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Bayar B, Veiga MC, Kennes C. Bioproduction of acetic acid from carbon dioxide as single substrate and zero valent iron (ZVI) by clostridia. J CO2 UTIL 2022. [DOI: 10.1016/j.jcou.2022.101915] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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2
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Agnihotri S, Yin DM, Mahboubi A, Sapmaz T, Varjani S, Qiao W, Koseoglu-Imer DY, Taherzadeh MJ. A Glimpse of the World of Volatile Fatty Acids Production and Application: A review. Bioengineered 2022; 13:1249-1275. [PMID: 34738864 PMCID: PMC8805862 DOI: 10.1080/21655979.2021.1996044] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2021] [Revised: 10/16/2021] [Accepted: 10/16/2021] [Indexed: 11/18/2022] Open
Abstract
Sustainable provision of chemicals and materials is undoubtedly a defining factor in guaranteeing economic, environmental, and social stability of future societies. Among the most sought-after chemical building blocks are volatile fatty acids (VFAs). VFAs such as acetic, propionic, and butyric acids have numerous industrial applications supporting from food and pharmaceuticals industries to wastewater treatment. The fact that VFAs can be produced synthetically from petrochemical derivatives and also through biological routes, for example, anaerobic digestion of organic mixed waste highlights their provision flexibility and sustainability. In this regard, this review presents a detailed overview of the applications associated with petrochemically and biologically generated VFAs, individually or in mixture, in industrial and laboratory scale, conventional and novel applications.
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Affiliation(s)
- Swarnima Agnihotri
- Swedish Centre for Resource Recovery, University of Borås, Borås, Sweden
| | - Dong-Min Yin
- Institute of Urban and Rural Mining, Changzhou University, Changzhou, China
| | - Amir Mahboubi
- Swedish Centre for Resource Recovery, University of Borås, Borås, Sweden
| | - Tugba Sapmaz
- Swedish Centre for Resource Recovery, University of Borås, Borås, Sweden
- Department of Environmental Engineering, Istanbul Technical University, Maslak, Istanbul, Turkey
| | | | - Wei Qiao
- Institute of Urban and Rural Mining, Changzhou University, Changzhou, China
| | - Derya Y. Koseoglu-Imer
- Department of Environmental Engineering, Istanbul Technical University, Maslak, Istanbul, Turkey
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Dhakal N, Acharya B. Syngas Fermentation for the Production of Bio-Based Polymers: A Review. Polymers (Basel) 2021; 13:polym13223917. [PMID: 34833218 PMCID: PMC8618084 DOI: 10.3390/polym13223917] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2021] [Revised: 11/04/2021] [Accepted: 11/09/2021] [Indexed: 11/21/2022] Open
Abstract
Increasing environmental awareness among the general public and legislators has driven this modern era to seek alternatives to fossil-derived products such as fuel and plastics. Addressing environmental issues through bio-based products driven from microbial fermentation of synthetic gas (syngas) could be a future endeavor, as this could result in both fuel and plastic in the form of bioethanol and polyhydroxyalkanoates (PHA). Abundant availability in the form of cellulosic, lignocellulosic, and other organic and inorganic wastes presents syngas catalysis as an interesting topic for commercialization. Fascination with syngas fermentation is trending, as it addresses the limitations of conventional technologies like direct biochemical conversion and Fischer–Tropsch’s method for the utilization of lignocellulosic biomass. A plethora of microbial strains is available for syngas fermentation and PHA production, which could be exploited either in an axenic form or in a mixed culture. These microbes constitute diverse biochemical pathways supported by the activity of hydrogenase and carbon monoxide dehydrogenase (CODH), thus resulting in product diversity. There are always possibilities of enzymatic regulation and/or gene tailoring to enhance the process’s effectiveness. PHA productivity drags the techno-economical perspective of syngas fermentation, and this is further influenced by syngas impurities, gas–liquid mass transfer (GLMT), substrate or product inhibition, downstream processing, etc. Product variation and valorization could improve the economical perspective and positively impact commercial sustainability. Moreover, choices of single-stage or multi-stage fermentation processes upon product specification followed by microbial selection could be perceptively optimized.
