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For: Cho M, Chung S, Heo SD, Ku J, Ban C. A simple fluorescent method for detecting mismatched DNAs using a MutS-fluorophore conjugate. Biosens Bioelectron 2006;22:1376-81. [PMID: 16876990 DOI: 10.1016/j.bios.2006.06.010] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2006] [Revised: 03/16/2006] [Accepted: 06/14/2006] [Indexed: 11/20/2022]
Number Cited by Other Article(s)
1
Murphy ZR, Shields DA, Evrony GD. Serial enrichment of heteroduplex DNA using a MutS-magnetic bead system. Biotechnol J 2023;18:e2200323. [PMID: 36317440 PMCID: PMC9839629 DOI: 10.1002/biot.202200323] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2022] [Revised: 10/13/2022] [Accepted: 10/26/2022] [Indexed: 11/05/2022]
2
Bae W, Yoon TY, Jeong C. Direct evaluation of self-quenching behavior of fluorophores at high concentrations using an evanescent field. PLoS One 2021;16:e0247326. [PMID: 33606817 PMCID: PMC7895399 DOI: 10.1371/journal.pone.0247326] [Citation(s) in RCA: 30] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2020] [Accepted: 02/04/2021] [Indexed: 01/09/2023]  Open
3
Zhang J, Wang Y, Chai B, Wang J, Li L, Liu M, Zhao G, Yao L, Gao X, Yin Y, Xu J. Efficient and Low-Cost Error Removal in DNA Synthesis by a High-Durability MutS. ACS Synth Biol 2020;9:940-952. [PMID: 32135061 DOI: 10.1021/acssynbio.0c00079] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
4
Single gold-bridged nanoprobes for identification of single point DNA mutations. Nat Commun 2019;10:836. [PMID: 30783107 PMCID: PMC6381086 DOI: 10.1038/s41467-019-08769-y] [Citation(s) in RCA: 34] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2018] [Accepted: 01/23/2019] [Indexed: 01/15/2023]  Open
5
Lubock NB, Zhang D, Sidore AM, Church GM, Kosuri S. A systematic comparison of error correction enzymes by next-generation sequencing. Nucleic Acids Res 2017;45:9206-9217. [PMID: 28911123 PMCID: PMC5587813 DOI: 10.1093/nar/gkx691] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2017] [Revised: 07/14/2017] [Accepted: 07/31/2017] [Indexed: 11/13/2022]  Open
6
Banasik M, Stanisławska-Sachadyn A, Hildebrandt E, Sachadyn P. In vitro affinity of Deinococcus radiodurans MutS towards mismatched DNA exceeds that of its orthologues from Escherichia coli and Thermus thermophilus. J Biotechnol 2017;252:55-64. [PMID: 28506931 DOI: 10.1016/j.jbiotec.2017.05.010] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2017] [Revised: 04/29/2017] [Accepted: 05/11/2017] [Indexed: 10/19/2022]
7
Wan W, Wang D, Gao X, Hong J. Immobilized MutS-Mediated Error Removal of Microchip-Synthesized DNA. Methods Mol Biol 2017;1472:217-235. [PMID: 27671944 DOI: 10.1007/978-1-4939-6343-0_17] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
8
Hingorani MM. Mismatch binding, ADP-ATP exchange and intramolecular signaling during mismatch repair. DNA Repair (Amst) 2016;38:24-31. [PMID: 26704427 PMCID: PMC4740199 DOI: 10.1016/j.dnarep.2015.11.017] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2015] [Revised: 09/08/2015] [Accepted: 11/30/2015] [Indexed: 12/16/2022]
9
Chang K, Deng S, Chen M. Novel biosensing methodologies for improving the detection of single nucleotide polymorphism. Biosens Bioelectron 2015;66:297-307. [DOI: 10.1016/j.bios.2014.11.041] [Citation(s) in RCA: 46] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2014] [Revised: 10/28/2014] [Accepted: 11/20/2014] [Indexed: 12/11/2022]
10
Khoshfetrat SM, Mehrgardi MA. Amplified electrochemical genotyping of single-nucleotide polymorphisms using a graphene–gold nanoparticles modified glassy carbon platform. RSC Adv 2015. [DOI: 10.1039/c5ra03794h] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]  Open
11
