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Gautam S, Osman AFI, Richeson D, Gholami S, Manandhar B, Alam S, Song WY. Attention 3D U-NET for dose distribution prediction of high-dose-rate brachytherapy of cervical cancer: Direction modulated brachytherapy tandem applicator. Med Phys 2024; 51:5593-5603. [PMID: 38830129 DOI: 10.1002/mp.17238] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2023] [Revised: 03/27/2024] [Accepted: 05/21/2024] [Indexed: 06/05/2024] Open
Abstract
BACKGROUND Direction Modulated Brachytherapy (DMBT) enables conformal dose distributions. However, clinicians may face challenges in creating viable treatment plans within a fast-paced clinical setting, especially for a novel technology like DMBT, where cumulative clinical experience is limited. Deep learning-based dose prediction methods have emerged as effective tools for enhancing efficiency. PURPOSE To develop a voxel-wise dose prediction model using an attention-gating mechanism and a 3D UNET for cervical cancer high-dose-rate (HDR) brachytherapy treatment planning with DMBT six-groove tandems with ovoids or ring applicators. METHODS A multi-institutional cohort of 122 retrospective clinical HDR brachytherapy plans treated to a prescription dose in the range of 4.8-7.0 Gy/fraction was used. A DMBT tandem model was constructed and incorporated onto a research version of BrachyVision Treatment Planning System (BV-TPS) as a 3D solid model applicator and retrospectively re-planned all cases by seasoned experts. Those plans were randomly divided into 64:16:20 as training, validating, and testing cohorts, respectively. Data augmentation was applied to the training and validation sets to increase the size by a factor of 4. An attention-gated 3D UNET architecture model was developed to predict full 3D dose distributions based on high-risk clinical target volume (CTVHR) and organs at risk (OARs) contour information. The model was trained using the mean absolute error loss function, Adam optimization algorithm, a learning rate of 0.001, 250 epochs, and a batch size of eight. In addition, a baseline UNET model was trained similarly for comparison. The model performance was evaluated on the testing dataset by analyzing the outcomes in terms of mean dose values and derived dose-volume-histogram indices from 3D dose distributions and comparing the generated dose distributions against the ground-truth dose distributions using dose statistics and clinically meaningful dosimetric indices. RESULTS The proposed attention-gated 3D UNET model showed competitive accuracy in predicting 3D dose distributions that closely resemble the ground-truth dose distributions. The average values of the mean absolute errors were 1.82 ± 29.09 Gy (vs. 6.41 ± 20.16 Gy for a baseline UNET) in CTVHR, 0.89 ± 1.25 Gy (vs. 0.94 ± 3.96 Gy for a baseline UNET) in the bladder, 0.33 ± 0.67 Gy (vs. 0.53 ± 1.66 Gy for a baseline UNET) in the rectum, and 0.55 ± 1.57 Gy (vs. 0.76 ± 2.89 Gy for a baseline UNET) in the sigmoid. The results showed that the mean absolute error (MAE) for the bladder, rectum, and sigmoid were 0.22 ± 1.22 Gy (3.62%) (p = 0.015), 0.21 ± 1.06 Gy (2.20%) (p = 0.172), and -0.03 ± 0.54 Gy (1.13%) (p = 0.774), respectively. The MAE for D90, V100%, and V150% of the CTVHR were 0.46 ± 2.44 Gy (8.14%) (p = 0.018), 0.57 ± 11.25% (5.23%) (p = 0.283), and -0.43 ± 19.36% (4.62%) (p = 0.190), respectively. The proposed model needs less than 5 s to predict a full 3D dose distribution of 64 × 64 × 64 voxels for any new patient plan, thus making it sufficient for near real-time applications and aiding with decision-making in the clinic. CONCLUSIONS Attention gated 3D-UNET model demonstrated a capability in predicting voxel-wise dose prediction, in comparison to 3D UNET, for DMBT intracavitary brachytherapy planning. The proposed model could be used to obtain dose distributions for near real-time decision-making before DMBT planning and quality assurance. This will guide future automated planning, making the workflow more efficient and clinically viable.
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Affiliation(s)
- Suman Gautam
- Department of Radiation Oncology, Virginia Commonwealth University, Richmond, Virginia, USA
| | | | - Dylan Richeson
- Department of Radiation Oncology, Inova Schar Cancer Institute, Fairfax, Virginia, USA
| | - Somayeh Gholami
- Department of Radiation Oncology, University of Utah, Salt Lake City, Utah, USA
| | - Binod Manandhar
- Department of Radiation Oncology, Virginia Commonwealth University, Richmond, Virginia, USA
| | - Sharmin Alam
- Department of Radiation Oncology, Virginia Commonwealth University, Richmond, Virginia, USA
| | - William Y Song
- Department of Radiation Oncology, Virginia Commonwealth University, Richmond, Virginia, USA
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Fu Q, Chen X, Liu Y, Zhang J, Xu Y, Yang X, Huang M, Men K, Dai J. Improvement of accumulated dose distribution in combined cervical cancer radiotherapy with deep learning-based dose prediction. Front Oncol 2024; 14:1407016. [PMID: 39040460 PMCID: PMC11260613 DOI: 10.3389/fonc.2024.1407016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2024] [Accepted: 06/17/2024] [Indexed: 07/24/2024] Open
Abstract
Purpose Difficulties remain in dose optimization and evaluation of cervical cancer radiotherapy that combines external beam radiotherapy (EBRT) and brachytherapy (BT). This study estimates and improves the accumulated dose distribution of EBRT and BT with deep learning-based dose prediction. Materials and methods A total of 30 patients treated with combined cervical cancer radiotherapy were enrolled in this study. The dose distributions of EBRT and BT plans were accumulated using commercial deformable image registration. A ResNet-101-based deep learning model was trained to predict pixel-wise dose distributions. To test the role of the predicted accumulated dose in clinic, each EBRT plan was designed using conventional method and then redesigned referencing the predicted accumulated dose distribution. Bladder and rectum dosimetric parameters and normal tissue complication probability (NTCP) values were calculated and compared between the conventional and redesigned accumulated doses. Results The redesigned accumulated doses showed a decrease in mean values of V50, V60, and D2cc for the bladder (-3.02%, -1.71%, and -1.19 Gy, respectively) and rectum (-4.82%, -1.97%, and -4.13 Gy, respectively). The mean NTCP values for the bladder and rectum were also decreased by 0.02‰ and 0.98%, respectively. All values had statistically significant differences (p < 0.01), except for the bladder D2cc (p = 0.112). Conclusion This study realized accumulated dose prediction for combined cervical cancer radiotherapy without knowing the BT dose. The predicted dose served as a reference for EBRT treatment planning, leading to a superior accumulated dose distribution and lower NTCP values.