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Szacherska K, Oleskowicz-Popiel P, Ciesielski S, Mozejko-Ciesielska J. Volatile Fatty Acids as Carbon Sources for Polyhydroxyalkanoates Production. Polymers (Basel) 2021; 13:polym13030321. [PMID: 33498279 PMCID: PMC7863920 DOI: 10.3390/polym13030321] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2020] [Revised: 01/13/2021] [Accepted: 01/18/2021] [Indexed: 02/07/2023] Open
Abstract
Waste of industrial origin produced from synthetic materials are a serious threat to the natural environment. The ending resources of fossil raw materials and increasingly restrictive legal standards for the management of plastic waste have led to research on the use of biopolymers, which, due to their properties, may be an ecological alternative to currently used petrochemical polymers. Polyhydroxyalkanoates (PHAs) have gained much attention in recent years as the next generation of environmentally friendly materials. Currently, a lot of research is being done to reduce the costs of the biological process of PHA synthesis, which is the main factor limiting the production of PHAs on the industrial scale. The volatile fatty acids (VFAs) produced by anaerobic digestion from organic industrial and food waste, and various types of wastewater could be suitable carbon sources for PHA production. Thus, reusing the organic waste, while reducing the future fossil fuel, originated from plastic waste. PHA production from VFAs seem to be a good approach since VFAs composition determines the constituents of PHAs polymer and is of great influence on its properties. In order to reduce the overall costs of PHA production to a more reasonable level, it will be necessary to design a bioprocess that maximizes VFAs production, which will be beneficial for the PHA synthesis. Additionally, a very important factor that affects the profitable production of PHAs from VFAs is the selection of a microbial producer that will effectively synthesize the desired bioproduct. PHA production from VFAs has gained significant interest since VFAs composition determines the constituents of PHA polymer. Thus far, the conversion of VFAs into PHAs using pure bacterial cultures has received little attention, and the majority of studies have used mixed microbial communities for this purpose. This review discusses the current state of knowledge on PHAs synthesized by microorganisms cultured on VFAs.
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Affiliation(s)
- Karolina Szacherska
- Department of Microbiology and Mycology, Faculty of Biology and Biotechnology, University of Warmia and Mazury in Olsztyn, 10-719 Olsztyn, Poland;
| | - Piotr Oleskowicz-Popiel
- Water Supply and Bioeconomy Division, Faculty of Environmental Engineering and Energy, Poznan University of Technology, 60-965 Poznan, Poland;
| | - Slawomir Ciesielski
- Department of Environmental Biotechnology, University of Warmia and Mazury in Olsztyn, 10-719 Olsztyn, Poland;
| | - Justyna Mozejko-Ciesielska
- Department of Microbiology and Mycology, Faculty of Biology and Biotechnology, University of Warmia and Mazury in Olsztyn, 10-719 Olsztyn, Poland;
- Correspondence:
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Syngas Derived from Lignocellulosic Biomass Gasification as an Alternative Resource for Innovative Bioprocesses. Processes (Basel) 2020. [DOI: 10.3390/pr8121567] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
Abstract
A hybrid system based on lignocellulosic biomass gasification and syngas fermentation represents a second-generation biorefinery approach that is currently in the development phase. Lignocellulosic biomass can be gasified to produce syngas, which is a gas mixture consisting mainly of H2, CO, and CO2. The major challenge of biomass gasification is the syngas’s final quality. Consequently, the development of effective syngas clean-up technologies has gained increased interest in recent years. Furthermore, the bioconversion of syngas components has been intensively studied using acetogenic bacteria and their Wood–Ljungdahl pathway to produce, among others, acetate, ethanol, butyrate, butanol, caproate, hexanol, 2,3-butanediol, and lactate. Nowadays, syngas fermentation appears to be a promising alternative for producing commodity chemicals in comparison to fossil-based processes. Research studies on syngas fermentation have been focused on process design and optimization, investigating the medium composition, operating parameters, and bioreactor design. Moreover, metabolic engineering efforts have been made to develop genetically modified strains with improved production. In 2018, for the first time, a syngas fermentation pilot plant from biomass gasification was built by LanzaTech Inc. in cooperation with Aemetis, Inc. Future research will focus on coupling syngas fermentation with additional bioprocesses and/or on identifying new non-acetogenic microorganisms to produce high-value chemicals beyond acetate and ethanol.
