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For: Zsila F, Gedeon G. Binding of anti-prion agents to glycosaminoglycans: Evidence from electronic absorption and circular dichroism spectroscopy. Biochem Biophys Res Commun 2006;346:1267-74. [PMID: 16793017 DOI: 10.1016/j.bbrc.2006.06.033] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2006] [Accepted: 06/08/2006] [Indexed: 11/24/2022]
Number Cited by Other Article(s)
1
Maszota-Zieleniak M, Samsonov SA. Molecular Dynamics Simulation-Based Prediction of Glycosaminoglycan Interactions with Drug Molecules. Methods Mol Biol 2024;2714:143-153. [PMID: 37676597 DOI: 10.1007/978-1-0716-3441-7_8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/08/2023]
2
An ultrasensitive and selective method for visual detection of heparin in 100 % human plasma. Talanta 2023. [DOI: 10.1016/j.talanta.2022.124040] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
3
Molecular Dynamics Approaches Dissect Molecular Mechanisms Underlying Methylene Blue-Glycosaminoglycan Interactions. MOLECULES (BASEL, SWITZERLAND) 2022;27:molecules27092654. [PMID: 35566005 PMCID: PMC9105714 DOI: 10.3390/molecules27092654] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/23/2022] [Revised: 04/12/2022] [Accepted: 04/19/2022] [Indexed: 11/16/2022]
4
Zsila F. Comment on "Emissive H-Aggregates of an Ultrafast Molecular Rotor: A Promising Platform for Sensing Heparin". ACS APPLIED MATERIALS & INTERFACES 2021;13:50585-50588. [PMID: 34670370 DOI: 10.1021/acsami.1c11258] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
5
Maszota-Zieleniak M, Zsila F, Samsonov SA. Computational insights into heparin-small molecule interactions: Evaluation of the balance between stacking and non-stacking binding modes. Carbohydr Res 2021;507:108390. [PMID: 34271478 DOI: 10.1016/j.carres.2021.108390] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2021] [Revised: 06/21/2021] [Accepted: 06/30/2021] [Indexed: 10/20/2022]
6
Zsila F, Samsonov SA, Maszota-Zieleniak M. Mind Your Dye: The Amyloid Sensor Thioflavin T Interacts with Sulfated Glycosaminoglycans Used To Induce Cross-β-Sheet Motifs. J Phys Chem B 2020;124:11625-11633. [DOI: 10.1021/acs.jpcb.0c08273] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
7
Samsonov SA, Freza S, Zsila F. In silico analysis of heparin and chondroitin sulfate binding mechanisms of the antiprotozoal drug berenil and pentamidine. Carbohydr Res 2019;482:107742. [DOI: 10.1016/j.carres.2019.107742] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2019] [Revised: 07/09/2019] [Accepted: 07/10/2019] [Indexed: 12/18/2022]
8
Molecular interactions of the anticancer agent ellipticine with glycosaminoglycans by in silico analysis. Carbohydr Res 2018;462:28-33. [DOI: 10.1016/j.carres.2018.03.014] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2018] [Revised: 03/27/2018] [Accepted: 03/28/2018] [Indexed: 12/18/2022]
9
Zsila F, Juhász T, Kohut G, Beke-Somfai T. Heparin and Heparan Sulfate Binding of the Antiparasitic Drug Imidocarb: Circular Dichroism Spectroscopy, Isothermal Titration Calorimetry, and Computational Studies. J Phys Chem B 2018;122:1781-1791. [DOI: 10.1021/acs.jpcb.7b08876] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
10
Tiwari N, Srivastava A, Kundu B, Munde M. Biophysical insight into the heparin-peptide interaction and its modulation by a small molecule. J Mol Recognit 2017;31. [DOI: 10.1002/jmr.2674] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2017] [Revised: 08/28/2017] [Accepted: 09/03/2017] [Indexed: 12/21/2022]
11
Šebestík J, Teplý F, Císařová I, Vávra J, Koval D, Bouř P. Intense chirality induction in nitrile solvents by a helquat dye monitored by near resonance Raman scattering. Chem Commun (Camb) 2016;52:6257-60. [PMID: 27087537 DOI: 10.1039/c6cc01606e] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
12
Zsila F. The anticancer agent ellipticine binds to glycosaminoglycans at mildly acidic pH characteristic of the extracellular matrix of tumor tissues. RSC Adv 2016. [DOI: 10.1039/c5ra23437a] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]  Open
13
Zsila F. Glycosaminoglycan and DNA Binding Induced Intra- and Intermolecular Exciton Coupling of thebis-4-Aminoquinoline Surfen. Chirality 2015;27:605-12. [DOI: 10.1002/chir.22471] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2015] [Accepted: 04/28/2015] [Indexed: 02/02/2023]
14
Zsila F. Glycosaminoglycans are potential pharmacological targets for classic DNA minor groove binder drugs berenil and pentamidine. Phys Chem Chem Phys 2015;17:24560-5. [DOI: 10.1039/c5cp03153b] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
15
Liu L, Linhardt RJ, Zhang Z. Quantitative analysis of anions in glycosaminoglycans and application in heparin stability studies. Carbohydr Polym 2014;106:343-50. [PMID: 24721088 DOI: 10.1016/j.carbpol.2014.02.076] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2013] [Revised: 02/22/2014] [Accepted: 02/22/2014] [Indexed: 10/25/2022]