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Affiliation(s)
- Qi Fu
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medial Sciences and Peking Union Medical College, Beijing, China
| | - Xinyuan Chen
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medial Sciences and Peking Union Medical College, Beijing, China
| | - Yuxiang Liu
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medial Sciences and Peking Union Medical College, Beijing, China
- School of Physics and Technology, Wuhan University, Wuhan, China
| | - Jingbo Zhang
- Department of Radiotherapy Technology, The Cancer and Tuberculosis Hospital, Jiamusi, China
| | - Yingjie Xu
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medial Sciences and Peking Union Medical College, Beijing, China
| | - Xi Yang
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medial Sciences and Peking Union Medical College, Beijing, China
| | - Manni Huang
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medial Sciences and Peking Union Medical College, Beijing, China
| | - Kuo Men
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medial Sciences and Peking Union Medical College, Beijing, China
| | - Jianrong Dai
- Department of Radiation Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medial Sciences and Peking Union Medical College, Beijing, China
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Wu Z, Jia X, Lu L, Xu C, Pang Y, Peng S, Liu M, Wu Y. Multi-center Dose Prediction Using Attention-aware Deep learning Algorithm Based on Transformers for Cervical Cancer Radiotherapy. Clin Oncol (R Coll Radiol) 2024; 36:e209-e223. [PMID: 38631974 DOI: 10.1016/j.clon.2024.03.022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2023] [Revised: 02/22/2024] [Accepted: 03/21/2024] [Indexed: 04/19/2024]
Abstract
AIMS Accurate dose delivery is crucial for cervical cancer volumetric modulated arc therapy (VMAT). We aimed to develop a robust deep-learning (DL) algorithm for fast and accurate dose prediction of cervical cancer VMAT in multicenter datasets and then explore the feasibility of the DL algorithm to endometrial cancer VMAT with different prescriptions. MATERIALS AND METHODS We proposed the AtTranNet algorithm for three-dimensional dose prediction. A total of 367 cervical patients were enrolled in this study. Three hundred twenty-two cervical patients from 3 centers were randomly divided into 70%, 10%, and 20% as training, validation, and testing sets, respectively. Forty-five cervical patients from another center were selected for external testing. Moreover, 70 patients of endometrial cancer with different prescriptions were further selected to test the model. Prediction precision was evaluated by dosimetric difference, dose map, and dose-volume histogram metrics. RESULTS The prediction results were all clinically acceptable. The mean absolute error within the body in internal testing was 0.66 ± 0.63%. The maximum |δD| for planning target volume was observed in D98, which is 1.24 ± 2.73 Gy. The maximum |δD| for organs at risk was observed in Dmean of bladder, which is 4.79 ± 3.14 Gy. The maximum |δV| were observed in V40 of pelvic bones, which is 4.77 ± 4.48%. CONCLUSION AtTranNet showed the feasibility and reasonable accuracy in the dose prediction for cervical cancer in multiple centers. The model can also be generalized for endometrial cancer with different prescriptions without any transfer learning.
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Affiliation(s)
- Z Wu
- Department of Digital Medicine, School of Biomedical Engineering and Medical Imaging, Army Medical University, Chongqing, PR China; Department of Radiotherapy, Zigong First People's Hospital, Sichuan, PR China; Yu-Yue Pathology Research Center, Jinfeng Laboratory, Chongqing, PR China
| | - X Jia
- Department of Radiotherapy, The Ninth People's Hospital Affiliated to Shanghai Jiaotong University School of Medicine, Shanghai, PR China
| | - L Lu
- Department of Radiotherapy, Tongling People's Hospital, Anhui, PR China
| | - C Xu
- Department of Radiotherapy, Beijing Luhe Hospital Affiliated to Capital Medical University, Beijing, PR China
| | - Y Pang
- Department of Radiotherapy, Zigong First People's Hospital, Sichuan, PR China
| | - S Peng
- Department of Radiotherapy, Zigong First People's Hospital, Sichuan, PR China
| | - M Liu
- Department of Digital Medicine, School of Biomedical Engineering and Medical Imaging, Army Medical University, Chongqing, PR China.
| | - Y Wu
- Department of Digital Medicine, School of Biomedical Engineering and Medical Imaging, Army Medical University, Chongqing, PR China; Yu-Yue Pathology Research Center, Jinfeng Laboratory, Chongqing, PR China.
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Mathivanan SK, Francis D, Srinivasan S, Khatavkar V, P K, Shah MA. Enhancing cervical cancer detection and robust classification through a fusion of deep learning models. Sci Rep 2024; 14:10812. [PMID: 38734714 PMCID: PMC11088661 DOI: 10.1038/s41598-024-61063-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2023] [Accepted: 04/30/2024] [Indexed: 05/13/2024] Open
Abstract
Cervical cancer, the second most prevalent cancer affecting women, arises from abnormal cell growth in the cervix, a crucial anatomical structure within the uterus. The significance of early detection cannot be overstated, prompting the use of various screening methods such as Pap smears, colposcopy, and Human Papillomavirus (HPV) testing to identify potential risks and initiate timely intervention. These screening procedures encompass visual inspections, Pap smears, colposcopies, biopsies, and HPV-DNA testing, each demanding the specialized knowledge and skills of experienced physicians and pathologists due to the inherently subjective nature of cancer diagnosis. In response to the imperative for efficient and intelligent screening, this article introduces a groundbreaking methodology that leverages pre-trained deep neural network models, including Alexnet, Resnet-101, Resnet-152, and InceptionV3, for feature extraction. The fine-tuning of these models is accompanied by the integration of diverse machine learning algorithms, with ResNet152 showcasing exceptional performance, achieving an impressive accuracy rate of 98.08%. It is noteworthy that the SIPaKMeD dataset, publicly accessible and utilized in this study, contributes to the transparency and reproducibility of our findings. The proposed hybrid methodology combines aspects of DL and ML for cervical cancer classification. Most intricate and complicated features from images can be extracted through DL. Further various ML algorithms can be implemented on extracted features. This innovative approach not only holds promise for significantly improving cervical cancer detection but also underscores the transformative potential of intelligent automation within the realm of medical diagnostics, paving the way for more accurate and timely interventions.
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Affiliation(s)
| | - Divya Francis
- Department of Electronics and Communication Engineering, PSNA College of Engineering and Technology, Dindigul, India
| | - Saravanan Srinivasan
- Department of Computer Science and Engineering, Vel Tech Rangarajan Dr. Sagunthala R&D Institute of Science and Technology, Chennai, India
| | - Vaibhav Khatavkar
- School of Computing Science and Engineering, VIT Bhopal University, Bhopal-Indore Highway Kothrikalan, Sehore, Madhya Pradesh, India
| | - Karthikeyan P
- Department of Computer Applications, School of Computer Science Engineering and Information Systems, Vellore Institute of Technology, Vellore, Tamil Nadu, 632014, India
| | - Mohd Asif Shah
- Kebri Dehar University, Kebri Dehar, Somali, 250, Ethiopia.
- Division of Research and Development, Lovely Professional University, Phagwara, Punjab, 144001, India.
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Flower E, Sykes J, Sullivan E, Busuttil G, Thiruthaneeswaran N, Cosgriff E, Chard J, Salkeld A, Thwaites D. Improving plan quality in cervical brachytherapy using a simple knowledge-based prediction tool for OAR dose (D2cm 3). Brachytherapy 2023; 22:623-629. [PMID: 37296007 DOI: 10.1016/j.brachy.2023.05.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2023] [Revised: 04/28/2023] [Accepted: 05/06/2023] [Indexed: 06/12/2023]
Abstract
PURPOSE Toxicity from cervical brachytherapy has been demonstrated to correlate with the D2cm3 of the bladder, rectum, and bowel. This suggests a simplified version of knowledge-based planning investigating the relationship of the overlap distance for 2cm3 and the D2cm3 from planning may be possible. This work demonstrates the feasibility of simple knowledge-based planning to predict the D2cm3, detect suboptimal plans, and improve plan quality. METHODS AND MATERIALS The overlap volume histogram (OVH) method was used to determine the distance for 2cm3 of overlap between the OAR and CTV_HR. Linear plots modeled the OAR D2cm3 and 2cm3 overlap distance. Two datasets of 20 patients (plans from 43 insertions in each dataset) were used to create two independent models, and the performance of each model was compared using cross-validation. Doses were scaled to ensure consistent CTV_HR D90 values. The predicted D2cm3 is entered as the maximum constraint in the inverse planning algorithm. RESULTS Mean bladder D2cm3 decreased by 2.9% for the models from each dataset, mean rectal D2cm3 decreased 14.9% for the model from dataset 1 and 6.0% for the model from dataset 2, mean sigmoid D2cm3 decreased 10.7% for the model from dataset 1 and 6.1% for the model from dataset 2, mean bowel D2cm3 decreased 4.1% for the model from dataset 1 but no statistically significant difference was observed for the model from dataset 2. CONCLUSIONS A simplified knowledge-based planning method was used to predict D2cm3 and was able to automate optimization of brachytherapy plans for locally advanced cervical cancer.
