1
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Heterogeneity and deformation behavior of lipid vesicles. Curr Opin Colloid Interface Sci 2022. [DOI: 10.1016/j.cocis.2022.101646] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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2
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Arribas Perez M, Beales PA. Protein corona alters the mechanisms of interaction between silica nanoparticles and lipid vesicles. SOFT MATTER 2022; 18:5021-5026. [PMID: 35730742 DOI: 10.1039/d2sm00739h] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
The use of nanoparticles (NPs) for biomedical applications implies their delivery into the organism where they encounter biological fluids. In such biological fluids, proteins and other biomolecules adhere to the surface of the NPs forming a biomolecular corona that can alter significantly the behaviour of the nanomaterials. Here, we investigate the impact of a bovine serum albumin corona on interactions between silica nanoparticles (SNPs) of two different sizes and giant lipid vesicles. The formation of the protein corona leads to a significant increase of the hydrodynamic size of the SNPs. Confocal microscopy imaging shows that the protein corona alters the morphological response of vesicles to SNPs. In addition, Laurdan spectral imaging show that the protein corona weakens the effect of SNPs on the lipid packing in the GUV membrane. Our results demonstrate that a protein corona can change the interaction mechanism between nanoparticles and lipid membranes.
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Affiliation(s)
- Marcos Arribas Perez
- Astbury Centre for Structural Molecular Biology and School of Chemistry, University of Leeds, Leeds, LS2 9JT, UK.
| | - Paul A Beales
- Astbury Centre for Structural Molecular Biology and School of Chemistry, University of Leeds, Leeds, LS2 9JT, UK.
- Bragg Centre for Materials Research, University of Leeds, Leeds, LS2 9JT, UK
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3
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Imai M, Sakuma Y, Kurisu M, Walde P. From vesicles toward protocells and minimal cells. SOFT MATTER 2022; 18:4823-4849. [PMID: 35722879 DOI: 10.1039/d1sm01695d] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
In contrast to ordinary condensed matter systems, "living systems" are unique. They are based on molecular compartments that reproduce themselves through (i) an uptake of ingredients and energy from the environment, and (ii) spatially and timely coordinated internal chemical transformations. These occur on the basis of instructions encoded in information molecules (DNAs). Life originated on Earth about 4 billion years ago as self-organised systems of inorganic compounds and organic molecules including macromolecules (e.g. nucleic acids and proteins) and low molar mass amphiphiles (lipids). Before the first living systems emerged from non-living forms of matter, functional molecules and dynamic molecular assemblies must have been formed as prebiotic soft matter systems. These hypothetical cell-like compartment systems often are called "protocells". Other systems that are considered as bridging units between non-living and living systems are called "minimal cells". They are synthetic, autonomous and sustainable reproducing compartment systems, but their constituents are not limited to prebiotic substances. In this review, we focus on both membrane-bounded (vesicular) protocells and minimal cells, and provide a membrane physics background which helps to understand how morphological transformations of vesicle systems might have happened and how vesicle reproduction might be coupled with metabolic reactions and information molecules. This research, which bridges matter and life, is a great challenge in which soft matter physics, systems chemistry, and synthetic biology must take joined efforts to better understand how the transformation of protocells into living systems might have occurred at the origin of life.
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Affiliation(s)
- Masayuki Imai
- Department of Physics, Graduate School of Science, Tohoku University, 6-3 Aoba, Aramaki, Aoba, Sendai 980-8578, Japan.
| | - Yuka Sakuma
- Department of Physics, Graduate School of Science, Tohoku University, 6-3 Aoba, Aramaki, Aoba, Sendai 980-8578, Japan.
| | - Minoru Kurisu
- Department of Physics, Graduate School of Science, Tohoku University, 6-3 Aoba, Aramaki, Aoba, Sendai 980-8578, Japan.
| | - Peter Walde
- Department of Materials, ETH Zürich, Vladimir-Prelog-Weg 5, CH-8093 Zürich, Switzerland
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4
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Firsov AM, Franco MSF, Chistyakov DV, Goriainov SV, Sergeeva MG, Kotova EA, Fomich MA, Bekish AV, Sharko OL, Shmanai VV, Itri R, Baptista MS, Antonenko YN, Shchepinov MS. Deuterated polyunsaturated fatty acids inhibit photoirradiation-induced lipid peroxidation in lipid bilayers. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY. B, BIOLOGY 2022; 229:112425. [PMID: 35276579 DOI: 10.1016/j.jphotobiol.2022.112425] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2021] [Revised: 02/17/2022] [Accepted: 02/26/2022] [Indexed: 12/24/2022]
Abstract
Lipid peroxidation (LPO) plays a key role in many age-related neurodegenerative conditions and other disorders. Light irradiation can initiate LPO through various mechanisms and is of importance in retinal and dermatological pathologies. The introduction of deuterated polyunsaturated fatty acids (D-PUFA) into membrane lipids is a promising approach for protection against LPO. Here, we report the protective effects of D-PUFA against the photodynamically induced LPO, using illumination in the presence of the photosensitizer trisulfonated aluminum phthalocyanine (AlPcS3) in liposomes and giant unilamellar vesicles (GUV), as assessed in four experimental models: 1) sulforhodamine B leakage from liposomes, detected with fluorescence correlation spectroscopy (FCS); 2) formation of diene conjugates in liposomal membranes, measured by absorbance at 234 nm; 3) membrane leakage in GUV assessed by optical phase-contrast intensity observations; 4) UPLC-MS/MS method to detect oxidized linoleic acid (Lin)-derived metabolites. Specifically, in liposomes or GUV containing H-PUFA (dilinoleyl-sn-glycero-3-phosphatidylcholine), light irradiation led to an extensive oxidative damage to bilayers. By contrast, no damage was observed in lipid bilayers containing 20% or more D-PUFA (D2-Lin or D10-docosahexanenoic acid). Remarkably, addition of tocopherol increased the dye leakage from liposomes in H-PUFA bilayers compared to photoirradiation alone, signifying tocopherol's pro-oxidant properties. However, in the presence of D-PUFA the opposite effect was observed, whereby adding tocopherol increased the resistance to LPO. These findings suggest a method to augment the protective effects of D-PUFA, which are currently undergoing clinical trials in several neurological and retinal diseases that involve LPO.
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Affiliation(s)
- A M Firsov
- Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Russia
| | - M S F Franco
- Biochemistry Department, Institute of Chemistry, University of São Paulo (IQUSP), AV. Professor Lineu Prestes avenue, 748, USP, CEP: 05508-000 São Paulo, Brazil
| | - D V Chistyakov
- Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Russia
| | - S V Goriainov
- SREC PFUR Peoples' Friendship University of Russia, Moscow, Russia
| | - M G Sergeeva
- Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Russia
| | - E A Kotova
- Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Russia
| | - M A Fomich
- Institute of Physical Organic Chemistry, National Academy of Science, Minsk, Belarus
| | - A V Bekish
- Institute of Physical Organic Chemistry, National Academy of Science, Minsk, Belarus
| | - O L Sharko
- Institute of Physical Organic Chemistry, National Academy of Science, Minsk, Belarus
| | - V V Shmanai
- Institute of Physical Organic Chemistry, National Academy of Science, Minsk, Belarus
| | - R Itri
- Applied Physics Department, Institute of Physics, University of São Paulo, Rua do Matão, 1371 (217-B.Jafet), Butantã, USP, 05508-090 São Paulo, Brazil
| | - M S Baptista
- Biochemistry Department, Institute of Chemistry, University of São Paulo (IQUSP), AV. Professor Lineu Prestes avenue, 748, USP, CEP: 05508-000 São Paulo, Brazil.
| | - Y N Antonenko
- Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Russia
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5
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Richter SK, Menzel AM. Mediated interactions between rigid inclusions in two-dimensional elastic or fluid films. Phys Rev E 2022; 105:014609. [PMID: 35193206 DOI: 10.1103/physreve.105.014609] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2021] [Accepted: 01/05/2022] [Indexed: 06/14/2023]
Abstract
Interactions between rigid inclusions in continuous three-dimensional linearly elastic solids and low-Reynolds-number viscous fluids have largely been quantified in the past. Prime example systems are given by functionalized elastic composite materials or fluid colloidal suspensions. Here, we address the significantly less frequently studied situation of rigid inclusions in two-dimensional elastic or low-Reynolds-number fluid films. We concentrate on the situation in which disklike inclusions remain well separated from each other and do not get into contact. Specifically, we demonstrate and explain that the logarithmic divergence of the associated Green's function is removed in the absence of net external forces on the inclusions, in line with physical intuition. For instance, this situation applies when only pairwise mutual interactions between the inclusions prevail. Our results will support, for example, investigations on membranes functionalized by appropriate inclusions, both of technical or biological origin, or the dynamics of active microswimmers in appropriately prepared thin films.
