Science and Engineering, Waseda University, 2-2 Wakamatsucho, Shinjuku-ku, Tokyo 162-8480, Japan; (M.M.); (M.S.); (M.T.)
- Faculty of Science and Engineering, Global Center for Science and Engineering, Waseda University, 3-4-1 Okubo, Shinjuku-ku, Tokyo 169-8555, Japan
- Institute for Advanced Research of Biosystem Dynamics, Waseda Research Institute for Science and Engineering, Graduate School of Advanced Science and Engineering, Waseda University, 3-4-1 Okubo, Shinjuku-ku, Tokyo 169-8555, Japan
| | - Masamitsu Sato
- Laboratory of Cytoskeletal Logistics, Department of Life Science and Medical Bioscience, Graduate School of Advanced Science and Engineering, Waseda University, 2-2 Wakamatsucho, Shinjuku-ku, Tokyo 162-8480, Japan; (M.M.); (M.S.); (M.T.)
- Institute for Advanced Research of Biosystem Dynamics, Waseda Research Institute for Science and Engineering, Graduate School of Advanced Science and Engineering, Waseda University, 3-4-1 Okubo, Shinjuku-ku, Tokyo 169-8555, Japan
- Institute for Medical-Oriented Structural Biology, Waseda University, 2-2 Wakamatsucho, Shinjuku-ku, Tokyo 162-8480, Japan
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14
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Shahabadi N, Farhadi R. Multispectroscopic and molecular docking studies on DNA binding of guaifenesin drug. NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS 2021; 40:317-335. [PMID: 33463400 DOI: 10.1080/15257770.2021.1872793] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
The interaction mechanism of guaifenesin drug; (RS)-3-(2-methoxyphenoxy)propane-1,2-diol; and calf thymus DNA was characterized by multiple spectroscopic and molecular docking approaches. The changes in drug electronic absorption with increasing DNA concentration and also the observed significant quenching of guaifenesin emission in the presence of DNA proved the complex formation between guaifenesin and DNA during the interactions. Both the binding constant and thermodynamic parameters for the interaction have been calculated in 283, 298, and 310 K at pH 7.4. The results Δ H 0 = 17.87 kJ/mol and Δ S 0 = 143.31 J/mol.K confirmed the role of hydrophobic force in the guaifenesin-DNA interaction. Circular dichroism study showed that guaifenesin causes decrease in the negative band of CT-DNA and at the same time the positive band increases which indicated the transition of DNA conformation from B to A. KI quenching experiment specifies that guaifenesin binds to DNA via nonintercalative mode. The competitive studies based on known Hoechst 33258 and methylene blue probes proved the groove binding mode in guaifenesin-DNA adduct. Further, full agreement of molecular docking simulation with the experimental results of binding constant and interaction mode, support high accuracy of the results.
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Affiliation(s)
- Nahid Shahabadi
- Faculty of Chemistry, Department of Inorganic Chemistry, Razi University, Kermanshah, Iran.,Medical Biology Research Center (MBRC), Kermanshah University of Medical Sciences, Kermanshah, Iran
| | - Reza Farhadi
- Faculty of Chemistry, Department of Inorganic Chemistry, Razi University, Kermanshah, Iran
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15
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Valente JFA, Queiroz JA, Sousa F. Dilemma on plasmid DNA purification: binding capacity vs selectivity. J Chromatogr A 2020; 1637:461848. [PMID: 33421679 DOI: 10.1016/j.chroma.2020.461848] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2020] [Revised: 12/21/2020] [Accepted: 12/23/2020] [Indexed: 10/22/2022]
Abstract
Plasmid DNA chromatography is a powerful field in constant development and evolution. The use of this technique is considered mandatory in the production of an efficient and safe formulation to be applied for plasmid-mediated gene therapy. Concerning this, the search for an ideal chromatographic support/ligand combination motivated scientist to pursue a continuous improvement on the plasmid chromatography performance, looking for a progression on the ligands and supports used. The present review explores the different approaches used over time to purify plasmid DNA, ambitioning both high recovery and high purity levels. Overall, it is presented a critical discussion relying on the relevance of the binding capacity versus selectivity of the supports.
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Affiliation(s)
- J F A Valente
- CICS-UBI - Health Sciences Research Centre, Universidade da Beira Interior, Avenida Infante D. Henrique, 6200-506Covilhã, Portugal; CDRSP-IPLEIRIA - Centre for Rapid and Sustainable Product Development, Instituto Politécnico de Leiria, Rua de Portugal - Zona Industrial, 2430-028Marinha Grande, Portugal
| | - J A Queiroz
- CICS-UBI - Health Sciences Research Centre, Universidade da Beira Interior, Avenida Infante D. Henrique, 6200-506Covilhã, Portugal
| | - F Sousa
- CICS-UBI - Health Sciences Research Centre, Universidade da Beira Interior, Avenida Infante D. Henrique, 6200-506Covilhã, Portugal.
