1
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Jäck N, Hemming A, Hartmann L. Synthesis of Dual-Responsive Amphiphilic Glycomacromolecules: Controlled Release of Glycan Ligands via pH and UV Stimuli. Macromol Rapid Commun 2024:e2400439. [PMID: 39037337 DOI: 10.1002/marc.202400439] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2024] [Revised: 06/25/2024] [Indexed: 07/23/2024]
Abstract
This work presents a versatile strategy for the synthesis of dual stimuli-responsive amphiphilic glycomacromolecules with tailored release properties. Amphiphilic precision glycomacromolecules (APGs) derived from tailor-made building blocks using solid phase polymer synthesis form glycofunctionalized micelles, a versatile class of materials with applications in drug delivery, as antiinfection agents as well as simple cell mimetics. In this work, this concept is extended by integrating cleavable building blocks into APGs now allowing stimuli-responsive release of glycan ligands or destruction of the micelles. This study incorporates a newly designed acid-labile building block, 4-(4-(((((9H-fluoren-9-yl)methoxy)carbonyl)amino)methyl)-1,3-dioxolan-2-yl)benzoic acid (DBA), suitable also for other types of solid phase or amide chemistry, and an established UV-cleavable 2-nitrobenzyl linker (PL). The results demonstrate that both linkers can be cleaved independently and thus allow dual stimuli-responsive release from the APG micelles. By choosing the APG design e.g., placing the cleavable linkers between glycomacromolecular blocks presenting different types of carbohydrates, they can tune APG and micellar stability as well as the interaction and cluster formation with a carbohydrate-recognizing lectin. Such dual-responsive glycofunctionalized micelles have wide potential for use in drug delivery applications or for the development as anti-adhesion agents in antiviral and antibacterial treatments.
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Affiliation(s)
- Nicholas Jäck
- Institute of Macromolecular Chemistry, Albert-Ludwigs-Universität Freiburg, Stefan-Meier-Str. 31, 79104, Freiburg, Germany
- Institute of Organic Chemistry and Macromolecular Chemistry, Heinrich-Heine-Universität Düsseldorf, Universitätsstr. 1, 40225, Düsseldorf, Germany
- Cluster of Excellence livMatS @ FIT - Freiburg Center for Interactive Materials and Bioinspired Technologies, University of Freiburg, Georges-Köhler-Allee 105, D-79110, Freiburg, Germany
| | - Arne Hemming
- Institute of Organic Chemistry and Macromolecular Chemistry, Heinrich-Heine-Universität Düsseldorf, Universitätsstr. 1, 40225, Düsseldorf, Germany
| | - Laura Hartmann
- Institute of Macromolecular Chemistry, Albert-Ludwigs-Universität Freiburg, Stefan-Meier-Str. 31, 79104, Freiburg, Germany
- Cluster of Excellence livMatS @ FIT - Freiburg Center for Interactive Materials and Bioinspired Technologies, University of Freiburg, Georges-Köhler-Allee 105, D-79110, Freiburg, Germany
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2
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Wang C, Shen S, Li Y, Pan H, Zhou Z, Li J, Wu B, Jing S, Guo C, Fan J, Guo H. The influence of the size of aromatic monomers on the structure and catalytic activity of polymer solid acids. NEW J CHEM 2022. [DOI: 10.1039/d1nj02596a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
High activity hyper-crosslinked polymer solid acids (HCPSAs) were prepared from different aromatic monomers, and the structure was regulated by selecting the type and size of aromatic monomers.
