Amperometric sulfide detection using Coprinus cinereus peroxidase immobilized on screen printed electrode in an enzyme inhibition based biosensor

Electrochemical Detection of Gasotransmitters: Status and Roadmap

Gasotransmitters, including nitric oxide (NO), carbon monoxide (CO), and hydrogen sulfide (H2S), are a class of gaseous, endogenous signaling molecules that interact with one another in the regulation of critical cardiovascular, immune, and neurological processes. The development of analytical sensing mechanisms for gasotransmitters, especially multianalyte mechanisms, holds vast importance and constitutes a growing area of study. This review provides an overview of electrochemical sensing mechanisms with an emphasis on opportunities in multianalyte sensing. Electrochemical methods demonstrate good sensitivity, adequate selectivity, and the most well-developed potential for the multianalyte detection of gasotransmitters. Future research will likely address challenges with sensor stability and biocompatibility (i.e., sensor lifetime and cytotoxicity), sensor miniaturization, and multianalyte detection in biological settings.

β-Lactamase-Mediated Fragmentation: Historical Perspectives and Recent Advances in Diagnostics, Imaging, and Antibacterial Design

The discovery of β-lactam (BL) antibiotics in the early 20th century represented a remarkable advancement in human medicine, allowing for the widespread treatment of infectious diseases that had plagued humanity throughout history. Yet, this triumph was followed closely by the emergence of β-lactamase (BLase), a bacterial weapon to destroy BLs. BLase production is a primary mechanism of resistance to BL antibiotics, and the spread of new homologues with expanded hydrolytic activity represents a pressing threat to global health. Nonetheless, researchers have developed strategies that take advantage of this defense mechanism, exploiting BLase activity in the creation of probes, diagnostic tools, and even novel antibiotics selective for resistant organisms. Early discoveries in the 1960s and 1970s demonstrating that certain BLs expel a leaving group upon BLase cleavage have spawned an entire field dedicated to employing this selective release mechanism, termed BLase-mediated fragmentation. Chemical probes have been developed for imaging and studying BLase-expressing organisms in the laboratory and diagnosing BL-resistant infections in the clinic. Perhaps most promising, new antibiotics have been developed that use BLase-mediated fragmentation to selectively release cytotoxic chemical "warheads" at the site of infection, reducing off-target effects and allowing for the repurposing of putative antibiotics against resistant organisms. This Review will provide some historical background to the emergence of this field and highlight some exciting recent reports that demonstrate the promise of this unique release mechanism.

Recombinant Arthromyces ramosus Peroxidase Has Similar Substrate Specificity Profiles as, but a Catalytic Efficiency up to 11-Fold Higher than, Horseradish Peroxidase

Fungal peroxidases are valuable enzymes. Arthromyces ramosus peroxidase (ARP) and horseradish peroxidase (HRP) share a conserved catalytic site. Both native ARP and recombinant ARP (rARP) were not commercially available. The substrate specificity and kinetic parameters of rARP and HRP were not well compared, particularly relevent to structure-activity relationship. In this work, rARP expressed by Komagataella phaffii had a production yield of 6.2 mg/L, up to 155-fold higher than ARP and other recombinant peroxidases, and a specific activity of 3240 units/mg toward 2,2'-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid) (ABTS), up to 29-fold higher than HRP and other peroxidases. The Michaelis constant (K_m) and first-order rate constant (k_cat) of rARP showed 10-fold substrate affinity and consequently 6-fold catalytic efficiency of HRP toward ABTS. Under optimal conditions, rARP shared similar substrate specificity profiles as commercial HRP; the second-order rate constants (k_app) of rARP showed 2-11-fold catalytic efficiency of HRP toward well-known peroxidase substrates. rARP's higher catalytic efficiency was also in agreement with the shorter binding distance of H/N-His⁵⁶ in rARP/substrate in comparison to that of HRP/substrate, as illustrated by docking simulation. The rARP had similar substrate specificity profiles as, but higher specific activity and catalytic efficiency than, HRP, which merits its further structure-functional characterization and applications.