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16
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Li X, Yang L, Wang Y, Du Z, Mao X, Sun D, Liu J, Zhou Y, Xu X. Studies on binding of single-stranded DNA with reduced graphene oxide-silver nanocomposites. IET Nanobiotechnol 2020; 14:308-313. [PMID: 32463021 PMCID: PMC8676041 DOI: 10.1049/iet-nbt.2019.0377] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2020] [Accepted: 02/21/2020] [Indexed: 11/20/2022] Open
Abstract
The binding reaction of reduced graphene oxide-silver nanocomposites (rGO-AgNCs) with calf thymus single-stranded DNA (ssDNA) was studied by ultraviolet-visible absorption, fluorescence spectroscopy and circular dichroism (CD), using berberine hemisulphate (BR) dye as a fluorescence probe. The absorbance of ssDNA increases, but the fluorescence intensity is quenched with the addition of rGO-AgNCs. The binding of rGO-AgNCs with ssDNA was able to increase the quenching effects of BR and ssDNA, and induce the changes in CD spectra. All of the evidence indicated that there was a relatively strong interaction between ssDNA and rGO-AgNCs. The data obtained from fluorescence experiments revealed that the quenching process of ssDNA caused by rGO-AgNCs is primarily due to complex formation, i.e. static quenching. The increasing trend of the binding equilibrium constant (Ka) with rising temperature indicated that the binding process was an endothermic reaction. The calculated thermodynamic parameters showed that the binding process was thermodynamically spontaneous, and hydrophobic association played predominant roles in the binding of ssDNA to the surface of rGO-AgNCs.
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Affiliation(s)
- Xi Li
- Department of Clinical Laboratory, The First Affiliated Hospital of Guangzhou University of Chinese Medicine, Guangzhou 510006, Guangdong Province, People's Republic of China
| | - Linqing Yang
- Program for Scientific Research Innovation Team in Precision Medicine of Gynecologic Oncology, Affiliated Hospital of Jining Medical University, Jining 272067, Shandong Province, People's Republic of China
| | - Yunfei Wang
- Program for Scientific Research Innovation Team in Precision Medicine of Gynecologic Oncology, Affiliated Hospital of Jining Medical University, Jining 272067, Shandong Province, People's Republic of China
| | - Zhongyu Du
- College of Basic Medical, Jining Medical University, Jining 272067, Shandong Province, People's Republic of China
| | - Xuyan Mao
- College of Basic Medical, Jining Medical University, Jining 272067, Shandong Province, People's Republic of China
| | - Dezhi Sun
- College of Chemistry and Chemical Engineering, Liaocheng University, Liaocheng 252059, Shandong Province, People's Republic of China
| | - Jun Liu
- College of Basic Medical, Jining Medical University, Jining 272067, Shandong Province, People's Republic of China
| | - Yu Zhou
- School of Public Health, Jining Medical College, Jining 272067, Shandong Province, People's Republic of China
| | - Xiangyu Xu
- College of Basic Medical, Jining Medical University, Jining 272067, Shandong Province, People's Republic of China.
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17
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Cunha BN, Luna-Dulcey L, Plutin AM, Silveira RG, Honorato J, Cairo RR, de Oliveira TD, Cominetti MR, Castellano EE, Batista AA. Selective Coordination Mode of Acylthiourea Ligands in Half-Sandwich Ru(II) Complexes and Their Cytotoxic Evaluation. Inorg Chem 2020; 59:5072-5085. [DOI: 10.1021/acs.inorgchem.0c00319] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- Beatriz N. Cunha
- Departamento de Química, Universidade Federal de São Carlos—UFSCar, Rodovia Washington Luís KM 235, CP 676, 13561-901 São Carlos, SP, Brazil
- Instituto Federal Goiano—IFGoiano, Campus Ceres, Rodovia GO-154 KM 03, CP 51, 76300-000 Ceres, GO, Brazil
| | - Liany Luna-Dulcey
- Departamento de Gerontologia, Universidade Federal de São Carlos—UFSCar, Rodovia Washington Luís KM 235, CP 676, 13561-901 São Carlos, SP, Brazil
| | - Ana M. Plutin
- Laboratório de Síntesis Orgánica, Facultad de Química, Universidad dela Habana—UH, Habana 10400, Cuba
| | - Rafael G. Silveira
- Departamento de Química, Universidade Federal de São Carlos—UFSCar, Rodovia Washington Luís KM 235, CP 676, 13561-901 São Carlos, SP, Brazil
- Instituto Federal Goiano—IFGoiano, Campus Ceres, Rodovia GO-154 KM 03, CP 51, 76300-000 Ceres, GO, Brazil
| | - João Honorato
- Departamento de Química, Universidade Federal de São Carlos—UFSCar, Rodovia Washington Luís KM 235, CP 676, 13561-901 São Carlos, SP, Brazil