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Affiliation(s)
- S K Richter
- Institut für Physik, Otto-von-Guericke-Universität Magdeburg, Universitätsplatz 2, 39106 Magdeburg, Germany
| | - A M Menzel
- Institut für Physik, Otto-von-Guericke-Universität Magdeburg, Universitätsplatz 2, 39106 Magdeburg, Germany
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6
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Sawada D, Asakura K, Banno T. Pathway-Dependent Phase Transitions of Supramolecular Self-assemblies Containing Cationic Amphiphiles with Azobenzene and Disulfide Groups. Chemistry 2021; 27:13840-13845. [PMID: 34398482 DOI: 10.1002/chem.202102143] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2021] [Indexed: 11/11/2022]
Abstract
There have been several attempts to construct supramolecular chemical systems that mimic the phase transitions in living systems. However, most of these phase transitions are one-to-one and induced by one stimulus or chemical; there have been few reports on the pathway-dependent phase transition of supramolecular self-assemblies in multi-step. To induce multistep phase transitions, molecular crystals were prepared that contained a cationic amphiphile bearing azobenzene and disulfide groups. A reducing agent caused the crystals to become vesicles, and adjacent, non-touching vesicles fused under UV and subsequent visible light. Adding a reducing agent to the worm-like aggregates that were generated after UV irradiation of the original crystals resulted in the growth of sheet-like aggregates. 1 H NMR and fluorescence anisotropy measurements showed that a series of phase transitions was induced by changes in the phase structures from molecular conversions of the reactive amphiphiles. The multiple pathway-dependent phase transitions of supramolecular self-assemblies can provide a methodology for developing new stimuli-responsive materials that exhibit the desirable properties under specific circumstances from a systems chemistry viewpoint.
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Affiliation(s)
- Daichi Sawada
- Department of Applied Chemistry, Faculty of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama, 223-8522, Japan
| | - Kouichi Asakura
- Department of Applied Chemistry, Faculty of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama, 223-8522, Japan
| | - Taisuke Banno
- Department of Applied Chemistry, Faculty of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama, 223-8522, Japan
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7
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Caliari A, Xu J, Yomo T. The requirement of cellularity for abiogenesis. Comput Struct Biotechnol J 2021; 19:2202-2212. [PMID: 33995913 PMCID: PMC8099592 DOI: 10.1016/j.csbj.2021.04.030] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2021] [Revised: 04/10/2021] [Accepted: 04/13/2021] [Indexed: 11/22/2022] Open
Abstract
The history of modern biochemistry started with the cellular theory of life. By putting aside the holistic protoplasmic theory, scientists of the XX century were able to advance the functional classification of cellular components significantly. The cell became the unit of the living. Current theories on the abiogenesis of life must account for a moment in evolution (chemical or biological) when this was not the case. Investigating the role of compartments and membranes along chemical and biotic evolution can lead a more generalised idea of living organisms that is fundamental to advance our efforts in astrobiology, origin of life and artificial life studies. Furthermore, it may provide insights in unexplained evolutionary features such as the lipid divide between Archaea and Eubacteria. By surveying our current understanding of the involvement of compartments in abiogenesis and evolution, the idea of cells as atomistic units of a general theory of biology will be discussed. The aim is not to undermine the validity of the cellular theory of life, but rather to elucidate possible biases with regards to cellularity and the origin of life. An open discussion in these regards could show the inherent limitations of non-cellular compartmentalization that may lead to the necessity of cellular structures to support complex life.
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Affiliation(s)
- Adriano Caliari
- School of Software Engineering, East China Normal University, Shanghai 200062, PR China
| | - Jian Xu
- Laboratory of Biology and Information Science, Biomedical Synthetic Biology Research Center, School of Life Sciences, East China Normal University, Shanghai 200062, PR China
| | - Tetsuya Yomo
- Laboratory of Biology and Information Science, Biomedical Synthetic Biology Research Center, School of Life Sciences, East China Normal University, Shanghai 200062, PR China
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8
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Malabed R, Hanashima S, Murata M, Sakurai K. Interactions of OSW-1 with Lipid Bilayers in Comparison with Digitonin and Soyasaponin. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2020; 36:3600-3610. [PMID: 32160747 DOI: 10.1021/acs.langmuir.9b03957] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
OSW-1, a unique steroidal saponin isolated from the bulbs of Ornithogalum saundersiae, has potent cell-growth inhibition activity. In this study, we conducted fluorescence measurements and microscopic observations using palmitoyloleoylphosphatidylcholine (POPC)-cholesterol (Chol) bilayers to evaluate the membrane-binding affinity of OSW-1 in comparison with another steroidal saponin, digitonin, and the triterpenoid saponin, soyasaponin Bb(I). The membrane activities of these saponins were evaluated using calcein leakage assays and fitted to the binding isotherm by changing the ratios of saponin-lipids. Digitonin showed the highest binding affinity for the POPC-Chol membrane (Kapp = 0.38 μM-1) and the strongest membrane disruptivity in the bound saponin-lipid ratio at the point of 50% calcein leakage (r50 = 0.47) occurrence. OSW-1 showed slightly lower activity (Kapp = 0.31 μM-1; r50 = 0.78), and the soyasaponin was the lowest in the membrane affinity and the calcein leakage activity (Kapp = 0.017 μM-1; r50 = 1.66). The effect of OSW-1 was further assessed using confocal microscopy in an experiment utilizing DiI and rhodamine 6G as the fluorescence probes. The addition of 30 μM OSW-1 induced inward membrane curvature in some giant unilamellar vesicles (GUVs). At the higher OSW-1 concentration (58 μM, r50 = 0.78) where the 50% calcein leakage was observed, the morphology of some GUVs became elongated. With digitonin at the corresponding concentration (35 μM, r50 = 0.47), membrane disruption and formation of large aggregates in aqueous solution were observed, probably due to a detergent-type mechanism. These saponins, including OSW-1, required Chol to exhibit their potent membrane activity although their mechanisms are thought to be different. At the effective concentration, OSW-1 preferably binds to the bilayers without prominent disruption of vesicles and exerts its activity through the formation of saponin-Chol complexes, probably resulting in membrane permeabilization.
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Affiliation(s)
- Raymond Malabed
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan
- ERATO, Lipid Active Structure Project, Japan Science and Technology Agency, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan
| | - Shinya Hanashima
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan
| | - Michio Murata
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan
- ERATO, Lipid Active Structure Project, Japan Science and Technology Agency, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan
| | - Kaori Sakurai
- Department of Biotechnology and Life Science, Tokyo University of Agriculture and Technology, Koganei-shi, Tokyo 184-8588, Japan
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9
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Surface Sensitive Analysis Device using Model Membrane and Challenges for Biosensor-chip. BIOCHIP JOURNAL 2020. [DOI: 10.1007/s13206-019-4110-x] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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10
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Tsubone TM, Baptista MS, Itri R. Understanding membrane remodelling initiated by photosensitized lipid oxidation. Biophys Chem 2019; 254:106263. [DOI: 10.1016/j.bpc.2019.106263] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2019] [Revised: 08/13/2019] [Accepted: 09/03/2019] [Indexed: 12/19/2022]
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11
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Ryu YS, Yun H, Chung T, Suh JH, Kim S, Lee K, Wittenberg NJ, Oh SH, Lee B, Lee SD. Kinetics of lipid raft formation at lipid monolayer-bilayer junction probed by surface plasmon resonance. Biosens Bioelectron 2019; 142:111568. [PMID: 31442945 DOI: 10.1016/j.bios.2019.111568] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2019] [Revised: 07/27/2019] [Accepted: 08/02/2019] [Indexed: 02/06/2023]
Abstract
A label-free, non-dispruptive, and real-time analytical device to monitor the dynamic features of biomolecules and their interactions with neighboring molecules is an essential prerequisite for biochip- and diagonostic assays. To explore one of the central questions on the lipid-lipid interactions in the course of the liquid-ordered (lo) domain formation, called rafts, we developed a method of reconstituting continuous but spatially heterogeneous lipid membrane platforms with molayer-bilayer juntions (MBJs) that enable to form the lo domains in a spatiotemporally controlled manner. This allows us to detect the time-lapse dynamics of the lipid-lipid interactions during raft formation and resultant membrane phase changes together with the raft-associated receptor-ligand binding through the surface plasmon resonance (SPR). For cross-validation, using epifluorescence microscopy, we demonstrated the underlying mechanisms for raft formations that the infiltration of cholesterols into the sphingolipid-enriched domains plays a crucial roles in the membrane phase-separation. Our membrane platform, being capable of monitoring dynamic interactions among lipids and performing the systematic optical analysis, will unveil physiological roles of cholesterols in a variety of biological events.