Growth of large-scale MoS2 nanosheets on double layered ZnCo2O4 for real-time in situ H2S monitoring in live cells

There is an urgent need to develop in situ sensors that monitor the continued release of H2S from biological systems to understand H2S-related pathology and pharmacology. For this purpose, we have developed a molybdenum disulfide supported double-layered zinc cobaltite modified carbon cloth electrode (MoS2-ZnCo2O4-ZnCo2O4) based electrocatalytic sensor. The results of our study suggest that the MoS2-ZnCo2O4-ZnCo2O4 electrode has excellent electrocatalytic ability to oxidize H2S at physiological pH, in a minimized overpotential (+0.20 vs. Ag/AgCl) with an amplified current signal. MoS2 grown on double-layered ZnCo2O4 showed relatively better surface properties and electrochemical properties than MoS2 grown on single-layered ZnCo2O4. The sensor delivered excellent analytical parameters, such as low detection limit (5 nM), wide linear range (10 nM-1000 μM), appreciable stability (94.3%) and high selectivity (2.5-fold). The practicality of the method was tested in several major biological fluids. The electrode monitors the dynamics of bacterial H2S in real-time for up to 5 h with good cell viability. Our research shows that MoS2-ZnCo2O4-ZnCo2O4/carbon cloth is a robust and sensitive electrode to understand how bacteria seek to adjust their defense strategies under exogenously induced stress conditions.

A unique off-on near-infrared QCy7-derived probe for selective detection and imaging of hydrogen sulfide in cells and in vivo

Hydrogen sulfide (H₂S) has been found to be an important biological regulator that plays important roles in many physiological and pathological processes. Near-infrared (NIR) fluorescent probes capable of selectively detecting H₂S in vivo will be useful tools to understand its mechanisms in biological processes. Herein, we reported an easily synthesized and stimuli-responsive NIR fluorescent probe (QCy7-HS) for selective evaluation of endogenous H₂S in the living cells and mice. In response to cellular H₂S stimulus, QCy7-HS is converted to QCy7 and shows a unique off-on near-infrared fluorescence signal change. The results of selectivity and kinetic studies indicated that our probe has high H₂S binding capacity. Therefore, this probe was used for the fluorescence detection of H₂S in cells. Moreover, the probe was applied for study exogenous and endogenous H₂S in live mice, indicating that the new probe can be used as an efficient tool on H₂S related events in living animals.

New Trimodal Phenotypic Reporter of Extended-Spectrum β-Lactamase Activity

Bacterial resistance to β-lactam antibiotics continues to grow as misadministration presents evolutionary pressure that drives bacteria to develop improved resistance enzymes. Known as extended-spectrum β-lactamases (ESBLs), these enzymes are capable of hydrolyzing advanced β-lactam antibiotics such as third-generation (and higher) cephalosporins. Phenotypic detection substrates can be used to rapidly identify a cultured patient sample prior to confirmation by more exhaustive but slower means, critically aiding in the antibiotic stewardship essential in maintaining the effectiveness of not only the cephalosporins but also indirectly the carbapenems, our last-resort β-lactams. To enhance the phenotypic detection arsenal, we have designed an ESBL detection substrate that releases a glucose molecule upon β-lactamase hydrolysis. Because many forms of detection for glucose exist, the substrate enables ESBL quantification via three modalities commonly found in the clinical laboratory: optical absorbance, for use with the most common microbiology platforms; fluorescence, for enhanced sensitivity; and electrochemistry, which offers the potential for integration into a hand-held platform similar to a personal glucometer. Moreover, we demonstrate that, as opposed to currently available phenotypic detection substrates, our new substrate is engineered to be resistant to older and narrower β-lactamases, thus enabling specific identification of newer and more dangerous ESBLs.