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Affiliation(s)
- Cui Wang
- College of Chemistry and Chemical Engineering, Taiyuan University of Technology, Taiyuan, 030024, China
| | - Shuguang Shen
- College of Chemistry and Chemical Engineering, Taiyuan University of Technology, Taiyuan, 030024, China
| | - Yehui Li
- College of Chemistry and Chemical Engineering, Taiyuan University of Technology, Taiyuan, 030024, China
| | - Huajie Pan
- College of Chemistry and Chemical Engineering, Taiyuan University of Technology, Taiyuan, 030024, China
| | - Zijian Zhou
- College of Chemistry and Chemical Engineering, Taiyuan University of Technology, Taiyuan, 030024, China
| | - Jing Li
- College of Biomedical Engineering, Taiyuan University of Technology, Taiyuan, 030024, China
| | - Bin Wu
- College of Chemistry and Chemical Engineering, Taiyuan University of Technology, Taiyuan, 030024, China
| | - Shuaiqi Jing
- College of Chemistry and Chemical Engineering, Taiyuan University of Technology, Taiyuan, 030024, China
| | - Chenyuan Guo
- College of Chemistry and Chemical Engineering, Taiyuan University of Technology, Taiyuan, 030024, China
| | - Jimin Fan
- College of Chemistry and Chemical Engineering, Taiyuan University of Technology, Taiyuan, 030024, China
| | - Hongsheng Guo
- College of Chemistry and Chemical Engineering, Taiyuan University of Technology, Taiyuan, 030024, China
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3
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Lee ZY, Loo JSE, Wibowo A, Mohammat MF, Foo JB. Targeting cancer via Golgi α-mannosidase II inhibition: How far have we come in developing effective inhibitors? Carbohydr Res 2021; 508:108395. [PMID: 34280804 DOI: 10.1016/j.carres.2021.108395] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2021] [Revised: 07/01/2021] [Accepted: 07/01/2021] [Indexed: 11/22/2022]
Abstract
Dysregulation of glycosylation pathways has been well documented in several types of cancer, where it often participates in cancer development and progression, especially cancer metastasis. Hence, inhibition of glycosidases such as mannosidases can disrupt the biosynthesis of glycans on cell surface glycoproteins and modify their role in carcinogenesis and metastasis. Several reviews have delineated the role of N-glycosylation in cancer, but the data regarding effective inhibitors remains sparse. Golgi α-mannosidase has been an attractive therapeutic target for preventing the formation of ß1,6-branched complex type N-glycans. However, due to its high structural similarity to the broadly specific lysosomal α-mannosidase, undesired co-inhibition occurs and this leads to serious side effects that complicates its potential role as a therapeutic agent. Even though extensive efforts have been geared towards the discovery of effective inhibitors, no breakthrough has been achieved thus far which could allow for their use in clinical settings. Improving the specificity of current inhibitors towards Golgi α-mannosidase is requisite in progressing this class of compounds in cancer chemotherapy. In this review, we highlight a few potent and selective inhibitors discovered up to the present to guide researchers for rational design of further effective inhibitors to overcome the issue of specificity.
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Affiliation(s)
- Zheng Yang Lee
- School of Pharmacy, Faculty of Health & Medical Sciences, Taylor's University, 1, Jalan Taylors, 47500, Subang Jaya, Selangor, Malaysia
| | - Jason Siau Ee Loo
- School of Pharmacy, Faculty of Health & Medical Sciences, Taylor's University, 1, Jalan Taylors, 47500, Subang Jaya, Selangor, Malaysia; Centre for Drug Discovery and Molecular Pharmacology, Faculty of Health & Medical Sciences, Taylor's University, 1, Jalan Taylors, 47500, Subang Jaya, Selangor, Malaysia
| | - Agustono Wibowo
- Faculty of Applied Science, Universiti Teknologi MARA (UiTM) Pahang, Jengka Campus, 26400, Bandar Tun Abdul Razak Jengka, Pahang, Malaysia
| | - Mohd Fazli Mohammat
- Organic Synthesis Laboratory, Institute of Science, Universiti Teknologi MARA (UiTM), 40450, Shah Alam, Selangor, Malaysia
| | - Jhi Biau Foo
- School of Pharmacy, Faculty of Health & Medical Sciences, Taylor's University, 1, Jalan Taylors, 47500, Subang Jaya, Selangor, Malaysia; Centre for Drug Discovery and Molecular Pharmacology, Faculty of Health & Medical Sciences, Taylor's University, 1, Jalan Taylors, 47500, Subang Jaya, Selangor, Malaysia.