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Affiliation(s)
- Yong-Sang Ryu
- School of Electrical and Computer Engineering, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, South Korea; Sensor System Research Center, Korea Institute of Science and Technology, Seongbuk-gu, Seoul, 02792, South Korea
| | - Hansik Yun
- School of Electrical and Computer Engineering, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, South Korea
| | - Taerin Chung
- Inter-University Semiconductor Research Center, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, South Korea
| | - Jeng-Hun Suh
- School of Electrical and Computer Engineering, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, South Korea
| | - Sungho Kim
- School of Electrical and Computer Engineering, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, South Korea
| | - Kyookeun Lee
- Inter-University Semiconductor Research Center, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, South Korea
| | - Nathan J Wittenberg
- Department of Electrical and Computer Engineering, University of Minnesota, 200 Union St SE, Minneapolis, MN, 55455, USA; Department of Chemistry, Lehigh University, Bethlehem, PA, 18015, USA
| | - Sang-Hyun Oh
- Department of Electrical and Computer Engineering, University of Minnesota, 200 Union St SE, Minneapolis, MN, 55455, USA
| | - Byoungho Lee
- School of Electrical and Computer Engineering, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, South Korea
| | - Sin-Doo Lee
- School of Electrical and Computer Engineering, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, South Korea; Inter-University Semiconductor Research Center, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, South Korea.
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12
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Efimova SS, Tertychnaya TE, Lavrenov SN, Ostroumova OS. The Mechanisms of Action of Triindolylmethane Derivatives on Lipid Membranes. Acta Naturae 2019; 11:38-45. [PMID: 31720015 PMCID: PMC6826156 DOI: 10.32607/20758251-2019-11-3-38-45] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022] Open
Abstract
The effects of new synthetic antibacterial agents – tris(1-pentyl-1H-indol-3-yl)methylium chloride
(LCTA-1975) and (1-(4-(dimethylamino)-2,5-dioxo-2,5-dihydro-1H-pyrrol-3-yl)-1H-indol-3-yl)bis(1-propyl-
1H-indol-3-yl)methylium chloride (LCTA-2701 – on model lipid membranes were studied. The ability of
the tested agents to form ion-conductive transmembrane pores, influence the electrical stability of lipid
bilayers and the phase transition of membrane lipids, and cause the deformation and fusion of lipid vesicles
was investigated. It was established that both compounds exert a strong detergent effect on model membranes.
The results of differential scanning microcalorimetry and measuring of the threshold transmembrane voltage
that caused membrane breakdown before and after adsorption of LCTA-1975 and LCTA-2701 indicated that both
agents cause disordering of membrane lipids. Synergism of the uncoupling action of antibiotics and the
alkaloid capsaicin on model lipid membranes was shown. The threshold concentration of the antibiotic that
caused an increase in the ion permeability of the lipid bilayer depended on the membrane lipid composition.
It was lower by an order of magnitude in the case of negatively charged lipid bilayers than for the uncharged
membranes. This can be explained by the positive charge of the tested agents. At the same time, LCTA-2701 was
characterized by greater efficiency than LCTA-1975. In addition to its detergent action, LCTA-2701 can induce
ion-permeable transmembrane pores: step-like current fluctuations corresponding to the opening and closing of
individual ion channels were observed. The difference in the mechanisms of action might be related to the
structural features of the antibiotic molecules: in the LCTA-1975 molecule, all three substituents at the
nitrogen atoms of the indole rings are identical and represent n-alkyl (pentyl) groups, while LCTA-2701
contains a maleimide group, along with two alkyl substituents (n-propyl). The obtained results might be
relevant to our understanding of the mechanism of action of new antibacterial agents, explaining the
difference in the selectivity of action of the tested agents on the target microorganisms and their
toxicity to human cells. Model lipid membranes should be used in further studies of the trends in
the modification and improvement of the structures of new antibacterial agents.
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Affiliation(s)
- S. S. Efimova
- Institute of Cytology, Russian Academy of Sciences, Tikhoretsky Ave. 4, St. Petersburg, 194064, Russia
| | - T. E. Tertychnaya
- Institute of Cytology, Russian Academy of Sciences, Tikhoretsky Ave. 4, St. Petersburg, 194064, Russia
| | - S. N. Lavrenov
- Gause Institute of New Antibiotics, Russian Academy of Medical Sciences, Bolshaya Pirogovskaya Str. 11, Moscow, 119021, Russia
| | - O. S. Ostroumova
- Institute of Cytology, Russian Academy of Sciences, Tikhoretsky Ave. 4, St. Petersburg, 194064, Russia
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13
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Jeong KB, Luo K, Lee H, Lim MC, Yu J, Choi SJ, Kim KB, Jeon TJ, Kim YR. Alpha-Hederin Nanopore for Single Nucleotide Discrimination. ACS NANO 2019; 13:1719-1727. [PMID: 30657663 DOI: 10.1021/acsnano.8b07797] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Various types of biological and synthetic nanopores have been developed and utilized for the high-throughput investigation of individual biomolecules. Biological nanopores made with channel proteins are so far superior to solid-state ones in terms of sensitivity and reproducibility. However, the performance of a biological nanopore is dependent on the protein in the channel structure its dimensions are predetermined and are difficult to modify for broader applications. Here inspired by the cytotoxic mechanisms of a saponin derivative, alpha-hederin, we report a nonproteinaceous nanopore that can be formed spontaneously in a lipid membrane. We propose the pore-forming mechanism of alpha-hederin in a cholesterol-rich lipid membrane and a strategy to control the pore-forming rate by a lipid partitioning method. The small diameter and effective thickness of alpha-hederin nanopores enabled us to discriminate ssDNA homopolymers as well as four types of nucleotides, showing its potential as a DNA sequencing tool.
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Affiliation(s)
- Ki-Baek Jeong
- Graduate School of Biotechnology and Department of Food Science and Biotechnology , Kyung Hee University , Yongin 17104 , Republic of Korea
| | - Ke Luo
- Graduate School of Biotechnology and Department of Food Science and Biotechnology , Kyung Hee University , Yongin 17104 , Republic of Korea
| | - Hwankyu Lee
- Department of Chemical Engineering , Dankook University , Yongin 16891 , Republic of Korea
| | - Min-Cheol Lim
- Research Group of Food Safety , Korea Food Research Institute , 245, Nongsaengmyeong-ro , Iseo-myeon, Wanju-gun , Jeollabuk-do 55365 , Republic of Korea
| | - Jin Yu
- Department of Applied Food System, Major of Food Science & Technology , Seoul Women's University , Seoul 01797 , Republic of Korea
| | - Soo-Jin Choi
- Department of Applied Food System, Major of Food Science & Technology , Seoul Women's University , Seoul 01797 , Republic of Korea
| | - Ki-Bum Kim
- Department of Materials Science and Engineering , Seoul National University , Seoul 08826 , Republic of Korea
| | - Tae-Joon Jeon
- Department of Biological Engineering , Inha University , Incheon 22212 , Republic of Korea
| | - Young-Rok Kim
- Graduate School of Biotechnology and Department of Food Science and Biotechnology , Kyung Hee University , Yongin 17104 , Republic of Korea
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14
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Ahmed S, Matsumura K, Hamada T. Hydrophobic Polyampholytes and Nonfreezing Cold Temperature Stimulate Internalization of Au Nanoparticles to Zwitterionic Liposomes. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2019; 35:1740-1748. [PMID: 29936842 DOI: 10.1021/acs.langmuir.8b00920] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Nanomedicine relies on the effective internalization of nanoparticles combined with polymeric nanocarriers into living cells. Thus, exploration of internalization is essential for improving the efficacy of nanoparticle-based strategies in clinical practice. Here, we investigated the physicochemical internalization of gold nanoparticles (AuNPs) conjugated with hydrophobic polyampholytes into cell-sized liposomes at a low but nonfrozen temperature. The hydrophobic polyampholytes localized in the disordered phase of the membrane, and internalization of AuNPs was enhanced in the presence of hydrophobic polyampholytes together with incubation at -3 °C as compared to 25 °C. These results contribute toward a mechanistic understanding for developing a model nanomaterials-driven delivery system based on hydrophobic polyampholytes and low temperature.