| | - Raúl R. Cairo
- Laboratório de Síntesis Orgánica, Facultad de Química, Universidad dela Habana—UH, Habana 10400, Cuba
| | - Tamires D. de Oliveira
- Departamento de Química, Universidade Federal de São Carlos—UFSCar, Rodovia Washington Luís KM 235, CP 676, 13561-901 São Carlos, SP, Brazil
| | - Marcia R. Cominetti
- Departamento de Gerontologia, Universidade Federal de São Carlos—UFSCar, Rodovia Washington Luís KM 235, CP 676, 13561-901 São Carlos, SP, Brazil
| | - Eduardo E. Castellano
- Departamento de Física e Informática, Instituto de Física de São Carlos, Universidade de São Paulo—USP, CP 369, 13560-970 São Carlos, SP, Brazil
| | - Alzir A. Batista
- Departamento de Química, Universidade Federal de São Carlos—UFSCar, Rodovia Washington Luís KM 235, CP 676, 13561-901 São Carlos, SP, Brazil
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18
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Khan S, Ahmad R, Naseem I. Elucidating the interaction of aminophylline with calf thymus DNA using multispectroscopic and molecular docking approach. J Biomol Struct Dyn 2020; 39:970-976. [PMID: 31994973 DOI: 10.1080/07391102.2020.1722240] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Aminophylline (Am) is a methylxanthine compound clinically applied for chronic lung diseases like asthma, bronchitis or emphysema. Chemically, it comprises theophylline and ethylenediamine in a ratio 2:1. For the widening of the therapeutic window of any class of drug or for the designing of the newer therapeutic compound, an insight into the binding mechanics of available drugs with DNA is quite imperative. In view of that, here in this study we have investigated binding mechanics of aminophylline molecule with calf thymus DNA (Ct-DNA) using various spectroscopic techniques as well as molecular docking approach. Spectral analysis employing UV-visible and fluorescence approach confirmed the formation of aminophylline-Ct-DNA complex. The binding constant was calculated as 3.5 × 104 M-1 with 0.90 as the value of binding site suggestive of minor groove binding mode of aminophylline. The groove binding mode was further confirmed through spectrofluorimetric experiments like competitive displacement assay employing ethidium bromide, hoechst and rhodamine 6 G dyes as well as iodide quenching studies. The circular dichroic spectral evaluation and molecular docking study finally validated the minor groove binding mode of aminophylline with binding energy calculated as -4.5 Kcal/mol.
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Affiliation(s)
- Saniyya Khan
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh, Uttar Pradesh, India
| | - Rizwan Ahmad
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh, Uttar Pradesh, India
| | - Imrana Naseem
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh, Uttar Pradesh, India
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19
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El Bourakadi K, Mekhzoum MEM, Saby C, Morjani H, Chakchak H, Merghoub N, Qaiss AEK, Bouhfid R. Synthesis, characterization and in vitro anticancer activity of thiabendazole-derived 1,2,3-triazole derivatives. NEW J CHEM 2020. [DOI: 10.1039/c9nj05685h] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Abstract
Thiabendazolium salts with 1,2,3-triazole motifs were synthesized and characterized; they exhibit good cytotoxic activity.
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Affiliation(s)
- Khadija El Bourakadi
- Composites and Nanocomposites Center, Moroccan Foundation for Advanced Science
- Innovation and Research (MAScIR)
- Rabat Design Center
- Rue Mohamed El Jazouli
- Madinat El Irfane
| | - Mohamed El Mehdi Mekhzoum
- Composites and Nanocomposites Center, Moroccan Foundation for Advanced Science
- Innovation and Research (MAScIR)
- Rabat Design Center
- Rue Mohamed El Jazouli
- Madinat El Irfane
| | - Charles Saby
- BioSpect Unit
- UFR of Pharmacy of Reims
- 51096 Reims Cedex
- France
| | - Hamid Morjani
- BioSpect Unit
- UFR of Pharmacy of Reims
- 51096 Reims Cedex
- France
| | - Hind Chakchak
- Unités d'Appui Techniques à la Recherche Scientifique (UATRS)/Centre National Pour la Recherche Scientifique et Technique (CNRST)
- 10000 Rabat
- Morocco
| | - Nawal Merghoub
- Green Biotechnology Center
- Moroccan Foundation for Advanced Science
- Innovation and Research (MAScIR)
- Rabat Design Center
- Rue Mohamed Al Jazouli
| | - Abou el kacem Qaiss
- Composites and Nanocomposites Center, Moroccan Foundation for Advanced Science
- Innovation and Research (MAScIR)
- Rabat Design Center
- Rue Mohamed El Jazouli
- Madinat El Irfane