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Affiliation(s)
- Emily Flower
- Sydney West Radiation Oncology Network, Westmead, New South Wales, Australia; School of Physics, University of Sydney, Sydney, Australia.
| | - Jonathan Sykes
- Sydney West Radiation Oncology Network, Westmead, New South Wales, Australia; School of Physics, University of Sydney, Sydney, Australia
| | - Emma Sullivan
- Sydney West Radiation Oncology Network, Westmead, New South Wales, Australia
| | - Gemma Busuttil
- Sydney West Radiation Oncology Network, Westmead, New South Wales, Australia
| | | | - Eireann Cosgriff
- Sydney West Radiation Oncology Network, Westmead, New South Wales, Australia
| | - Jennifer Chard
- Sydney West Radiation Oncology Network, Westmead, New South Wales, Australia
| | - Alison Salkeld
- Sydney West Radiation Oncology Network, Westmead, New South Wales, Australia; School of Medicine, University of Sydney, Sydney, Australia
| | - David Thwaites
- School of Physics, University of Sydney, Sydney, Australia
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Li Z, Yang Z, Lu J, Zhu Q, Wang Y, Zhao M, Li Z, Fu J. Deep learning-based dose map prediction for high-dose-rate brachytherapy. Phys Med Biol 2023; 68:175015. [PMID: 37589292 DOI: 10.1088/1361-6560/acecd2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2023] [Accepted: 08/02/2023] [Indexed: 08/18/2023]
Abstract
Background. Creating a clinically acceptable plan in the time-sensitive clinic workflow of brachytherapy is challenging. Deep learning-based dose prediction techniques have been reported as promising solutions with high efficiency and accuracy. However, current dose prediction studies mainly target EBRT which are inappropriate for brachytherapy, the model designed specifically for brachytherapy has not yet well-established.Purpose. To predict dose distribution in brachytherapy using a novel Squeeze and Excitation Attention Net (SE_AN) model.Method. We hypothesized the tracks of192Ir inside applicators are essential for brachytherapy dose prediction. To emphasize the applicator contribution, a novel SE module was integrated into a Cascaded UNet to recalibrate informative features and suppress less useful ones. The Cascaded UNet consists of two stacked UNets, with the first designed to predict coarse dose distribution and the second added for fine-tuning 250 cases including all typical clinical applicators were studied, including vaginal, tandem and ovoid, multi-channel, and free needle applicators. The developed SE_AN was subsequently compared to the classic UNet and classic Cascaded UNet (without SE module) models. The model performance was evaluated by comparing the predicted dose against the clinically approved plans using mean absolute error (MAE) of DVH metrics, includingD2ccandD90%.Results. The MAEs of DVH metrics demonstrated that SE_AN accurately predicted the dose with 0.37 ± 0.25 difference for HRCTVD90%, 0.23 ± 0.14 difference for bladderD2cc, and 0.28 ± 0.20 difference for rectumD2cc. In comparison studies, UNet achieved 0.34 ± 0.24 for HRCTV, 0.25 ± 0.20 for bladder, 0.25 ± 0.21 for rectum, and Cascaded UNet achieved 0.42 ± 0.31 for HRCTV, 0.24 ± 0.19 for bladder, 0.23 ± 0.19 for rectum.Conclusion. We successfully developed a method specifically for 3D brachytherapy dose prediction. Our model demonstrated comparable performance to clinical plans generated by experienced dosimetrists. The developed technique is expected to improve the standardization and quality control of brachytherapy treatment planning.
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Affiliation(s)
- Zhen Li
- Shanghai Sixth People's Hospital, Shanghai, People's Republic of China
| | - Zhenyu Yang
- Duke University, Durham, NC, United States of America
| | - Jiayu Lu
- Boston University, Boston, MA, United States of America
| | - Qingyuan Zhu
- Shanghai Sixth People's Hospital, Shanghai, People's Republic of China
| | - Yanxiao Wang
- Shanghai Sixth People's Hospital, Shanghai, People's Republic of China
| | - Mengli Zhao
- Shanghai Sixth People's Hospital, Shanghai, People's Republic of China
| | - Zhaobin Li
- Shanghai Sixth People's Hospital, Shanghai, People's Republic of China
| | - Jie Fu
- Shanghai Sixth People's Hospital, Shanghai, People's Republic of China
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Zhao JZ, Ni R, Chow R, Rink A, Weersink R, Croke J, Raman S. Artificial intelligence applications in brachytherapy: A literature review. Brachytherapy 2023; 22:429-445. [PMID: 37248158 DOI: 10.1016/j.brachy.2023.04.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2023] [Revised: 04/02/2023] [Accepted: 04/07/2023] [Indexed: 05/31/2023]
Abstract
PURPOSE Artificial intelligence (AI) has the potential to simplify and optimize various steps of the brachytherapy workflow, and this literature review aims to provide an overview of the work done in this field. METHODS AND MATERIALS We conducted a literature search in June 2022 on PubMed, Embase, and Cochrane for papers that proposed AI applications in brachytherapy. RESULTS A total of 80 papers satisfied inclusion/exclusion criteria. These papers were categorized as follows: segmentation (24), registration and image processing (6), preplanning (13), dose prediction and treatment planning (11), applicator/catheter/needle reconstruction (16), and quality assurance (10). AI techniques ranged from classical models such as support vector machines and decision tree-based learning to newer techniques such as U-Net and deep reinforcement learning, and were applied to facilitate small steps of a process (e.g., optimizing applicator selection) or even automate the entire step of the workflow (e.g., end-to-end preplanning). Many of these algorithms demonstrated human-level performance and offer significant improvements in speed. CONCLUSIONS AI has potential to augment, automate, and/or accelerate many steps of the brachytherapy workflow. We recommend that future studies adhere to standard reporting guidelines. We also stress the importance of using larger sample sizes and reporting results using clinically interpretable measures.
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Affiliation(s)
- Jonathan Zl Zhao
- Princess Margaret Hospital Cancer Centre, Radiation Medicine Program, Toronto, Canada; Temerty Faculty of Medicine, University of Toronto, Toronto, Canada
| | - Ruiyan Ni
- Princess Margaret Hospital Cancer Centre, Radiation Medicine Program, Toronto, Canada; Department of Medical Biophysics, University of Toronto, Toronto, Canada
| | - Ronald Chow
- Princess Margaret Hospital Cancer Centre, Radiation Medicine Program, Toronto, Canada; Temerty Faculty of Medicine, University of Toronto, Toronto, Canada; Institute of Biomedical Engineering, University of Toronto, Toronto, Canada
| | - Alexandra Rink
- Princess Margaret Hospital Cancer Centre, Radiation Medicine Program, Toronto, Canada; Department of Radiation Oncology, University of Toronto, Toronto, Canada; Department of Medical Biophysics, University of Toronto, Toronto, Canada
| | - Robert Weersink
- Princess Margaret Hospital Cancer Centre, Radiation Medicine Program, Toronto, Canada; Department of Radiation Oncology, University of Toronto, Toronto, Canada; Department of Medical Biophysics, University of Toronto, Toronto, Canada; Institute of Biomedical Engineering, University of Toronto, Toronto, Canada
| | - Jennifer Croke
- Princess Margaret Hospital Cancer Centre, Radiation Medicine Program, Toronto, Canada; Department of Radiation Oncology, University of Toronto, Toronto, Canada
| | - Srinivas Raman
- Princess Margaret Hospital Cancer Centre, Radiation Medicine Program, Toronto, Canada; Department of Radiation Oncology, University of Toronto, Toronto, Canada.
