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Luo YH, Long X, Cai Y, Zheng CW, Roldan MA, Yang S, Zhou D, Zhou C, Rittmann BE. A synergistic platform enables co-oxidation of halogenated organic pollutants without input of organic primary substrate. WATER RESEARCH 2023; 234:119801. [PMID: 36889084 DOI: 10.1016/j.watres.2023.119801] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/13/2022] [Revised: 02/06/2023] [Accepted: 02/23/2023] [Indexed: 06/18/2023]
Abstract
While co-oxidation is widely used to biodegrade halogenated organic pollutants (HOPs), a considerable amount of organic primary substrate is required. Adding organic primary substrates increases the operating cost and also leads to extra carbon dioxide release. In this study, we evaluated a two-stage Reduction and Oxidation Synergistic Platform (ROSP), which integrated catalytic reductive dehalogenation with biological co-oxidation for HOPs removal. The ROSP was a combination of an H2-based membrane catalytic-film reactor (H2-MCfR) and an O2-based membrane biofilm reactor (O2-MBfR). 4-chlorophenol (4-CP) was used as a model HOP to evaluate the performance of ROSP. In the MCfR stage, zero-valent palladium nanoparticles (Pd0NPs) catalyzed reductive hydrodechlorination that converted 4-CP to phenol, with a conversion yield over 92%. In the MBfR stage, the phenol was oxidized and used as a primary substrate that supported the co-oxidation of residual 4-CP. Genomic DNA sequencing revealed that phenol produced from 4-CP reduction enriched bacteria having genes for functional enzymes for phenol biodegradation in the biofilm community. In the ROSP, over 99% of 60 mg/L 4-CP was removed and mineralized during continuous operation: Effluent 4-CP and chemical oxygen demand concentrations were below 0.1 and 3 mg/L, respectively. H2 was the only added electron donor to the ROSP, which means no extra carbon dioxide was produced by primary-substrate oxidation.
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Affiliation(s)
- Yi-Hao Luo
- Engineering Research Center of Low-Carbon Treatment and Green Development of Polluted Water in Northeast China, Northeast Normal University, Changchun 130117, China; Biodesign Swette Center for Environmental Biotechnology, Arizona State University, Tempe, AZ 85287-5306, USA; Nanosystems Engineering Research Center for Nanotechnology-Enabled Water Treatment, School of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, AZ 85287-3005, USA
| | - Xiangxing Long
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University, Tempe, AZ 85287-5306, USA; Nanosystems Engineering Research Center for Nanotechnology-Enabled Water Treatment, School of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, AZ 85287-3005, USA
| | - Yuhang Cai
- Engineering Research Center of Low-Carbon Treatment and Green Development of Polluted Water in Northeast China, Northeast Normal University, Changchun 130117, China; Nanosystems Engineering Research Center for Nanotechnology-Enabled Water Treatment, School of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, AZ 85287-3005, USA
| | - Chen-Wei Zheng
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University, Tempe, AZ 85287-5306, USA
| | - Manuel A Roldan
- Eyring Materials Center, Arizona State University, Tempe AZ 85287-3005, USA
| | - Shize Yang
- Eyring Materials Center, Arizona State University, Tempe AZ 85287-3005, USA
| | - Dandan Zhou
- Engineering Research Center of Low-Carbon Treatment and Green Development of Polluted Water in Northeast China, Northeast Normal University, Changchun 130117, China; Biodesign Swette Center for Environmental Biotechnology, Arizona State University, Tempe, AZ 85287-5306, USA.
| | - Chen Zhou
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University, Tempe, AZ 85287-5306, USA
| | - Bruce E Rittmann
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University, Tempe, AZ 85287-5306, USA
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Jiang B, Zeng Q, Liu J, Hou Y, Xu J, Li H, Shi S, Ma F. Enhanced treatment performance of phenol wastewater and membrane antifouling by biochar-assisted EMBR. BIORESOURCE TECHNOLOGY 2020; 306:123147. [PMID: 32171174 DOI: 10.1016/j.biortech.2020.123147] [Citation(s) in RCA: 32] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2020] [Revised: 03/01/2020] [Accepted: 03/03/2020] [Indexed: 06/10/2023]
Abstract
Biochar-assisted EMBR (BC-assisted EMBR) was built to enhance treatment performance of phenol wastewater and membrane antifouling. BC-assisted EMBR significantly increased phenol degradation efficiency, owing to combined effects of biodegradation, adsorption and electro-catalytic degradation. Meanwhile, BC-assisted EMBR obviously mitigated membrane fouling. The coupling effect of BC and voltage led to the lower N-acyl-homoserine lactones (AHLs) and bound extracellular polymeric substances (bound EPS) contents around and on membrane surface. Protein (PN)/polysaccharide (PS) in bound EPS was decreased, led to the increase of negative charge and decrease of hydrophobicity of sludge, which abated bound EPS adsorption on membrane surface. Microbial community analyses revealed that the coupling effect of BC and voltage could enrich phenol-degraders (e.g., Comamonas), electron transfer genus (Phaselicystis), and biopolymer-degraders (Phaselicystis and Tepidisphaera) in BC-assisted EMBR and on its membrane surface, while decrease biofilm-former (e.g., Acinetobacter) and bound EPS-producer (Devosia), which was beneficial to promote phenol treatment and mitigate membrane fouling.