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Affiliation(s)
- Sana Ahmed
- School of Materials Science , Japan Advanced Institute of Science and Technology , Nomi , Ishikawa 923-1292 , Japan
| | - Kazuaki Matsumura
- School of Materials Science , Japan Advanced Institute of Science and Technology , Nomi , Ishikawa 923-1292 , Japan
| | - Tsutomu Hamada
- School of Materials Science , Japan Advanced Institute of Science and Technology , Nomi , Ishikawa 923-1292 , Japan
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15
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Tsubone TM, Junqueira HC, Baptista MS, Itri R. Contrasting roles of oxidized lipids in modulating membrane microdomains. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2018; 1861:660-669. [PMID: 30605637 DOI: 10.1016/j.bbamem.2018.12.017] [Citation(s) in RCA: 40] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/20/2018] [Revised: 12/07/2018] [Accepted: 12/27/2018] [Indexed: 01/06/2023]
Abstract
Lipid rafts display a lateral heterogeneity forming membrane microdomains that hold a fundamental role on biological membranes and are indispensable to physiological functions of cells. Oxidative stress in cellular environments may cause lipid oxidation, changing membrane composition and organization, thus implying in effects in cell signaling and even loss of homeostasis. The individual contribution of oxidized lipid species to the formation or disruption of lipid rafts in membranes still remains unknown. Here, we investigate the role of different structures of oxidized phospholipids on rafts microdomains by carefully controlling the membrane composition. Our experimental approach based on fluorescence microscopy of giant unilamellar vesicles (GUV) enables the direct visualization of the impact of hydroperoxidized POPC lipid (referred to as POPCOOH) and shortened chain lipid PazePC (1-palmitoyl-2-azelaoyl-sn-glycero-3-phosphocholine) on phase separation. We found that the molecular structure of oxidized lipid is of paramount importance on lipid mixing and/or demixing. The hydrophobic mismatch promoted by POPCOOH coupled to its cylindrical molecular shape favor microdomains formation. In contrast, the conical shape of PazePC causes disarrangement of lipid 2D organized platforms. Our findings contribute to better unraveling how oxidized phospholipids can trigger formation or disruption of lipid rafts. As a consequence, phospholipid oxidation may indirectly affect association or dissociation of key biomolecules in the rafts thus altering cell signaling and homeostasis.
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Affiliation(s)
- Tayana Mazin Tsubone
- Department of Applied Physics, Institute of Physics, University of São Paulo, SP, Brazil
| | | | - Maurício S Baptista
- Department of Biochemistry, Institute of Chemistry, University of São Paulo, SP, Brazil
| | - Rosangela Itri
- Department of Applied Physics, Institute of Physics, University of São Paulo, SP, Brazil.
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16
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Suzuki K, Machida K, Yamaguchi K, Sugawara T. Photo-triggered recognition between host and guest compounds in a giant vesicle encapsulating photo-pierceable vesicles. Chem Phys Lipids 2018; 210:70-75. [DOI: 10.1016/j.chemphyslip.2017.11.008] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2017] [Revised: 11/08/2017] [Accepted: 11/08/2017] [Indexed: 01/18/2023]
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17
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Efimova SS, Ostroumova OS. Dipole Modifiers Regulate Lipid Lateral Heterogeneity in Model Membranes. Acta Naturae 2017; 9:67-74. [PMID: 28740728 PMCID: PMC5509002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
In this study we report on experimental observations of giant unilamellar liposomes composed of ternary mixtures of cholesterol (Chol), phospholipids with relatively low Tmelt (DOPC, POPC, or DPoPC) and high Tmelt (sphingomyelin (SM), or tetramyristoyl cardiolipin (TMCL)) and their phase behaviors in the presence and absence of dipole modifiers. It was shown that the ratios of liposomes exhibiting noticeable phase separation decrease in the series POPC, DOPC, DPoPC regardless of any high-Tmelt lipid. Substitution of SM for TMCL led to increased lipid phase segregation. Taking into account the fact that the first and second cases corresponded to a reduction in the thickness of the lipid domains enriched in low- and high-Tmelt lipids, respectively, our findings indicate that the phase behavior depends on thickness mismatch between the ordered and disordered domains. The dipole modifiers, flavonoids and styrylpyridinium dyes, reduced the phase segregation of membranes composed of SM, Chol, and POPC (or DOPC). The other ternary lipid mixtures tested were not affected by the addition of dipole modifiers. It is suggested that dipole modifiers address the hydrophobic mismatch through fluidization of the ordered and disordered domains. The ability of a modifier to partition into the membrane and fluidize the domains was dictated by the hydrophobicity of modifier molecules, their geometric shape, and the packing density of domain-forming lipids. Phloretin, RH 421, and RH 237 proved the most potent among all the modifiers examined.
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Affiliation(s)
- S. S. Efimova
- Institute of Cytology of the Russian Academy of Sciences, Tikhoretsky av. 4, St. Petersburg 194064 , Russia
| | - O. S. Ostroumova
- Institute of Cytology of the Russian Academy of Sciences, Tikhoretsky av. 4, St. Petersburg 194064 , Russia
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18
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Jimbo T, Sakuma Y, Urakami N, Ziherl P, Imai M. Role of Inverse-Cone-Shape Lipids in Temperature-Controlled Self-Reproduction of Binary Vesicles. Biophys J 2016; 110:1551-1562. [PMID: 27074680 DOI: 10.1016/j.bpj.2016.02.028] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2015] [Revised: 02/17/2016] [Accepted: 02/19/2016] [Indexed: 11/29/2022] Open
Abstract
We investigate a temperature-driven recursive division of binary giant unilamellar vesicles (GUVs). During the heating step of the heating-cooling cycle, the spherical mother vesicle deforms to a budded limiting shape using up the excess area produced by the chain melting of the lipids and then splits off into two daughter vesicles. Upon cooling, the daughter vesicle opens a pore and recovers the spherical shape of the mother vesicle. Our GUVs are composed of DLPE (1,2-dilauroyl-sn-glycero-3-phosphoethanolamine) and DPPC (1,2-dipalmitoyl-sn-glycero-3-phosphocholine). During each cycle, vesicle deformation is monitored by a fast confocal microscope and the images are analyzed to obtain the time evolution of reduced volume and reduced monolayer area difference as the key geometric parameters that quantify vesicle shape. By interpreting the deformation pathway using the area-difference elasticity theory, we conclude that vesicle division relies on (1) a tiny asymmetric distribution of DLPE within the bilayer, which controls the observed deformation from the sphere to the budded shape; and (2) redistribution of DLPE during the deformation-division stage, which ensures that the process is recursive. The spontaneous coupling between membrane curvature and PE lipid distribution is responsible for the observed recursive division of GUVs. These results shed light on the mechanisms of vesicle self-reproduction.
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Affiliation(s)
- Takehiro Jimbo
- Department of Physics, Tohoku University, Aoba, Sendai, Japan
| | - Yuka Sakuma
- Department of Physics, Tohoku University, Aoba, Sendai, Japan
| | - Naohito Urakami
- Department of Physics and Information Sciences, Yamaguchi University, Yamaguchi, Japan
| | - Primož Ziherl
- Faculty of Mathematics and Physics, University of Ljubljana, Ljubljana, Slovenia; Jožef Stefan Institute, Ljubljana, Slovenia
| | - Masayuki Imai
- Department of Physics, Tohoku University, Aoba, Sendai, Japan.
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19
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Ito H, Higuchi Y, Shimokawa N. Coarse-grained molecular dynamics simulation of binary charged lipid membranes: Phase separation and morphological dynamics. Phys Rev E 2016; 94:042611. [PMID: 27841477 DOI: 10.1103/physreve.94.042611] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2016] [Indexed: 06/06/2023]
Abstract
Biomembranes, which are mainly composed of neutral and charged lipids, exhibit a large variety of functional structures and dynamics. Here, we report a coarse-grained molecular dynamics (MD) simulation of the phase separation and morphological dynamics in charged lipid bilayer vesicles. The screened long-range electrostatic repulsion among charged head groups delays or inhibits the lateral phase separation in charged vesicles compared with neutral vesicles, suggesting the transition of the phase-separation mechanism from spinodal decomposition to nucleation or homogeneous dispersion. Moreover, the electrostatic repulsion causes morphological changes, such as pore formation, and further transformations into disk, string, and bicelle structures, which are spatiotemporally coupled to the lateral segregation of charged lipids. Based on our coarse-grained MD simulation, we propose a plausible mechanism of pore formation at the molecular level. The pore formation in a charged-lipid-rich domain is initiated by the prior disturbance of the local molecular orientation in the domain.