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Chen H, Simoska O, Lim K, Grattieri M, Yuan M, Dong F, Lee YS, Beaver K, Weliwatte S, Gaffney EM, Minteer SD. Fundamentals, Applications, and Future Directions of Bioelectrocatalysis. Chem Rev 2020; 120:12903-12993. [DOI: 10.1021/acs.chemrev.0c00472] [Citation(s) in RCA: 118] [Impact Index Per Article: 29.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Hui Chen
- Department of Chemistry, University of Utah, 315 South 1400 East, RM 2020, Salt Lake City, Utah 84112, United States
| | - Olja Simoska
- Department of Chemistry, University of Utah, 315 South 1400 East, RM 2020, Salt Lake City, Utah 84112, United States
| | - Koun Lim
- Department of Chemistry, University of Utah, 315 South 1400 East, RM 2020, Salt Lake City, Utah 84112, United States
| | - Matteo Grattieri
- Department of Chemistry, University of Utah, 315 South 1400 East, RM 2020, Salt Lake City, Utah 84112, United States
| | - Mengwei Yuan
- Department of Chemistry, University of Utah, 315 South 1400 East, RM 2020, Salt Lake City, Utah 84112, United States
| | - Fangyuan Dong
- Department of Chemistry, University of Utah, 315 South 1400 East, RM 2020, Salt Lake City, Utah 84112, United States
| | - Yoo Seok Lee
- Department of Chemistry, University of Utah, 315 South 1400 East, RM 2020, Salt Lake City, Utah 84112, United States
| | - Kevin Beaver
- Department of Chemistry, University of Utah, 315 South 1400 East, RM 2020, Salt Lake City, Utah 84112, United States
| | - Samali Weliwatte
- Department of Chemistry, University of Utah, 315 South 1400 East, RM 2020, Salt Lake City, Utah 84112, United States
| | - Erin M. Gaffney
- Department of Chemistry, University of Utah, 315 South 1400 East, RM 2020, Salt Lake City, Utah 84112, United States
| | - Shelley D. Minteer
- Department of Chemistry, University of Utah, 315 South 1400 East, RM 2020, Salt Lake City, Utah 84112, United States
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Evaluation of Media Components and Process Parameters in a Sensitive and Robust Fed-Batch Syngas Fermentation System with Clostridium ljungdahlii. FERMENTATION-BASEL 2020. [DOI: 10.3390/fermentation6020061] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
The fermentation of synthesis gas, or syngas, by acetogenic bacteria can help in transitioning from a fossil-fuel-based to a renewable bioeconomy. The main fermentation products of Clostridium ljungdahlii, one of such microorganisms, are acetate and ethanol. A sensitive, robust and reproducible system was established for C. ljungdahlii syngas fermentation, and several process parameters and medium components (pH, gas flow, cysteine and yeast extract) were investigated to assess its impact on the fermentation outcomes, as well as real time gas consumption. Moreover, a closed carbon balance could be achieved with the data obtained. This system is a valuable tool to detect changes in the behavior of the culture. It can be applied for the screening of strains, gas compositions or media components, for a better understanding of the physiology and metabolic regulation of acetogenic bacteria. Here, it was shown that neither yeast extract nor cysteine was a limiting factor for cell growth since their supplementation did not have a noticeable impact on product formation or overall gas consumption. By combining the lowering of both the pH and the gas flow after 24 h, the highest ethanol to acetate ratio was achieved, but with the caveat of lower productivity.
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Arslan K, Bayar B, Nalakath Abubackar H, Veiga MC, Kennes C. Solventogenesis in Clostridium aceticum producing high concentrations of ethanol from syngas. BIORESOURCE TECHNOLOGY 2019; 292:121941. [PMID: 31401358 DOI: 10.1016/j.biortech.2019.121941] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2019] [Revised: 07/30/2019] [Accepted: 07/31/2019] [Indexed: 06/10/2023]
Abstract
The ethanol production capability of Clostridium aceticum was investigated and optimized, in order to evaluate the ability of that organism to produce high concentrations of fuel-ethanol. The results showed that C. aceticum can produce significant amounts of ethanol when a natural pH drop occurs in the fermentation broth as a consequence of acetic acid production in a first stage. Applying different pH-regulating strategies allowed to optimize ethanol production, which proved to be more efficient in case of natural acidification due to acetic acid, reaching up to 5.6 g/L ethanol, compared to artificial pH adjustment through the addition of hydrogen chloride. Playing with the pH value and the bioreactor operating conditions showed that, under specific conditions, C. aceticum is able to perform the reverse reaction as well and convert ethanol, produced at low pH, back to acetic acid, impeding, under those specific conditions, further accumulation of ethanol in the fermentation broth.
