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Hwu Y, Margaritondo G, Chiang AS. Q&A: Why use synchrotron x-ray tomography for multi-scale connectome mapping? BMC Biol 2017; 15:122. [PMID: 29268736 PMCID: PMC5738898 DOI: 10.1186/s12915-017-0461-8] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
To understand how information flows and is used in the human brain, we must map neural structures at all levels, providing visualizations similar to those of Google Earth for continents, countries, cities, and streets. Unfortunately, the imaging and processing techniques currently used in connectomics projects cannot achieve complete mapping for the brains of large animals within the timespan of a typical research career. However, feasible improvements in x-ray imaging would change this situation. This Q&A discusses synchrotron x-ray tomography, an exciting new approach for in situ mapping of whole-brain wiring diagrams at multiple levels of spatial resolution.
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Affiliation(s)
- Yeukuang Hwu
- Institute of Physics, Academia Sinica, Nankang, Taipei, 11529, Taiwan.
| | | | - Ann-Shyn Chiang
- Institute of Physics, Academia Sinica, Nankang, Taipei, 11529, Taiwan. .,Brain Research Center, National Tsing Hua University, Hsinchu, 30013, Taiwan.
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Lin YC, Hwu Y, Huang GS, Hsiao M, Lee TT, Yang SM, Lee TK, Chen NY, Yang SS, Chen A, Ka SM. Differential synchrotron X-ray imaging markers based on the renal microvasculature for tubulointerstitial lesions and glomerulopathy. Sci Rep 2017; 7:3488. [PMID: 28615647 PMCID: PMC5471266 DOI: 10.1038/s41598-017-03677-x] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2016] [Accepted: 05/03/2017] [Indexed: 12/13/2022] Open
Abstract
High resolution synchrotron microtomography capable of revealing microvessels in three dimensional (3D) establishes distinct imaging markers of mouse kidney disease strongly associated to renal tubulointerstitial (TI) lesions and glomerulopathy. Two complementary mouse models of chronic kidney disease (CKD), unilateral ureteral obstruction (UUO) and focal segmental glomerulosclerosis (FSGS), were used and five candidates of unique 3D imaging markers were identified. Our characterization to differentially reflect the altered microvasculature of renal TI lesions and/or glomerulopathy demonstrated these image features can be used to differentiate the disease status and the possible cause therefore qualified as image markers. These 3D imaging markers were further correlated with the histopathology and renal microvessel-based molecular study using antibodies against vascular endothelial cells (CD31), the connective tissue growth factor or the vascular endothelial growth factor. We also found that these 3D imaging markers individually characterize the development of renal TI lesions or glomerulopathy, quantitative and integrated use of all of them provide more information for differentiating the two renal conditions. Our findings thus establish a practical strategy to characterize the CKD-associated renal injuries by the microangiography-based 3D imaging and highlight the impact of dysfunctional microvasculature as a whole on the pathogenesis of the renal lesions.
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Affiliation(s)
- Yu-Chuan Lin
- Graduate Institute of Life Sciences, National Defense Medical Center, Taipei, Taiwan
| | - Yeukuang Hwu
- Institute of Physics, Academia Sinica, Taipei, Taiwan
| | - Guo-Shu Huang
- Department of Radiology, Tri-Service General Hospital, National Defense Medical Center, Taipei, Taiwan
| | - Michael Hsiao
- Genomics Research Center, Academia Sinica, Taipei, Taiwan
| | - Tsung-Tse Lee
- Institute of Physics, Academia Sinica, Taipei, Taiwan
| | - Shun-Min Yang
- Institute of Physics, Academia Sinica, Taipei, Taiwan
| | - Ting-Kuo Lee
- Institute of Physics, Academia Sinica, Taipei, Taiwan
| | - Nan-Yow Chen
- National Center for High-Performance Computing, Hsinchu, Taiwan
| | - Sung-Sen Yang
- Division of Nephrology, Department of Internal Medicine, Tri-Service General Hospital, National Defense Medical Center, Taipei, Taiwan
| | - Ann Chen
- Graduate Institute of Life Sciences, National Defense Medical Center, Taipei, Taiwan.
- Department of Pathology, Tri-Service General Hospital, National Defense Medical Center, Taipei, Taiwan.
| | - Shuk-Man Ka
- Graduate Institute of Life Sciences, National Defense Medical Center, Taipei, Taiwan.