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4
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Yadav S, Naresh K, Jayaraman N. "Surface Density of Ligands Controls In-Plane and Aggregative Modes of Multivalent Glycovesicle-Lectin Recognitions". Chembiochem 2021; 22:3075-3081. [PMID: 34375491 DOI: 10.1002/cbic.202100321] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2021] [Revised: 08/09/2021] [Indexed: 11/09/2022]
Abstract
Glycovesicles are ideal tools to delineate finer mechanisms of the interactions at the biological cell membranes. Multivalency forms the basis which, in turn, should surpass more than one mechanism in order to maintain multiple roles that the ligand-lectin interactions encounter. Ligand densities hold a prime control to attenuate the interactions. In the present study, mannose trisaccharide interacting with a cognate receptor, namely, Con A, is assessed at the vesicle surfaces. A synthetic (1→3)(1→6)-branched mannose trisaccharide is tethered with a diacetylene monomer and glycovesicles of varying sugar densities are prepared. The polydiacetylene vesicles are prepared by maintaining uniform lipid concentrations. The interactions of the glycovesicles with the lectin are probed through dynamic light scattering and UV-Vis spectroscopy techniques. Binding efficacies are assessed by surface plasmon resonance technique. Aggregative and in-plane modes of interactions follow a ligand density-dependant manner at the vesicle surface. Vesicles with sparsely populated ligands engage lectin in an aggregative mode (trans-), leading to a cross-linked complex formation. Whereas glycovesicles imbedded with dense ligands engage lectin interaction in an in-plane mode intramolecularly (cis-). Sub-nanomolar dissociation constants govern the intramolecular interaction occurring within the plane of the vesicle, relatively more efficacious than the aggregative intermolecular interactions.
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Affiliation(s)
- Shivender Yadav
- Indian Institute of Science, Department of Organic Chemistry, INDIA
| | - Kottari Naresh
- Indian Institute of Science, Department of Organic Chemistry, INDIA
| | - Narayanaswamy Jayaraman
- Indian Institute of Science, Department of Organic Chemistry, Sir C.V. Raman Avenue, 560 012, Bangalore, INDIA
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5
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Redman RL, Krauss IJ. Directed Evolution of 2'-Fluoro-Modified, RNA-Supported Carbohydrate Clusters That Bind Tightly to HIV Antibody 2G12. J Am Chem Soc 2021; 143:8565-8571. [PMID: 34096703 DOI: 10.1021/jacs.1c03194] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Carbohydrate binding proteins (CBPs) are attractive targets in medicine and biology. Multivalency, with several glycans binding to several binding pockets in the CBP, is important for high-affinity interactions. Herein, we describe a novel platform for design of multivalent carbohydrate cluster ligands by directed evolution, in which serum-stable 2'-fluoro modified RNA (F-RNA) backbones evolve to present the glycan in optimal clusters. We have validated this method by the selection of oligomannose (Man9) glycan clusters from a sequence pool of ∼1013 that bind to broadly neutralizing HIV antibody 2G12 with 13 to 36 nM affinities.
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Affiliation(s)
- Richard L Redman
- Department of Chemistry, Brandeis University, 415 South Street MS 015, Waltham, Massachusetts 02454, United States
| | - Isaac J Krauss
- Department of Chemistry, Brandeis University, 415 South Street MS 015, Waltham, Massachusetts 02454, United States
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6
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Todorova Z, Tumurbaatar O, Todorova J, Ugrinova I, Koseva N. Phosphorus-containing star-shaped polymer conjugates for biomedical applications. Eur Polym J 2021. [DOI: 10.1016/j.eurpolymj.2020.110151] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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7
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Olson LJ, Misra SK, Ishihara M, Battaile KP, Grant OC, Sood A, Woods RJ, Kim JJP, Tiemeyer M, Ren G, Sharp JS, Dahms NM. Allosteric regulation of lysosomal enzyme recognition by the cation-independent mannose 6-phosphate receptor. Commun Biol 2020; 3:498. [PMID: 32908216 PMCID: PMC7481795 DOI: 10.1038/s42003-020-01211-w] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2020] [Accepted: 08/11/2020] [Indexed: 01/09/2023] Open
Abstract
The cation-independent mannose 6-phosphate receptor (CI-MPR, IGF2 receptor or CD222), is a multifunctional glycoprotein required for normal development. Through the receptor's ability to bind unrelated extracellular and intracellular ligands, it participates in numerous functions including protein trafficking, lysosomal biogenesis, and regulation of cell growth. Clinically, endogenous CI-MPR delivers infused recombinant enzymes to lysosomes in the treatment of lysosomal storage diseases. Although four of the 15 domains comprising CI-MPR's extracellular region bind phosphorylated glycans on lysosomal enzymes, knowledge of how CI-MPR interacts with ~60 different lysosomal enzymes is limited. Here, we show by electron microscopy and hydroxyl radical protein footprinting that the N-terminal region of CI-MPR undergoes dynamic conformational changes as a consequence of ligand binding and different pH conditions. These data, coupled with X-ray crystallography, surface plasmon resonance and molecular modeling, allow us to propose a model explaining how high-affinity carbohydrate binding is achieved through allosteric domain cooperativity.
