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Melo RLF, Neto FS, Dari DN, Fernandes BCC, Freire TM, Fechine PBA, Soares JM, Dos Santos JCS. A comprehensive review on enzyme-based biosensors: Advanced analysis and emerging applications in nanomaterial-enzyme linkage. Int J Biol Macromol 2024; 264:130817. [PMID: 38479669 DOI: 10.1016/j.ijbiomac.2024.130817] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2023] [Revised: 02/20/2024] [Accepted: 03/10/2024] [Indexed: 04/10/2024]
Abstract
Biosensors with nanomaterials and enzymes detect and quantify specific targets in samples, converting recognition into measurable signals. The study explores the intrinsic synergy between these elements for detecting and quantifying particular targets in biological and environmental samples, with results demonstrated through bibliometric analysis and a comprehensive review of enzyme-based biosensors. Using WoS, 57,331 articles were analyzed and refined to 880. Key journals, countries, institutions, and relevant authors were identified. The main areas highlighted the multidisciplinary nature of the field, and critical keywords identified five thematic clusters, revealing the primary nanoparticles used (CNTs, graphene, AuNPs), major application fields, basic application themes, and niche topics such as sensitive detection, peroxidase activity, and quantum dot utilization. The biosensor overview covered nanomaterials and their primary applications, addressing recent advances and inherent challenges. Patent analysis emphasized the U.S. leadership in the industrial sector, contrasting with China's academic prominence. Future studies should focus on enhancing biosensor portability and analysis speed, with challenges encompassing efficient integration with recent technologies and improving stability and reproducibility in the nanomaterial-enzyme interaction.
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Affiliation(s)
- Rafael Leandro Fernandes Melo
- Departamento de Engenharia Metalúrgica e de Materiais, Universidade Federal do Ceará, Campus do Pici, Bloco 729, CEP 60440-554 Fortaleza, CE, Brazil; Grupo de Química de Materiais Avançados (GQMat), Departamento de Química Analítica e Físico-Química, Universidade Federal do Ceará, Campus do Pici, CEP 60451-970 Fortaleza, CE, Brazil
| | - Francisco Simão Neto
- Departamento de Engenharia Química, Universidade Federal do Ceará, Campus do Pici, CEP 60455-760 Fortaleza, CE, Brazil
| | - Dayana Nascimento Dari
- Instituto de Engenharias e Desenvolvimento Sustentável, Universidade da Integração Internacional da Lusofonia Afro-Brasileira, Campus das Auroras, CEP 62790-970 Redenção, CE, Brazil
| | - Bruno Caio Chaves Fernandes
- Departamento de Agronomia e Ciência Vegetais, Universidade Federal Rural do Semi-Árido, Campus Mossoró, Mossoró CEP 59625-900, RN, Brazil
| | - Tiago Melo Freire
- Grupo de Química de Materiais Avançados (GQMat), Departamento de Química Analítica e Físico-Química, Universidade Federal do Ceará, Campus do Pici, CEP 60451-970 Fortaleza, CE, Brazil
| | - Pierre Basílio Almeida Fechine
- Grupo de Química de Materiais Avançados (GQMat), Departamento de Química Analítica e Físico-Química, Universidade Federal do Ceará, Campus do Pici, CEP 60451-970 Fortaleza, CE, Brazil
| | - João Maria Soares
- Departamento de Física, Universidade do Estado do Rio Grande do Norte, Campus Mossoró, Mossoró CEP 59610-090, RN, Brazil.
| | - José Cleiton Sousa Dos Santos
- Instituto de Engenharias e Desenvolvimento Sustentável, Universidade da Integração Internacional da Lusofonia Afro-Brasileira, Campus das Auroras, CEP 62790-970 Redenção, CE, Brazil.