Roles of Water Molecules and Counterion on HS- Sensing Reaction Utilizing a Pyrylium Derivative: A Computational Study

In this paper, we present a comprehensive computational study on the hydrogen sulfide ion (HS^-) sensing mechanism in aqueous solution using pyrylium-thiopyrylium transformation. Explicit water molecules up to three water molecules are considered using supramolecular models. The effect of water bulk solvent is also taken into account according to the polarizable continuum model. Our results demonstrate that water molecules are directly involved in the sensing reactions by altering reaction mechanisms and dramatically lower the activation energies. The most favorable HS^- sensing mechanism involves a 10-membered ring transition structure formed by three water molecules and one hydronium. The catalytic effects of water molecule(s) due to the alleviation of ring strain and the stabilization from deprotonated hydronium significantly lower the activation energy. The activation energies in aqueous solution decrease from 40.2 kcal/mol for the hydronium-only-catalyzed reaction to 15.7, 14.8, and 7.4 kcal/mol for one-water-, two-water-, and three-water-catalyzed mechanisms, respectively. In addition, the effect of the counterion tetrafluoroborate (BF₄^-) on the reaction mechanisms was also investigated. Our results demonstrate that the counterion BF₄^- most likely behaves as a spectator and has minor influence on the reaction mechanism.

Hierarchical CNTs@CuMn Layered Double Hydroxide Nanohybrid with Enhanced Electrochemical Performance in H2S Detection from Live Cells

The precise monitoring of H₂S has aroused immense research interest in the biological and biomedical fields since it is exposed as a third endogenous gasotransmitter. Hence, there is an urgent requisite to explore an ultrasensitive and economical H₂S detection system. Herein, we report a simple strategy to configure an extremely sensitive electrochemical sensor with a 2D nanosheet-shaped layered double hydroxide (LDH) wrapped carbon nanotubes (CNTs) nanohybrid (CNTs@LDH), where a series of CNTs@CuMn-LDH nanohybrids with varied amounts of LDH nanosheets grafted on a conductive CNTs backbone has been synthesized via a facile coprecipitation approach. Taking advantage of the unique core-shell structure, the integrated electrochemically active CuMn-LDH nanosheets on the conductive CNTs scaffold, the maximum interfacial collaboration, and the superior specific surface area with a plethora of surface active sites and ultrathin LDH layers, the as-prepared CNTs@CuMn-LDH nanoarchitectures have exhibited superb electrocatalytic activity toward H₂S oxidation. Under the optimum conditions, the electrochemical sensor based on the CNTs@CuMn-LDH nanohybrid shows remarkable sensing performances for H₂S determination in terms of a wide linear range and a low detection limit of 0.3 nM (S/N = 3), high selectivity, reproducibility, and durability. With marvelous efficiency achieved, the proposed sensing platform has been practically used in in situ detection of abiotic H₂S efflux produced by sulfate reducing bacteria and real-time in vitro tracking of H₂S concentrations from live cells after being excreted by a stimulator which in turn might serve as early diseases diagnosis. Thus, our core-shell hybrid nanoarchitectures fabricated via structural integration strategy will open new horizons in material synthesis, biosensing systems, and clinical chemistry.

Novel microfluidic graphene oxide-protein amperometric biosensor for detecting sulfur compounds

Sulfur compounds are essential for many industries and organisms; however, they cause serious respiratory problems in human beings. Therefore, determination of sulfur concentration is of paramount importance. The research approach in the field of detecting contaminants has led to smaller systems that provide faster and more effective ways for diagnosis purposes. In this study, a novel portable amperometric graphene oxide-protein biosensor platform is investigated. The main characteristic of this structure is the implementation of a microfluidic configuration. With albumin metalloprotein as the biorecognition element, graphene oxide was synthesized and characterized by transmission electron microscopy and Fourier-transform infrared spectroscopy (FTIR). Albumin protein was stabilized on the surface of graphene oxide by the application of the N-(3-dimethylamionpropyl)-N-ethylcarbodiimide hydrochloride/N-hydroxysuccinimide method. The stabilization was confirmed by FTIR and electrochemistry analyses. The calibration curve of sulfur concentration was determined. When the graphene oxide-protein complex was stabilized by nephion on the surface of the microfluidic system, the response time reduced to 50 Sec, which is a relatively faster response among the similar studies and validated the significant effect of the microfluidic system. The nanosystem had an optimized pH of 7.4 and exhibited high sensitivity in determining sulfide. The results confirm that the portable graphene oxide-protein nanosystem has a fast and accurate response in detecting sulfide.