- Graduate Institute of Aerospace and Undersea Medicine, Academy of Medicine, National Defense Medical Center, Taipei, Taiwan.
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Tu SJ, Wang SP, Cheng FC, Weng CE, Huang WT, Chang WJ, Chen YJ. Attenuating trabecular morphology associated with low magnesium diet evaluated using micro computed tomography. PLoS One 2017; 12:e0174806. [PMID: 28369124 PMCID: PMC5378393 DOI: 10.1371/journal.pone.0174806] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2016] [Accepted: 03/15/2017] [Indexed: 11/18/2022] Open
Abstract
OBJECTIVE The literature shows that bone mineral density (BMD) and the geometric architecture of trabecular bone in the femur may be affected by inadequate dietary intake of Mg. In this study, we used microcomputed tomography (micro-CT) to characterize and quantify the impact of a low-Mg diet on femoral trabecular bones in mice. MATERIALS AND METHODS Four-week-old C57BL/6J male mice were randomly assigned to 2 groups and supplied either a normal or low-Mg diet for 8weeks. Samples of plasma and urine were collected for biochemical analysis, and femur tissues were removed for micro-CT imaging. In addition to considering standard parameters, we regarded trabecular bone as a cylindrical rod and used computational algorithms for a technical assessment of the morphological characteristics of the bones. BMD (mg-HA/cm3) was obtained using a standard phantom. RESULTS We observed a decline in the total tissue volume, bone volume, percent bone volume, fractal dimension, number of trabecular segments, number of connecting nodes, bone mineral content (mg-HA), and BMD, as well as an increase in the structural model index and surface-area-to-volume ratio in low-Mg mice. Subsequently, we examined the distributions of the trabecular segment length and radius, and a series of specific local maximums were identified. The biochemical analysis revealed a 43% (96%) decrease in Mg and a 40% (71%) decrease in Ca in plasma (urine excretion). CONCLUSIONS This technical assessment performed using micro-CT revealed a lower population of femoral trabecular bones and a decrease in BMD at the distal metaphysis in the low-Mg mice. Examining the distributions of the length and radius of trabecular segments showed that the average length and radius of the trabecular segments in low-Mg mice are similar to those in normal mice.
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Affiliation(s)
- Shu-Ju Tu
- Department of Medical Imaging and Radiological Sciences, College of Medicine, Chang Gung University, Tao-Yuan, Taiwan
- Department of Medical Imaging and Intervention, Linkuo Chang Gung Memorial Hospital, Tao-Yuan, Taiwan
| | - Shun-Ping Wang
- Department of Orthopedics, Taichung Veterans General Hospital, Taichung, Taiwan
- Department of Life Science, Tunghai University, Taichung, Taiwan
| | - Fu-Chou Cheng
- Stem Cell Center, Department of Medical Research, Taichung Veterans General Hospital, Taichung, Taiwan
| | - Chia-En Weng
- Department of Medical Imaging and Radiological Sciences, College of Medicine, Chang Gung University, Tao-Yuan, Taiwan
| | - Wei-Tzu Huang
- Department of Medical Imaging and Radiological Sciences, College of Medicine, Chang Gung University, Tao-Yuan, Taiwan
| | - Wei-Jeng Chang
- National Laboratory Animal Center, National Applied Research Laboratories, Taipei, Taiwan
| | - Ying-Ju Chen
- Department of Food and Nutrition, Providence University, Taichung, Taiwan
- * E-mail:
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Lai SF, Ko BH, Chien CC, Chang CJ, Yang SM, Chen HH, Petibois C, Hueng DY, Ka SM, Chen A, Margaritondo G, Hwu Y. Gold nanoparticles as multimodality imaging agents for brain gliomas. J Nanobiotechnology 2015; 13:85. [PMID: 26589283 PMCID: PMC4654925 DOI: 10.1186/s12951-015-0140-2] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2015] [Accepted: 10/22/2015] [Indexed: 11/20/2022] Open
Abstract
Background Nanoparticles can be used for targeted drug delivery, in particular for brain cancer therapy. However, this requires a detailed analysis of nanoparticles from the associated microvasculature to the tumor, not easy because of the required high spatial resolution. The objective of this study is to demonstrate an experimental solution of this problem, based in vivo and post-mortem whole organ imaging plus nanoscale 3-dimensional (3D) X-ray microscopy. Results The use of gold nanoparticles (AuNPs) as contrast agents paved the way to a detailed high-resolution three dimensional (3D) X-ray and fluorescence imaging analysis of the relation between xenografted glioma cells and the tumor-induced angiogenic microvasculature. The images of the angiogenic microvessels revealed nanoparticle leakage. Complementary tests showed that after endocytotic internalization fluorescent AuNPs allow the visible-light detection of cells. Conclusions AuNP-loading of cells could be extended from the case presented here to other imaging techniques. In our study, they enabled us to (1) identify primary glioma cells at inoculation sites in mice brains; (2) follow the subsequent development of gliomas. (3) Detect the full details of the tumor-related microvasculature; (4) Finding leakage of AuNPs from the tumor-related vasculature, in contrast to no leakage from normal vasculature. Electronic supplementary material The online version of this article (doi:10.1186/s12951-015-0140-2) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Sheng-Feng Lai
- Department of Engineering Science, National Cheng Kung University, Tainan, 701, Taiwan.
