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Fateev IV, Sasmakov SA, Abdurakhmanov JM, Ziyaev AA, Khasanov SS, Eshboev FB, Ashirov ON, Frolova VD, Eletskaya BZ, Smirnova OS, Berzina MY, Arnautova AO, Abramchik YA, Kostromina MA, Kayushin AL, Antonov KV, Paramonov AS, Andronova VL, Galegov GA, Esipov RS, Azimova SS, Miroshnikov AI, Konstantinova ID. Synthesis of Substituted 1,2,4-Triazole-3-Thione Nucleosides Using E. coli Purine Nucleoside Phosphorylase. Biomolecules 2024; 14:745. [PMID: 39062460 PMCID: PMC11274511 DOI: 10.3390/biom14070745] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2024] [Revised: 06/18/2024] [Accepted: 06/19/2024] [Indexed: 07/28/2024] Open
Abstract
1,2,4-Triazole derivatives have a wide range of biological activities. The most well-known drug that contains 1,2,4-triazole as part of its structure is the nucleoside analogue ribavirin, an antiviral drug. Finding new nucleosides based on 1,2,4-triazole is a topical task. The aim of this study was to synthesize ribosides and deoxyribosides of 1,2,4-triazole-3-thione derivatives and test their antiviral activity against herpes simplex viruses. Three compounds from a series of synthesized mono- and disubstituted 1,2,4-triazole-3-thione derivatives were found to be substrates for E. coli purine nucleoside phosphorylase. Of six prepared nucleosides, the riboside and deoxyriboside of 3-phenacylthio-1,2,4-triazole were obtained at good yields. The yields of the disubstituted 1,2,4-triazol-3-thiones were low due to the effect of bulky substituents at the C3 and C5 positions on the selectivity of enzymatic glycosylation for one particular nitrogen atom in the triazole ring. The results of cytotoxic and antiviral studies on acyclovir-sensitive wild-type strain HSV-1/L2(TK+) and acyclovir-resistant strain (HSV-1/L2/RACV) in Vero E6 cell culture showed that the incorporation of a thiobutyl substituent into the C5 position of 3-phenyl-1,2,4-triazole results in a significant increase in the cytotoxicity of the base and antiviral activity. The highest antiviral activity was observed in the 3-phenacylthio-1-(β-D-ribofuranosyl)-1,2,4-triazole and 5-butylthio-1-(2-deoxy-β-D-ribofuranosyl)-3-phenyl-1,2,4-triazole nucleosides, with their selectivity indexes being significantly higher than that of ribavirin. It was also found that with the increasing lipophilicity of the nucleosides, the activity and toxicity of the tested compounds increased.
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Affiliation(s)
- Ilya V. Fateev
- Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya St. 16/10, 117997 Moscow, Russia; (V.D.F.); (B.Z.E.); (O.S.S.); (M.Y.B.); (A.O.A.); (Y.A.A.); (M.A.K.); (A.L.K.); (K.V.A.); (A.S.P.); (R.S.E.); (A.I.M.); (I.D.K.)
| | - Sobirdjan A. Sasmakov
- Acad. S.Yu. Yunusov Institute of the Chemistry of Plant Substances, Academy of Sciences of the Republic of Uzbekistan, Mirzo Ulugbek Str. 77, 100170 Tashkent, Uzbekistan; (J.M.A.); (A.A.Z.); (Sh.Sh.K.); (F.B.E.); (O.N.A.); (S.S.A.)
| | - Jaloliddin M. Abdurakhmanov
- Acad. S.Yu. Yunusov Institute of the Chemistry of Plant Substances, Academy of Sciences of the Republic of Uzbekistan, Mirzo Ulugbek Str. 77, 100170 Tashkent, Uzbekistan; (J.M.A.); (A.A.Z.); (Sh.Sh.K.); (F.B.E.); (O.N.A.); (S.S.A.)
| | - Abdukhakim A. Ziyaev
- Acad. S.Yu. Yunusov Institute of the Chemistry of Plant Substances, Academy of Sciences of the Republic of Uzbekistan, Mirzo Ulugbek Str. 77, 100170 Tashkent, Uzbekistan; (J.M.A.); (A.A.Z.); (Sh.Sh.K.); (F.B.E.); (O.N.A.); (S.S.A.)
| | - Shukhrat Sh. Khasanov
- Acad. S.Yu. Yunusov Institute of the Chemistry of Plant Substances, Academy of Sciences of the Republic of Uzbekistan, Mirzo Ulugbek Str. 77, 100170 Tashkent, Uzbekistan; (J.M.A.); (A.A.Z.); (Sh.Sh.K.); (F.B.E.); (O.N.A.); (S.S.A.)