| | - Rachid Bouhfid
- Composites and Nanocomposites Center, Moroccan Foundation for Advanced Science
- Innovation and Research (MAScIR)
- Rabat Design Center
- Rue Mohamed El Jazouli
- Madinat El Irfane
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20
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Aramesh-Boroujeni Z, Jahani S, Khorasani-Motlagh M, Kerman K, Noroozifar M. Parent and nano-encapsulated ytterbium(iii) complex toward binding with biological macromolecules, in vitro cytotoxicity, cleavage and antimicrobial activity studies. RSC Adv 2020; 10:23002-23015. [PMID: 35520322 PMCID: PMC9054636 DOI: 10.1039/d0ra03895d] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2020] [Accepted: 06/04/2020] [Indexed: 01/14/2023] Open
Abstract
To determine the chemotherapeutic and pharmacokinetic aspects of an ytterbium complex containing 2,9-dimethyl-1,10-phenanthroline (Me2Phen), in vitro binding studies were carried out with FS-DNA/BSA by employing multiple biophysical methods and a molecular modeling study. There are different techniques including absorption spectroscopy, fluorescence spectroscopy, circular dichroism studies, viscosity experiments (only in the case of DNA), and competitive experiments used to determine the interaction mode between DNA/BSA and the ytterbium-complex. The results showed that the Yb-complex exhibited a high propensity for the interaction of BSA and DNA via hydrophobic interactions and van der Waals forces. Further, a competitive examination and docking study showed that the interaction site of the ytterbium complex on BSA is site III. The results of docking calculations for DNA/BSA were in good agreement with experimental findings. The complex displays efficient DNA cleavage in the presence of hydrogen peroxide. Moreover, antimicrobial studies of different bacteria and fungi indicated its promising antibacterial activity. In vitro cytotoxicity studies of the Yb-complex, starch nano-encapsulated, and lipid nano-encapsulated were carried out in MCF-7 and A-549 cell lines, which revealed significantly good activity. The results of anticancer activity studies showed that the cytotoxic activity of the Yb-complex was increased when encapsulated with nanocarriers. Based on biological applications of the Yb-complex, it can be concluded that this complex and its nanocarriers can act as novel anticancer and antimicrobial candidates. The biological applications of Yb-complexes including anticancer, antimicrobial and DNA cleavage ability, and their interaction with FS-DNA and BSA were examined.![]()
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Affiliation(s)
- Zahra Aramesh-Boroujeni
- Department of Clinical Laboratory
- AlZahra Hospital
- Isfahan University of Medical Sciences
- Iran
- Young Researchers and Elite Club, Najafabad Branch
| | - Shohreh Jahani
- Nano Bioeletrochemistry Research Center
- Bam University of Medical Sciences
- Bam
- Iran
| | | | - Kagan Kerman
- Department of Physical and Environmental Sciences
- University of Toronto Scarborough
- Toronto
- Canada
| | - Meissam Noroozifar
- Department of Physical and Environmental Sciences
- University of Toronto Scarborough
- Toronto
- Canada
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21
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Asadpour S, Aramesh-Boroujeni Z, Jahani S. In vitro anticancer activity of parent and nano-encapsulated samarium(iii) complex towards antimicrobial activity studies and FS-DNA/BSA binding affinity. RSC Adv 2020; 10:31979-31990. [PMID: 35518188 PMCID: PMC9056537 DOI: 10.1039/d0ra05280a] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2020] [Accepted: 08/11/2020] [Indexed: 11/21/2022] Open
Abstract
Based on the potential anticancer properties of lanthanide complexes, the anticancer activity of the Sm(iii) complex containing a 2,2′-bipyridine ligand (bpy) and its interaction with FS-DNA (Fish-Salmon DNA) and BSA (Bovine Serum Albumin) were examined experimentally and by molecular docking in this paper. Absorption and fluorescence spectroscopic methods were used to define the thermodynamic parameters, binding constant (Kb), and the probable binding mechanism. It was concluded that the Sm complex interacts with FS-DNA through a minor groove with a Kb of 105 M−1. Also, the Kb for the BSA binding at 298 K was found to be 5.89 × 105 M−1, showing relatively a high tendency of the Sm complex to DNA and BSA. Besides, the Sm complex was docked to BSA and DNA by the autodock program. The results of the docking calculations were in good agreement with the experimental examinations. Additionally, the antifungal and antibacterial properties of this complex were investigated. The anticancer tests on the effect of the Sm complex, starch nano-encapsulation, and lipid nano-encapsulation in MCF-7 and A-549 cell lines were performed by the MTT method. It can be observed that the Sm complex and its nanocarriers presented a selective inhibitory effect on various cancer cell growths. The biological properties of the Sm-complex, such as its interaction with FS-DNA and BSA, anticancer, and antimicrobial activities were studied.![]()