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Zhang HW, Zhong XM, Zhang ZH, Pang HW. Dose prediction of organs at risk in patients with cervical cancer receiving brachytherapy using needle insertion based on a neural network method. BMC Cancer 2023; 23:385. [PMID: 37106444 PMCID: PMC10142517 DOI: 10.1186/s12885-023-10875-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Accepted: 04/21/2023] [Indexed: 04/29/2023] Open
Abstract
OBJECTIVE A neural network method was employed to establish a dose prediction model for organs at risk (OAR) in patients with cervical cancer receiving brachytherapy using needle insertion. METHODS A total of 218 CT-based needle-insertion brachytherapy fraction plans for loco-regionally advanced cervical cancer treatment were analyzed in 59 patients. The sub-organ of OAR was automatically generated by self-written MATLAB, and the volume of the sub-organ was read. Correlations between D2cm3 of each OAR and volume of each sub-organ-as well as high-risk clinical target volume for bladder, rectum, and sigmoid colon-were analyzed. We then established a neural network predictive model of D2cm3 of OAR using the matrix laboratory neural net. Of these plans, 70% were selected as the training set, 15% as the validation set, and 15% as the test set. The regression R value and mean squared error were subsequently used to evaluate the predictive model. RESULTS The D2cm3/D90 of each OAR was related to volume of each respective sub-organ. The R values for bladder, rectum, and sigmoid colon in the training set for the predictive model were 0.80513, 0.93421, and 0.95978, respectively. The ∆D2cm3/D90 for bladder, rectum, and sigmoid colon in all sets was 0.052 ± 0.044, 0.040 ± 0.032, and 0.041 ± 0.037, respectively. The MSE for bladder, rectum, and sigmoid colon in the training set for the predictive model was 4.779 × 10-3, 1.967 × 10-3 and 1.574 × 10-3, respectively. CONCLUSION The neural network method based on a dose-prediction model of OAR in brachytherapy using needle insertion was simple and reliable. In addition, it only addressed volumes of sub-organs to predict the dose of OAR, which we believe is worthy of further promotion and application.
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Affiliation(s)
- Huai-Wen Zhang
- Department of Radiotherapy, Jiangxi Cancer Hospital, The Second Affiliated Hospital of Nanchang Medical College, Jiangxi Clinical Research Center for Cancer, Nanchang, 330029, China
- Department of Oncology, The third people's hospital of Jingdezhen, Jingdezhen, 333000, China
| | - Xiao-Ming Zhong
- Department of Radiotherapy, Jiangxi Cancer Hospital, The Second Affiliated Hospital of Nanchang Medical College, Jiangxi Clinical Research Center for Cancer, Nanchang, 330029, China
| | - Zhen-Hua Zhang
- Department of Oncology, The Affiliated Hospital of Southwest Medical University, Luzhou, 646000, China
| | - Hao-Wen Pang
- Department of Oncology, The Affiliated Hospital of Southwest Medical University, Luzhou, 646000, China.
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Kallis K, Moore LC, Cortes KG, Brown D, Mayadev J, Moore KL, Meyers SM. Automated treatment planning framework for brachytherapy of cervical cancer using 3D dose predictions. Phys Med Biol 2023; 68:10.1088/1361-6560/acc37c. [PMID: 36898161 PMCID: PMC10101723 DOI: 10.1088/1361-6560/acc37c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2022] [Accepted: 03/10/2023] [Indexed: 03/12/2023]
Abstract
Objective. To lay the foundation for automated knowledge-based brachytherapy treatment planning using 3D dose estimations, we describe an optimization framework to convert brachytherapy dose distributions directly into dwell times (DTs).Approach. A dose rate kernelḋ(r,θ,φ)was produced by exporting 3D dose for one dwell position from the treatment planning system and normalizing by DT. By translating and rotating this kernel to each dwell position, scaling by DT and summing over all dwell positions, dose was computed (Dcalc). We used a Python-coded COBYLA optimizer to iteratively determine the DTs that minimize the mean squared error betweenDcalcand reference doseDref, computed using voxels withDref80%-120% of prescription. As validation of the optimization, we showed that the optimizer replicates clinical plans whenDref= clinical dose in 40 patients treated with tandem-and-ovoid (T&O) or tandem-and-ring (T&R) and 0-3 needles. Then we demonstrated automated planning in 10 T&O usingDref= dose predicted from a convolutional neural network developed in past work. Validation and automated plans were compared to clinical plans using mean absolute differences (MAD=1N∑n=1Nabsxn-xn') over all voxels (xn= Dose,N= #voxels) and DTs (xn= DT,N= #dwell positions), mean differences (MD) in organD2ccand high-risk CTV D90 over all patients (where positive indicates higher clinical dose), and mean Dice similarity coefficients (DSC) for 100% isodose contours.Main results. Validation plans agreed well with clinical plans (MADdose= 1.1%, MADDT= 4 s or 0.8% of total plan time,D2ccMD = -0.2% to 0.2% and D90 MD = -0.6%, DSC = 0.99). For automated plans, MADdose= 6.5% and MADDT= 10.3 s (2.1%). The slightly higher clinical metrics in automated plans (D2ccMD = -3.8% to 1.3% and D90 MD = -5.1%) were due to higher neural network dose predictions. The overall shape of the automated dose distributions were similar to clinical doses (DSC = 0.91).Significance. Automated planning with 3D dose predictions could provide significant time savings and standardize treatment planning across practitioners, regardless of experience.
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Affiliation(s)
- Karoline Kallis
- Department of Radiation Medicine and Applied Sciences, University of California, San Diego, La Jolla, CA, United States of America
| | - Lance C Moore
- Department of Radiation Medicine and Applied Sciences, University of California, San Diego, La Jolla, CA, United States of America
| | - Katherina G Cortes
- Department of Radiation Medicine and Applied Sciences, University of California, San Diego, La Jolla, CA, United States of America
| | - Derek Brown
- Department of Radiation Medicine and Applied Sciences, University of California, San Diego, La Jolla, CA, United States of America
| | - Jyoti Mayadev
- Department of Radiation Medicine and Applied Sciences, University of California, San Diego, La Jolla, CA, United States of America
| | - Kevin L Moore
- Department of Radiation Medicine and Applied Sciences, University of California, San Diego, La Jolla, CA, United States of America
| | - Sandra M Meyers
- Department of Radiation Medicine and Applied Sciences, University of California, San Diego, La Jolla, CA, United States of America
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Multi-center dosimetric predictions to improve plan quality for brachytherapy for cervical cancer treatment. Radiother Oncol 2023; 182:109518. [PMID: 36736588 DOI: 10.1016/j.radonc.2023.109518] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2022] [Revised: 01/26/2023] [Accepted: 01/27/2023] [Indexed: 02/05/2023]
Abstract
BACKGROUND AND PURPOSE Image-guided adaptive brachytherapy (IGABT) is an important modality in the cervical cancer treatment, and plan quality is sensitive to time pressure in the workflow. Patient anatomy-based quality-assurance (QA) with overlap volume histograms (OVHs) has been demonstrated to detect suboptimal plans (outliers). This analysis quantifies the possible improvement of plans detected as outliers, and investigates its suitability as a clinical QA tool in a multi-center setting. MATERIALS AND METHODS In previous work OVH-based models were investigated for the use of QA. In this work a total of 160 plans of 68 patients treated in accordance with the current state-of-the-art IGABT protocol from Erasmus MC (EMC) were analyzed, with a model based on 120 plans (60 patients) from UMC Utrecht (UMCU). Machine-learning models were trained to define QA thresholds, and to predict dose D2cm3 to bladder, rectum, sigmoid and small bowel with the help of OVHs of the EMC cohort. Plans out of set thresholds (outliers) were investigated and retrospectively replanned based on predicted D2cm3 values. RESULTS Analysis of replanned plans demonstrated a median improvement of 0.62 Gy for all Organs At Risk (OARs) combined and an improvement for 96 % of all replanned plans. Outlier status was resolved for 36 % of the replanned plans. The majority of the plans that could not be replanned were reported having implantation complications or insufficient coverage due to tumor geometry. CONCLUSION OVH-based QA models can detect suboptimal plans, including both unproblematic BT applications and suboptimal planning circumstances in general. OVH-based QA models demonstrate potential for clinical use in terms of performance and user-friendliness, and could be used for knowledge transfer between institutes. Further research is necessary to differentiate between (sub)optimal planning circumstances.