| | - Farkhod B. Eshboev
- Acad. S.Yu. Yunusov Institute of the Chemistry of Plant Substances, Academy of Sciences of the Republic of Uzbekistan, Mirzo Ulugbek Str. 77, 100170 Tashkent, Uzbekistan; (J.M.A.); (A.A.Z.); (Sh.Sh.K.); (F.B.E.); (O.N.A.); (S.S.A.)
| | - Oybek N. Ashirov
- Acad. S.Yu. Yunusov Institute of the Chemistry of Plant Substances, Academy of Sciences of the Republic of Uzbekistan, Mirzo Ulugbek Str. 77, 100170 Tashkent, Uzbekistan; (J.M.A.); (A.A.Z.); (Sh.Sh.K.); (F.B.E.); (O.N.A.); (S.S.A.)
| | - Valeriya D. Frolova
- Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya St. 16/10, 117997 Moscow, Russia; (V.D.F.); (B.Z.E.); (O.S.S.); (M.Y.B.); (A.O.A.); (Y.A.A.); (M.A.K.); (A.L.K.); (K.V.A.); (A.S.P.); (R.S.E.); (A.I.M.); (I.D.K.)
| | - Barbara Z. Eletskaya
- Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya St. 16/10, 117997 Moscow, Russia; (V.D.F.); (B.Z.E.); (O.S.S.); (M.Y.B.); (A.O.A.); (Y.A.A.); (M.A.K.); (A.L.K.); (K.V.A.); (A.S.P.); (R.S.E.); (A.I.M.); (I.D.K.)
| | - Olga S. Smirnova
- Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya St. 16/10, 117997 Moscow, Russia; (V.D.F.); (B.Z.E.); (O.S.S.); (M.Y.B.); (A.O.A.); (Y.A.A.); (M.A.K.); (A.L.K.); (K.V.A.); (A.S.P.); (R.S.E.); (A.I.M.); (I.D.K.)
| | - Maria Ya. Berzina
- Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya St. 16/10, 117997 Moscow, Russia; (V.D.F.); (B.Z.E.); (O.S.S.); (M.Y.B.); (A.O.A.); (Y.A.A.); (M.A.K.); (A.L.K.); (K.V.A.); (A.S.P.); (R.S.E.); (A.I.M.); (I.D.K.)
| | - Alexandra O. Arnautova
- Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya St. 16/10, 117997 Moscow, Russia; (V.D.F.); (B.Z.E.); (O.S.S.); (M.Y.B.); (A.O.A.); (Y.A.A.); (M.A.K.); (A.L.K.); (K.V.A.); (A.S.P.); (R.S.E.); (A.I.M.); (I.D.K.)
| | - Yulia A. Abramchik
- Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya St. 16/10, 117997 Moscow, Russia; (V.D.F.); (B.Z.E.); (O.S.S.); (M.Y.B.); (A.O.A.); (Y.A.A.); (M.A.K.); (A.L.K.); (K.V.A.); (A.S.P.); (R.S.E.); (A.I.M.); (I.D.K.)
| | - Maria A. Kostromina
- Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya St. 16/10, 117997 Moscow, Russia; (V.D.F.); (B.Z.E.); (O.S.S.); (M.Y.B.); (A.O.A.); (Y.A.A.); (M.A.K.); (A.L.K.); (K.V.A.); (A.S.P.); (R.S.E.); (A.I.M.); (I.D.K.)
| | - Alexey L. Kayushin
- Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya St. 16/10, 117997 Moscow, Russia; (V.D.F.); (B.Z.E.); (O.S.S.); (M.Y.B.); (A.O.A.); (Y.A.A.); (M.A.K.); (A.L.K.); (K.V.A.); (A.S.P.); (R.S.E.); (A.I.M.); (I.D.K.)
| | - Konstantin V. Antonov
- Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya St. 16/10, 117997 Moscow, Russia; (V.D.F.); (B.Z.E.); (O.S.S.); (M.Y.B.); (A.O.A.); (Y.A.A.); (M.A.K.); (A.L.K.); (K.V.A.); (A.S.P.); (R.S.E.); (A.I.M.); (I.D.K.)
| | - Alexander S. Paramonov
- Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya St. 16/10, 117997 Moscow, Russia; (V.D.F.); (B.Z.E.); (O.S.S.); (M.Y.B.); (A.O.A.); (Y.A.A.); (M.A.K.); (A.L.K.); (K.V.A.); (A.S.P.); (R.S.E.); (A.I.M.); (I.D.K.)