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Affiliation(s)
- Linda J Olson
- Department of Biochemistry, Medical College of Wisconsin, Milwaukee, WI, 53226, USA.
| | - Sandeep K Misra
- Department of BioMolecular Sciences, University of Mississippi, Oxford, MS, 38677, USA
| | - Mayumi Ishihara
- Complex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA
| | - Kevin P Battaile
- IMCA-CAT, Hauptman-Woodward Medical Research Institute, Argonne, IL, USA
- New York Structural Biology Center, New York City, NY, 10027, USA
| | - Oliver C Grant
- Complex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA
| | - Amika Sood
- Complex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA
| | - Robert J Woods
- Complex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA
| | - Jung-Ja P Kim
- Department of Biochemistry, Medical College of Wisconsin, Milwaukee, WI, 53226, USA
| | - Michael Tiemeyer
- Complex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA
| | - Gang Ren
- The Molecular Foundry, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA
| | - Joshua S Sharp
- Department of BioMolecular Sciences, University of Mississippi, Oxford, MS, 38677, USA
| | - Nancy M Dahms
- Department of Biochemistry, Medical College of Wisconsin, Milwaukee, WI, 53226, USA.
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8
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Sumoto K. [Synthetic Studies on Developments for Bioactive New Leads of Oligovalent Symmetrical Molecules]. YAKUGAKU ZASSHI 2020; 140:529-541. [PMID: 32238636 DOI: 10.1248/yakushi.19-00222] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Interactions between carbohydrate-containing glycoproteins, proteoglycans, and glycolipids on the cell surface are important biological stages for the processes of bacterial or viral infection and tumor metastasis. Moreover, supramolecular interaction by macromolecules with two-fold (C2) or three-fold (C3) geometry is one of the common interactions in many important biological responses. To develop new multivalent symmetrical bioactive compounds or leads, we designed and synthesized several new molecules with these geometries and evaluated their bioactivities in an attempt to find new types of bioactive leads that may interfere with the sugar recognition process. We evaluated bioactivities including antibacterial, antiviral, and anticancer activities of targeted molecules in vitro using biological assay systems. Among the synthesized target derivatives examined, some bivalent symmetrical derivatives showed high levels of bioactivities. In this review, the author describes the results of synthesis of oligovalent symmetrical target compounds and some interesting guiding results of evaluation of their biological activities and structure-activity relationships.
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9
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Paul TJ, Strzelczyk AK, Feldhof MI, Schmidt S. Temperature-Switchable Glycopolymers and Their Conformation-Dependent Binding to Receptor Targets. Biomacromolecules 2020; 21:2913-2921. [DOI: 10.1021/acs.biomac.0c00676] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Tanja J. Paul
- Institute of Organic and Macromolecular Chemistry, Heinrich-Heine-University Düsseldorf, Universitätsstraße 1, Dusseldorf 40225, Germany
| | - Alexander K. Strzelczyk
- Institute of Organic and Macromolecular Chemistry, Heinrich-Heine-University Düsseldorf, Universitätsstraße 1, Dusseldorf 40225, Germany
| | - Melina I. Feldhof
- Institute of Organic and Macromolecular Chemistry, Heinrich-Heine-University Düsseldorf, Universitätsstraße 1, Dusseldorf 40225, Germany
| | - Stephan Schmidt
- Institute of Organic and Macromolecular Chemistry, Heinrich-Heine-University Düsseldorf, Universitätsstraße 1, Dusseldorf 40225, Germany
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10