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An Improved Image Classification Method for Cervical Precancerous Lesions Based on ShuffleNet. COMPUTATIONAL INTELLIGENCE AND NEUROSCIENCE 2022; 2022:9675628. [PMID: 36148422 PMCID: PMC9489397 DOI: 10.1155/2022/9675628] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/27/2022] [Revised: 07/08/2022] [Accepted: 07/16/2022] [Indexed: 11/17/2022]
Abstract
With the rapid development of deep learning, automatic lesion detection is used widely in clinical screening. To solve the problem that existing deep learning-based cervical precancerous lesion detection algorithms cannot meet high classification accuracy and fast running speed at the same time, a ShuffleNet-based cervical precancerous lesion classification method is proposed. By adding channel attention to the ShuffleNet, the network performance is improved. In this study, the image dataset is classified into five categories: normal, cervical cancer, LSIL (CIN1), HSIL (CIN2/CIN3), and cervical neoplasm. The colposcopy images are expanded to solve the problems of the lack of colposcopy images and the uneven distribution of images from each category. For the test dataset, the accuracy of the proposed CNN models is 81.23% and 81.38%. Our classifier achieved an AUC score of 0.99. The experimental results show that the colposcopy image classification network based on artificial intelligence has good performance in classification accuracy and model size, and it has high clinical applicability.
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Li Z, Chen K, Yang Z, Zhu Q, Yang X, Li Z, Fu J. A personalized DVH prediction model for HDR brachytherapy in cervical cancer treatment. Front Oncol 2022; 12:967436. [PMID: 36110960 PMCID: PMC9468814 DOI: 10.3389/fonc.2022.967436] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2022] [Accepted: 08/02/2022] [Indexed: 11/21/2022] Open
Abstract
Purpose Although the knowledge-based dose-volume histogram (DVH) prediction has been largely researched and applied in External Beam Radiation Therapy, it is still less investigated in the domain of brachytherapy. The purpose of this study is to develop a reliable DVH prediction method for high-dose-rate brachytherapy plans. Method A DVH prediction workflow combining kernel density estimation (KDE), k-nearest neighbor (kNN), and principal component analysis (PCA) was proposed. PCA and kNN were first employed together to select similar patients based on principal component directions. 79 cervical cancer patients with different applicators inserted was included in this study. The KDE model was built based on the relationship between distance-to-target (DTH) and the dose in selected cases, which can be subsequently used to estimate the dose probability distribution in the validation set. Model performance of bladder and rectum was quantified by |ΔD2cc|, |ΔD1cc|, |ΔD0.1cc|, |ΔDmax|, and |ΔDmean| in the form of mean and standard deviation. The model performance between KDE only and the combination of kNN, PCA, and KDE was compared. Result 20, 30 patients were selected for rectum and bladder based on KNN and PCA, respectively. The absolute residual between the actual plans and the predicted plans were 0.38 ± 0.29, 0.4 ± 0.32, 0.43 ± 0.36, 0.97 ± 0.66, and 0.13 ± 0.99 for |ΔD2cc|, |ΔD1cc|, |ΔD0.1cc|, |ΔDmax|, and |ΔDmean| in the bladder, respectively. For rectum, the corresponding results were 0.34 ± 0.27, 0.38 ± 0.33, 0.63 ± 0.57, 1.41 ± 0.99 and 0.23 ± 0.17, respectively. The combination of kNN, PCA, and KDE showed a significantly better prediction performance than KDE only, with an improvement of 30.3% for the bladder and 33.3% for the rectum. Conclusion In this study, a knowledge-based machine learning model was proposed and verified to accurately predict the DVH for new patients. This model is proved to be effective in our testing group in the workflow of HDR brachytherapy.
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Affiliation(s)
- Zhen Li
- Shanghai Jiao Tong University Affiliated Sixth People's Hospital, Shanghai, China
| | - Kehui Chen
- Shuguang Hospital Affiliated to Shanghai University of Traditional Chinese Medicine, Shanghai, China
| | | | - Qingyuan Zhu
- Shanghai Jiao Tong University Affiliated Sixth People's Hospital, Shanghai, China
| | - Xiaojing Yang
- Shanghai Jiao Tong University Affiliated Sixth People's Hospital, Shanghai, China
| | - Zhaobin Li
- Shanghai Jiao Tong University Affiliated Sixth People's Hospital, Shanghai, China
| | - Jie Fu
- Shanghai Jiao Tong University Affiliated Sixth People's Hospital, Shanghai, China
- *Correspondence: Jie Fu,
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Knowledge-based three-dimensional dose prediction for tandem-and-ovoid brachytherapy. Brachytherapy 2022; 21:532-542. [PMID: 35562285 DOI: 10.1016/j.brachy.2022.03.002] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2021] [Revised: 02/28/2022] [Accepted: 03/12/2022] [Indexed: 11/21/2022]
Abstract
PURPOSE The purpose of this work was to develop a knowledge-based dose prediction system using a convolution neural network (CNN) for cervical brachytherapy treatments with a tandem-and-ovoid applicator. METHODS A 3D U-NET CNN was utilized to make voxel-wise dose predictions based on organ-at-risk (OAR), high-risk clinical target volume (HRCTV), and possible source location geometry. The model comprised 395 previously treated cases: training (273), validation (61), test (61). To assess voxel prediction accuracy, we evaluated dose differences in all cohorts across the dose range of 20-130% of prescription, mean(SD) and standard deviation (σ), as well as isodose dice similarity coefficients for clinical and/or predicted dose distributions. We examined discrete Dose-Volume Histogram(DVH) metrics utilized for brachytherapy plan quality assessment (HRCTV D90%, and bladder and/or rectum and/or sigmoid D2cc) with ΔDx=Dx,actual-Dx,predicted Pearson correlation coefficient, standard deviation, and mean further quantifying model performance. RESULTS Ranges of voxel-wise dose difference accuracy (δD¯±σ) for 20-130% dose interval in training (test) sets ranged from [-0.5% ± 2.0% to +2.0% ± 14.0%] ([-0.1% ± 4.0% to +4.0% ± 26.0%]) in all voxels, [-1.7% ± 5.1% to -3.5% ± 12.8%] ([-2.9% ± 4.8% to -2.6% ± 18.9%]) in HRCTV, [-0.02% ± 2.40% to +3.2% ± 12.0%] ([-2.5% ± 3.6% to +0.8% ± 12.7%]) in bladder, [-0.7% ± 2.4% to +15.5% ± 11.0%] ([-0.9% ± 3.2% to +27.8% ± 11.6%]) in rectum, and [-0.7% ± 2.3% to +10.7% ± 15.0%] ([-0.4% ± 3.0% to +18.4% ± 11.4%]) in sigmoid. Isodose dice similarity coefficients ranged from [0.96,0.91] for training and [0.94,0.87] for test cohorts. Relative DVH metric prediction in the training (test) set were HRCTV ΔD¯90±σΔD=-0.19 ± 0.55Gy(-0.09 ± 0.67 Gy), bladder ΔD¯2cc±σΔD= -0.06 ± 0.54Gy(-0.17 ± 0.67 Gy), rectum ΔD¯2cc±σΔD= -0.03 ± 0.36Gy(-0.04 ± 0.46 Gy), and sigmoid ΔD¯2cc±σΔD= -0.01 ± 0.34Gy(0.00 ± 0.44 Gy). CONCLUSIONS A 3D knowledge-based dose predictions provide voxel-level and DVH metric estimates that could be used for treatment plan quality control and data-driven plan guidance.