| | - Valeria L. Andronova
- D. I. Ivanovsky Institute of Virology (N. F. Gamaleya Research Center of Epidemiology and Microbiology, Ministry of Healthcare of the Russian Federation), Gamaleya St. 18, 123098 Moscow, Russia; (V.L.A.); (G.A.G.)
| | - Georgiy A. Galegov
- D. I. Ivanovsky Institute of Virology (N. F. Gamaleya Research Center of Epidemiology and Microbiology, Ministry of Healthcare of the Russian Federation), Gamaleya St. 18, 123098 Moscow, Russia; (V.L.A.); (G.A.G.)
| | - Roman S. Esipov
- Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya St. 16/10, 117997 Moscow, Russia; (V.D.F.); (B.Z.E.); (O.S.S.); (M.Y.B.); (A.O.A.); (Y.A.A.); (M.A.K.); (A.L.K.); (K.V.A.); (A.S.P.); (R.S.E.); (A.I.M.); (I.D.K.)
| | - Shakhnoz S. Azimova
- Acad. S.Yu. Yunusov Institute of the Chemistry of Plant Substances, Academy of Sciences of the Republic of Uzbekistan, Mirzo Ulugbek Str. 77, 100170 Tashkent, Uzbekistan; (J.M.A.); (A.A.Z.); (Sh.Sh.K.); (F.B.E.); (O.N.A.); (S.S.A.)
| | - Anatoly I. Miroshnikov
- Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya St. 16/10, 117997 Moscow, Russia; (V.D.F.); (B.Z.E.); (O.S.S.); (M.Y.B.); (A.O.A.); (Y.A.A.); (M.A.K.); (A.L.K.); (K.V.A.); (A.S.P.); (R.S.E.); (A.I.M.); (I.D.K.)
| | - Irina D. Konstantinova
- Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya St. 16/10, 117997 Moscow, Russia; (V.D.F.); (B.Z.E.); (O.S.S.); (M.Y.B.); (A.O.A.); (Y.A.A.); (M.A.K.); (A.L.K.); (K.V.A.); (A.S.P.); (R.S.E.); (A.I.M.); (I.D.K.)
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Wong XK, Ng CS, Yeong KY. Shaping the future of antiviral Treatment: Spotlight on Nucleobase-Containing drugs and their revolutionary impact. Bioorg Chem 2024; 144:107150. [PMID: 38309002 DOI: 10.1016/j.bioorg.2024.107150] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2023] [Revised: 12/28/2023] [Accepted: 01/22/2024] [Indexed: 02/05/2024]
Abstract
Nucleobases serve as essential molecular frameworks present in both natural and synthetic compounds that exhibit notable antiviral activity. Through molecular modifications, novel nucleobase-containing drugs (NCDs) have been developed, exhibiting enhanced antiviral activity against a wide range of viruses, including the recently emerged SARS‑CoV‑2. This article provides a detailed examination of the significant advancements in NCDs from 2015 till current, encompassing various aspects concerning their mechanisms of action, pharmacology and antiviral properties. Additionally, the article discusses antiviral prodrugs relevant to the scope of this review. It fills in the knowledge gap by examining the structure-activity relationship and trend of NCDs as therapeutics against a diverse range of viral diseases, either as approved drugs, clinical candidates or as early-stage development prospects. Moreover, the article highlights on the status of this field of study and addresses the prevailing limitations encountered.
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Affiliation(s)
- Xi Khai Wong
- School of Science, Monash University (Malaysia Campus), Jalan Lagoon Selatan, Bandar Sunway, 47500 Subang Jaya, Selangor, Malaysia
| | - Chen Seng Ng
- School of Science, Monash University (Malaysia Campus), Jalan Lagoon Selatan, Bandar Sunway, 47500 Subang Jaya, Selangor, Malaysia
| | - Keng Yoon Yeong
- School of Science, Monash University (Malaysia Campus), Jalan Lagoon Selatan, Bandar Sunway, 47500 Subang Jaya, Selangor, Malaysia.
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Matveev AV, Grebenkina LE, Prutkov AN, Chudinov MV. 5-Substituted 1,2,4-Triazole-3-Carboxylates and 5-Substituted Ribavirin Analogs Synthesis. Curr Protoc 2021; 1:e281. [PMID: 34748276 DOI: 10.1002/cpz1.281] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Ribavirin analogs substituted at position 5 of the heterocyclic base are interesting for their biological activity. This protocol describes a synthetic route to several such ribavirin analogs with a wide range of substituents.© 2021 Wiley Periodicals LLC. Basic Protocol 1: Synthesis and purification of 5-substituted ethyl 1,2,4-triazole-3-carboxylates - synthetic precursors of nucleobases Basic Protocol 2: Synthesis and purification of protected 1,2,4-triazole nucleoside analogs Basic Protocol 3: Synthesis and purification of 5-substituted ribavirin analogs.