Detection of Sulfide Using Mercapto Tetrazine-Protected Fluorescent Gold Nanodots: Preparation of Paper-Based Testing Kit for On-Site Monitoring

This work demonstrates the development of a highly sensitive method to detect and quantify sulfide ions (S^2-) in water samples. First, we synthesized 6-mercapto-s-triazolo(4,3-b)-s-tetrazine (MTT) by the reaction between formaldehyde and 4-amino-3-hydrazino-5-mercapto-1,2,4-triazole at room temperature. The synthetic MTT was used as a capping ligand for the synthesis of gold nanodots (AuNDs) via a one-pot green method at room temperature with only a 10 min reaction time. Transmission electron microscopy images exhibited that the MTT-AuNDs have an average particle size of 1.9 nm and an emission maximum at 672 nm upon excitation at 360 nm. The synthesized highly red emissive MTT-AuNDs are used as specific fluorescent probes for the detection of S^2-. The fluorescence of MTT-AuNDs was significantly and dose-dependently quenched by the addition of S^2-. The observed fluorescence quenching was ascribed to the formation of an Au₂S complex, which was determined by Raman and mass spectroscopy. A good linearity was achieved for the increasing concentration of S^2- from 870 nM to 16 μM, and the detection limit was found to be 2 nM (S/N = 3). The S^2- detection system that is described in this study was validated and agreed well with the standard methylene blue method. Furthermore, the present sensor was examined for its use in quantifying S^2- in real water samples obtained from lakes and rivers. In addition, the specificity was checked against the most likely ion interferences in real water. Moreover, a cost-effective and viable paper-based S^2- sensor was fabricated for environmental monitoring based on the use of MTT-AuNDs. The developed system would be an environmentally friendly and easy-to-use detection device for S^2- in water.

Reaction-based bi-signaling chemodosimeter probe for selective detection of hydrogen sulfide and cellular studies

A new quinoline-indolium-based chemical probe (DPQI) was synthesized and characterized for selective detection of hydrogen sulphide (H₂S).

Amperometric inhibitive biosensor based on horseradish peroxidase-nanoporous gold for sulfide determination

As a well-known toxic pollutant, sulfide is harmful to human health. In this study, a simple and sensitive amperometric inhibitive biosensor was developed for the determination of sulfide in the environment. By immobilizing nanoporous gold (NPG) on glassy carbon electrode (GCE), and encapsulating horseradish peroxidase (HRP) onto NPG, a HRP/NPG/GCE bioelectrode for sulfide detection was successfully constructed based on the inhibition of sulfide on HRP activity with o-Phenylenediamine (OPD) as a substrate. The resulted HRP/NPG/GCE bioelectrode achieved a wide linear range of 0.1–40 μM in sulfide detection with a high sensitivity of 1720 μA mM⁻¹ cm⁻² and a low detection limit of 0.027 μM. Additionally, the inhibition of sulfide on HRP is competitive inhibition with OPD as a substrate by Michaelis-Menten analysis. Notably, the recovery of HRP activity was quickly achieved by washing the HRP/NPG/GCE bioelectrode using differential pulse voltammetry (DPV) technique in deaerated PBS (50 mM, pH 7.0) for only 60 s. Furthermore, the real sample analysis of sulfide by the HRP/NPG/GCE bioelectrode was achieved. Based on above results, the HRP/NPG/GCE bioelectrode could be a better choice for the real determination of sulfide compared to inhibitive biosensors previously reported.

Electrochemical hydrogen sulfide biosensors

Biological application of electrochemical hydrogen sulfide sensors.