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Affiliation(s)
- Saeid Asadpour
- Department of Chemistry
- Faculty of Sciences
- Shahrekord University
- Shahrekord 115
- Iran
| | - Zahra Aramesh-Boroujeni
- Department of Clinical Laboratory
- AlZahra Hospital
- Isfahan University of Medical Sciences
- Iran
- Young Researchers and Elite Club
| | - Shohreh Jahani
- Noncommunicable Diseases Research Center
- Bam University of Medical Sciences
- Bam
- Iran
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22
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Xu L, Zhao J, Liu Z, Wang Z, Yu K, Xing B. Cleavage and transformation inhibition of extracellular antibiotic resistance genes by graphene oxides with different lateral sizes. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019; 695:133932. [PMID: 31756848 DOI: 10.1016/j.scitotenv.2019.133932] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2019] [Revised: 08/13/2019] [Accepted: 08/14/2019] [Indexed: 06/10/2023]
Abstract
Due to excessive consumption of antibiotics, antibiotic resistance genes (ARGs) become a ubiquitous pollutant in aquatic environments. Graphene oxide (GO), an emerging 2D nanomaterial, was used for potential control of ARG contamination in the present work. We systematically investigated the interaction of GOs with Kanamycin resistance gene (aphA)-containing plasmid DNA, and related the inhibition of ARG transformation by GOs. Four GOs with different lateral sizes (1.0, 0.60, 0.17, and 0.08 μm2) were prepared, and defined as GO1.0, GO0.60, GO0.17 and GO0.08. It is found that all the four GOs could effectively intercalate into plasmid DNA, and the intercalation abilities followed the order: GO0.08 > GO0.17 > GO0.60 > GO1.0. Based on circular dichroism (CD) spectrum analysis, all GOs disturbed the base stacking mode and double helix structure of DNA, which is positively related to the intercalation activities of GOs. For GO0.08 at 25 μg/mL, the supercoiled plasmid DNA was partially cleaved, and the nicked and linear structures were observed based on agarose gel electrophoresis analysis. Moreover, the amplification and transformation of aphA gene were both inhibited due to GO-plasmid DNA interactions, and the inhibition was stronger with increasing GO concentrations and smaller lateral sizes. The inhibition of aphA transformation after GO0.08 (25 μg/mL) exposure achieved 50%. The size-dependent interaction of GOs with ARGs-containing plasmid DNA will be useful for guiding the environmental applications of GOs in reducing extracellular ARG transformation.
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Affiliation(s)
- Lina Xu
- Institute of Environmental Processes and Pollution Control, School of Environmental and Civil Engineering, Jiangnan University, Wuxi 214122, China; Institute of Coastal Environmental Pollution Control, Ministry of Education Key Laboratory of Marine Environment and Ecology, Ocean University of China, Qingdao 266100, China
| | - Jian Zhao
- Institute of Coastal Environmental Pollution Control, Ministry of Education Key Laboratory of Marine Environment and Ecology, Ocean University of China, Qingdao 266100, China; Laboratory for Marine Ecology and Environmental Science, Qingdao National Laboratory for Marine Science and Technology, Qingdao 266071, China
| | - Zhuomiao Liu
- Institute of Coastal Environmental Pollution Control, Ministry of Education Key Laboratory of Marine Environment and Ecology, Ocean University of China, Qingdao 266100, China
| | - Zhenyu Wang
- Institute of Environmental Processes and Pollution Control, School of Environmental and Civil Engineering, Jiangnan University, Wuxi 214122, China; Laboratory for Marine Ecology and Environmental Science, Qingdao National Laboratory for Marine Science and Technology, Qingdao 266071, China.
| | - Kaiqiang Yu
- Institute of Coastal Environmental Pollution Control, Ministry of Education Key Laboratory of Marine Environment and Ecology, Ocean University of China, Qingdao 266100, China
| | - Baoshan Xing
- Stockbridge School of Agriculture, University of Massachusetts, Amherst, MA 01003, USA.