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Affiliation(s)
- Andrey V Matveev
- Biotechnology & Industrial Pharmacy Department, Lomonosov Institute of Fine Chemical Technologies, MIREA-Russian Technological University, Moscow, Russia
| | - Lyubov E Grebenkina
- Biotechnology & Industrial Pharmacy Department, Lomonosov Institute of Fine Chemical Technologies, MIREA-Russian Technological University, Moscow, Russia
| | - Alexander N Prutkov
- Biotechnology & Industrial Pharmacy Department, Lomonosov Institute of Fine Chemical Technologies, MIREA-Russian Technological University, Moscow, Russia
| | - Mikhail V Chudinov
- Biotechnology & Industrial Pharmacy Department, Lomonosov Institute of Fine Chemical Technologies, MIREA-Russian Technological University, Moscow, Russia
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Prutkov AN, Chudinov MV, Matveev AV, Grebenkina LE, Akimov MG, Berezovskaya YV. 5-alkylvinyl-1,2,4-triazole nucleosides: Synthesis and biological evaluation. NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS 2020; 39:943-963. [PMID: 32126895 DOI: 10.1080/15257770.2020.1723624] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
Some 5-substituted ribavirin analogues have a high antiviral and anticancer activity, but their mechanisms of action are obviously not the same as their parent compound. The SAR studies performed on 3 (5)-substituted 1,2,4-triazole nucleosides have shown a high dependency between the structure of the 3 (5)-substituent and the level of antiviral/anticancer activity. The most active substances of the row contain coplanar with the 1,2,4-triazole ring aromatic substituent which is connected by a rigid ethynyl bond. However, the compounds with the trans-vinyl linker also had antiviral activity. We decided to study the antitumor activity of ribavirin analogues with alkyl/aryl vinyl substituents in the 5th position of the 1,2,4-triazole ring. Protected nucleoside analogues with various 5-alkylvinyl substituents were obtained by Horner-Wadsworth-Emmons reaction from the common precursor and converted to the nucleosides. Arylvinyl nucleosides were synthesised according the reported procedures. All compounds did not show significant antiproliferative activity on several tumour cell lines. Coplanar aromatic motif in the 5-substituent for the anticancer activity manifestation was confirmed.
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Affiliation(s)
- Alexander N Prutkov
- Biotechnology & Industrial Pharmacy Department, Lomonosov Institute of Fine Chemical Tehnologies, MIREA - Russian Technological University, Moscow, Russia
| | - Mikhail V Chudinov
- Biotechnology & Industrial Pharmacy Department, Lomonosov Institute of Fine Chemical Tehnologies, MIREA - Russian Technological University, Moscow, Russia
| | - Andrey V Matveev
- Biotechnology & Industrial Pharmacy Department, Lomonosov Institute of Fine Chemical Tehnologies, MIREA - Russian Technological University, Moscow, Russia
| | - Lyubov E Grebenkina
- Biotechnology & Industrial Pharmacy Department, Lomonosov Institute of Fine Chemical Tehnologies, MIREA - Russian Technological University, Moscow, Russia
| | - Mikhail G Akimov
- Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow, Russia
| | - Yulia V Berezovskaya
- Moscow Institute of Physics and Technology (State University), Dolgoprudny, Moscow Region, Russia
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Prutkov AN, Chudinov MV, Matveev AV, Grebenkina LE, Berezovskaya YV. Chemical ribosylation of 5-substituted 1,2,4-triazole-3-carboxylates. NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS 2019; 38:550-566. [PMID: 30856058 DOI: 10.1080/15257770.2019.1576881] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Abstract
The chemical ribosylation pathways of 5-substituted-1,2,4-triazole-3-carboxylates are discussed. For the products of the chemical synthesis of the 3(5)-alkyl- or 3(5)-aryl-substituted ribavirin analogues the anomer configuration and isomer composition were determined.
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Affiliation(s)
| | - Mikhail V Chudinov
- b Lomonosov Institute of Fine Chemical Technologies , Moscow Technological University , Moscow , Russia
| | - Andrey V Matveev
- b Lomonosov Institute of Fine Chemical Technologies , Moscow Technological University , Moscow , Russia
| | | | - Yulia V Berezovskaya
- c Moscow Institute of Physics and Technology (State University) , Dolgoprudny , Russia
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