| | - Bai-Hung Ko
- Department of Engineering Science, National Cheng Kung University, Tainan, 701, Taiwan. .,Institute of Physics, Academia Sinica, Nankang, Taipei, 115, Taiwan.
| | - Chia-Chi Chien
- Institute of Physics, Academia Sinica, Nankang, Taipei, 115, Taiwan.
| | - Chia-Ju Chang
- Institute of Physics, Academia Sinica, Nankang, Taipei, 115, Taiwan.
| | - Shun-Ming Yang
- Institute of Physics, Academia Sinica, Nankang, Taipei, 115, Taiwan.
| | - Hsiang-Hsin Chen
- Inserm U1029 LMMA, University of Bordeaux, 33600, Pessac Cedex, France.
| | - Cyril Petibois
- Inserm U1029 LMMA, University of Bordeaux, 33600, Pessac Cedex, France.
| | - Dueng-Yuan Hueng
- Department of Biochemistry, School of Medicine, National Defense Medical Center, Taipei, 114, Taiwan. .,Department of Neurological Surgery, Tri-Service General Hospital, National Defense Medical Center, Taipei, 114, Taiwan.
| | - Shuk-Man Ka
- Institute of Aerospace and Undersea Medicine, School of Medicine, National Defense Medical Center, Taipei, 114, Taiwan.
| | - Ann Chen
- Department of Pathology, Tri-Service General Hospital, National Defense Medical Center, Taipei, 114, Taiwan.
| | - G Margaritondo
- School of Basic Sciences, Ecole Polytechnique Fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland.
| | - Y Hwu
- Department of Engineering Science, National Cheng Kung University, Tainan, 701, Taiwan. .,Institute of Physics, Academia Sinica, Nankang, Taipei, 115, Taiwan. .,Advanced Optoelectronic Technology Center, National Cheng Kung University, Tainan, 701, Taiwan.
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AlMalki WH, Shahid I, Mehdi AY, Hafeez MH. Assessment methods for angiogenesis and current approaches for its quantification. Indian J Pharmacol 2014; 46:251-6. [PMID: 24987169 PMCID: PMC4071699 DOI: 10.4103/0253-7613.132152] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/25/2013] [Revised: 03/18/2014] [Accepted: 03/24/2014] [Indexed: 12/28/2022] Open
Abstract
Angiogenesis is a physiological process which describes the development of new blood vessels from the existing vessels. It is a common and the most important process in the formation and development of blood vessels, so it is supportive in the healing of wounds and granulation of tissues. The different assays for the evaluation of angiogenesis have been described with distinct advantages and some limitations. In order to develop angiogenic and antiangiogenic techniques, continuous efforts have been resulted to give animal models for more quantitative analysis of angiogenesis. Most of the studies on angiogenic inducers and inhibitors rely on various models, both in vitro, in vivo and in ova, as indicators of efficacy. The angiogenesis assays are very much helpful to test efficacy of both pro- and anti- angiogenic agents. The development of non-invasive procedures for quantification of angiogenesis will facilitate this process significantly. The main objective of this review article is to focus on the novel and existing methods of angiogenesis and their quantification techniques. These findings will be helpful to establish the most convenient methods for the detection, quantification of angiogenesis and to develop a novel, well tolerated and cost effective anti-angiogenic treatment in the near future.
