1
|
Susheel Kumar K, Pratap Singh N. Identification of retinal diseases based on retinal blood vessel segmentation using Dagum PDF and feature-based machine learning. THE IMAGING SCIENCE JOURNAL 2023. [DOI: 10.1080/13682199.2023.2183319] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/06/2023]
Affiliation(s)
- K. Susheel Kumar
- Department of Computer science and Engineering, National Institute of Technology, Hamirpur, India
- Department of Computer Science and Engineering, Gandhi Institute of Technology and Management, Bengaluru, India
| | - Nagendra Pratap Singh
- Department of Computer science and Engineering, National Institute of Technology, Hamirpur, India
| |
Collapse
|
2
|
Guedri H, Alotaibi AA. Automatic Method for Blood Vessel Diameter Measurement on Color Retinal Images. J BIOMATER TISS ENG 2022. [DOI: 10.1166/jbt.2022.3126] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Automatic detection of retinal blood vessels and measurement of blood vessel diameter has become very useful in medical applications, including the diagnosis and monitoring of vascular therapy. This paper present a new method for the detection of retinal blood vessels from fundus images.
In addition, it accurately determines the blood vessels diameter. The proposed system consists of several stages starting from the detection of a complete blood vessel network (retinal images), a segmentation process, an extraction of blood vessel centerlines, and a new approach for the measurement
of the blood vessel diameters utilizing the circle diameter approach. The application of the proposed method is based on three publicly available databases (DRIVE, STARE, CHASE_DB and HRF), which has been conducted and compared to recently reported measurement techniques. Numerical results
demonstrate the efficacy of the proposed method achieving a success rate of 100% with 2.2454×10−4 as mean and 4.5833×10−5 as standard deviation differences. This could be harnessed in the future blood vessel measurement techniques.
Collapse
Affiliation(s)
- Hichem Guedri
- Electronics and Microelectronics Laboratory, Physics Department, Faculty of Sciences, Monastir University, Monastir, 5000, Tunisia
| | - Abdullah Alhumaidi Alotaibi
- Department of Science and Technology, College of Ranyah, Taif University, P.O. Box 11099, Taif 21944, Saudi Arabia
| |
Collapse
|
3
|
Khandouzi A, Ariafar A, Mashayekhpour Z, Pazira M, Baleghi Y. Retinal Vessel Segmentation, a Review of Classic and Deep Methods. Ann Biomed Eng 2022; 50:1292-1314. [PMID: 36008569 DOI: 10.1007/s10439-022-03058-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2022] [Accepted: 08/15/2022] [Indexed: 11/01/2022]
Abstract
Retinal illnesses such as diabetic retinopathy (DR) are the main causes of vision loss. In the early recognition of eye diseases, the segmentation of blood vessels in retina images plays an important role. Different symptoms of ocular diseases can be identified by the geometric features of ocular arteries. However, due to the complex construction of the blood vessels and their different thicknesses, segmenting the retina image is a challenging task. There are a number of algorithms that helped the detection of retinal diseases. This paper presents an overview of papers from 2016 to 2022 that discuss machine learning and deep learning methods for automatic vessel segmentation. The methods are divided into two groups: Deep learning-based, and classic methods. Algorithms, classifiers, pre-processing and specific techniques of each group is described, comprehensively. The performances of recent works are compared based on their achieved accuracy in different datasets in inclusive tables. A survey of most popular datasets like DRIVE, STARE, HRF and CHASE_DB1 is also given in this paper. Finally, a list of findings from this review is presented in the conclusion section.
Collapse
Affiliation(s)
- Ali Khandouzi
- Faculty of Electrical and Computer Engineering, Babol Noshirvani University of Technology, Babol, Iran
| | - Ali Ariafar
- Faculty of Electrical and Computer Engineering, Babol Noshirvani University of Technology, Babol, Iran
| | - Zahra Mashayekhpour
- Faculty of Electrical and Computer Engineering, Babol Noshirvani University of Technology, Babol, Iran
| | - Milad Pazira
- Faculty of Electrical and Computer Engineering, Babol Noshirvani University of Technology, Babol, Iran
| | - Yasser Baleghi
- Faculty of Electrical and Computer Engineering, Babol Noshirvani University of Technology, Babol, Iran.