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2
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Kotsiri Z, Vidic J, Vantarakis A. Applications of biosensors for bacteria and virus detection in food and water-A systematic review. J Environ Sci (China) 2022; 111:367-379. [PMID: 34949365 DOI: 10.1016/j.jes.2021.04.009] [Citation(s) in RCA: 37] [Impact Index Per Article: 18.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2020] [Revised: 04/11/2021] [Accepted: 04/11/2021] [Indexed: 05/09/2023]
Abstract
Biosensors for sensitive and specific detection of foodborne and waterborne pathogens are particularly valued for their portability, usability, relatively low cost, and real-time or near real-time response. Their application is widespread in several domains, including environmental monitoring. The main limitation of currently developed biosensors is a lack of sensitivity and specificity in complex matrices. Due to increased interest in biosensor development, we conducted a systematic review, complying with the PRISMA guidelines, covering the period from January 2010 to December 2019. The review is focused on biosensor applications in the identification of foodborne and waterborne microorganisms based on research articles identified in the Pubmed, ScienceDirect, and Scopus search engines. Efforts are still in progress to overcome detection limitations and to provide a rapid detection system which will safeguard water and food quality. The use of biosensors is an essential tool with applicability in the evaluation and monitoring of the environment and food, with great impact in public health.
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Affiliation(s)
- Zoi Kotsiri
- Environmental and Microbiology Unit, Department of Public Health, Medical School, University of Patras 26504, Greece
| | - Jasmina Vidic
- INRAE, AgroParisTech, Micalis Institute, University of Paris-Saclay, 78350 Jouy-en-Josas, France
| | - Apostolos Vantarakis
- Environmental and Microbiology Unit, Department of Public Health, Medical School, University of Patras 26504, Greece.
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3
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Babaie P, Saadati A, Hasanzadeh M. Recent progress and challenges on the bioassay of pathogenic bacteria. J Biomed Mater Res B Appl Biomater 2020; 109:548-571. [PMID: 32924292 DOI: 10.1002/jbm.b.34723] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2020] [Revised: 07/20/2020] [Accepted: 09/02/2020] [Indexed: 12/19/2022]
Abstract
The present review (containing 242 references) illustrates the importance and application of optical and electrochemical methods as well as their performance improvement using various methods for the detection of pathogenic bacteria. The application of advanced nanomaterials including hyper branched nanopolymers, carbon-based materials and silver, gold and so on. nanoparticles for biosensing of pathogenic bacteria was also investigated. In addition, a summary of the applications of nanoparticle-based electrochemical biosensors for the identification of pathogenic bacteria has been provided and their advantages, detriments and future development capabilities was argued. Therefore, the main focus in the present review is to investigate the role of nanomaterials in the development of biosensors for the detection of pathogenic bacteria. In addition, type of nanoparticles, analytes, methods of detection and injection, sensitivity, matrix and method of tagging are also argued in detail. As a result, we have collected electrochemical and optical biosensors designed to detect pathogenic bacteria, and argued outstanding features, research opportunities, potential and prospects for their development, according to recently published research articles.
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Affiliation(s)
- Parinaz Babaie
- Pharmaceutical Analysis Research Center, Tabriz University of Medical Sciences, Tabriz, Iran.,Food and Drug safety Research Center, Tabriz University of Medical Sciences, Tabriz, Iran
| | - Arezoo Saadati
- Nutrition Research Center, Tabriz University of Medical Sciences, Tabriz, Iran
| | - Mohammad Hasanzadeh
- Pharmaceutical Analysis Research Center, Tabriz University of Medical Sciences, Tabriz, Iran
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4
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Qiu G, Yue Y, Tang J, Zhao YB, Wang J. Total Bioaerosol Detection by a Succinimidyl-Ester-Functionalized Plasmonic Biosensor To Reveal Different Characteristics at Three Locations in Switzerland. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2020; 54:1353-1362. [PMID: 31909609 DOI: 10.1021/acs.est.9b05184] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
Abstract
Bioaerosols consisting of biologically originated airborne particles such as microbes, metabolites, toxins, and fragments of microorganisms are present ubiquitously in our living environment. The international interests in bioaerosols have rapidly increased because of their many potential health effects. Thus, accurate and fast detection of total bioaerosols in different environments has become an important task for safeguarding against biological threats and broadening the pool of bioaerosol knowledge. To quickly evaluate the total bioaerosol concentration, we developed a localized surface plasmon resonance biosensor based on succinimidyl-ester-functionalized gold nanoislands (SEF-AuNIs) for quantitative bioaerosol detection. The detection limit of our proposed SEF-AuNI sensors for model bacteria Escherichia coli and Bacillus subtilis can go to 0.5119 and 1.69 cells/mL, respectively. To demonstrate the capability of this bioaerosol sensing technique, we tested aerosol samples collected from Bern (urban station), Basel (suburban station), and Rigi mountain (rural and high altitude station) in Switzerland and further investigated the correlation with endotoxin and PM10. The results substantiated that our SEF-AuNI sensors could be a reliable candidate for total bioaerosol detection and air quality assessment.