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Affiliation(s)
- Kübra Arslan
- Chemical Engineering Laboratory, Faculty of Sciences and Centre for Advanced Scientific Research (CICA), University of La Coruña, Rúa da Fraga 10, 15008 - La Coruña, Spain
| | - Büşra Bayar
- Chemical Engineering Laboratory, Faculty of Sciences and Centre for Advanced Scientific Research (CICA), University of La Coruña, Rúa da Fraga 10, 15008 - La Coruña, Spain
| | - Haris Nalakath Abubackar
- Chemical Engineering Laboratory, Faculty of Sciences and Centre for Advanced Scientific Research (CICA), University of La Coruña, Rúa da Fraga 10, 15008 - La Coruña, Spain
| | - María C Veiga
- Chemical Engineering Laboratory, Faculty of Sciences and Centre for Advanced Scientific Research (CICA), University of La Coruña, Rúa da Fraga 10, 15008 - La Coruña, Spain
| | - Christian Kennes
- Chemical Engineering Laboratory, Faculty of Sciences and Centre for Advanced Scientific Research (CICA), University of La Coruña, Rúa da Fraga 10, 15008 - La Coruña, Spain.
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Park S, Ahn B, Kim YK. Growth enhancement of bioethanol-producing microbe Clostridium autoethanogenum by changing culture medium composition. ACTA ACUST UNITED AC 2019. [DOI: 10.1016/j.biteb.2019.03.012] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
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10
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Chakraborty S, Rene ER, Lens PNL, Veiga MC, Kennes C. Enrichment of a solventogenic anaerobic sludge converting carbon monoxide and syngas into acids and alcohols. BIORESOURCE TECHNOLOGY 2019; 272:130-136. [PMID: 30321830 DOI: 10.1016/j.biortech.2018.10.002] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2018] [Revised: 09/29/2018] [Accepted: 10/01/2018] [Indexed: 06/08/2023]
Abstract
An anaerobic granular sludge was acclimatized to utilise CO in a continuously gas-fed stirred tank bioreactor by applying operating conditions expected to stimulate solventogenesis, i.e. the production of alcohols, and allowing to enrich for solventogenic populations. A cycle of high (6.2) and low (4.9) pH was applied in order to produce volatile fatty acids first at high pH, followed by their bioconversion into alcohols at low pH. The addition of yeast extract stimulated biomass growth, but not necessarily solventogenesis. The highest concentrations of metabolites achieved were 6.18 g/L acetic acid (30th day), 1.18 g/L butyric acid (28th day), and 0.423 g/L hexanoic acid (32nd day). Subsequently, acids were metabolized at lower pH, producing alcohols at concentrations of 11.1 g/L ethanol (43rd day), 1.8 g/L butanol (41st day) and 1.46 g/L hexanol (42nd day), confirming the successful enrichment strategy. Similarly, the enriched sludge could also convert syngas into acids and alcohols.
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Affiliation(s)
- Samayita Chakraborty
- Chemical Engineering Laboratory, Faculty of Sciences and Center for Advanced Scientific Research (CICA), University of La Coruña (UDC), E-15008 La Coruña, Spain; UNESCO-IHE Institute for Water Education, Westvest 7, P.O. Box 3015, NL-2611 AX Delft, The Netherlands
| | - Eldon R Rene
- UNESCO-IHE Institute for Water Education, Westvest 7, P.O. Box 3015, NL-2611 AX Delft, The Netherlands
| | - Piet N L Lens
- UNESCO-IHE Institute for Water Education, Westvest 7, P.O. Box 3015, NL-2611 AX Delft, The Netherlands
| | - María C Veiga
- Chemical Engineering Laboratory, Faculty of Sciences and Center for Advanced Scientific Research (CICA), University of La Coruña (UDC), E-15008 La Coruña, Spain
| | - Christian Kennes
- Chemical Engineering Laboratory, Faculty of Sciences and Center for Advanced Scientific Research (CICA), University of La Coruña (UDC), E-15008 La Coruña, Spain.