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Furutachi M, Ota K, Fujisaki F, Ikeda R, Yoshikawa N, Yokota T, Takeda Y, Yokomizo K, Zhou JR, Kashige N, Miake F, Sumoto K. Anti-proliferative Activities of Some Bivalent Symmetrical 5-Substituted Hydantoin Derivatives towards Human Brain Glioma U251 Cells (U251) and Human Carcinoma Cells (KB3-1). Biol Pharm Bull 2020; 42:1953-1956. [PMID: 31685778 DOI: 10.1248/bpb.b19-00486] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Novel bivalent twin-drug type hydantoin derivatives were evaluated in vitro using a human brain glioma cell line (U251) and a human carcinoma cell line (KB3-1). Among the 5-substituted hydantoin derivatives (1a-b and 2a-d) examined in this study, bivalent symmetrical 5-substituted hydantoin derivative 1b showed the highest anti-proliferative activity towards both U251 and KB3-1 cells. The values of anti-proliferative activity (IC50) of this hydantoin derivative against the two cell lines (U251 and KB3-1) were 0.46 and 5.21 µM, respectively. The anti-proliferative activity of all of the compounds except for compounds 2a and 2d against U251 cells was higher than that of cisplatin. Bivalent symmetrical compound 1b had a biphenylmethane linker in the molecule. All of the tested bivalent hydantoin derivatives showed higher activity against U251 cells than against KB3-1 cells. For twin-drug type hydantoin derivatives 2a-d, which have a linear methylene linker in the molecules, it was found that methylene linker length in these molecules have an effect on the anti-proliferative activity against U251 and KB3-1 cells.
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Affiliation(s)
| | - Kaori Ota
- Faculty of Pharmaceutical Sciences, Fukuoka University
| | | | - Ryuji Ikeda
- Department of Pharmacy, University of Miyazaki Hospital
| | | | | | | | | | | | | | - Fumio Miake
- Faculty of Pharmaceutical Sciences, Fukuoka University
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11
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Rohse P, Weickert S, Drescher M, Wittmann V. Precipitation-free high-affinity multivalent binding by inline lectin ligands. Chem Sci 2020; 11:5227-5237. [PMID: 34122979 PMCID: PMC8159369 DOI: 10.1039/d0sc01744b] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2020] [Accepted: 04/27/2020] [Indexed: 11/21/2022] Open
Abstract
Multivalent ligand-protein interactions are a key concept in biology mediating, for example, signalling and adhesion. Multivalent ligands often have tremendously increased binding affinities. However, they also can cause crosslinking of receptor molecules leading to precipitation of ligand-receptor complexes. Plaque formation due to precipitation is a known characteristic of numerous fatal diseases limiting a potential medical application of multivalent ligands with a precipitating binding mode. Here, we present a new design of high-potency multivalent ligands featuring an inline arrangement of ligand epitopes with exceptionally high binding affinities in the low nanomolar range. At the same time, we show with a multi-methodological approach that precipitation of the receptor is prevented. We distinguish distinct binding modes of the ligands, in particular we elucidate a unique chelating binding mode, where four receptor binding sites are simultaneously bridged by one multivalent ligand molecule. The new design concept of inline multivalent ligands, which we established for the well-investigated model lectin wheat germ agglutinin, has great potential for the development of high-potency multivalent inhibitors as future therapeutics.
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Affiliation(s)
- Philipp Rohse
- University of Konstanz, Department of Chemistry, Konstanz Research School Chemical Biology (KoRS-CB) Universitätsstraße 10 78457 Konstanz Germany
| | - Sabrina Weickert
- University of Konstanz, Department of Chemistry, Konstanz Research School Chemical Biology (KoRS-CB) Universitätsstraße 10 78457 Konstanz Germany
| | - Malte Drescher
- University of Konstanz, Department of Chemistry, Konstanz Research School Chemical Biology (KoRS-CB) Universitätsstraße 10 78457 Konstanz Germany
| | - Valentin Wittmann
- University of Konstanz, Department of Chemistry, Konstanz Research School Chemical Biology (KoRS-CB) Universitätsstraße 10 78457 Konstanz Germany
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12
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Fischer L, Steffens RC, Paul TJ, Hartmann L. Catechol-functionalized sequence-defined glycomacromolecules as covalent inhibitors of bacterial adhesion. Polym Chem 2020. [DOI: 10.1039/d0py00975j] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Herein, we present the synthesis of catechol functionalized sequence-defined glycomacromolecules that can covalently block the binding site of lectins and bacterial adhesins.