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Subarna T, Sukumar P. Detection and classification of cervical cancer images using CEENET deep learning approach. JOURNAL OF INTELLIGENT & FUZZY SYSTEMS 2022. [DOI: 10.3233/jifs-220173] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Earlier detection of cervical cancer in women can save their lives before a chronic development. The accurate detection in cancer tissues of cervix in the human body is very important. In this article, cervical images were classified into either affected or healthy images using deep learning architecture. The proposed approach was designed with the modules of Edge detector, complex wavelet transform, feature derivation and Convolutional Neural Networks (CNN) architecture with segmentation. The edge pixels in the source cervical image were detected using Kirsch’s edge detector, the Complex Wavelet Transform (CWT) was there used to decompose the edge detected cervical images into number of sub bands. Local Derivative Pattern (LDP) and statistical features were computed from the decomposed sub bands and feature map was constructed using the computed features. The featured map along with the source cervical image was fed into the Cervical Ensemble Network (CEENET) model for classifying of cervical images into the classes healthy or cancer (affected).
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Affiliation(s)
- T.G. Subarna
- Department of Electronics and Communication Engineering, Nanadha Engineering College, Erode, Tamilnadu, India
| | - P. Sukumar
- Department of Electronics and Communication Engineering, Nanadha Engineering College, Erode, Tamilnadu, India
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Reijtenbagh D, Godart J, de Leeuw A, Seppenwoolde Y, Jürgenliemk-Schulz I, Mens J, Nout R, Hoogeman M. Multi-center analysis of machine-learning predicted dose parameters in brachytherapy for cervical cancer. Radiother Oncol 2022; 170:169-175. [DOI: 10.1016/j.radonc.2022.02.022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2021] [Revised: 02/14/2022] [Accepted: 02/16/2022] [Indexed: 11/30/2022]
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Pu G, Jiang S, Yang Z, Hu Y, Liu Z. Deep reinforcement learning for treatment planning in high-dose-rate cervical brachytherapy. Phys Med 2021; 94:1-7. [PMID: 34959169 DOI: 10.1016/j.ejmp.2021.12.009] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/16/2021] [Revised: 11/16/2021] [Accepted: 12/16/2021] [Indexed: 02/07/2023] Open
Abstract
PURPOSE High-dose-rate (HDR) brachytherapy (BT) is an effective cancer treatment method in which the radiation source is placed within the body. Treatment planning is a critical component for a successful outcome. Almost all currently proposed treatment planning methods are built on stochastic heuristic algorithms, which limits the generation of higher quality plans. This study proposed a novel treatment planning method to adjust dwell times in a human-like fashion to improve the quality of the plan. METHODS We built an intelligent treatment planner network (ITPN) based on deep reinforcement learning (DRL). The network architecture of ITPN is Dueling Double-Deep Q Network. The state is the dwell time of each dwell position and the action is which dwell time to adjust and how to adjust it. A hybrid equivalent uniform dose objective function was established and assigned corresponding rewards according to its changes. Experience replay was performed with the epsilon greedy algorithm and SumTree data structure. RESULTS In the evaluation of ITPN using 20 patient cases, D90, D100 and V100 showed no significant difference compared with inverse planning simulated annealing (IPSA) optimization. However, D2cc of bladder, rectum and sigmoid, V150 and V200 were significant reduced, and homogeneity index and conformity index were significantly increased. CONCLUSION The proposed ITPN was able to generate higher quality plans based on the learned dwell time adjustment policy than IPSA. This is the first artificial intelligence system that can directly determine the dwell times of HDR BT, which demonstrated the potential feasibility of solving optimization problems via DRL.
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Affiliation(s)
- Gang Pu
- School of Mechanical Engineering, Tianjin University, Tianjin 300350, China.
| | - Shan Jiang
- School of Mechanical Engineering, Tianjin University, Tianjin 300350, China.
| | - Zhiyong Yang
- School of Mechanical Engineering, Tianjin University, Tianjin 300350, China.
| | - Yuanjing Hu
- Department of Gynecologic Oncology, Tianjin Central Hospital of Genecology and Obstetrics & Affiliated Hospital of Nankai University, Tianjin 300199, China
| | - Ziqi Liu
- School of Mechanical Engineering, Tianjin University, Tianjin 300350, China
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Kallis K, Mayadev J, Kisling K, Brown D, Scanderbeg D, Ray X, Cortes K, Simon A, Yashar CM, Einck JP, Mell LK, Moore KL, Meyers SM. Knowledge-based dose prediction models to inform gynecologic brachytherapy needle supplementation for locally advanced cervical cancer. Brachytherapy 2021; 20:1187-1199. [PMID: 34393059 DOI: 10.1016/j.brachy.2021.07.001] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2021] [Revised: 06/16/2021] [Accepted: 07/01/2021] [Indexed: 10/20/2022]
Abstract
PURPOSE The use of interstitial needles, combined with intracavitary applicators, enables customized dose distributions and is beneficial for complex cases, but increases procedure time. Overall, applicator selection is not standardized and depends on physician expertise and preference. The purpose of this study is to determine whether dose prediction models can guide needle supplementation decision-making for cervical cancer. MATERIALS AND METHODS Intracavitary knowledge-based models for organ-at-risk (OAR) dose estimation were trained and validated for tandem-and-ring/ovoids (T&R/T&O) implants. Models were applied to hybrid cases with 1-3 implanted needles to predict OAR dose without needles. As a reference, 70/67 hybrid T&R/T&O cases were replanned without needles, following a standardized procedure guided by dose predictions. If a replanned dose exceeded the dose objective, the case was categorized as requiring needles. Receiver operating characteristic (ROC) curves of needle classification accuracy were generated. Optimal classification thresholds were determined from the Youden Index. RESULTS Needle supplementation reduced dose to OARs. However, 67%/39% of replans for T&R/T&O met all dose constraints without needles. The ROC for T&R/T&O models had an area-under-curve of 0.89/0.86, proving high classification accuracy. The optimal threshold of 99%/101% of the dose limit for T&R/T&O resulted in classification sensitivity and specificity of 78%/86% and 85%/78%. CONCLUSIONS Needle supplementation reduced OAR dose for most cases but was not always required to meet standard dose objectives, particularly for T&R cases. Our knowledge-based dose prediction model accurately identified cases that could have met constraints without needle supplementation, suggesting that such models may be beneficial for applicator selection.
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Affiliation(s)
- Karoline Kallis
- Department of Radiation Medicine & Applied Sciences, UC San Diego Health, San Diego, CA
| | - Jyoti Mayadev
- Department of Radiation Medicine & Applied Sciences, UC San Diego Health, San Diego, CA
| | - Kelly Kisling
- Department of Radiation Medicine & Applied Sciences, UC San Diego Health, San Diego, CA
| | - Derek Brown
- Department of Radiation Medicine & Applied Sciences, UC San Diego Health, San Diego, CA
| | - Daniel Scanderbeg
- Department of Radiation Medicine & Applied Sciences, UC San Diego Health, San Diego, CA
| | - Xenia Ray
- Department of Radiation Medicine & Applied Sciences, UC San Diego Health, San Diego, CA
| | - Katherina Cortes
- Department of Radiation Medicine & Applied Sciences, UC San Diego Health, San Diego, CA
| | - Aaron Simon
- Department of Radiation Medicine & Applied Sciences, UC San Diego Health, San Diego, CA
| | - Catheryn M Yashar
- Department of Radiation Medicine & Applied Sciences, UC San Diego Health, San Diego, CA
| | - John P Einck
- Department of Radiation Medicine & Applied Sciences, UC San Diego Health, San Diego, CA
| | - Loren K Mell
- Department of Radiation Medicine & Applied Sciences, UC San Diego Health, San Diego, CA
| | - Kevin L Moore
- Department of Radiation Medicine & Applied Sciences, UC San Diego Health, San Diego, CA
| | - Sandra M Meyers
- Department of Radiation Medicine & Applied Sciences, UC San Diego Health, San Diego, CA.