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11
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Mayer A, Weuster-Botz D. Reaction engineering analysis of the autotrophic energy metabolism of Clostridium aceticum. FEMS Microbiol Lett 2018; 364:4562590. [PMID: 29069379 DOI: 10.1093/femsle/fnx219] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2017] [Accepted: 10/17/2017] [Indexed: 11/13/2022] Open
Abstract
Acetogenesis with CO2:H2 or CO via the reductive acetyl-CoA pathway does not provide any net ATP formation in homoacetogenic bacteria. Autotrophic energy conservation is coupled to the generation of chemiosmotic H+ or Na+ gradients across the cytoplasm membrane using either a ferredoxin:NAD+ oxidoreductase (Rnf), a ferredoxin:H+ oxidoreductase (Ech) or substrate-level phosphorylation via cytochromes. The first isolated acetogenic bacterium Clostridium aceticum shows both cytochromes and Rnf complex, putting it into an outstanding position. Autotrophic batch processes with continuous gas supply were performed in fully controlled stirred-tank bioreactors to elucidate energy metabolism of C. aceticum. Varying the initial Na+ concentration in the medium showed sodium-dependent growth of C. aceticum with a growth optimum between 60 and 90 mM Na+. The addition of the Na+-selective ionophore ETH2120 or the protonophore CCCP or the H+/cation-antiporter monensin revealed that an H+ gradient is used as primary energy conservation mechanism, which strengthens the exceptional position of C. aceticum as acetogenic bacterium showing an H+-dependent energy conservation mechanism as well as Na+-dependent growth.
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De Tissera S, Köpke M, Simpson SD, Humphreys C, Minton NP, Dürre P. Syngas Biorefinery and Syngas Utilization. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2017. [DOI: 10.1007/10_2017_5] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
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Unni KN, Priji P, Sajith S, Faisal PA, Benjamin S. Pseudomonas aeruginosa strain BUP2, a novel bacterium inhabiting the rumen of Malabari goat, produces an efficient lipase. Biologia (Bratisl) 2016. [DOI: 10.1515/biolog-2016-0057] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Liew F, Martin ME, Tappel RC, Heijstra BD, Mihalcea C, Köpke M. Gas Fermentation-A Flexible Platform for Commercial Scale Production of Low-Carbon-Fuels and Chemicals from Waste and Renewable Feedstocks. Front Microbiol 2016; 7:694. [PMID: 27242719 PMCID: PMC4862988 DOI: 10.3389/fmicb.2016.00694] [Citation(s) in RCA: 206] [Impact Index Per Article: 25.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2016] [Accepted: 04/26/2016] [Indexed: 12/13/2022] Open
Abstract
There is an immediate need to drastically reduce the emissions associated with global fossil fuel consumption in order to limit climate change. However, carbon-based materials, chemicals, and transportation fuels are predominantly made from fossil sources and currently there is no alternative source available to adequately displace them. Gas-fermenting microorganisms that fix carbon dioxide (CO2) and carbon monoxide (CO) can break this dependence as they are capable of converting gaseous carbon to fuels and chemicals. As such, the technology can utilize a wide range of feedstocks including gasified organic matter of any sort (e.g., municipal solid waste, industrial waste, biomass, and agricultural waste residues) or industrial off-gases (e.g., from steel mills or processing plants). Gas fermentation has matured to the point that large-scale production of ethanol from gas has been demonstrated by two companies. This review gives an overview of the gas fermentation process, focusing specifically on anaerobic acetogens. Applications of synthetic biology and coupling gas fermentation to additional processes are discussed in detail. Both of these strategies, demonstrated at bench-scale, have abundant potential to rapidly expand the commercial product spectrum of gas fermentation and further improve efficiencies and yields.
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Draft Genome Sequence of Clostridium aceticum DSM 1496, a Potential Butanol Producer through Syngas Fermentation. GENOME ANNOUNCEMENTS 2015; 3:3/2/e00258-15. [PMID: 25931594 PMCID: PMC4417690 DOI: 10.1128/genomea.00258-15] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Abstract
Clostridium aceticum DSM 1496 is a Gram-negative anaerobic chemolithoautotrophic acetogenic bacterium that is capable of producing commodity chemicals from syngas fermentation. In this study, we report the draft genome sequence of the C. aceticum DSM 1496 strain (4.16 Mb) to elucidate the syngas fermentation metabolic pathway.