Wan W, Li L, Xu Q, Wang Z, Yao Y, Wang R, Zhang J, Liu H, Gao X, Hong J. Error removal in microchip-synthesized DNA using immobilized MutS. Nucleic Acids Res 2014;42:e102. [PMID: 24829454 PMCID: PMC4081059 DOI: 10.1093/nar/gku405] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]  Open
12
DeRocco VC, Sass LE, Qiu R, Weninger KR, Erie DA. Dynamics of MutS-mismatched DNA complexes are predictive of their repair phenotypes. Biochemistry 2014;53:2043-52. [PMID: 24588663 PMCID: PMC3985873 DOI: 10.1021/bi401429b] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
13
Slow conformational changes in MutS and DNA direct ordered transitions between mismatch search, recognition and signaling of DNA repair. J Mol Biol 2013;425:4192-205. [PMID: 23973435 DOI: 10.1016/j.jmb.2013.08.011] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2013] [Revised: 08/12/2013] [Accepted: 08/13/2013] [Indexed: 01/04/2023]
14
Highly sensitive and selective colorimetric genotyping of single-nucleotide polymorphisms based on enzyme-amplified ligation on magnetic beads. Biosens Bioelectron 2012;36:89-94. [DOI: 10.1016/j.bios.2012.03.045] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2012] [Revised: 03/26/2012] [Accepted: 03/29/2012] [Indexed: 11/22/2022]
15
Large conformational changes in MutS during DNA scanning, mismatch recognition and repair signalling. EMBO J 2012;31:2528-40. [PMID: 22505031 DOI: 10.1038/emboj.2012.95] [Citation(s) in RCA: 65] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2011] [Accepted: 03/21/2012] [Indexed: 12/18/2022]  Open
16
Detection of the strand exchange reaction using DNAzyme and Thermotoga maritima recombinase A. Anal Biochem 2012;421:313-20. [DOI: 10.1016/j.ab.2011.11.006] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2011] [Revised: 10/22/2011] [Accepted: 11/09/2011] [Indexed: 11/23/2022]
17
Jeong C, Cho WK, Song KM, Cook C, Yoon TY, Ban C, Fishel R, Lee JB. MutS switches between two fundamentally distinct clamps during mismatch repair. Nat Struct Mol Biol 2011;18:379-85. [PMID: 21278758 PMCID: PMC3060787 DOI: 10.1038/nsmb.2009] [Citation(s) in RCA: 105] [Impact Index Per Article: 8.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2010] [Accepted: 11/19/2010] [Indexed: 12/19/2022]
18
Kim S, Kim TG, Byon HR, Shin HJ, Ban C, Choi HC. Recognition of single mismatched DNA using MutS-immobilized carbon nanotube field effect transistor devices. J Phys Chem B 2009;113:12164-8. [PMID: 19685907 DOI: 10.1021/jp9063559] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
19
Wang K, Gao Y, Peng X, Yang G, Gao F, Li S, Zhu Y. Using FAM labeled DNA oligos to do RNA electrophoretic mobility shift assay. Mol Biol Rep 2009;37:2871-5. [PMID: 19784797 DOI: 10.1007/s11033-009-9841-7] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2009] [Accepted: 09/15/2009] [Indexed: 11/30/2022]
20
Lopez-Crapez E, Malinge JM, Gatchitch F, Casano L, Langlois T, Pugnière M, Roquet F, Mathis G, Bazin H. A homogeneous resonance energy transfer-based assay to monitor MutS/DNA interactions. Anal Biochem 2008;383:301-6. [PMID: 18824153 DOI: 10.1016/j.ab.2008.09.004] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2008] [Revised: 08/29/2008] [Accepted: 09/03/2008] [Indexed: 10/21/2022]
21
Cho M, Han MS, Ban C. Detection of mismatched DNAs via the binding affinity of MutS using a gold nanoparticle-based competitive colorimetric method. Chem Commun (Camb) 2008:4573-5. [DOI: 10.1039/b811346g] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
22
Nag N, Rao BJ, Krishnamoorthy G. Altered dynamics of DNA bases adjacent to a mismatch: a cue for mismatch recognition by MutS. J Mol Biol 2007;374:39-53. [PMID: 17919654 DOI: 10.1016/j.jmb.2007.08.065] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2007] [Revised: 08/27/2007] [Accepted: 08/27/2007] [Indexed: 10/22/2022]
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