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Affiliation(s)
- Lukas Fischer
- Institut für Organische und Makromolekulare Chemie
- Heinrich-Heine-Universität Düsseldorf
- 40225 Düsseldorf
- Germany
| | - Ricarda C. Steffens
- Institut für Organische und Makromolekulare Chemie
- Heinrich-Heine-Universität Düsseldorf
- 40225 Düsseldorf
- Germany
| | - Tanja J. Paul
- Institut für Organische und Makromolekulare Chemie
- Heinrich-Heine-Universität Düsseldorf
- 40225 Düsseldorf
- Germany
| | - Laura Hartmann
- Institut für Organische und Makromolekulare Chemie
- Heinrich-Heine-Universität Düsseldorf
- 40225 Düsseldorf
- Germany
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13
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de la Cruz N, Ramos-Soriano J, Reina JJ, de Paz JL, Thépaut M, Fieschi F, Sousa-Herves A, Rojo J. Influence of the reducing-end anomeric configuration of the Man9 epitope on DC-SIGN recognition. Org Biomol Chem 2020; 18:6086-6094. [DOI: 10.1039/d0ob01380c] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The anomeric configuration of the reducing end of Man9 does not influence the binding to DC-SIGN.
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Affiliation(s)
- Noelia de la Cruz
- Glycosystems Laboratory
- Instituto de Investigaciones Químicas (IIQ)
- CSIC – Universidad de Sevilla
- Seville 41092
- Spain
| | - Javier Ramos-Soriano
- Glycosystems Laboratory
- Instituto de Investigaciones Químicas (IIQ)
- CSIC – Universidad de Sevilla
- Seville 41092
- Spain
| | - José J. Reina
- Glycosystems Laboratory
- Instituto de Investigaciones Químicas (IIQ)
- CSIC – Universidad de Sevilla
- Seville 41092
- Spain
| | - José L. de Paz
- Glycosystems Laboratory
- Instituto de Investigaciones Químicas (IIQ)
- CSIC – Universidad de Sevilla
- Seville 41092
- Spain
| | - Michel Thépaut
- Univ. Grenoble Alpes
- CNRS
- CEA
- Institut de Biologie Structurale
- 38000 Grenoble
| | - Franck Fieschi
- Univ. Grenoble Alpes
- CNRS
- CEA
- Institut de Biologie Structurale
- 38000 Grenoble
| | - Ana Sousa-Herves
- Glycosystems Laboratory
- Instituto de Investigaciones Químicas (IIQ)
- CSIC – Universidad de Sevilla
- Seville 41092
- Spain
| | - Javier Rojo
- Glycosystems Laboratory
- Instituto de Investigaciones Químicas (IIQ)
- CSIC – Universidad de Sevilla
- Seville 41092
- Spain
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14
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Yu G, Vicini AC, Pieters RJ. Assembly of Divalent Ligands and Their Effect on Divalent Binding to Pseudomonas aeruginosa Lectin LecA. J Org Chem 2019; 84:2470-2488. [PMID: 30681333 PMCID: PMC6399674 DOI: 10.1021/acs.joc.8b02727] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
![]()
Divalent
ligands were prepared as inhibitors for the adhesion protein
of the problematic Pseudomonas aeruginosa pathogen.
Bridging two binding sites enables simultaneous binding of two galactose
moieties, which strongly enhances binding. An alternating motif of
glucose and triazole and aryl groups was shown to have the right mix
of rigidity, solubility, and ease of synthesis. Spacers were varied
with respect to the core unit as well as the aglycon portions in an
attempt to optimize dynamics and enhance interactions with the protein.
Affinities of the divalent ligands were measured by ITC, and Kd’s as low as 12 nM were determined,
notably for a compounds with either a rigid (phenyl) or flexible (butyl)
unit at the core. Introducing a phenyl aglycon moiety next to the
galactoside ligands on both termini did indeed lead to a higher enthalpy
of binding, which was more than compensated by entropic costs. The
results are discussed in terms of thermodynamics and theoretical calculations
of the expected and observed multivalency effects.