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Daniell J, Nagaraju S, Burton F, Köpke M, Simpson SD. Low-Carbon Fuel and Chemical Production by Anaerobic Gas Fermentation. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2015; 156:293-321. [PMID: 26957126 DOI: 10.1007/10_2015_5005] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
World energy demand is expected to increase by up to 40% by 2035. Over this period, the global population is also expected to increase by a billion people. A challenge facing the global community is not only to increase the supply of fuel, but also to minimize fossil carbon emissions to safeguard the environment, at the same time as ensuring that food production and supply is not detrimentally impacted. Gas fermentation is a rapidly maturing technology which allows low carbon fuel and commodity chemical synthesis. Unlike traditional biofuel technologies, gas fermentation avoids the use of sugars, relying instead on gas streams rich in carbon monoxide and/or hydrogen and carbon dioxide as sources of carbon and energy for product synthesis by specialized bacteria collectively known as acetogens. Thus, gas fermentation enables access to a diverse array of novel, large volume, and globally available feedstocks including industrial waste gases and syngas produced, for example, via the gasification of municipal waste and biomass. Through the efforts of academic labs and early stage ventures, process scale-up challenges have been surmounted through the development of specialized bioreactors. Furthermore, tools for the genetic improvement of the acetogenic bacteria have been reported, paving the way for the production of a spectrum of ever-more valuable products via this process. As a result of these developments, interest in gas fermentation among both researchers and legislators has grown significantly in the past 5 years to the point that this approach is now considered amongst the mainstream of emerging technology solutions for near-term low-carbon fuel and chemical synthesis.
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Affiliation(s)
- James Daniell
- LanzaTech Inc., 8045 Lamon Ave, Suite 400, Skokie, IL, 60077, USA.,School of Biological Sciences, University of Auckland, Auckland, New Zealand
| | - Shilpa Nagaraju
- LanzaTech Inc., 8045 Lamon Ave, Suite 400, Skokie, IL, 60077, USA
| | - Freya Burton
- LanzaTech Inc., 8045 Lamon Ave, Suite 400, Skokie, IL, 60077, USA
| | - Michael Köpke
- LanzaTech Inc., 8045 Lamon Ave, Suite 400, Skokie, IL, 60077, USA
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17
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Optimization of culture medium and modeling of curdlan production from Paenibacillus polymyxa by RSM and ANN. Int J Biol Macromol 2014; 70:463-73. [DOI: 10.1016/j.ijbiomac.2014.07.034] [Citation(s) in RCA: 57] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2014] [Revised: 07/08/2014] [Accepted: 07/16/2014] [Indexed: 11/22/2022]
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18
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Priji P, Unni KN, Sajith S, Binod P, Benjamin S. Production, optimization, and partial purification of lipase from Pseudomonas sp. strain BUP6, a novel rumen bacterium characterized from Malabari goat. Biotechnol Appl Biochem 2014; 62:71-8. [PMID: 24773509 DOI: 10.1002/bab.1237] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2014] [Accepted: 04/23/2014] [Indexed: 11/10/2022]
Abstract
This study introduces a novel bacterium-Pseudomonas sp. strain BUP6-isolated from the rumen of the Malabari goat with efficiency for producing lipase. It showed significant production of lipase when grown in a newly designed basal medium, supplemented with vegetable oil. Suitability of five vegetable oils such as groundnut oil, coconut oil, olive oil, sunflower oil, and palm oil as inducer for the production of lipase was examined, and groundnut oil supported the highest production of lipase (96.15 U/mL). Various physical parameters required for the maximum production of lipase were statistically optimized. Plackett-Burmann design was employed to study the interactive effects of physical parameters and found that temperature, agitation, and pH effected the production of lipase significantly. The optimum conditions for lipase production (37 °C, 200 rpm, and pH 6.9) were detected by Box-Behnken design and response surface methodology, which resulted in the 0.3-fold increase (i.e., 126 U/mL) of the lipase activity over the unoptimized condition. The apparent molecular mass of partially purified lipase was 35 kDa, as judged by SDS-PAGE; the activity of lipase was also confirmed by native PAGE. Thus, this study focuses on the need for the exploitation of rumen microbes for the production of industrially significant and human-friendly biomolecules to meet the future needs.