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23
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Aramesh-Boroujeni Z, Jahani S, Khorasani-Motlagh M, Kerman K, Aramesh N, Asadpour S, Noroozifar M. Experimental and theoretical investigations of Dy(III) complex with 2,2'-bipyridine ligand: DNA and BSA interactions and antimicrobial activity study. J Biomol Struct Dyn 2019; 38:4746-4763. [PMID: 31684852 DOI: 10.1080/07391102.2019.1689170] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Abstract
In this study, the interactions of a novel metal complex [Dy(bpy)2Cl3.OH2] (bpy is 2,2'-bipyridine) with fish salmon DNA (FS-DNA) and bovine serum albumin (BSA) were investigated by experimental and theoretical methods. All results suggested significant binding between the Dy(III) complex with FS-DNA and BSA. The binding constants (Kb), Stern-Volmer quenching constants (KSV) of Dy(III)-complex with FS-DNA and BSA at various temperatures as well as thermodynamic parameters using Van't Hoff equation were obtained. The experimental results from absorption, ionic strength, iodide ion quenching, ethidium bromide (EtBr) quenching studies and positive ΔH˚ and ΔS˚ suggested that hydrophobic groove-binding mode played a predominant role in the binding of Dy(III)-complex with FS-DNA. Indeed, the molecular docking results for DNA-binding were in agreement with experimental data. Besides, the results found from experimental and molecular modeling indicated that the Dy(III)-complex bound to BSA via Van der Waals interactions. Moreover, the results of competitive tests by phenylbutazone, ibuprofen, and hemin (as a site-I, site-II and site-III markers, respectively) considered that the site-III of BSA is the most possible binding site for Dy(III)-complex. In addition, Dy(III) complex was concurrently screened for its antimicrobial activities. The presented data provide a promising platform for the development of novel metal complexes that target nucleic acids and proteins with antimicrobial activity.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Zahra Aramesh-Boroujeni
- Department of Clinical Laboratory, AlZahra Hospital, Isfahan University of Medical Sciences, Isfahan, Iran.,Department of Chemistry, University of Sistan and Baluchestan, Zahedan, Iran
| | - Shohreh Jahani
- Nano Bioeletrochemistry Research Center, Bam University of Medical Sciences, Bam, Iran
| | | | - Kagan Kerman
- Department of Physical and Environmental Sciences, University of Toronto Scarborough, Toronto, Ontario, Canada
| | - Nahal Aramesh
- Department of Chemistry, Faculty of Sciences, Yasouj University, Yasouj, Iran
| | - Saeid Asadpour
- Department of Chemistry, Faculty of Sciences, Shahrekord University, Shahrekord, Iran
| | - Meissam Noroozifar
- Department of Physical and Environmental Sciences, University of Toronto Scarborough, Toronto, Ontario, Canada
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24
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A new electrochemical DNA biosensor based on modified carbon paste electrode using graphene quantum dots and ionic liquid for determination of topotecan. Microchem J 2019. [DOI: 10.1016/j.microc.2019.104085] [Citation(s) in RCA: 69] [Impact Index Per Article: 13.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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25
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Singhal S, Khanna P, Khanna L. Synthesis, DFT studies, molecular docking, antimicrobial screening and UV fluorescence studies on ct-DNA for novel Schiff bases of 2-(1-aminobenzyl) benzimidazole. Heliyon 2019; 5:e02596. [PMID: 31667415 PMCID: PMC6812229 DOI: 10.1016/j.heliyon.2019.e02596] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2019] [Revised: 06/27/2019] [Accepted: 10/01/2019] [Indexed: 01/26/2023] Open
Abstract
Novel Schiff bases (SBs) were synthesized by condensation of 2-(1-Amino benzyl) benzimidazole with heterocyclic and aromatic carbonyl compounds. The structural characterization was done using 1H, 13C NMR, FTIR and ES-MS spectroscopic techniques. The in silico pharmacokinetics showed that nearly all compounds obeyed Lipinski rule of 5 with low toxicity and metabolic stability. The global reactivity descriptors were calculated using DFT approach. The molecular docking result of SBs with ct-DNA suggested interaction via groove binding mode. The antibacterial activity was tested against S. aureus and E. coli, indicated significant inhibition than reference drug. The compound 4d gave best results at 50 μg ml-1 concentrations. UV/Vis and Fluorescence spectroscopy tools were used to evaluate ct-DNA binding ability of compounds 4a-e through hypochromic shift. The steady state fluorescence predicted a moderate binding constant of 1.12 × 104 for 4d, indicative of non-intercalative mode.
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Affiliation(s)
- Sugandha Singhal
- University School of Basic and Applied Sciences, Guru Gobind Singh Indraprastha University, Sector 16-C, Dwarka, New Delhi, 110078, India
| | - Pankaj Khanna
- Department of Chemistry, Acharya Narendra Dev College, University of Delhi, Kalkaji, New Delhi, 110019, India