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Affiliation(s)
- Hiroaki Ito
- Department of Mechanical Engineering, Graduate School of Engineering, Osaka University, Osaka 565-0871, Japan
| | - Yuji Higuchi
- Institute for Materials Research, Tohoku University, Miyagi 980-8577, Japan
| | - Naofumi Shimokawa
- School of Materials Science, Japan Advanced Institute of Science and Technology, Ishikawa 923-1292, Japan
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20
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Himeno H, Ito H, Higuchi Y, Hamada T, Shimokawa N, Takagi M. Coupling between pore formation and phase separation in charged lipid membranes. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2015; 92:062713. [PMID: 26764733 DOI: 10.1103/physreve.92.062713] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/23/2015] [Indexed: 06/05/2023]
Abstract
We investigated the effect of charge on the membrane morphology of giant unilamellar vesicles (GUVs) composed of various mixtures containing charged lipids. We observed the membrane morphologies by fluorescent and confocal laser microscopy in lipid mixtures consisting of a neutral unsaturated lipid [dioleoylphosphatidylcholine (DOPC)], a neutral saturated lipid [dipalmitoylphosphatidylcholine (DPPC)], a charged unsaturated lipid [dioleoylphosphatidylglycerol (DOPG((-)))], a charged saturated lipid [dipalmitoylphosphatidylglycerol (DPPG((-)))], and cholesterol (Chol). In binary mixtures of neutral DOPC-DPPC and charged DOPC-DPPG((-))), spherical vesicles were formed. On the other hand, pore formation was often observed with GUVs consisting of DOPG((-))) and DPPC. In a DPPC-DPPG((-)))-Chol ternary mixture, pore-formed vesicles were also frequently observed. The percentage of pore-formed vesicles increased with the DPPG((-))) concentration. Moreover, when the head group charges of charged lipids were screened by the addition of salt, pore-formed vesicles were suppressed in both the binary and ternary charged lipid mixtures. We discuss the mechanisms of pore formation in charged lipid mixtures and the relationship between phase separation and the membrane morphology. Finally, we reproduce the results seen in experimental systems by using coarse-grained molecular dynamics simulations.
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Affiliation(s)
- Hiroki Himeno
- School of Materials Science, Japan Advanced Institute of Science and Technology, 1-1 Asahidai, Nomi, Ishikawa 923-1292, Japan
- Health Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Takamatsu 761-0395, Japan
| | - Hiroaki Ito
- Department of Physics, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan
| | - Yuji Higuchi
- Institute for Materials Research, Tohoku University, Sendai 980-8577, Japan
| | - Tsutomu Hamada
- School of Materials Science, Japan Advanced Institute of Science and Technology, 1-1 Asahidai, Nomi, Ishikawa 923-1292, Japan
| | - Naofumi Shimokawa
- School of Materials Science, Japan Advanced Institute of Science and Technology, 1-1 Asahidai, Nomi, Ishikawa 923-1292, Japan
| | - Masahiro Takagi
- School of Materials Science, Japan Advanced Institute of Science and Technology, 1-1 Asahidai, Nomi, Ishikawa 923-1292, Japan
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21
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Sakuma Y, Imai M. From vesicles to protocells: the roles of amphiphilic molecules. Life (Basel) 2015; 5:651-75. [PMID: 25738256 PMCID: PMC4390873 DOI: 10.3390/life5010651] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2014] [Revised: 02/11/2015] [Accepted: 02/24/2015] [Indexed: 02/05/2023] Open
Abstract
It is very challenging to construct protocells from molecular assemblies. An important step in this challenge is the achievement of vesicle dynamics that are relevant to cellular functions, such as membrane trafficking and self-reproduction, using amphiphilic molecules. Soft matter physics will play an important role in the development of vesicles that have these functions. Here, we show that simple binary phospholipid vesicles have the potential to reproduce the relevant functions of adhesion, pore formation and self-reproduction of vesicles, by coupling the lipid geometries (spontaneous curvatures) and the phase separation. This achievement will elucidate the pathway from molecular assembly to cellular life.
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Affiliation(s)
- Yuka Sakuma
- Department of Physics, Tohoku University, Aoba, Sendai 980-8578, Japan.
| | - Masayuki Imai
- Department of Physics, Tohoku University, Aoba, Sendai 980-8578, Japan.
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22
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Modifiers of membrane dipole potentials as tools for investigating ion channel formation and functioning. INTERNATIONAL REVIEW OF CELL AND MOLECULAR BIOLOGY 2015; 315:245-97. [PMID: 25708465 DOI: 10.1016/bs.ircmb.2014.12.001] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Electrostatic fields generated on and within biological membranes play a fundamental role in key processes in cell functions. The role of the membrane dipole potential is of particular interest because of its powerful impact on membrane permeability and lipid-protein interactions, including protein insertion, oligomerization, and function. The membrane dipole potential is defined by the orientation of electric dipoles of lipid headgroups, fatty acid carbonyl groups, and membrane-adsorbed water. As a result, the membrane interior is several hundred millivolts more positive than the external aqueous phase. This potential decrease depends on the lipid, and especially sterol, composition of the membrane. The adsorption of certain electroneutral molecules known as dipole modifiers may also lead to significant changes in the magnitude of the potential decrease. These agents are widely used to study the effects of the dipole potential on membrane transport. This review presents a critical analysis of a variety of data from studies dedicated to ion channel formation and functioning in membranes with different dipole potentials. The types of ion channels found in cellular membranes and pores formed by antimicrobial agents and toxins in artificial lipid membranes are summarized. The mechanisms underlying the influence of the membrane dipole potential on ion channel activity, including dipole-dipole and charge-dipole interactions in the pores and in membranes, are discussed. A hypothesis, in which lipid rafts in both model and cellular membranes also modulate ion channel activity by virtue of an increased or decreased dipole potential, is also considered.
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23
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Dehghan A, Pastor KA, Shi AC. Line tension of multicomponent bilayer membranes. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2015; 91:022713. [PMID: 25768537 DOI: 10.1103/physreve.91.022713] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/26/2014] [Indexed: 06/04/2023]
Abstract
The line tension or edge energy of bilayer membranes self-assembled from binary amphiphilic molecules is studied using self-consistent-field theory (SCFT). Specifically, solutions of the SCFT equations corresponding to an infinite membrane with a circular pore, or an open membrane, are obtained for a coarse-grained model in which the amphiphilic species and hydrophilic solvents are represented by ABandED diblock copolymers and C homopolymers, respectively. The edge energy of the membrane is extracted from the free energy of the open membranes. Results for membranes composed of mixtures of symmetric and cone- or inverse cone-shaped amphiphilic molecules with neutral and/or repulsive interactions are obtained and analyzed. It is observed that an increase in the concentration of the cone-shaped species leads to a decrease of the line tension. In contrast, adding inverse cone-shaped copolymers results in an increase of the line tension. Furthermore, the density profile of the copolymers reveals that the line tension is regulated by the distribution of the amphiphiles at the bilayer edge.
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Affiliation(s)
- Ashkan Dehghan
- Department of Physics and Astronomy, McMaster University, Hamilton, Ontario, Canada L8S 4M1
| | - Kyle A Pastor
- Department of Physics and Astronomy, McMaster University, Hamilton, Ontario, Canada L8S 4M1
| | - An-Chang Shi
- Department of Physics and Astronomy, McMaster University, Hamilton, Ontario, Canada L8S 4M1
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24
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Efimova SS, Schagina LV, Ostroumova OS. Investigation of channel-forming activity of polyene macrolide antibiotics in planar lipid bilayers in the presence of dipole modifiers. Acta Naturae 2014; 6:67-79. [PMID: 25558397 PMCID: PMC4273094] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/02/2022] Open
Abstract
The role of membrane components, sterols, phospholipids and sphingolipids in the formation and functioning of ion-permeable nanopores formed by antifungal macrolide antibiotics, amphotericin B, nystatin and filipin in planar lipid bilayers was studied. Dipole modifiers, flavonoids and styryl dyes, were used as a tool to study the molecular mechanisms of polyene channel-forming activity. The introduction of dipole modifiers into the membrane bathing solutions was shown to change the conductance of single channels and the steadystate transmembrane current induced by polyene antibiotics in the sterol-containing phospholipid-bilayers. The conductance of single amphotericin B channels was found to depend on the dipole potential of the membrane. The experiments with various phospholipids, sterols, and polyenes led to the assumption that the shape of a phospholipid molecule, the presence of double bonds at the positions 7 and 22 of a sterol molecule, the number of conjugated double bonds, and the presence of an amino sugar in the polyene antibiotic molecule are important factors impacting the stability of polyene-lipid complexes forming ion-permeable pores. Experimental and literature data presented in the paper suggest that the channel-forming activity of polyene antibiotics is also affected by the physicochemical properties of polyene-enriched ordered membrane domains.