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Affiliation(s)
- Guangyu Qiu
- Institute of Environmental Engineering , ETH Zürich , Zürich 8093 , Switzerland
- Laboratory for Advanced Analytical Technologies , Empa, Swiss Federal Laboratories for Materials Science and Technology , Dübendorf 8600 , Switzerland
| | - Yang Yue
- Institute of Environmental Engineering , ETH Zürich , Zürich 8093 , Switzerland
- Laboratory for Advanced Analytical Technologies , Empa, Swiss Federal Laboratories for Materials Science and Technology , Dübendorf 8600 , Switzerland
| | - Jiukai Tang
- Institute of Environmental Engineering , ETH Zürich , Zürich 8093 , Switzerland
- Laboratory for Advanced Analytical Technologies , Empa, Swiss Federal Laboratories for Materials Science and Technology , Dübendorf 8600 , Switzerland
| | - Yi-Bo Zhao
- Institute of Environmental Engineering , ETH Zürich , Zürich 8093 , Switzerland
- Laboratory for Advanced Analytical Technologies , Empa, Swiss Federal Laboratories for Materials Science and Technology , Dübendorf 8600 , Switzerland
| | - Jing Wang
- Institute of Environmental Engineering , ETH Zürich , Zürich 8093 , Switzerland
- Laboratory for Advanced Analytical Technologies , Empa, Swiss Federal Laboratories for Materials Science and Technology , Dübendorf 8600 , Switzerland
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5
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Li Y, Zhu Y, Wang C, He M, Lin Q. Selective detection of water pollutants using a differential aptamer-based graphene biosensor. Biosens Bioelectron 2018; 126:59-67. [PMID: 30391910 DOI: 10.1016/j.bios.2018.10.047] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2018] [Revised: 10/19/2018] [Accepted: 10/22/2018] [Indexed: 12/11/2022]
Abstract
Graphene field-effect transistor (GFET) sensors are an attractive analytical tool for the detection of water pollutants. Unfortunately, this application has been hindered by the sensitivity of such sensors to nonspecific disturbances caused by variations of environmental conditions. Incorporation of differential designs is a logical choice to address this issue, but this has been difficult for GFET sensors due to the impact of fabrication processes and material properties. This paper presents a differential GFET affinity sensor for the selective detection of water pollutants in the presence of nonspecific disturbances. This differential design allows for minimization of the effects of variations of environmental conditions on the measurement accuracy. In addition, to mitigate the impact of the fabrication process and material property variations, we introduce a compensation scheme for the individual sensing units of the sensor, so that such variations are accounted for in the compensation-based differential sensing method. We test the use of this differential sensor for the selective detection of the water pollutant 17β-estradiol in buffer and tap water. Consistent detection results can be obtained with and without interferences of pH variations, and in tap water where unknown interferences are present. These results demonstrate that the differential graphene affinity sensor is capable of effectively mitigating the effects of nonspecific interferences to enable selective water pollutant detection for water quality monitoring.
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Affiliation(s)
- Yijun Li
- Department of Mechanical Engineering, Columbia University, New York, NY 10027, USA; Center for Sensor Technology of Environment and Health, State Key Joint Laboratory of ESPC, School of Environment, Tsinghua University, Beijing 100084, China
| | - Yibo Zhu
- Department of Mechanical Engineering, Columbia University, New York, NY 10027, USA
| | - Cheng Wang
- Center for Sensor Technology of Environment and Health, State Key Joint Laboratory of ESPC, School of Environment, Tsinghua University, Beijing 100084, China; College of Electronic and Communication Engineering, Tianjin Normal University, Tianjin 300387, China
| | - Miao He
- Center for Sensor Technology of Environment and Health, State Key Joint Laboratory of ESPC, School of Environment, Tsinghua University, Beijing 100084, China.
| | - Qiao Lin
- Department of Mechanical Engineering, Columbia University, New York, NY 10027, USA.