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Affiliation(s)
- Guangyun Yu
- Department of Chemical Biology & Drug Discovery , Utrecht Institute for Pharmaceutical Sciences, Utrecht University , P.O. Box 80082, 3508 TB Utrecht , The Netherlands
| | - Anna Chiara Vicini
- Department of Chemical Biology & Drug Discovery , Utrecht Institute for Pharmaceutical Sciences, Utrecht University , P.O. Box 80082, 3508 TB Utrecht , The Netherlands
| | - Roland J Pieters
- Department of Chemical Biology & Drug Discovery , Utrecht Institute for Pharmaceutical Sciences, Utrecht University , P.O. Box 80082, 3508 TB Utrecht , The Netherlands
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15
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Tong Q, Schmidt MS, Wittmann V, Mecking S. Multivalent Carbohydrate-Functionalized Polymer Nanocrystals. Biomacromolecules 2019; 20:294-304. [PMID: 30512919 DOI: 10.1021/acs.biomac.8b01460] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Nanoparticles with a covalently bound shell of carbohydrate or sulfate groups, respectively, and a polyethylene core were generated by Ni(II)-catalyzed aqueous copolymerization of ethylene with comonomers undec-10-en-1-yl sulfate, undec-10-en-1-yl β-d-glucoside or undec-10-en-1-yl α-d-mannoside, respectively. Via remote substituents of the catalyst, the degree of branching and consequently degree of crystallinity of the polyethylene core of the glyconanoparticles could be controlled. This in turn impacts particle shapes, from spherical to anisotropic platelets, as observed by cryo-transmission electron microscopy. Enzyme-linked lectin assays revealed the mannose-decorated nanocrystals to be efficient multivalent ligands for concavalin A.
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Affiliation(s)
- Qiong Tong
- Department of Chemistry , University of Konstanz , Universitätsstraße 10 , D-78457 Konstanz , Germany
| | - Magnus S Schmidt
- Department of Chemistry , University of Konstanz , Universitätsstraße 10 , D-78457 Konstanz , Germany
| | - Valentin Wittmann
- Department of Chemistry , University of Konstanz , Universitätsstraße 10 , D-78457 Konstanz , Germany
| | - Stefan Mecking
- Department of Chemistry , University of Konstanz , Universitätsstraße 10 , D-78457 Konstanz , Germany
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16
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Jacobi F, Camaleño de la Calle A, Boden S, Grafmüller A, Hartmann L, Schmidt S. Multivalent Binding of Precision Glycooligomers on Soft Glycocalyx Mimicking Hydrogels. Biomacromolecules 2018; 19:3479-3488. [DOI: 10.1021/acs.biomac.8b00790] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Fawad Jacobi
- Institute of Organic and Macromolecular Chemistry, Heinrich-Heine-University Düsseldorf, Universitatsstraße 1, 40225 Dusseldorf, Germany
| | - Alberto Camaleño de la Calle
- Institute of Organic and Macromolecular Chemistry, Heinrich-Heine-University Düsseldorf, Universitatsstraße 1, 40225 Dusseldorf, Germany
| | - Sophia Boden
- Institute of Organic and Macromolecular Chemistry, Heinrich-Heine-University Düsseldorf, Universitatsstraße 1, 40225 Dusseldorf, Germany
| | - Andrea Grafmüller
- Department of Theory and Bio-Systems, Max Planck Institute of Colloids and Interfaces, Am Mühlenberg 1, 14478 Potsdam, Germany
| | - Laura Hartmann
- Institute of Organic and Macromolecular Chemistry, Heinrich-Heine-University Düsseldorf, Universitatsstraße 1, 40225 Dusseldorf, Germany
| | - Stephan Schmidt
- Institute of Organic and Macromolecular Chemistry, Heinrich-Heine-University Düsseldorf, Universitatsstraße 1, 40225 Dusseldorf, Germany
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17
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Rodriguez J, O'Neill S, Walczak MA. Constrained saccharides: a review of structure, biology, and synthesis. Nat Prod Rep 2018. [PMID: 29513338 DOI: 10.1039/c7np00050b] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
Review primarily covers from 1995-2018Carbohydrate function, recognized in a multitude of biological processes, provides a precedent for developing carbohydrate surrogates that mimic the structure and function of bioactive compounds. In order to constrain highly flexible oligosaccharides, synthetic tethering techniques like those exemplified by stapled peptides are utilized to varying degrees of success. Naturally occurring constrained carbohydrates, however, exist with noteworthy cytotoxic and chemosensitizing properties. This review highlights the structure, biology, and synthesis of this intriguing class of molecules.