| | - Leena Khanna
- University School of Basic and Applied Sciences, Guru Gobind Singh Indraprastha University, Sector 16-C, Dwarka, New Delhi, 110078, India
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26
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Aramesh-Boroujeni Z, Jahani S, Khorasani-Motlagh M, Kerman K, Noroozifar M. Evaluation of DNA, BSA binding, DNA cleavage and antimicrobial activity of ytterbium(III) complex containing 2,2'-bipyridine ligand. J Biomol Struct Dyn 2019; 38:1711-1725. [DOI: 10.1080/07391102.2019.1617788] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Zahra Aramesh-Boroujeni
- Department of Clinical Laboratory, AlZahra Hospital, Isfahan University of Medical Sciences, Isfahan, Iran
- Department of Chemistry, University of Isfahan, Isfahan, Iran
| | - Shohreh Jahani
- Nano Bioeletrochemistry Research Center, Bam University of Medical Sciences, Bam, Iran
| | | | - Kagan Kerman
- Department of Physical and Environmental Sciences, University of Toronto Scarborough, Toronto, Ontario, Canada
| | - Meissam Noroozifar
- Department of Chemistry, University of Sistan and Baluchestan, Zahedan, Iran
- Department of Physical and Environmental Sciences, University of Toronto Scarborough, Toronto, Ontario, Canada
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27
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Synthesis, characterization and in vitro antiproliferative evaluation of ionic liquids based on alkyl-substituted thiabendazolium. J Mol Liq 2019. [DOI: 10.1016/j.molliq.2019.03.007] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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28
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Moradinia E, Mansournia M, Aramesh‐Boroujeni Z, Bordbar A. New transition metal complexes of 9,10‐phenanthrenequinone p‐toluyl hydrazone Schiff base: Synthesis, spectroscopy, DNA and HSA interactions, antimicrobial, DFT and docking studies. Appl Organomet Chem 2019. [DOI: 10.1002/aoc.4893] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Elham Moradinia
- Department of Inorganic Chemistry, Faculty of ChemistryUniversity of Kashan Kashan P.O. Box 87317‐53153 IR Iran
| | - Mohammadreza Mansournia
- Department of Inorganic Chemistry, Faculty of ChemistryUniversity of Kashan Kashan P.O. Box 87317‐53153 IR Iran
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29
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Kale KB, Ottoor DP. Comprehensive analysis of the atenolol - DNA complex by viscometric, molecular docking and spectroscopic techniques. LUMINESCENCE 2018; 34:39-47. [DOI: 10.1002/bio.3574] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2018] [Revised: 10/01/2018] [Accepted: 10/04/2018] [Indexed: 12/28/2022]
Affiliation(s)
- Kishor B. Kale
- Department of Chemistry; Savitribai Phule Pune University; Ganeshkhind Road Pune India
| | - Divya P. Ottoor
- Department of Chemistry; Savitribai Phule Pune University; Ganeshkhind Road Pune India
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30
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In vitro binding interaction of atorvastatin with calf thymus DNA: multispectroscopic, gel electrophoresis and molecular docking studies. J Pharm Biomed Anal 2018; 161:101-109. [DOI: 10.1016/j.jpba.2018.08.033] [Citation(s) in RCA: 30] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2018] [Revised: 08/13/2018] [Accepted: 08/16/2018] [Indexed: 12/12/2022]
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31
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Das S, da Silva CJ, Silva MDM, Dantas MDDA, de Fátima Â, Góis Ruiz ALT, da Silva CM, de Carvalho JE, Santos JCC, Figueiredo IM, da Silva-Júnior EF, de Aquino TM, de Araújo-Júnior JX, Brahmachari G, Modolo LV. Highly functionalized piperidines: Free radical scavenging, anticancer activity, DNA interaction and correlation with biological activity. J Adv Res 2017; 9:51-61. [PMID: 30046486 PMCID: PMC6057241 DOI: 10.1016/j.jare.2017.10.010] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2017] [Revised: 10/29/2017] [Accepted: 10/30/2017] [Indexed: 11/23/2022] Open
Abstract
Twenty-five piperidines were studied as potential radical scavengers and antitumor agents. Quantitative interaction of compounds with ctDNA using spectroscopic techniques was also evaluated. Our results demonstrate that the evaluated piperidines possesses different abilities to scavenge the radical 2,2-diphenyl-1-picrylhydrazyl (DPPH) and the anion radical superoxide (•O2−). The piperidine 19 was the most potent radical DPPH scavenger, while the most effective to •O2− scavenger was piperidine 10. In general, U251, MCF7, NCI/ADR-RES, NCI-H460 and HT29 cells were least sensitive to the tested compounds and all compounds were considerably more toxic to the studied cancer cell lines than to the normal cell line HaCaT. The binding mode of the compounds and ctDNA was preferably via intercalation. In addition, these results were confirmed based on theoretical studies. Finally, a linear and exponential correlation between interaction constant (Kb) and GI50 for several human cancer cell was observed.