Recent advances in biosensors based on enzyme inhibition

Enzyme inhibitors like drugs and pollutants are closely correlated to human and environmental health, thus their monitoring is of paramount importance in analytical chemistry. Enzymatic biosensors represent cost-effective, miniaturized and easy to use devices; particularly biosensors based on enzyme inhibition are useful analytical tools for fast screening and monitoring of inhibitors. The present review will highlight the research carried out in the last 9 years (2006-2014) on biosensors based on enzyme inhibition. We underpin the recent advances focused on the investigation in new theoretical approachs and in the evaluation of biosensor performances for reversible and irreversible inhibitors. The use of nanomaterials and microfluidic systems as well as the applications of the various biosensors in real samples is critically reviewed, demonstrating that such biosensors allow the development of useful devices for a fast and reliable alarm system.

A comparison between determination of trace amounts of sulfide in the presence and absence of micelle particles in natural waters (Qazvin, Iran): a kinetic spectrophotometric approach

A new sensitive kinetic spectrophotometric method described for the determination of trace amounts of sulfides based on the addition reaction of sulfide ions with malachite green has been investigated in aqueous and micellar media at 25 °C. The variables affecting the rate of the reaction were investigated, and the optimum conditions were established. Under the optimum experimental conditions, decreases in the absorbance of malachite green at 615 nm in the absence and 630 nm in the presence of micelle particles, their λ max, were proportional to the concentrations of sulfide ions at the first 15 and 25 s from initiation of the reaction. The working curve was linear over the concentration range 50-1200 ng mL(-1) of sulfide ions with a fixed time method at the first 15 and 25 s from initiation of the reaction in aqueous medium and 25-1750 ng mL(-1) with a fixed time method at the first 15 s and 25-1500 ng mL(-1) for primitive 25 s in micellar medium. For the proposed kinetic method, the experimental and theoretical limit of detection (LOD) and limit of quantification (LOQ) in the presence and absence of micelle particles were obtained and tabulated at Δt = 15 and 25 s. The effective range concentration was achieved from the plot of Ringbom in both media and reported. Different surfactants, such as nonionic surfactant (Triton-X100), anionic surfactant sodium dodecyl sulfate (SDS), and cationic surfactant cetyltrimethylammonium bromide (CTAB) and cetylpyridinium chloride (CPC), were investigated and Triton X-100 selected as a suitable surfactant. To valuable vision into the reaction pathways, pseudo-first-order condition was applied and different kinetic parameters like ΔG (≠), ΔE (≠), ΔS (≠), and ΔH (≠) computed. The 2:1 stoichiometry of malachite green to sulfide ions was indicated by the results of mole ratio and Job's method of continuous variation. The effect of different environments on the interfering of various ions on sulfide determination with the suggested method was studied, and final results have been presented. To investigate the usefulness of the different media of the proposed method, sulfide ions were determined in natural waters such as river and spring samples without any purification or using masking reagents.

Fluorescent sensing of sulfide ions based on papain-directed gold nanoclusters

This fluorescence sensing system showed excellent performance and could be applied to the determination of S²⁻ in natural water samples.

Unusual Fe(CN)₆³⁻/⁴⁻ capture induced by synergic effect of electropolymeric cationic surfactant and graphene: characterization and biosensing application

Herein, a special microheterogeneous system for Fe(CN)6(3-/4-) capture was constructed based on graphene (GN) and the electropolymeric cationic surfactant, an amphiphilic pyrrole derivative, (11-pyrrolyl-1-yl-undecyl) triethylammonium tetrafluoroborate (A2). The morphology of the system was characterized by scanning electron microscope. The redox properties of the entrapped Fe(CN)6(3-/4-) were investigated by cyclic voltammetry and UV-visible spectrometry. The entrapped Fe(CN)6(3-/4-) exhibited highly electroactive with stable and symmetrical cyclic voltammetric signal. A dramatic negative shift in the half wave potential can be obtained due to the unusual Fe(CN)6(3-/4-) partitioning in in this microheterogeneous system based on poly(A2+GN). Finally, the entrapped Fe(CN)6(3-/4-) was applied in the construction of the enhanced biosensors to hydrogen peroxide and sulfide.