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Affiliation(s)
- S. S. Efimova
- Institute of Cytology, Russian Academy of Sciences, Tikhoretsky Ave., 4, St. Petersburg, 194064, Russia
| | - L. V. Schagina
- Institute of Cytology, Russian Academy of Sciences, Tikhoretsky Ave., 4, St. Petersburg, 194064, Russia
| | - O. S. Ostroumova
- Institute of Cytology, Russian Academy of Sciences, Tikhoretsky Ave., 4, St. Petersburg, 194064, Russia
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25
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Ryu YS, Lee IH, Suh JH, Park SC, Oh S, Jordan LR, Wittenberg NJ, Oh SH, Jeon NL, Lee B, Parikh AN, Lee SD. Reconstituting ring-rafts in bud-mimicking topography of model membranes. Nat Commun 2014; 5:4507. [PMID: 25058275 PMCID: PMC4124864 DOI: 10.1038/ncomms5507] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2014] [Accepted: 06/25/2014] [Indexed: 01/30/2023] Open
Abstract
During vesicular trafficking and release of enveloped viruses, the budding and fission processes dynamically remodel the donor cell membrane in a protein- or a lipid-mediated manner. In all cases, in addition to the generation or relief of the curvature stress, the buds recruit specific lipids and proteins from the donor membrane through restricted diffusion for the development of a ring-type raft domain of closed topology. Here, by reconstituting the bud topography in a model membrane, we demonstrate the preferential localization of cholesterol- and sphingomyelin-enriched microdomains in the collar band of the bud-neck interfaced with the donor membrane. The geometrical approach to the recapitulation of the dynamic membrane reorganization, resulting from the local radii of curvatures from nanometre-to-micrometre scales, offers important clues for understanding the active roles of the bud topography in the sorting and migration machinery of key signalling proteins involved in membrane budding.
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Affiliation(s)
- Yong-Sang Ryu
- School of Electrical Engineering #032, Seoul National University, Kwanak P.O. Box 34, Seoul 151-600, Republic of Korea
| | - In-Ho Lee
- School of Electrical Engineering #032, Seoul National University, Kwanak P.O. Box 34, Seoul 151-600, Republic of Korea
| | - Jeng-Hun Suh
- School of Electrical Engineering #032, Seoul National University, Kwanak P.O. Box 34, Seoul 151-600, Republic of Korea
| | - Seung Chul Park
- School of Electrical Engineering #032, Seoul National University, Kwanak P.O. Box 34, Seoul 151-600, Republic of Korea
| | - Soojung Oh
- World Class University (WCU) Program of Multiscale Mechanical Design, School of Mechanical and Aerospace Engineering, Seoul National University, Seoul 151-744, Republic of Korea
| | - Luke R. Jordan
- Department of Biomedical Engineering, University of Minnesota, Minneapolis, Minnesota 55455, USA
| | - Nathan J. Wittenberg
- Department of Electrical and Computer Engineering, University of Minnesota, Minneapolis, Minnesota 55455, USA
| | - Sang-Hyun Oh
- Department of Biomedical Engineering, University of Minnesota, Minneapolis, Minnesota 55455, USA
- Department of Electrical and Computer Engineering, University of Minnesota, Minneapolis, Minnesota 55455, USA
| | - Noo Li Jeon
- World Class University (WCU) Program of Multiscale Mechanical Design, School of Mechanical and Aerospace Engineering, Seoul National University, Seoul 151-744, Republic of Korea
| | - Byoungho Lee
- School of Electrical Engineering #032, Seoul National University, Kwanak P.O. Box 34, Seoul 151-600, Republic of Korea
| | - Atul N. Parikh
- Department of Biomedical Engineering and Chemical Engineering and Materials Science, University of California, Davis, California 95616, USA
- Centre for Biomimetic Sensor Science, School of Materials Science and Engineering, Nanyang Technological University, Singapore 637553, Singapore
| | - Sin-Doo Lee
- School of Electrical Engineering #032, Seoul National University, Kwanak P.O. Box 34, Seoul 151-600, Republic of Korea
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26
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Efimova SS, Schagina LV, Ostroumova OS. Channel-forming activity of cecropins in lipid bilayers: effect of agents modifying the membrane dipole potential. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2014; 30:7884-92. [PMID: 24969512 DOI: 10.1021/la501549v] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
Cecropin A (CecA) and cecropin B (CecB) added to one side of a bilayer formed from equimolar mixtures of DOPS and DOPE, DPhPS and DPhPE, or DOPS, DOPE, and Chol leads to the formation of well-defined and well-reproducible ion channels of different conductance levels while cecropin P1 (CecP1) does not induce pore formation at micromolar concentrations. We found three populations of CecA channels: pores with weak cationic selectivity, pores with weak anionic selectivity, and pores that were nonselective. The dipole modifiers, flavonoids and styryl dyes, were used to modulate the channel-forming activity of CecA and CecB. The mean conductance of single CecA channels is affected by the influence of dipole modifiers on the lipid packing in the membrane. A decrease in the membrane dipole potential is accompanied by a decrease in the steady-state transmembrane current induced by CecA and CecB in cholesterol-free and cholesterol-containing bilayers. The observed changes in the channel-forming activity might be caused by an increase in the energy barrier for the interfacial accumulation of cecropin monomers. This finding indicates that the negative pole of the cecropin dipole is inserted into the membrane.
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Affiliation(s)
- Svetlana S Efimova
- Institute of Cytology of the Russian Academy of Sciences , St. Petersburg 194064, Russia
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27
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Sakuma Y, Taniguchi T, Kawakatsu T, Imai M. Tubular membrane formation of binary giant unilamellar vesicles composed of cylinder and inverse-cone-shaped lipids. Biophys J 2014; 105:2074-81. [PMID: 24209852 DOI: 10.1016/j.bpj.2013.09.021] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2013] [Revised: 08/20/2013] [Accepted: 09/09/2013] [Indexed: 11/28/2022] Open
Abstract
We have succeeded in controlling tubular membrane formations in binary giant unilamellar vesicles (GUVs) using a simple temperature changing between the homogeneous one-phase region and the two-phase coexistence region. The binary GUV is composed of inverse-cone (bulky hydrocarbon chains and a small headgroup) and cylinder-shaped lipids. When the temperature was set in the two-phase coexistence region, the binary GUV had a spherical shape with solidlike domains. By increasing the temperature to the homogeneous one-phase region, the excess area created by the chain melting of the lipid produced tubes inside the GUV. The tubes had a radius on the micrometer scale and were stable in the one-phase region. When we again decreased the temperature to the two-phase coexisting region, the tubes regressed and the GUVs recovered their phase-separated spherical shape. We infer that the tubular formation was based on the mechanical balance of the vesicle membrane (spontaneous tension) coupled with the asymmetric distribution of the inverse-cone-shaped lipids between the inner and outer leaflets of the vesicle (lipid sorting).
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Affiliation(s)
- Yuka Sakuma
- Department of Physics, Tohoku University, Aoba, Sendai, Japan.
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28
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Beaugrand M, Arnold A, Hénin J, Warschawski DE, Williamson PTF, Marcotte I. Lipid concentration and molar ratio boundaries for the use of isotropic bicelles. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2014; 30:6162-70. [PMID: 24797658 PMCID: PMC4072726 DOI: 10.1021/la5004353] [Citation(s) in RCA: 47] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2014] [Revised: 05/02/2014] [Indexed: 05/27/2023]
Abstract
Bicelles are model membranes generally made of long-chain dimyristoylphosphatidylcholine (DMPC) and short-chain dihexanoyl-PC (DHPC). They are extensively used in the study of membrane interactions and structure determination of membrane-associated peptides, since their composition and morphology mimic the widespread PC-rich natural eukaryotic membranes. At low DMPC/DHPC (q) molar ratios, fast-tumbling bicelles are formed in which the DMPC bilayer is stabilized by DHPC molecules in the high-curvature rim region. Experimental constraints imposed by techniques such as circular dichroism, dynamic light scattering, or microscopy may require the use of bicelles at high dilutions. Studies have shown that such conditions induce the formation of small aggregates and alter the lipid-to-detergent ratio of the bicelle assemblies. The objectives of this work were to determine the exact composition of those DMPC/DHPC isotropic bicelles and study the lipid miscibility. This was done using (31)P nuclear magnetic resonance (NMR) and exploring a wide range of lipid concentrations (2-400 mM) and q ratios (0.15-2). Our data demonstrate how dilution modifies the actual DMPC/DHPC molar ratio in the bicelles. Care must be taken for samples with a total lipid concentration ≤250 mM and especially at q ∼ 1.5-2, since moderate dilutions could lead to the formation of large and slow-tumbling lipid structures that could hinder the use of solution NMR methods, circular dichroism or dynamic light scattering studies. Our results, supported by infrared spectroscopy and molecular dynamics simulations, also show that phospholipids in bicelles are largely segregated only when q > 1. Boundaries are presented within which control of the bicelles' q ratio is possible. This work, thus, intends to guide the choice of q ratio and total phospholipid concentration when using isotropic bicelles.