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Affiliation(s)
- Bei Jiang
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin 150090, China; Liaoning Key Lab of Marine Fishery Molecular Biology, Liaoning Ocean and Fisheries Science Research Institute, Dalian 116023, China
| | - Qianzhi Zeng
- School of Life Science, Liaoning Normal University, Dalian 116081, China
| | - Jiaxin Liu
- School of Life Science, Liaoning Normal University, Dalian 116081, China
| | - Yuan Hou
- School of Life Science, Liaoning Normal University, Dalian 116081, China
| | - Jin Xu
- School of Life Science, Liaoning Normal University, Dalian 116081, China
| | - Hongxin Li
- School of Life Science, Liaoning Normal University, Dalian 116081, China
| | - Shengnan Shi
- School of Life Science, Liaoning Normal University, Dalian 116081, China.
| | - Fang Ma
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin 150090, China.
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Microfluidic Single-Cell Analytics. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2020; 179:159-189. [PMID: 32737554 DOI: 10.1007/10_2020_134] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
What is the impact of cellular heterogeneity on process performance? How do individual cells contribute to averaged process productivity? Single-cell analysis is a key technology for answering such key questions of biotechnology, beyond bulky measurements with populations. The analysis of cellular individuality, its origins, and the dependency of process performance on cellular heterogeneity has tremendous potential for optimizing biotechnological processes in terms of metabolic, reaction, and process engineering. Microfluidics offer unmatched environmental control of the cellular environment and allow massively parallelized cultivation of single cells. However, the analytical accessibility to a cell's physiology is of crucial importance for obtaining the desired information on the single-cell production phenotype. Highly sensitive analytics are required to detect and quantify the minute amounts of target analytes and small physiological changes in a single cell. For their application to biotechnological questions, single-cell analytics must evolve toward the measurement of kinetics and specific rates of the smallest catalytic unit, the single cell. In this chapter, we focus on an introduction to the latest single-cell analytics and their application for obtaining physiological parameters in a biotechnological context from single cells. We present and discuss recent advancements in single-cell analytics that enable the analysis of cell-specific growth, uptake, and production kinetics, as well as the gene expression and regulatory mechanisms at a single-cell level.
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Development of sequential and simultaneous bacterial cultures to hydrolyse and detoxify wood pre-hydrolysate for enhanced acetone-butanol-ethanol (ABE) production. Enzyme Microb Technol 2019; 133:109438. [PMID: 31874697 DOI: 10.1016/j.enzmictec.2019.109438] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2019] [Revised: 09/12/2019] [Accepted: 10/01/2019] [Indexed: 12/27/2022]
Abstract
The use of microorganisms is a promising option for an eco-efficient and successful conversion of hardwood hemicelluloses to biofuels. The focus of this work is the treatment of hemicellulosic pre-hydrolysate by flocculation, followed by simultaneous or separate detoxification with Ureibacillus thermosphaericus and Cupriavidus taiwanensis co-culture, and hydrolysis with Paenibacillus campinasensis. A reduction of phenolic compounds was achieved mainly after flocculation, applied as a first detoxification step, but no increase in sugars concentration was observed. The ABE fermentation of the hydrolysate obtained from the simultaneous hydrolysis and detoxification produced 6.8 g L-1 of butanol after 116 h, which was higher than that generated with xylose synthetic medium. The higher biofuel concentration in the hydrolysate is attributed to the existence of carbon sources, other than xylose.
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Oyehan TA, Al-Thukair AA. Isolation and characterization of PAH-degrading bacteria from the Eastern Province, Saudi Arabia. MARINE POLLUTION BULLETIN 2017; 115:39-46. [PMID: 27912917 DOI: 10.1016/j.marpolbul.2016.11.007] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/13/2015] [Revised: 10/25/2016] [Accepted: 11/06/2016] [Indexed: 06/06/2023]
Abstract
Contaminated sediment samples were collected from the Eastern Province, Saudi Arabia for isolation of pyrene- and phenanthrene-degrading bacteria by enrichment method. Four isolates were morphologically characterized as Gram-negative rod strains and 16S rRNA sequence analysis revealed the isolates as closely related to Pseudomonas aeruginosa, P. citronellolis, Ochrobactrum intermedium and Cupriavidus taiwanensis. Degradation of the polycyclic aromatic hydrocarbons (PAHs) by the latter three strains was investigated in liquid cultures. Results of concentration reduction analyzed with gas chromatography show that P. citronellolis_LB was efficient in removing phenanthrene, degrading 94% of 100ppm in 15days while O. intermedium_BC1 was more efficient in pyrene-removal, degrading 62% in 2weeks. Furthermore, bacterial growth assessment using optical density and population counts revealed the latter as more suitable for microbial growth analysis in PAH-containing cultures. In conclusion, the isolated bacterial strains could be further developed for efficient use in biodegradation of PAH.