| |
Collapse
|
4
|
Multifilters-Based Unsupervised Method for Retinal Blood Vessel Segmentation. APPLIED SCIENCES-BASEL 2022. [DOI: 10.3390/app12136393] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/10/2022]
Abstract
Fundus imaging is one of the crucial methods that help ophthalmologists for diagnosing the various eye diseases in modern medicine. An accurate vessel segmentation method can be a convenient tool to foresee and analyze fatal diseases, including hypertension or diabetes, which damage the retinal vessel’s appearance. This work suggests an unsupervised approach for vessels segmentation out of retinal images. The proposed method includes multiple steps. Firstly, from the colored retinal image, green channel is extracted and preprocessed utilizing Contrast Limited Histogram Equalization as well as Fuzzy Histogram Based Equalization for contrast enhancement. To expel geometrical articles (macula, optic disk) and noise, top-hat morphological operations are used. On the resulted enhanced image, matched filter and Gabor wavelet filter are applied, and the outputs from both is added to extract vessels pixels. The resulting image with the now noticeable blood vessel is binarized using human visual system (HVS). A final image of segmented blood vessel is obtained by applying post-processing. The suggested method is assessed on two public datasets (DRIVE and STARE) and showed comparable results with regard to sensitivity, specificity and accuracy. The results we achieved with respect to sensitivity, specificity together with accuracy on DRIVE database are 0.7271, 0.9798 and 0.9573, and on STARE database these are 0.7164, 0.9760, and 0.9560, respectively, in less than 3.17 s on average per image.
Collapse
|
5
|
Xu S, Chen Z, Cao W, Zhang F, Tao B. Retinal Vessel Segmentation Algorithm Based on Residual Convolution Neural Network. Front Bioeng Biotechnol 2021; 9:786425. [PMID: 34957078 PMCID: PMC8702809 DOI: 10.3389/fbioe.2021.786425] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Accepted: 11/25/2021] [Indexed: 11/26/2022] Open
Abstract
Retinal vessels are the only deep micro vessels that can be observed in human body, the accurate identification of which has great significance on the diagnosis of hypertension, diabetes and other diseases. To this end, a retinal vessel segmentation algorithm based on residual convolution neural network is proposed according to the characteristics of the retinal vessels on fundus images. Improved residual attention module and deep supervision module are utilized, in which the low-level and high-level feature graphs are joined to construct the encoder-decoder network structure, and atrous convolution is introduced to the pyramid pooling. The experiments result on the fundus image data set DRIVE and STARE show that this algorithm can obtain complete retinal vessel segmentation as well as connected vessel stems and terminals. The average accuracy on DRIVE and STARE reaches 95.90 and 96.88%, and the average specificity is 98.85 and 97.85%, which shows superior performance compared to other methods. This algorithm is verified feasible and effective for retinal vessel segmentation of fundus images and has the ability to detect more capillaries.