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Affiliation(s)
- Suvankar Das
- Department of Chemistry, Visva-Bharati (a Central University), Santiniketan 731 235, West Bengal, India
| | - Cristiane J da Silva
- Department of Botany, Universidade Federal de Minas Gerais, Belo Horizonte, MG, Brazil
| | - Marina de M Silva
- Institute of Chemistry and Biotechnology, Universidade Federal de Alagoas, Maceió, AL, Brazil
| | | | - Ângelo de Fátima
- Department of Chemistry, Universidade Federal de Minas Gerais, Belo Horizonte, MG, Brazil
| | - Ana Lúcia T Góis Ruiz
- Chemical, Biological and Agricultural Pluridisciplinary Research Center, Universidade Estadual de Campinas, Paulínia, SP, Brazil
| | - Cleiton M da Silva
- Department of Chemistry, Universidade Federal de Minas Gerais, Belo Horizonte, MG, Brazil
| | - João Ernesto de Carvalho
- Chemical, Biological and Agricultural Pluridisciplinary Research Center, Universidade Estadual de Campinas, Paulínia, SP, Brazil
| | - Josué C C Santos
- Institute of Chemistry and Biotechnology, Universidade Federal de Alagoas, Maceió, AL, Brazil
| | - Isis M Figueiredo
- Institute of Chemistry and Biotechnology, Universidade Federal de Alagoas, Maceió, AL, Brazil
| | - Edeildo F da Silva-Júnior
- Institute of Chemistry and Biotechnology, Universidade Federal de Alagoas, Maceió, AL, Brazil.,Laboratory of Medicinal Chemistry, Nursing and Pharmacy School, Universidade Federal de Alagoas, Maceió, AL, Brazil
| | - Thiago M de Aquino
- Institute of Chemistry and Biotechnology, Universidade Federal de Alagoas, Maceió, AL, Brazil.,Laboratory of Medicinal Chemistry, Nursing and Pharmacy School, Universidade Federal de Alagoas, Maceió, AL, Brazil
| | - João X de Araújo-Júnior
- Institute of Chemistry and Biotechnology, Universidade Federal de Alagoas, Maceió, AL, Brazil.,Laboratory of Medicinal Chemistry, Nursing and Pharmacy School, Universidade Federal de Alagoas, Maceió, AL, Brazil
| | - Goutam Brahmachari
- Department of Chemistry, Visva-Bharati (a Central University), Santiniketan 731 235, West Bengal, India
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32
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Deiana M, Mettra B, Matczyszyn K, Piela K, Pitrat D, Olesiak-Banska J, Monnereau C, Andraud C, Samoc M. Interactions of a biocompatible water-soluble anthracenyl polymer derivative with double-stranded DNA. Phys Chem Chem Phys 2016; 17:30318-27. [PMID: 26506886 DOI: 10.1039/c5cp05381a] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
We have studied the interaction of a polymeric water soluble anthracenyl derivative () with salmon testes DNA. The results from UV-Vis, fluorescence, Fourier transform infrared (FT-IR) and circular dichroism spectroscopies indicate that the groove binding process regulates the interaction between and DNA. The binding constants, calculated by absorption spectroscopy at 298, 304 and 310 K, were equal to 3.2 × 10(5) M(-1), 4.7 × 10(5) M(-1), and 6.6 × 10(5) M(-1) respectively, proving a relatively high affinity of for salmon testes DNA. Results of Hoechst 33258 displacement assays strongly support the groove binding mode of to DNA. The association stoichiometry of the :DNA adduct was found to be 1 for every 5 base pairs. FT-IR spectra, recorded at different /DNA molar ratios, indicate the involvement of the phosphate groups and adenine and thymine DNA bases in the association process. Thermodynamic results suggest that hydrophobic forces regulate the binding of with DNA without excluding some extent of involvement of van der Waals forces and hydrogen bonding arising due to surface binding between the hydrophilic polymeric arms of the ligand and the functional groups positioned on the edge of the groove. The resulting composite biomaterial could constitute a valuable candidate for future biological and/or photonic applications.
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Affiliation(s)
- Marco Deiana
- Advanced Materials Engineering and Modelling Group, Faculty of Chemistry, Wroclaw University of Technology, Wyb. Wyspianskiego 27, 50-370 Wroclaw, Poland.
| | - Bastien Mettra
- Laboratoire de Chimie, CNRS UMR 5182, Ecole Normale Supérieure de Lyon, Université, Lyon 1, Lyon, France
| | - Katarzyna Matczyszyn
- Advanced Materials Engineering and Modelling Group, Faculty of Chemistry, Wroclaw University of Technology, Wyb. Wyspianskiego 27, 50-370 Wroclaw, Poland.
| | - Katarzyna Piela
- Department of Physical and Quantum Chemistry, Faculty of Chemistry, Wroclaw University of Technology, Wyb. Wyspianskiego 27, 50-370 Wroclaw, Poland
| | - Delphine Pitrat
- Laboratoire de Chimie, CNRS UMR 5182, Ecole Normale Supérieure de Lyon, Université, Lyon 1, Lyon, France
| | - Joanna Olesiak-Banska
- Advanced Materials Engineering and Modelling Group, Faculty of Chemistry, Wroclaw University of Technology, Wyb. Wyspianskiego 27, 50-370 Wroclaw, Poland.
| | - Cyrille Monnereau
- Laboratoire de Chimie, CNRS UMR 5182, Ecole Normale Supérieure de Lyon, Université, Lyon 1, Lyon, France
| | - Chantal Andraud
- Laboratoire de Chimie, CNRS UMR 5182, Ecole Normale Supérieure de Lyon, Université, Lyon 1, Lyon, France
| | - Marek Samoc
- Advanced Materials Engineering and Modelling Group, Faculty of Chemistry, Wroclaw University of Technology, Wyb. Wyspianskiego 27, 50-370 Wroclaw, Poland.
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