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Affiliation(s)
- Prakasan Priji
- Enzyme Technology Laboratory, Biotechnology Division, Department of Botany, University of Calicut, Thenhipalam, Kerala, India
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Selective enhancement of autotrophic acetate production with genetically modified Acetobacterium woodii. J Biotechnol 2014; 178:67-72. [DOI: 10.1016/j.jbiotec.2014.03.005] [Citation(s) in RCA: 95] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2013] [Revised: 02/21/2014] [Accepted: 03/01/2014] [Indexed: 11/18/2022]
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20
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Bengelsdorf FR, Straub M, Dürre P. Bacterial synthesis gas (syngas) fermentation. ENVIRONMENTAL TECHNOLOGY 2013; 34:1639-51. [PMID: 24350425 DOI: 10.1080/09593330.2013.827747] [Citation(s) in RCA: 118] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Acetogenic bacteria employing the Wood-Ljungdahl pathway can be used as biocatalysts in syngas fermentation for the production ofbiofuels such as ethanol or butanol as well as biocommodities such as acetate, lactate, butyrate, 2,3 butanediol, and acetone. The potential of such processes can be projected by the global syngas output, which was 70,817 megawatts thermal in 2010 and is expected to increase up to 72% in 2016. To date, different acetogens are used as commercial production strains for industrial syngas fermentations in pilot or demonstration plants (Coskata, INEOS Bio, LanzaTech) and first commercial units are expected to launch operation in the near future (INEOS Bio, LanzaTech). Considerations on potential yields are quite promising for fermentative production. New methods for metabolic engineering were established to construct novel recombinant acetogenic biocatalysts. Synthetic biology will certainly play a major role in constructing strains for commercial operations. This way, a cheap and abundant carbon source most probably replace, processes based on crude oil or sugar in the near future.
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Affiliation(s)
- Frank R Bengelsdorf
- Institute of Microbiology and Biotechnology, University of Ulm, Albert-Einstein-Allee 11, Ulm D-89081, Germany.
| | - Melanie Straub
- Institute of Microbiology and Biotechnology, University of Ulm, Albert-Einstein-Allee 11, Ulm D-89081, Germany
| | - Peter Dürre
- Institute of Microbiology and Biotechnology, University of Ulm, Albert-Einstein-Allee 11, Ulm D-89081, Germany
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Singh P, Shera SS, Banik J, Banik RM. Optimization of cultural conditions using response surface methodology versus artificial neural network and modeling of L-glutaminase production by Bacillus cereus MTCC 1305. BIORESOURCE TECHNOLOGY 2013; 137:261-269. [PMID: 23587828 DOI: 10.1016/j.biortech.2013.03.086] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/30/2013] [Revised: 03/10/2013] [Accepted: 03/12/2013] [Indexed: 06/02/2023]
Abstract
Response surface methodology and artificial neural network were used to optimize cultural conditions of L-glutaminase production from Bacillus cereus MTCC 1305. ANN model was superior to RSM model with higher value of coefficient of determination (99.97ANN>97.78RSM), predicted distribution coefficient (0.9992ANN>0.896RSM) and lower value of absolute average deviation (1.17%ANN<18.47%RSM). Optimum cultural conditions predicted by ANN were pH (7.5), fermentation time (40 h), temperature (34°C), inoculum size (2%), inoculum age (10 h) and agitation speed (175 rpm) with a maximum predicted production of L-glutaminase 666.97 U/l which was close to experimental production of L-glutaminase 667.23 U/l at simulated optimum cultural condition. The production of L-glutaminase was enhanced by 1.58-fold after optimization of cultural conditions. Simple kinetic models were developed using Logistic equation for cell growth, Luedeking Piret equation for L-glutaminase production and modified Luedeking Piret equation for glucose utilization indicating that L-glutaminase fermentation is non growth associated process.