Collapse
Affiliation(s)
- Shuang Xu
- Key Laboratory of Metallurgical Equipment and Control Technology, Ministry of Education, Wuhan University of Science and Technology, Wuhan, China
- Hubei Key Laboratory of Mechanical Transmission and Manufacturing Engineering, Wuhan University of Science and Technology, Wuhan, China
| | - Zhiqiang Chen
- Key Laboratory of Metallurgical Equipment and Control Technology, Ministry of Education, Wuhan University of Science and Technology, Wuhan, China
- Hubei Key Laboratory of Mechanical Transmission and Manufacturing Engineering, Wuhan University of Science and Technology, Wuhan, China
| | - Weiyi Cao
- Precision Manufacturing Institute, Wuhan University of Science and Technology, Wuhan, China
| | - Feng Zhang
- Key Laboratory of Metallurgical Equipment and Control Technology, Ministry of Education, Wuhan University of Science and Technology, Wuhan, China
- Hubei Key Laboratory of Mechanical Transmission and Manufacturing Engineering, Wuhan University of Science and Technology, Wuhan, China
| | - Bo Tao
- Hubei Key Laboratory of Mechanical Transmission and Manufacturing Engineering, Wuhan University of Science and Technology, Wuhan, China
- Precision Manufacturing Institute, Wuhan University of Science and Technology, Wuhan, China
| |
Collapse
|
6
|
Ramos-Soto O, Rodríguez-Esparza E, Balderas-Mata SE, Oliva D, Hassanien AE, Meleppat RK, Zawadzki RJ. An efficient retinal blood vessel segmentation in eye fundus images by using optimized top-hat and homomorphic filtering. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2021; 201:105949. [PMID: 33567382 DOI: 10.1016/j.cmpb.2021.105949] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2020] [Accepted: 01/18/2021] [Indexed: 06/12/2023]
Abstract
BACKGROUND AND OBJECTIVE Automatic segmentation of retinal blood vessels makes a major contribution in CADx of various ophthalmic and cardiovascular diseases. A procedure to segment thin and thick retinal vessels is essential for medical analysis and diagnosis of related diseases. In this article, a novel methodology for robust vessel segmentation is proposed, handling the existing challenges presented in the literature. METHODS The proposed methodology consists of three stages, pre-processing, main processing, and post-processing. The first stage consists of applying filters for image smoothing. The main processing stage is divided into two configurations, the first to segment thick vessels through the new optimized top-hat, homomorphic filtering, and median filter. Then, the second configuration is used to segment thin vessels using the proposed optimized top-hat, homomorphic filtering, matched filter, and segmentation using the MCET-HHO multilevel algorithm. Finally, morphological image operations are carried out in the post-processing stage. RESULTS The proposed approach was assessed by using two publicly available databases (DRIVE and STARE) through three performance metrics: specificity, sensitivity, and accuracy. Analyzing the obtained results, an average of 0.9860, 0.7578 and 0.9667 were respectively achieved for DRIVE dataset and 0.9836, 0.7474 and 0.9580 for STARE dataset. CONCLUSIONS The numerical results obtained by the proposed technique, achieve competitive average values with the up-to-date techniques. The proposed approach outperform all leading unsupervised methods discussed in terms of specificity and accuracy. In addition, it outperforms most of the state-of-the-art supervised methods without the computational cost associated with these algorithms. Detailed visual analysis has shown that a more precise segmentation of thin vessels was possible with the proposed approach when compared with other procedures.
Collapse
Affiliation(s)
- Oscar Ramos-Soto
- División de Electrónica y Computación, Universidad de Guadalajara, CUCEI, Av. Revolución 1500, C.P. 44430, Guadalajara, Jal., Mexico.
| | - Erick Rodríguez-Esparza
- División de Electrónica y Computación, Universidad de Guadalajara, CUCEI, Av. Revolución 1500, C.P. 44430, Guadalajara, Jal., Mexico; DeustoTech, Faculty of Engineering, University of Deusto, Av. Universidades, 24, 48007 Bilbao, Spain.
| | - Sandra E Balderas-Mata
- División de Electrónica y Computación, Universidad de Guadalajara, CUCEI, Av. Revolución 1500, C.P. 44430, Guadalajara, Jal., Mexico.
| | - Diego Oliva
- División de Electrónica y Computación, Universidad de Guadalajara, CUCEI, Av. Revolución 1500, C.P. 44430, Guadalajara, Jal., Mexico; IN3 - Computer Science Dept., Universitat Oberta de Catalunya, Castelldefels, Spain.
| | | | - Ratheesh K Meleppat
- UC Davis Eyepod Imaging Laboratory, Dept. of Cell Biology and Human Anatomy, University of California Davis, Davis, CA 95616, USA; Dept. of Ophthalmology & Vision Science, University of California Davis, Sacramento, CA, USA.
| | - Robert J Zawadzki
- UC Davis Eyepod Imaging Laboratory, Dept. of Cell Biology and Human Anatomy, University of California Davis, Davis, CA 95616, USA; Dept. of Ophthalmology & Vision Science, University of California Davis, Sacramento, CA, USA.
| |
Collapse
|
7
|
Liao Y, Xia H, Song S, Li H. Microaneurysm detection in fundus images based on a novel end-to-end convolutional neural network. Biocybern Biomed Eng 2021. [DOI: 10.1016/j.bbe.2021.04.005] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
|