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Affiliation(s)
- Maïwenn Beaugrand
- Department
of Chemistry, Université du Québec
à Montréal and Centre Québécois sur les
Matériaux Fonctionnels, P.O. Box 8888, Downtown Station, Montreal, Canada H3C 3P8
| | - Alexandre
A. Arnold
- Department
of Chemistry, Université du Québec
à Montréal and Centre Québécois sur les
Matériaux Fonctionnels, P.O. Box 8888, Downtown Station, Montreal, Canada H3C 3P8
| | - Jérôme Hénin
- Laboratoire
de Biochimie Théorique, CNRS, Université
Paris Diderot and Institut de Biologie Physico-Chimique, 13 rue Pierre et Marie-Curie, 75005 Paris, France
| | - Dror E. Warschawski
- Laboratoire
de Biologie Physico-Chimique des Protéines Membranaires, CNRS, Université Paris Diderot and Institut de Biologie Physico-Chimique, 13 rue Pierre et Marie-Curie, 75005 Paris, France
| | - Philip T. F. Williamson
- School
of Biological Sciences, Highfield Campus,
University of Southampton, Southampton, SO17 1BJ, United Kingdom
| | - Isabelle Marcotte
- Department
of Chemistry, Université du Québec
à Montréal and Centre Québécois sur les
Matériaux Fonctionnels, P.O. Box 8888, Downtown Station, Montreal, Canada H3C 3P8
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Funkhouser CM, Solis FJ, Thornton K. Dynamics of coarsening in multicomponent lipid vesicles with non-uniform mechanical properties. J Chem Phys 2014; 140:144908. [DOI: 10.1063/1.4870478] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023] Open
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30
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The interaction of dipole modifiers with amphotericin-ergosterol complexes. Effects of phospholipid and sphingolipid membrane composition. EUROPEAN BIOPHYSICS JOURNAL: EBJ 2014; 43:207-15. [DOI: 10.1007/s00249-014-0946-0] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/07/2013] [Revised: 01/30/2014] [Accepted: 02/05/2014] [Indexed: 10/25/2022]
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31
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Zhang J, Xu G, Zhou Y, Zhou T, Zhai X. Polyhedral vesicles with crystalline bilayers formed from catanionic surfactant mixtures of fluorocarbon and hydrocarbon amphiphiles. J Colloid Interface Sci 2013; 407:318-26. [PMID: 23849823 DOI: 10.1016/j.jcis.2013.06.025] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2013] [Revised: 06/11/2013] [Accepted: 06/12/2013] [Indexed: 11/28/2022]
Abstract
Salt-free catanionic mixtures of perfluorononanoic acid (C8F17COOH) and tetradecyltrimethylammonium hydroxide (TTAOH) in aqueous solution show rich and interesting self-assembly properties. With the addition of TTAOH to a C8F17COOH solution, a structural transition from polyhedral vesicles with crystalline bilayers to spherical vesicles with fluid bilayers was observed at room temperature, which was demonstrated by cryo- and FF-TEM observations, DSC and WAXS measurements. It is interesting that both uni-lamellar and multi-lamellar polyhedral vesicles were formed in these fluoro- and hydrocarbon catanionic surfactant mixtures. SAXS measurements were performed to determine the interlamellar spacing of the multi-lamellar polyhedral vesicles. The driving force for the formation of the polyhedral vesicles was the crystallization of the C8F17COO(-) - TTA(+) ion pairs in the bilayers, which induced the excess anionic surfactants to be segregated and concentrated to produce the vertices of the polyhedral vesicles. Besides, the rheological results show that the rheological properties of the C8F17COOH/TTAOH system are greatly affected by the fluorocarbon chains due to their high rigidity and Krafft point. The solutions consisting of polyhedral vesicles have high viscoelasticity and high yield stress values while spherical vesicle solutions are not viscoelastic.
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Affiliation(s)
- Juan Zhang
- Key Laboratory of Colloid and Interface Chemistry, Shandong University, Ministry of Education, Jinan 250100, PR China
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32
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Lorent J, Le Duff CS, Quetin-Leclercq J, Mingeot-Leclercq MP. Induction of highly curved structures in relation to membrane permeabilization and budding by the triterpenoid saponins, α- and δ-Hederin. J Biol Chem 2013; 288:14000-14017. [PMID: 23530040 DOI: 10.1074/jbc.m112.407635] [Citation(s) in RCA: 47] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
The interactions of triterpenoid monodesmosidic saponins, α-hederin and δ-hederin, with lipid membranes are involved in their permeabilizing effect. Unfortunately, the interactions of these saponins with lipid membranes are largely unknown, as are the roles of cholesterol or the branched sugar moieties (two for α-hederin and one for δ-hederin) on the aglycone backbone, hederagenin. The differences in sugar moieties are responsible for differences in the molecular shape of the saponins and the effects on membrane curvature that should be the most positive for α-hederin in a transbilayer direction. In large unilamellar vesicles and monocyte cells, we showed that membrane permeabilization was dependent on the presence of membrane cholesterol and saponin sugar chains, being largest for α-hederin and smallest for hederagenin. In the presence of cholesterol, α-hederin induced the formation of nonbilayer phases with a higher rate of Brownian tumbling or lateral diffusion. A reduction of Laurdan's generalized polarization in relation to change in order of the polar heads of phospholipids was observed. Using giant unilamellar vesicles, we visualized the formation of wrinkled borders, the decrease in liposome size, budding, and the formation of macroscopic pores. All these processes are highly dependent on the sugars linked to the aglycone, with α-hederin showing a greater ability to induce pore formation and δ-hederin being more efficient in inducing budding. Hederagenin induced intravesicular budding but no pore formation. Based on these results, a curvature-driven permeabilization mechanism dependent on the interaction between saponin and sterols and on the molecular shape of the saponin and its ability to induce local spontaneous curvature is proposed.
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Affiliation(s)
- Joseph Lorent
- Cellular and Molecular Pharmacology, Université Catholique de Louvain, B-1200 Bruxelles; Pharmacognosy, Louvain Drug Research Institute, Université Catholique de Louvain, B-1200 Bruxelles
| | - Cécile S Le Duff
- Molecules, Solids and Reactivity, Institute of Condensed Matter and Nanosciences, Université Catholique de Louvain, B-1348 Louvain-la-Neuve, Belgium
| | - Joelle Quetin-Leclercq
- Pharmacognosy, Louvain Drug Research Institute, Université Catholique de Louvain, B-1200 Bruxelles
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Yamada NL. Kinetic process of formation and reconstruction of small unilamellar vesicles consisting of long- and short-chain lipids. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2012; 28:17381-17388. [PMID: 23214978 DOI: 10.1021/la3026842] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
Whereas the phase separation of normal phospholipids induces formation of microdomains on the surface of spherical vesicles, the separation of a long- and short-chain lipids can induce perforation of small unilamellar vesicles (SUVs) and transformation into bilayered micelles (bicelles) because the edges of the bilayers are stabilized by the short-chain lipid microdomain. In this study, the effect of the phase separation of lipids on the transformation behavior of SUVs consisting of a mixture of long- and short-chain lipids was investigated using small-angle neutron scattering. At the temperature jump from below to above the chain melting temperature of the long-chain lipid, T(c), bicelles fused together and transformed into SUVs when their size reached a critical radius. In contrast, a sequential transformation of small SUVs to small bicelles, small bicelles to large bicelles, and large bicelles to large SUVs occurred when the temperature jumped from a value far above T(c) to one slightly above T(c). To the best of my knowledge, this is the first report of such reconstruction of vesicles. By considering the bending energy of the membrane, the line tension of the rim, and the perforation due to the phase separation, the mechanism of the transformation processes was clarified.