16
Small molecule inhibitors of protein interaction with glycosaminoglycans (SMIGs), a novel class of bioactive agents with anti-inflammatory properties. Biochim Biophys Acta Gen Subj 2013;1840:245-54. [PMID: 24060749 DOI: 10.1016/j.bbagen.2013.09.023] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2013] [Revised: 09/12/2013] [Accepted: 09/16/2013] [Indexed: 11/22/2022]
17
Saverioni D, Notari S, Capellari S, Poggiolini I, Giese A, Kretzschmar HA, Parchi P. Analyses of protease resistance and aggregation state of abnormal prion protein across the spectrum of human prions. J Biol Chem 2013;288:27972-85. [PMID: 23897825 DOI: 10.1074/jbc.m113.477547] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]  Open
18
Avula B, Tekwani BL, Chaurasiya ND, Nanayakkara NPD, Wang YH, Khan SI, Adelli VR, Sahu R, Elsohly MA, McChesney JD, Khan IA, Walker LA. Profiling primaquine metabolites in primary human hepatocytes using UHPLC-QTOF-MS with 13C stable isotope labeling. JOURNAL OF MASS SPECTROMETRY : JMS 2013;48:276-285. [PMID: 23378100 DOI: 10.1002/jms.3122] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/14/2012] [Revised: 10/09/2012] [Accepted: 10/09/2012] [Indexed: 06/01/2023]
19
Wang C, Yang A, Li X, Li D, Zhang M, Du H, Li C, Guo Y, Mao X, Dong M, Besenbacher F, Yang Y, Wang C. Observation of molecular inhibition and binding structures of amyloid peptides. NANOSCALE 2012;4:1895-909. [PMID: 22334382 DOI: 10.1039/c2nr11508e] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
20
Stanley FE, Warner AM, McWilliams KM, Stalcup AM. Heparin-induced circular dichroism of an achiral, bicyclic species. Chirality 2010;23:84-92. [DOI: 10.1002/chir.20873] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
21
The development of an FIA-CD strategy for screening sulfated polysaccharides using antimalarial drugs and related species as probes. Anal Bioanal Chem 2010;399:707-16. [DOI: 10.1007/s00216-010-4277-4] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2010] [Revised: 09/13/2010] [Accepted: 09/29/2010] [Indexed: 10/19/2022]
22
Stanley F, Stalcup A. Modeling revealed circular dichroism for quinacrine in the presence of heparin. Biochem Biophys Res Commun 2010;394:628-32. [DOI: 10.1016/j.bbrc.2010.03.037] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2010] [Accepted: 03/07/2010] [Indexed: 11/29/2022]
23
Stanley FE, Warner AM, Gutierrez SM, Stalcup AM. Heparin-induced circular dichroism of chloroquine. Biochem Biophys Res Commun 2009;388:28-30. [PMID: 19632199 DOI: 10.1016/j.bbrc.2009.07.098] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2009] [Accepted: 07/21/2009] [Indexed: 11/17/2022]
24
Fadnes B, Rekdal O, Uhlin-Hansen L. The anticancer activity of lytic peptides is inhibited by heparan sulfate on the surface of the tumor cells. BMC Cancer 2009;9:183. [PMID: 19527490 PMCID: PMC2703650 DOI: 10.1186/1471-2407-9-183] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2008] [Accepted: 06/15/2009] [Indexed: 01/29/2023]  Open
25
Klajnert B, Cangiotti M, Calici S, Ionov M, Majoral JP, Caminade AM, Cladera J, Bryszewska M, Ottaviani MF. Interactions between dendrimers and heparin and their implications for the anti-prion activity of dendrimers. NEW J CHEM 2009. [DOI: 10.1039/b820632p] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
26
Vale N, Matos J, Moreira R, Gomes P. Electrospray ionization mass spectrometry as a valuable tool in the characterization of novel primaquine peptidomimetic derivatives. EUROPEAN JOURNAL OF MASS SPECTROMETRY (CHICHESTER, ENGLAND) 2009;15:627-640. [PMID: 19679943 DOI: 10.1255/ejms.1011] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
27
Vale N, Matos J, Moreira R, Gomes P. Electrospray ionization-ion trap mass spectrometry study of PQAAPro and PQProAA mimetic derivatives of the antimalarial primaquine. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 2008;19:1476-1490. [PMID: 18657994 DOI: 10.1016/j.jasms.2008.06.019] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2008] [Revised: 06/20/2008] [Accepted: 06/20/2008] [Indexed: 05/26/2023]
28
Kusaykin M, Bakunina I, Sova V, Ermakova S, Kuznetsova T, Besednova N, Zaporozhets T, Zvyagintseva T. Structure, biological activity, and enzymatic transformation of fucoidans from the brown seaweeds. Biotechnol J 2008;3:904-15. [PMID: 18543244 DOI: 10.1002/biot.200700054] [Citation(s) in RCA: 158] [Impact Index Per Article: 9.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
29
The exciton model in molecular spectroscopy. PURE APPL CHEM 1965. [DOI: 10.1351/pac196511030371] [Citation(s) in RCA: 3303] [Impact Index Per Article: 56.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
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