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Kallis K, Mayadev J, Covele B, Brown D, Scanderbeg D, Simon A, Frisbie-Firsching H, Yashar CM, Einck JP, Mell LK, Moore KL, Meyers SM. Evaluation of dose differences between intracavitary applicators for cervical brachytherapy using knowledge-based models. Brachytherapy 2021; 20:1323-1333. [PMID: 34607771 DOI: 10.1016/j.brachy.2021.08.010] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2021] [Revised: 08/12/2021] [Accepted: 08/14/2021] [Indexed: 10/20/2022]
Abstract
PURPOSE Currently, there is a lack of patient-specific tools to guide brachytherapy planning and applicator choice for cervical cancer. The purpose of this study is to evaluate the accuracy of organ-at-risk (OAR) dose predictions using knowledge-based intracavitary models, and the use of these models and clinical data to determine the dosimetric differences of tandem-and-ring (T&R) and tandem-and-ovoids (T&O) applicators. MATERIALS AND METHODS Knowledge-based models, which predict organ D2cc, were trained on 77/75 cases and validated on 32/38 for T&R/T&O applicators. Model performance was quantified using ΔD2cc=D2cc,actual-D2cc,predicted, with standard deviation (σ(ΔD2cc)) representing precision. Model-predicted applicator dose differences were determined by applying T&O models to T&R cases, and vice versa, and compared to clinically-achieved D2cc differences. Applicator differences were assessed using a Student's t-test (p < 0.05 significant). RESULTS Validation T&O/T&R model precision was 0.65/0.55 Gy, 0.55/0.38 Gy, and 0.43/0.60 Gy for bladder, rectum and sigmoid, respectively, and similar to training. When applying T&O/T&R models to T&R/T&O cases, bladder, rectum and sigmoid D2cc values in EQD2 were on average 5.69/2.62 Gy, 7.31/6.15 Gy and 3.65/0.69 Gy lower for T&R, with similar HRCTV volume and coverage. Clinical data also showed lower T&R OAR doses, with mean EQD2 D2cc deviations of 0.61 Gy, 7.96 Gy (p < 0.01) and 5.86 Gy (p < 0.01) for bladder, rectum and sigmoid. CONCLUSIONS Accurate knowledge-based dose prediction models were developed for two common intracavitary applicators. These models could be beneficial for standardizing and improving the quality of brachytherapy plans. Both models and clinical data suggest that significant OAR sparing can be achieved with T&R over T&O applicators, particularly for the rectum.
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Affiliation(s)
- Karoline Kallis
- Department of Radiation Medicine and Applied Sciences, University of California San Diego, San Diego, CA
| | - Jyoti Mayadev
- Department of Radiation Medicine and Applied Sciences, University of California San Diego, San Diego, CA
| | - Brent Covele
- Department of Radiation Medicine and Applied Sciences, University of California San Diego, San Diego, CA
| | - Derek Brown
- Department of Radiation Medicine and Applied Sciences, University of California San Diego, San Diego, CA
| | - Daniel Scanderbeg
- Department of Radiation Medicine and Applied Sciences, University of California San Diego, San Diego, CA
| | - Aaron Simon
- Department of Radiation Medicine and Applied Sciences, University of California San Diego, San Diego, CA
| | - Helena Frisbie-Firsching
- Department of Radiation Medicine and Applied Sciences, University of California San Diego, San Diego, CA
| | - Catheryn M Yashar
- Department of Radiation Medicine and Applied Sciences, University of California San Diego, San Diego, CA
| | - John P Einck
- Department of Radiation Medicine and Applied Sciences, University of California San Diego, San Diego, CA
| | - Loren K Mell
- Department of Radiation Medicine and Applied Sciences, University of California San Diego, San Diego, CA
| | - Kevin L Moore
- Department of Radiation Medicine and Applied Sciences, University of California San Diego, San Diego, CA
| | - Sandra M Meyers
- Department of Radiation Medicine and Applied Sciences, University of California San Diego, San Diego, CA.
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Covele BM, Puri KS, Kallis K, Murphy JD, Moore KL. ORBIT-RT: A Real-Time, Open Platform for Knowledge-Based Quality Control of Radiotherapy Treatment Planning. JCO Clin Cancer Inform 2021; 5:134-142. [PMID: 33513032 DOI: 10.1200/cci.20.00093] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
PURPOSE Access to knowledge-based treatment plan quality control has been hindered by the complexity of developing models and integration with different treatment planning systems (TPS). Online Real-time Benchmarking Information Technology for RadioTherapy (ORBIT-RT) provides a free, web-based platform for knowledge-based dose estimation that can be used by clinicians worldwide to benchmark the quality of their radiotherapy plans. MATERIALS AND METHODS The ORBIT-RT platform was developed to satisfy four primary design criteria: web-based access, TPS independence, Health Insurance Portability and Accountability Act compliance, and autonomous operation. ORBIT-RT uses a cloud-based server to automatically anonymize a user's Digital Imaging and Communications in Medicine for RadioTherapy (DICOM-RT) file before upload and processing of the case. From there, ORBIT-RT uses established knowledge-based dose-volume histogram (DVH) estimation methods to autonomously create DVH estimations for the uploaded DICOM-RT. ORBIT-RT performance was evaluated with an independent validation set of 45 volumetric modulated arc therapy prostate plans with two key metrics: (i) accuracy of the DVH estimations, as quantified by their error, DVHclinical - DVHprediction and (ii) time to process and display the DVH estimations on the ORBIT-RT platform. RESULTS ORBIT-RT organ DVH predictions show < 1% bias and 3% error uncertainty at doses > 80% of prescription for the prostate validation set. The ORBIT-RT extensions require 3.0 seconds per organ to analyze. The DICOM upload, data transfer, and DVH output display extend the entire system workflow to 2.5-3 minutes. CONCLUSION ORBIT-RT demonstrated fast and fully autonomous knowledge-based feedback on a web-based platform that takes only anonymized DICOM-RT as input. The ORBIT-RT system can be used for real-time quality control feedback that provides users with objective comparisons for final plan DVHs.
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Zhou P, Li X, Zhou H, Fu X, Liu B, Zhang Y, Lin S, Pang H. Support Vector Machine Model Predicts Dose for Organs at Risk in High-Dose Rate Brachytherapy of Cervical Cancer. Front Oncol 2021; 11:619384. [PMID: 34336640 PMCID: PMC8319952 DOI: 10.3389/fonc.2021.619384] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2020] [Accepted: 06/25/2021] [Indexed: 11/13/2022] Open
Abstract
Introduction This study aimed to establish a support vector machine (SVM) model to predict the dose for organs at risk (OARs) in intracavitary brachytherapy planning for cervical cancer with tandem and ovoid treatments. Methods Fifty patients with loco-regionally advanced cervical cancer treated with 200 CT-based tandem and ovoid brachytherapy plans were included. The brachytherapy plans were randomly divided into the training (N = 160) and verification groups (N = 40). The bladder, rectum, sigmoid colon, and small intestine were divided into sub-OARs. The SVM model was established using MATLAB software based on the sub-OAR volume to predict the bladder, rectum, sigmoid colon, and small intestine D 2 c m 3 . Model performance was quantified by mean squared error (MSE) and δ ( δ = | D 2 c m 3 / D prescription ( actual ) - D 2 c m 3 / D prescription ( predicted ) | ) . The goodness of fit of the model was quantified by the coefficient of determination (R2). The accuracy and validity of the SVM model were verified using the validation group. Results The D 2 c m 3 value of the bladder, rectum, sigmoid colon, and small intestine correlated with the volume of the corresponding sub-OARs in the training group. The mean squared error (MSE) in the SVM model training group was <0.05; the R2 of each OAR was >0.9. There was no significant difference between the D 2 c m 3 -predicted and actual values in the validation group (all P > 0.05): bladder δ = 0.024 ± 0.022, rectum δ = 0.026 ± 0.014, sigmoid colon δ = 0.035 ± 0.023, and small intestine δ = 0.032 ± 0.025. Conclusion The SVM model established in this study can effectively predict the D 2 c m 3 for the bladder, rectum, sigmoid colon, and small intestine in cervical cancer brachytherapy.
