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Choi S, Choi K, Yun HK, Kim SH, Choi HH, Park YS, Joo S. Diagnosis of atrial fibrillation based on AI-detected anomalies of ECG segments. Heliyon 2024; 10:e23597. [PMID: 38187293 PMCID: PMC10770559 DOI: 10.1016/j.heliyon.2023.e23597] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2023] [Revised: 12/06/2023] [Accepted: 12/07/2023] [Indexed: 01/09/2024] Open
Abstract
Early detection of atrial fibrillation (AF) is crucial for its effective management and prevention. Various methods for detecting AF using deep learning (DL) based on supervised learning with a large labeled dataset have a remarkable performance. However, supervised learning has several problems, as it is time-consuming for labeling and has a data dependency problem. Moreover, most of the DL methods do not provide any clinical evidence to physicians regarding the analysis of electrocardiography (ECG) for classification or detection of AF. To address these limitations, in this study, we proposed a novel AF diagnosis system using unsupervised learning for anomaly detection with three segments, PreQ, QRS, and PostS, based on the normal ECG. Two independent datasets, PTB-XL and China, were used in three experiments. We used a long short-term memory (LSTM)-based autoencoder to train the segments of the normal ECG. Based on the threshold of anomaly scores using mean squared error (MSE), it distinguished between normal and AF segments. In Experiment A, the best score was that of PreQ, which detected AF with an AUROC score of 0.96. In Experiment B and C for cross validation of each dataset, the best scores were also of PreQ, with AUROC scores of 0.9 and 0.95, respectively. To verify the significance of the anomaly score in distinguishing between AF and normal segments, we utilized an XG-Boosted model after generating anomaly scores in the three segments. The XG-Boosted model achieved an AUROC score of 0.98 and an F1 score of 0.94. AF detection using DL has been controversial among many physicians. However, our study differentiates itself from previous studies in that we can demonstrate evidence that distinguishes AF from normal segments based on the anomaly score.
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Affiliation(s)
- Sanghoon Choi
- Department of Biomedical Engineering, University of Ulsan College of Medicine, Seoul, Republic of Korea
- Asan Medical Institute of Convergence Science and Technology, Asan Medical Center, Seoul, Republic of Korea
| | - Kyungmin Choi
- Department of Biomedical Engineering, University of Ulsan College of Medicine, Seoul, Republic of Korea
- Asan Medical Institute of Convergence Science and Technology, Asan Medical Center, Seoul, Republic of Korea
| | - Hong Kyun Yun
- Department of Biomedical Engineering, University of Ulsan College of Medicine, Seoul, Republic of Korea
- Asan Medical Institute of Convergence Science and Technology, Asan Medical Center, Seoul, Republic of Korea
| | - Su Hyeon Kim
- Department of Biomedical Engineering, University of Ulsan College of Medicine, Seoul, Republic of Korea
- Asan Medical Institute of Convergence Science and Technology, Asan Medical Center, Seoul, Republic of Korea
| | - Hyeon-Hwa Choi
- Department of Biomedical Engineering, University of Ulsan College of Medicine, Seoul, Republic of Korea
- Asan Medical Institute of Convergence Science and Technology, Asan Medical Center, Seoul, Republic of Korea
| | - Yi-Seul Park
- Department of Biomedical Engineering, University of Ulsan College of Medicine, Seoul, Republic of Korea
- Asan Medical Institute of Convergence Science and Technology, Asan Medical Center, Seoul, Republic of Korea
| | - Segyeong Joo
- Department of Biomedical Engineering, University of Ulsan College of Medicine, Seoul, Republic of Korea
- Asan Medical Institute of Convergence Science and Technology, Asan Medical Center, Seoul, Republic of Korea
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Rukhsar S, Tiwari AK. Lightweight convolution transformer for cross-patient seizure detection in multi-channel EEG signals. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2023; 242:107856. [PMID: 37857026 DOI: 10.1016/j.cmpb.2023.107856] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2023] [Revised: 09/26/2023] [Accepted: 10/08/2023] [Indexed: 10/21/2023]
Abstract
BACKGROUND Epilepsy is a neurological illness affecting the brain that makes people more likely to experience frequent, spontaneous seizures. There has to be an accurate automated method for measuring seizures frequency and severity to assess the efficacy of pharmacological therapy for epilepsy. The drug quantities are often derived from patient reports which may cause significant issues owing to inadequate or inaccurate descriptions of seizures and their frequencies. METHODS AND MATERIALS This study proposes a novel deep learning architecture-based Lightweight Convolution Transformer (LCT). The Transformer model is able to learn spatial and temporal correlated information simultaneously from the multi-channel electroencephalogram (EEG) signal to detect seizures at smaller segment lengths. In the proposed work, the lack of translation equivariance and localization of ViT is reduced using convolution tokenization, and rich information from the Transformer encoder is extracted by sequence pooling instead of the learnable class token. RESULTS Extensive experimental results demonstrate that the proposed model on cross-patient learning can effectively detect seizures from the raw EEG signals. The accuracy and F1-score of seizure detection in the cross-patient case on the CHB-MIT dataset are 96.31% and 96.32%, respectively, at 0.5 sec segment length. In addition, the performance metrics show that the inclusion of inductive biases and attention-based pooling in the model enhances the performance and reduces the number of Transformer encoder layers, which significantly reduces the computational complexity. In this research, we provide a novel approach to enhance efficiency and simplify the architecture for multi-channel automated seizure detection.
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Affiliation(s)
- Salim Rukhsar
- Department of Electrical Engineering, Indian Institute of Technology Jodhpur, Rajasthan, 342030, India.
| | - Anil Kumar Tiwari
- Department of Electrical Engineering, Indian Institute of Technology Jodhpur, Rajasthan, 342030, India
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Sangle SB, Gaikwad CJ. Accumulated bispectral image-based respiratory sound signal classification using deep learning. SIGNAL, IMAGE AND VIDEO PROCESSING 2023; 17:1-8. [PMID: 37362234 PMCID: PMC10161180 DOI: 10.1007/s11760-023-02589-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Revised: 04/06/2023] [Accepted: 04/07/2023] [Indexed: 06/28/2023]
Abstract
The COVID-19 virus is increasingly crucial to human health since new variants appear frequently. Detection of COVID-19 through respiratory sound has been an important area of research. This study analyzes respiratory sounds using novel accumulated bi-spectral features. The principal domain bispectrum is used for computing accumulated bispectrum. The resulting magnitude bispectrum is used in forming the bispectral image. In this work, a convolutional neural network (CNN) and ResNet-50 algorithms are designed to classify respiratory sounds as either COVID-19 or healthy. The performance of the proposed method is compared with the state-of-the-art methods. The proposed CNN-based method achieves the highest accuracy of 87.68% for shallow breath sounds, and ResNet-50 achieves the highest accuracy of 87.62% for deep breath sounds. Similarly, proposed methods gives the improved performance for other respiratory sounds.
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Affiliation(s)
- Sandeep B. Sangle
- Department of Electronics and Telecommunication Engineering, Ramrao Adik Institute of Technology, D.Y. Patil Deemed to be University, Nerul, Navi Mumbai, Maharashtra 400706 India
| | - Chandrakant J. Gaikwad
- Department of Electronics and Telecommunication Engineering, Ramrao Adik Institute of Technology, D.Y. Patil Deemed to be University, Nerul, Navi Mumbai, Maharashtra 400706 India
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