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Affiliation(s)
- Norifumi L Yamada
- Neutron Science Laboratory, High Energy Accelerator Research Organization, Tokai, Ibaraki 319-1106, Japan.
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Zhang S, Nelson A, Beales PA. Freezing or wrapping: the role of particle size in the mechanism of nanoparticle-biomembrane interaction. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2012; 28:12831-12837. [PMID: 22717012 DOI: 10.1021/la301771b] [Citation(s) in RCA: 72] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
Understanding the interactions between nanoparticles (NPs) and biological matter is a high-priority research area because of the importance of elucidating the physical mechanisms underlying the interactions leading to NP potential toxicity as well as NP viability as therapeutic vectors in nanomedicine. Here, we use two model membrane systems, giant unilamellar vesicles (GUVs) and supported monolayers, to demonstrate the competition between adhesion and elastic energy at the nanobio interface, leading to different mechanisms of NP-membrane interaction relating to NP size. Small NPs (18 nm) cause a "freeze effect" of otherwise fluid phospholipids, significantly decreasing the phospholipid lateral mobility. The release of tension through stress-induced fracture mechanics results in a single microsize hole in the GUVs after interaction. Large particles (>78 nm) promote membrane wrapping, which leads to increased lipid lateral mobility and the eventual collapse of the vesicles. Electrochemical impedance spectroscopy on the supported monolayer model confirms that differently sized NPs interact differently with the phospholipids in close proximity to the electrode during the lipid desorption process. The time scale of these processes is in accordance with the proposed NP/GUV interaction mechanism.
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Affiliation(s)
- Shengwen Zhang
- Centre for Molecular Nanoscience, School of Chemistry, University of Leeds, Leeds, U.K
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Ishimoto Y, Murashima T, Taniguchi T, Yamamoto R. Two-dimensional lattice liquid models. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2012; 86:031124. [PMID: 23030883 DOI: 10.1103/physreve.86.031124] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/31/2012] [Indexed: 06/01/2023]
Abstract
A family of models of liquid on a two-dimensional lattice (2D lattice liquid models) have been proposed as primitive models of soft-material membrane. As a first step, we have formulated them as single-component, single-layered, classical particle systems on a two-dimensional surface with no explicit viscosity. Among the family of the models, we have shown and constructed two stochastic models, a vicious walk model and a flow model, on an isotropic regular lattice and on some honeycomb lattices of various sizes. In both cases, the dynamics is governed by the nature of the frustration of the particle movements. By simulations, we have found the approximate functional form of the frustration probability and peculiar anomalous diffusions in their time-averaged mean-square displacements in the flow model. The relations to other existing statistical models and possible extensions of the models are also discussed.
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Chen J, Long P, Li H, Hao J. Investigations into the bending constant and edge energy of bilayers of salt-free catanionic vesicles. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2012; 28:5927-5933. [PMID: 22428682 DOI: 10.1021/la2048773] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
Using molecular dynamics simulation, we performed theoretical calculations on the curvature constant and edge energy of bilayers of salt-free, zero-charged, cationic and anionic (catanionic) surfactant vesicles composed of alkylammonium cations (C(m)(+)) and fatty acid anions (C(n)(-)). Both the minimum size and edge energy of vesicles were calculated to examine the relation between the length of the surfactant molecules and the mechanical properties of the catanionic bilayers. Our simulation results clearly demonstrate that, when the chain lengths of the cationic and anionic surfactants are equal, both the edge energy and the rigidity of the catanionic bilayers increase dramatically, changing from around 0.36 to 2.77 kBT·nm(-1) and around 0.86 to 6.51 kBT·nm(-1), respectively. For the smallest catanionic vesicles, the curvature is not uniform and the surfactant molecules adopt a multicurvature arrangement in the vesicle bilayers. We suspect that the multicurvature bending of bilayers of catanionic vesicles is a common phenomenon in rigid bilayer systems, which could aid understanding of ion transport through bilayer membranes.
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Affiliation(s)
- Jingfei Chen
- State Key Laboratory of Solid Lubrication, Lanzhou Institute of Chemical Physics, Chinese Academy of Sciences, Lanzhou 730000, People's Republic of China
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Sakuma Y, Imai M. Model system of self-reproducing vesicles. PHYSICAL REVIEW LETTERS 2011; 107:198101. [PMID: 22181648 DOI: 10.1103/physrevlett.107.198101] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/18/2011] [Indexed: 05/31/2023]
Abstract
Development of self-reproducing vesicle systems is the first step for autopoietic cycles. We established a model self-reproducing vesicle system without the membrane molecule synthesis route. The model vesicle composed of cylinder- and inverse-cone-shaped lipids formed inclusion vesicles inside the mother vesicle, and the inclusion vesicles were then expelled by a temperature cycling. By changing the vesicle composition, the mother vesicles showed a budding-type self-reproduction pathway. A key concept of this system is the coupling of the main-chain transition and the shape of lipids.
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Affiliation(s)
- Yuka Sakuma
- Department of Physics, Ochanomizu University, Bunkyo, Tokyo 112-8610, Japan
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Taniguchi T, Yanagisawa M, Imai M. Numerical investigations of the dynamics of two-component vesicles. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2011; 23:284103. [PMID: 21709319 DOI: 10.1088/0953-8984/23/28/284103] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
We examined the dynamics of the deformation and phase separation of two-component vesicles. First, we numerically investigated the effects of (i) thermal noise, (ii) hydrodynamic flow induced by the line tension of the domain boundary and (iii) composition-dependent bending rigidity on the coarsening dynamics of a phase-separated pattern on the surfaces of vesicles with fixed shapes. The dynamical exponent z (N(DB) ∼ t(-z), the total length of the domain boundaries) of the coarsening of the phase-separated pattern was found to decrease from z = 1/3 under no thermal noise to 1/5 < z < 1/4 when including the effects of thermal noise. We also found that the hydrodynamic effect enhances the coarsening in a bicontinuous phase separation for a spherical vesicle. In phase separations of a shape-fixed tubular vesicle, a band-like phase separation with periodicity along the longer axis of the tube occurs because of the composition-dependent bending rigidity and the higher curvatures at the tube end-caps. Second, we also explored the dynamics of shape deformation coupled with phase separation through the bending rigidity of the membrane which depends on the local composition in lipids and found that the composition-dependent bending rigidity crucially influences the phase separation and deformation of the vesicle. The results of simulations are in good agreement with experimentally observed behavior known as 'shape convergence' (Yanagisawa et al 2008 Phys. Rev. Lett. 100 148102).
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Sakuma Y, Urakami N, Taniguchi T, Imai M. Asymmetric distribution of cone-shaped lipids in a highly curved bilayer revealed by a small angle neutron scattering technique. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2011; 23:284104. [PMID: 21709321 DOI: 10.1088/0953-8984/23/28/284104] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
We have investigated the lipid sorting in a binary small unilamellar vesicle (SUV) composed of cone-shaped (1,2-dihexanoyl-sn-glycero-3-phosphocholine: DHPC) and cylinder-shaped (1,2-dipalmitoyl-sn-glycero-3-phosphocholine: DPPC) lipids. In order to reveal the lipid sorting we adopted a contrast matching technique of small angle neutron scattering (SANS), which extracts the distribution of deuterated lipids in the bilayer quantitatively without steric modification of lipids as in fluorescence probe techniques. First the SANS profile of protonated SUVs at a film contrast condition showed that SUVs have a spherical shape with an inner radius of 190 Å and a bilayer thickness of 40 Å. The SANS profile of deuterated SUVs at a contrast matching condition showed a characteristic scattering profile, indicating an asymmetric distribution of cone-shaped lipids in the bilayer. The characteristic profile was described well by a spherical bilayer model. The fitting revealed that most DHPC molecules are localized in the outer leaflet. Thus the shape of the lipid is strongly coupled with the membrane curvature. We compared the obtained asymmetric distribution of the cone-shaped lipids in the bilayer with the theoretical prediction based on the curvature energy model.
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Affiliation(s)
- Y Sakuma
- Department of Physics, Ochanomizu University, Bunkyo, Tokyo, Japan
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Šachl R, Mikhalyov I, Gretskaya N, Olżyńska A, Hof M, Johansson LBÅ. Distribution of BODIPY-labelled phosphatidylethanolamines in lipid bilayers exhibiting different curvatures. Phys Chem Chem Phys 2011; 13:11694-701. [DOI: 10.1039/c1cp20608g] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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