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Affiliation(s)
- Ping Zhou
- Department of Radiology, The Affiliated Hospital of Southwest Medical University, Luzhou, China
| | - Xiaojie Li
- Department of Oncology, The Affiliated Hospital of Southwest Medical University, Luzhou, China
| | - Hao Zhou
- Department of Nursing College, Southwest Medical University, Luzhou, China
| | - Xiao Fu
- Department of Nursing College, Southwest Medical University, Luzhou, China
| | - Bo Liu
- Department of Nursing College, Southwest Medical University, Luzhou, China
| | - Yu Zhang
- Department of Nursing College, Southwest Medical University, Luzhou, China
| | - Sheng Lin
- Department of Oncology, The Affiliated Hospital of Southwest Medical University, Luzhou, China
| | - Haowen Pang
- Department of Oncology, The Affiliated Hospital of Southwest Medical University, Luzhou, China
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Chandran V, Sumithra MG, Karthick A, George T, Deivakani M, Elakkiya B, Subramaniam U, Manoharan S. Diagnosis of Cervical Cancer based on Ensemble Deep Learning Network using Colposcopy Images. BIOMED RESEARCH INTERNATIONAL 2021; 2021:5584004. [PMID: 33997017 PMCID: PMC8112909 DOI: 10.1155/2021/5584004] [Citation(s) in RCA: 38] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/05/2021] [Revised: 03/31/2021] [Accepted: 04/20/2021] [Indexed: 12/17/2022]
Abstract
Traditional screening of cervical cancer type classification majorly depends on the pathologist's experience, which also has less accuracy. Colposcopy is a critical component of cervical cancer prevention. In conjunction with precancer screening and treatment, colposcopy has played an essential role in lowering the incidence and mortality from cervical cancer over the last 50 years. However, due to the increase in workload, vision screening causes misdiagnosis and low diagnostic efficiency. Medical image processing using the convolutional neural network (CNN) model shows its superiority for the classification of cervical cancer type in the field of deep learning. This paper proposes two deep learning CNN architectures to detect cervical cancer using the colposcopy images; one is the VGG19 (TL) model, and the other is CYENET. In the CNN architecture, VGG19 is adopted as a transfer learning for the studies. A new model is developed and termed as the Colposcopy Ensemble Network (CYENET) to classify cervical cancers from colposcopy images automatically. The accuracy, specificity, and sensitivity are estimated for the developed model. The classification accuracy for VGG19 was 73.3%. Relatively satisfied results are obtained for VGG19 (TL). From the kappa score of the VGG19 model, we can interpret that it comes under the category of moderate classification. The experimental results show that the proposed CYENET exhibited high sensitivity, specificity, and kappa scores of 92.4%, 96.2%, and 88%, respectively. The classification accuracy of the CYENET model is improved as 92.3%, which is 19% higher than the VGG19 (TL) model.
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Affiliation(s)
- Venkatesan Chandran
- Department of Electronics and Communication Engineering, KPR Institute of Engineering and Technology, Avinashi road, Coimbatore, 641407 Tamilnadu, India
| | - M. G. Sumithra
- Department of Electronics and Communication Engineering, KPR Institute of Engineering and Technology, Avinashi road, Coimbatore, 641407 Tamilnadu, India
| | - Alagar Karthick
- Renewable Energy Lab, Department of Electrical and Electronics Engineering, KPR Institute of Engineering and Technology, Avinashi road, Coimbatore, 641407 Tamilnadu, India
| | - Tony George
- Department of Electrical and Electronics Engineering, Adi Shankara Institute of Engineering and Technology Mattoor, Kalady, Kerala 683574, India
| | - M. Deivakani
- Department of Electronics and Communication Engineering, PSNA College of Engineering and Technology, Dindigul, 624622 Tamilnadu, India
| | - Balan Elakkiya
- Department of Electronics and Communication Engineering, Vel Tech High Tech Dr. Rangarajan Dr. Sakunthala Engineering College, Tamilnadu 600062, India
| | - Umashankar Subramaniam
- Department of Communications and Networks, Renewable Energy Lab, College of Engineering, Prince, Sultan University, Riyadh 12435, Saudi Arabia
| | - S. Manoharan
- Department of Computer Science, School of Informatics and Electrical Engineering, Institute of Technology, Ambo University, Ambo, Post Box No. 19, Ethiopia
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22
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Guthier CV, Orio PF, Buzurovic I, Cormack RA. Knowledge-based inverse treatment planning for low-dose-rate prostate brachytherapy. Med Phys 2021; 48:2108-2117. [PMID: 33586191 DOI: 10.1002/mp.14775] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2020] [Revised: 01/17/2021] [Accepted: 02/04/2021] [Indexed: 12/25/2022] Open
Abstract
PURPOSE Permanent low-dose-rate brachytherapy is a widely used treatment modality for managing prostate cancer. In such interventions, treatment planning can be a challenging task and requires experience and skills of the planner. We developed a novel knowledge-based (KB) optimization method based on previous treatment plans. The purpose of this method was to generate clinically acceptable plans that do not require extensive manual adjustments in clinical scenarios. METHODS Objective functions used in current inverse planning methods are preferably based on spatial invariant dose objectives rather than spatial dose distributions. Therefore, they are prone to return suboptimal plans resulting in time consuming plan adjustments. To overcome this limitation, a KB approach is introduced. The KB model uses the dose distributions of previous clinical plans projected onto a standardized geometry. From those standardized distributions a template plan is generated. The treatment plans were optimized with an in-house developed planning system by solving a constraint inverse optimization problem that mimics the projected template dose plan constraint to DVH metrics. The method is benchmarked under an IRB-approved retrospective study by comparing optimization time, dosimetric performance, and clinical acceptability against current clinical practice. The quality of the KB model is evaluated with a Turing test. RESULTS The KB model consists of five high-quality treatment plans. Those plans were selected by one of our experts and showed all desired dosimetric features. After generating the model treatment plans were created with one run of the optimizer for the remaining 20 patients. The optimization time including needle optimization ranged from 6 to 29 s. Based on a Wilcoxon signed rank test the new plans are dosimetrically equivalent to current clinical practice. The Turing test showed that the proposed method generates plans that are equivalent to current clinical practice and that the dose prediction drives the optimization to achieve high-quality treatment plans. CONCLUSIONS This study demonstrated that the proposed KB model was able to capture user-specific features in isodose lines which can be used to generate acceptable treatment plans with a single run of the optimization engine in under a minute. This could potentially reduce the time in the operating room and the time a patient is under anesthesia.
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Affiliation(s)
- Christian V Guthier
- Department of Radiation Oncology, Brigham and Women's Hospital and Dana-Farber Cancer Institute, and Harvard Medical School, Boston, MA, USA
| | - Peter F Orio
- Department of Radiation Oncology, Brigham and Women's Hospital and Dana-Farber Cancer Institute, and Harvard Medical School, Boston, MA, USA
| | - Ivan Buzurovic
- Department of Radiation Oncology, Brigham and Women's Hospital and Dana-Farber Cancer Institute, and Harvard Medical School, Boston, MA, USA
| | - Robert A Cormack
- Department of Radiation Oncology, Brigham and Women's Hospital and Dana-Farber Cancer Institute, and Harvard Medical School, Boston, MA, USA
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