Amperometric inhibition biosensors based on horseradish peroxidase and gold sononanoparticles immobilized onto different electrodes for cyanide measurements

New biosensors based on inhibition for the detection of cyanide and the comparison of the analytical performances of nine enzyme biosensor designs by using three different electrodes: Sonogel-Carbon, glassy carbon and gold electrodes were discussed. Three different horseradish peroxidase immobilization procedures with and without gold sononanoparticles were studied. The amperometric measurements were performed at an applied potential of -0.15V vs. Ag/AgCl in 50mM sodium acetate buffer solution pH=5.0. The apparent kinetic parameters (Kmapp, Vmaxapp) of immobilized HRP were calculated in the absence of inhibitor (cyanide) by using caffeic acid, hydroquinone, and catechol as substrates. The presence of gold sononanoparticles enhanced the electron transfer reaction and improved the analytical performance of the biosensors. The HRP kinetic interactions reveal non-competitive binding of cyanide with an apparent inhibition constant (Ki) of 2.7μM and I50 of 1.3μM. The determination of cyanide can be achieved in a dynamic range of 0.1-58.6μM with a detection limit of 0.03μM which is lower than those reported by previous studies. Hence this biosensing methodology can be used as a new promising approach for detecting cyanide.

Spectrophotometric determination of sulfide based on peroxidase inhibition by detection of purpurogallin formation

This paper presents a new method for spectrophotometirc detection of sulfide applying fungal peroxidase immobilized on sodium alginate. The sensing scheme was based on decrease of the absorbance of the orange compound, purpurogallin produced from pyrogallol and H2O2 as substrates, due to the inhibition of peroxidase by sulfide. Absorbance of purpurogallin was detected at 420nm by using a spectrophotometer. The proposed method could successfully detect the sulfide in the concentration range of 0.6-7.0μM with a detection limit of 0.4μM. The kinetic parameters of Michaelis-Menten with and without sulfide were also calculated. Possible inhibition mechanism of peroxidase by sulfide was deduced according to the variation of parameters and uncompetitive mechanism was observed with respect to hydrogen peroxide. The current method provides an easy to use method for sulfide detection in water samples.

Selective spectrofluorimetric determination of sulfide ion using manganese doped ZnS quantum dots as luminescent probe

This work reports a spectrofluorimetric method for selective and sensitive determination of sulfide ion in aqueous solution. The ultra-small zinc sulfide quantum dots (QDs) doped with manganese (ZnS:Mn) were synthesized by using a simple and fast procedure based on the co-precipitation of nanoparticles in aqueous solution in the presence of 2-mercaptoethanol, as capping agent. The nanoparticles have exhibited two strong fluorescent emissions at about 424 and 594 nm. Luminescent surface-capped ZnS:Mn QDs, with particle size below 5 nm, have been applied for determination of sulfide anions in water samples. Under the optimum conditions, the fluorescence intensity of ZnS:Mn QDs is linearly proportional to the sulfide ion concentration in the range 1.2×10(-6) to 2.6×10(-5) mol L(-1) with a detection limit as 3.3×10(-7) mol L(-1). The relative standard deviation for five replicate measurements (for 8.0×10(-6) mol L(-1) of S(2-)) was obtained to be 2.6%. It was founded that the interference of the other anions was negligible on the quantitive determination of sulfide ion.

Biosensors based on enzyme inhibition

The present chapter describes the use of biosensors based on enzyme inhibition as analytical tools. The parameters that affect biosensor sensitivity, such as the amount of immobilized enzyme, incubation time, and immobilization type, were critically evaluated, highlighting how the knowledge of enzymatic kinetics can help researchers optimize the biosensor in an easy and fast manner. The applications of these biosensors demonstrating their wide application have been reported. The objective of this survey is to give a critical description of biosensors based on enzyme inhibition, of their assembly, and their application in the environmental, food, and pharmaceutical fields.