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Affiliation(s)
- Priyanka Singh
- School of Biochemical Engineering, Indian Institute of Technology (BHU), Varanasi, India
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Abubackar HN, Veiga MC, Kennes C. Biological conversion of carbon monoxide to ethanol: effect of pH, gas pressure, reducing agent and yeast extract. BIORESOURCE TECHNOLOGY 2012; 114:518-22. [PMID: 22487129 DOI: 10.1016/j.biortech.2012.03.027] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2011] [Revised: 03/01/2012] [Accepted: 03/07/2012] [Indexed: 05/22/2023]
Abstract
A two-level full factorial design was carried out in order to investigate the effect of four factors on the bioconversion of carbon monoxide to ethanol and acetic acid by Clostridium autoethanogenum: initial pH (4.75-5.75), initial total pressure (0.8-1.6 bar), cysteine-HCl·H(2)O concentration (0.5-1.2 g/L) and yeast extract concentration (0.6-1.6 g/L). The maximum ethanol production was enhanced up to 200% when lowering the pH and amount yeast extract from 5.75 to 4.75 g/L and 1.6 to 0.6 g/L, respectively. The regression coefficient, regression model and analysis of variance (ANOVA) were obtained using MINITAB 16 software for ethanol, acetic acid and biomass. For ethanol, it was observed that all the main effects and the interaction effects were found statistically significant (p<0.05). The comparison between the experimental and the predicted values was found to be very satisfactory, indicating the suitability of the predicted model.
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Affiliation(s)
- Haris Nalakath Abubackar
- Chemical Engineering Laboratory, Faculty of Sciences, University of La Coruña, Rúa da Fraga 10, 15008 La Coruña, Spain
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Abstract
This study aimed to optimize the culture conditions (agitation speed, aeration rate and stirrer number) of hyaluronic acid production by Streptococcus zooepidemicus. Two optimization algorithms were used for comparison: response surface methodology (RSM) and genetic programming coupling Quantum-behaved particle swarm optimization algorithm (GP-QPSO). In GP -QPSO approach, GP is employed to model the microbial HA production and QPSO algorithm is used to find out the optimal culture conditions with the established GP estimator as the objective function. The maximum predicted value of HA production by RSM and GP-QPSO was 5.27 and 5.57 g/l, respectively. Here though both RSM and GP-QPSO approach provided good predictions, yet the proposed GP-QPSO method showed a clear superiority over RSM for both data fitting and optimization capabilities
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Production of mycelial biomass and exo-polymer by Hericium erinaceus CZ-2: Optimization of nutrients levels using response surface methodology. BIOTECHNOL BIOPROC E 2010. [DOI: 10.1007/s12257-009-0117-9] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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Hu P, Jacobsen LT, Horton JG, Lewis RS. Sulfide assessment in bioreactors with gas replacement. Biochem Eng J 2010. [DOI: 10.1016/j.bej.2010.02.006] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Liu L, Sun J, Xu W, Du G, Chen J. Modeling and optimization of microbial hyaluronic acid production by Streptococcus zooepidemicus using radial basis function neural network coupling quantum-behaved particle swarm optimization algorithm. Biotechnol Prog 2010; 25:1819-25. [PMID: 19691123 DOI: 10.1002/btpr.278] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Hyaluronic acid (HA) is a natural biopolymer with unique physiochemical and biological properties and finds a wide range of applications in biomedical and cosmetic fields. It is important to increase HA production to meet the increasing HA market demand. This work is aimed to model and optimize the amino acids addition to enhance HA production of Streptococcus zooepidemicus with radial basis function (RBF) neural network coupling quantum-behaved particle swarm optimization (QPSO) algorithm. In the RBF-QPSO approach, RBF neural network is used as a bioprocess modeling tool and QPSO algorithm is applied to conduct the optimization with the established RBF neural network black model as the objective function. The predicted maximum HA yield was 6.92 g/L under the following conditions: arginine 0.062 g/L, cysteine 0.036 g/L, and lysine 0.043 g/L. The optimal amino acids addition allowed HA yield increased from 5.0 g/L of the control to 6.7 g/L in the validation experiments. Moreover, the modeling and optimization capacity of the RBF-QPSO approach was compared with that of response surface methodology (RSM). It was indicated that the RBF-QPSO approach gave a slightly better modeling and optimization result compared with RSM. The developed RBF-QPSO approach in this work may be helpful for the modeling and optimization of the other multivariable, nonlinear, time-variant bioprocesses.
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Affiliation(s)
- Long Liu
- School of Biotechnology, Jiangnan University, Wuxi 214122, China
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Culture conditions optimization of hyaluronic acid production by Streptococcus zooepidemicus based on radial basis function neural network and quantum-behaved particle swarm optimization algorithm. Enzyme Microb Technol 2009. [DOI: 10.1016/j.enzmictec.2008.09.015] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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