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Sijbrandij T, Ligtenberg AJ, Nazmi K, van den Keijbus PAM, Veerman ECI, Bolscher JGM, Bikker FJ. LFchimera protects HeLa cells from invasion by Yersinia spp. in vitro. Biometals 2018; 31:941-950. [PMID: 30136243 PMCID: PMC6245033 DOI: 10.1007/s10534-018-0136-0] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2018] [Accepted: 08/17/2018] [Indexed: 11/30/2022]
Abstract
Yersinia pestis is the causative agent of plague. As adequate antibiotic treatment falls short and currently no effective vaccine is available, alternative therapeutic strategies are needed. In order to contribute to solving this problem we investigated the therapeutic potential of the peptide construct LFchimera against the safer-to-handle Y. pestis simulants Yersinia enterocolitica and Yersinia pseudotuberculosis in vitro. LFchimera is a heterodimeric peptide construct mimicking two antimicrobial domains of bovine lactoferrin, i.e. lactoferrampin and lactoferricin. LFchimera has been shown to be a potent antimicrobial peptide against a variety of bacteria in vitro and in vivo. Also Y. enterocolitica and Y. pseudotuberculosis have been shown to be susceptible for LFchimera in vitro. As Yersiniae spp. adhere to and invade host cells upon infection, we here investigated the effects of LFchimera on these processes. It was found that LFchimera has the capacity to inhibit host-cell invasion by Yersiniae spp. in vitro. This effect appeared to be host-cell mediated, not bacteria-mediated. Furthermore it was found that exposure of human HeLa epithelial cells to both LFchimera and the bacterial strains evoked a pro-inflammatory cytokine release from the cells in vitro.
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Affiliation(s)
- Tjitske Sijbrandij
- Department of Oral Biochemistry, Academic Centre for Dentistry Amsterdam, University of Amsterdam and VU University Amsterdam, Gustav Mahlerlaan 3004, 1081 LA, Amsterdam, The Netherlands
| | - Antoon J Ligtenberg
- Department of Oral Biochemistry, Academic Centre for Dentistry Amsterdam, University of Amsterdam and VU University Amsterdam, Gustav Mahlerlaan 3004, 1081 LA, Amsterdam, The Netherlands
| | - Kamran Nazmi
- Department of Oral Biochemistry, Academic Centre for Dentistry Amsterdam, University of Amsterdam and VU University Amsterdam, Gustav Mahlerlaan 3004, 1081 LA, Amsterdam, The Netherlands
| | - Petra A M van den Keijbus
- Department of Oral Biochemistry, Academic Centre for Dentistry Amsterdam, University of Amsterdam and VU University Amsterdam, Gustav Mahlerlaan 3004, 1081 LA, Amsterdam, The Netherlands
| | - Enno C I Veerman
- Department of Oral Biochemistry, Academic Centre for Dentistry Amsterdam, University of Amsterdam and VU University Amsterdam, Gustav Mahlerlaan 3004, 1081 LA, Amsterdam, The Netherlands
| | - Jan G M Bolscher
- Department of Oral Biochemistry, Academic Centre for Dentistry Amsterdam, University of Amsterdam and VU University Amsterdam, Gustav Mahlerlaan 3004, 1081 LA, Amsterdam, The Netherlands
| | - Floris J Bikker
- Department of Oral Biochemistry, Academic Centre for Dentistry Amsterdam, University of Amsterdam and VU University Amsterdam, Gustav Mahlerlaan 3004, 1081 LA, Amsterdam, The Netherlands.