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Affiliation(s)
- Tajudeen A Oyehan
- Environmental Sciences Program of Earth Sciences Dept., King Fahd University of Petroleum & Minerals, Dhahran 31261, Saudi Arabia
| | - Assad A Al-Thukair
- Life Sciences Dept., King Fahd University of Petroleum & Minerals, Dhahran 31261, Saudi Arabia.
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Howell CC, Semple KT, Bending GD. Isolation and characterisation of azoxystrobin degrading bacteria from soil. CHEMOSPHERE 2014; 95:370-8. [PMID: 24125711 DOI: 10.1016/j.chemosphere.2013.09.048] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/28/2013] [Revised: 08/22/2013] [Accepted: 09/10/2013] [Indexed: 05/25/2023]
Abstract
The first strobilurin fungicides were introduced in 1996, and have since been used in a vast array of disease/plant systems worldwide. The strobilurins now consist of 16 compounds and represent the 2nd most important fungicide group worldwide with 15% of the total fungicide market share. Strobilurins are moderately persistent in soil, and some degradation products (e.g. azoxystrobin acid) have been detected as contaminants of freshwater systems. Little is currently known about the transformation processes involved in the biodegradation of strobilurins or the microbial groups involved. Using sequential soil and liquid culture enrichments, we isolated two bacterial strains which were able to degrade the most widely used strobilurin, azoxystrobin, when supplied as a sole carbon source. 16S rRNA showed that the strains showed homology to Cupriavidus sp. and Rhodanobacter sp. Both isolated strains were also able to degrade the related strobilurin compounds trifloxystrobin, pyraclostrobin, and kresoxim-methyl. An additional nitrogen source was required for degradation to occur, but the addition of a further carbon source reduced compound degradation by approximately 50%. However, (14)C radiometric analysis showed that full mineralisation of azosxystrobin to (14)CO2 was negligible for both isolates. 16S rRNA T-RFLP analysis using both DNA and RNA extracts showed that degradation of azoxystrobin in soil was associated with shifts in bacterial community structure. However, the phylotypes which proliferated during degradation could not be attributed to the isolated degraders.
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Affiliation(s)
- Christopher C Howell
- School of Life Sciences, University of Warwick, Gibbet Hill Road, Coventry, Warwickshire CV4 7AL, UK.
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Optimisation and scale-up of α-glucuronidase production by recombinant Saccharomyces cerevisiae in aerobic fed-batch culture with constant growth rate. Biochem Eng J 2013. [DOI: 10.1016/j.bej.2013.09.012] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Setoodeh P, Jahanmiri A, Eslamloueyan R. Hybrid neural modeling framework for simulation and optimization of diauxie-involved fed-batch fermentative succinate production. Chem Eng Sci 2012. [DOI: 10.1016/j.ces.2012.06.031] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Kresnowati MTAP, Forde GM, Chen XD. Model-based analysis and optimization of bioreactor for hematopoietic stem cell cultivation. Bioprocess Biosyst Eng 2010; 34:81-93. [PMID: 20652600 DOI: 10.1007/s00449-010-0449-z] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2010] [Accepted: 06/24/2010] [Indexed: 10/19/2022]
Abstract
One of the problems to be solved in attaining the full potentials of hematopoietic stem cell (HSC) applications is the limited availability of the cells. Growing HSCs in a bioreactor offers an alternative solution to this problem. Besides, it also offers the advantages of eliminating labour intensive process as well as the possible contamination involved in the periodic nutrient replenishments in the traditional T-flask stem cell cultivation. In spite of this, the optimization of HSC cultivation in a bioreactor has been barely explored. This manuscript discusses the development of a mathematical model to describe the dynamics in nutrient distribution and cell concentration of an ex vivo HSC cultivation in a microchannel perfusion bioreactor. The model was further used to optimize the cultivation by proposing three alternative feeding strategies in order to prevent the occurrence of nutrient limitation in the bioreactor. The evaluation of these strategies, the periodic step change increase in the inlet oxygen concentration, the periodic step change increase in the media inflow, and the feedback control of media inflow, shows that these strategies can successfully improve the cell yield of the bioreactor. In general, the developed model is useful for the design and optimization of bioreactor operation.
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Affiliation(s)
- M T A P Kresnowati
- Bioprocess and Microbiology Laboratory, Department of Chemical Engineering, Faculty of Industrial Technology, Bandung Institute of Technology, Ganesha 10, Bandung 40132, Indonesia.
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