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Affiliation(s)
- Waleed Hassan AlMalki
- Departments of Pharmacology and Toxicology, College of Pharmacy, Umm Al Qura University, Makkah, The Kingdom of Saudi Arabia
| | - Imran Shahid
- Departments of Pharmacology and Toxicology, College of Pharmacy, Umm Al Qura University, Makkah, The Kingdom of Saudi Arabia
| | - Abeer Yousaf Mehdi
- Departments of Pharmacology and Toxicology, College of Pharmacy, Umm Al Qura University, Makkah, The Kingdom of Saudi Arabia
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Chien CC, Chen HH, Lai SF, Hwu Y, Petibois C, Yang CS, Chu Y, Margaritondo G. X-ray imaging of tumor growth in live mice by detecting gold-nanoparticle-loaded cells. Sci Rep 2012; 2:610. [PMID: 22934133 PMCID: PMC3429882 DOI: 10.1038/srep00610] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2012] [Accepted: 05/10/2012] [Indexed: 11/17/2022] Open
Abstract
We show that sufficient concentrations of gold nanoparticles produced by an original synthesis method in EMT-6 and CT-26 cancer cells make it possible to detect the presence, necrosis and proliferation of such cells after inoculation in live mice. We first demonstrated that the nanoparticles do not interfere with the proliferation process. Then, we observed significant differences in the tumor evolution and the angiogenesis process after shallow and deep inoculation. A direct comparison with pathology optical images illustrates the effectiveness of this approach.
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Affiliation(s)
- Chia-Chi Chien
- Institute of Physics, Academia Sinica, Nankang, Taipei 115, Taiwan
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X-ray microscopy and tomography detect the accumulation of bare and PEG-coated gold nanoparticles in normal and tumor mouse tissues. Anal Bioanal Chem 2012; 404:1287-96. [PMID: 22918568 DOI: 10.1007/s00216-012-6217-y] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2012] [Revised: 05/23/2012] [Accepted: 06/20/2012] [Indexed: 10/28/2022]
Abstract
We demonstrate that, with appropriate staining, high-resolution X-ray microscopy can image complicated tissue structures--cerebellum and liver--and resolve large or small amounts of Au nanoparticles in these tissues. Specifically, images of tumor tissue reveal high concentrations of accumulated Au nanoparticles. PEG (poly(ethylene glycol)) coating is quite effective in enhancing this accumulation and significantly modifies the mechanism of uptake by reticuloendothelial system (RES) organs.
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Kim E, Stamatelos S, Cebulla J, Bhujwalla ZM, Popel AS, Pathak AP. Multiscale imaging and computational modeling of blood flow in the tumor vasculature. Ann Biomed Eng 2012; 40:2425-41. [PMID: 22565817 DOI: 10.1007/s10439-012-0585-5] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2012] [Accepted: 04/27/2012] [Indexed: 12/30/2022]
Abstract
The evolution in our understanding of tumor angiogenesis has been the result of pioneering imaging and computational modeling studies spanning the endothelial cell, microvasculature and tissue levels. Many of these primary data on the tumor vasculature are in the form of images from pre-clinical tumor models that provide a wealth of qualitative and quantitative information in many dimensions and across different spatial scales. However, until recently, the visualization of changes in the tumor vasculature across spatial scales remained a challenge due to a lack of techniques for integrating micro- and macroscopic imaging data. Furthermore, the paucity of three-dimensional (3-D) tumor vascular data in conjunction with the challenges in obtaining such data from patients presents a serious hurdle for the development and validation of predictive, multiscale computational models of tumor angiogenesis. In this review, we discuss the development of multiscale models of tumor angiogenesis, new imaging techniques capable of reproducing the 3-D tumor vascular architecture with high fidelity, and the emergence of "image-based models" of tumor blood flow and molecular transport. Collectively, these developments are helping us gain a fundamental understanding of the cellular and molecular regulation of tumor angiogenesis that will benefit the development of new cancer therapies. Eventually, we expect this exciting integration of multiscale imaging and mathematical modeling to have widespread application beyond the tumor vasculature to other diseases involving a pathological vasculature, such as stroke and spinal cord injury.
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Affiliation(s)
- Eugene Kim
- Department of Biomedical Engineering, The Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA
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Lai SF, Chien CC, Chen WC, Chen YY, Wang CH, Hwu Y, Yang CS, Margaritondo G. Size control of gold nanoparticles by intense X-ray irradiation: the relevant parameters and imaging applications. RSC Adv 2012. [DOI: 10.1039/c2ra20260c] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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