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7
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Hinman SS, McKeating KS, Cheng Q. Surface Plasmon Resonance: Material and Interface Design for Universal Accessibility. Anal Chem 2018; 90:19-39. [PMID: 29053253 PMCID: PMC6041476 DOI: 10.1021/acs.analchem.7b04251] [Citation(s) in RCA: 64] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Samuel S. Hinman
- Environmental Toxicology, University of California–Riverside, Riverside, California 92521, United States
| | - Kristy S. McKeating
- Department of Chemistry, University of California–Riverside, Riverside, California 92521, United States
| | - Quan Cheng
- Environmental Toxicology, University of California–Riverside, Riverside, California 92521, United States
- Department of Chemistry, University of California–Riverside, Riverside, California 92521, United States
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8
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Effects of lactoferrin derived peptides on simulants of biological warfare agents. World J Microbiol Biotechnol 2016; 33:3. [PMID: 27832504 PMCID: PMC5104768 DOI: 10.1007/s11274-016-2171-8] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2016] [Accepted: 11/03/2016] [Indexed: 11/21/2022]
Abstract
Lactoferrin (LF) is an important immune protein in neutrophils and secretory fluids of mammals. Bovine LF (bLF) harbours two antimicrobial stretches, lactoferricin and lactoferampin, situated in close proximity in the N1 domain. To mimic these antimicrobial domain parts a chimeric peptide (LFchimera) has been constructed comprising parts of both stretches (LFcin17–30 and LFampin265–284). To investigate the potency of this construct to combat a set of Gram positive and Gram negative bacteria which are regarded as simulants for biological warfare agents, the effect on bacterial killing, membrane permeability and membrane polarity were determined in comparison to the constituent peptides and the native bLF. Furthermore we aimed to increase the antimicrobial potency of the bLF derived peptides by cationic amino acid substitutions. Overall, the bactericidal activity of the peptides could be related to membrane disturbing effects, i.e. membrane permeabilization and depolarization. Those effects were most prominent for the LFchimera. Arginine residues were found to be crucial for displaying antimicrobial activity, as lysine to arginine substitutions resulted in an increased antimicrobial activity, affecting mostly LFampin265–284 whereas arginine to lysine substitutions resulted in a decreased bactericidal activity, predominantly in case of LFcin17–30.
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Sikarwar B, Singh VV, Sharma PK, Kumar A, Thavaselvam D, Boopathi M, Singh B, Jaiswal YK. DNA-probe-target interaction based detection of Brucella melitensis by using surface plasmon resonance. Biosens Bioelectron 2016; 87:964-969. [PMID: 27665519 DOI: 10.1016/j.bios.2016.09.063] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2016] [Revised: 09/16/2016] [Accepted: 09/17/2016] [Indexed: 12/20/2022]
Abstract
Surface plasmon resonance (SPR) immunosensor using 4-mercaptobenzoic acid (4-MBA) modified gold (4-MBA/Au) SPR chip was developed first time for the detection of Brucella melitensis (B. melitensis) based on the screening of its complementary DNA target by using two different newly designed DNA probes of IS711 gene. Herein, interaction between DNA probes and target molecule are also investigated and result revealed that the interaction is spontaneous. The kinetics and thermodynamic results derived from the experimental data showed that the interaction between complementary DNA targets and probe 1 is more effective than that of probe 2. Equilibrium dissociation constant (KD) and maximum binding capacity of analyte (Bmax) values for the interaction of complementary DNA target with the immobilized DNA probes were calculated by using kinetic evaluation software, and found to be 15.3 pM (KD) and 81.02m° (Bmax) with probe 1 and 54.9pM and 55.29m° (Bmax), respectively. Moreover, real serum samples analysis were also carried out using immobilized probe 1 and probe 2 with SPR which showed the applicability of this methodology and provides an alternative way for the detection of B. melitensis in less than 10min. This remarkable sensing response of present methodology offer a real time and label free detection of biological warfare agent and provide an opportunity to make miniaturized sensor, indicating considerable promise for diverse environmental, bio-defence, clinical diagnostics, food safety, water and security applications.
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Affiliation(s)
- Bhavna Sikarwar
- Defence Research and Development Establishment, DRDO, Jhansi Road, Gwalior 474002, India
| | - Virendra V Singh
- Defence Research and Development Establishment, DRDO, Jhansi Road, Gwalior 474002, India
| | - Pushpendra K Sharma
- Defence Research and Development Establishment, DRDO, Jhansi Road, Gwalior 474002, India
| | - Ashu Kumar
- Defence Research and Development Establishment, DRDO, Jhansi Road, Gwalior 474002, India
| | | | - Mannan Boopathi
- Defence Research and Development Establishment, DRDO, Jhansi Road, Gwalior 474002, India.
| | - Beer Singh
- Defence Research and Development Establishment, DRDO, Jhansi Road, Gwalior 474002, India
| | - Yogesh K Jaiswal
- School of Studies in Biochemistry, Jiwaji University, Gwalior 474011, India
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