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Affiliation(s)
- Jacob Rodriguez
- Department of Chemistry and Biochemistry, University of Colorado 215 UCB, Boulder, CO 80309, USA.
| | - Sloane O'Neill
- Department of Chemistry and Biochemistry, University of Colorado 215 UCB, Boulder, CO 80309, USA.
| | - Maciej A Walczak
- Department of Chemistry and Biochemistry, University of Colorado 215 UCB, Boulder, CO 80309, USA.
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18
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Baier M, Giesler M, Hartmann L. Split-and-Combine Approach Towards Branched Precision Glycomacromolecules and Their Lectin Binding Behavior. Chemistry 2018; 24:1619-1630. [DOI: 10.1002/chem.201704179] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2017] [Indexed: 12/18/2022]
Affiliation(s)
- Mischa Baier
- Institute of Organic and Macromolecular Chemistry; Heinrich-Heine-University Duesseldorf; Universitaetsstraße 1 40225 Duesseldorf Germany
| | - Markus Giesler
- Institute of Organic and Macromolecular Chemistry; Heinrich-Heine-University Duesseldorf; Universitaetsstraße 1 40225 Duesseldorf Germany
| | - Laura Hartmann
- Institute of Organic and Macromolecular Chemistry; Heinrich-Heine-University Duesseldorf; Universitaetsstraße 1 40225 Duesseldorf Germany
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19
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Igde S, Röblitz S, Müller A, Kolbe K, Boden S, Fessele C, Lindhorst TK, Weber M, Hartmann L. Linear Precision Glycomacromolecules with Varying Interligand Spacing and Linker Functionalities Binding to Concanavalin A and the Bacterial Lectin FimH. Macromol Biosci 2017; 17. [DOI: 10.1002/mabi.201700198] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2017] [Revised: 08/18/2017] [Indexed: 12/16/2022]
Affiliation(s)
- Sinaida Igde
- Department for Organic Chemistry and Macromolecular Chemistry; Heinrich-Heine-Universität; Universitätsstraße 1 40225 Düsseldorf Germany
| | - Susanna Röblitz
- Department of Numerical Mathematics; Zuse Institute Berlin (ZIB); Takustr. 7 14195 Berlin Germany
- Department of Mathematics and Computer Science; Freie Universität Berlin; Arnimallee 6 14195 Berlin Germany
| | - Anne Müller
- Otto Diels Institute of Organic Chemistry; Christiana Albertina University of Kiel; Otto-Hahn-Platz 3-4 24118 Kiel Germany
| | - Katharina Kolbe
- Otto Diels Institute of Organic Chemistry; Christiana Albertina University of Kiel; Otto-Hahn-Platz 3-4 24118 Kiel Germany
| | - Sophia Boden
- Department for Organic Chemistry and Macromolecular Chemistry; Heinrich-Heine-Universität; Universitätsstraße 1 40225 Düsseldorf Germany
| | - Claudia Fessele
- Otto Diels Institute of Organic Chemistry; Christiana Albertina University of Kiel; Otto-Hahn-Platz 3-4 24118 Kiel Germany
| | - Thisbe K. Lindhorst
- Otto Diels Institute of Organic Chemistry; Christiana Albertina University of Kiel; Otto-Hahn-Platz 3-4 24118 Kiel Germany
| | - Marcus Weber
- Department of Numerical Mathematics; Zuse Institute Berlin (ZIB); Takustr. 7 14195 Berlin Germany
- Department of Mathematics and Computer Science; Freie Universität Berlin; Arnimallee 6 14195 Berlin Germany
| | - Laura Hartmann
- Department for Organic Chemistry and Macromolecular Chemistry; Heinrich-Heine-Universität; Universitätsstraße 1 40225 Düsseldorf Germany
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20
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Marczynke M, Gröger K, Seitz O. Selective Binders of the Tandem Src Homology 2 Domains in Syk and Zap70 Protein Kinases by DNA-Programmed Spatial Screening. Bioconjug Chem 2017; 28:2384-2392. [PMID: 28767218 DOI: 10.1021/acs.bioconjchem.7b00382] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Members of the Syk family of tyrosine kinases arrange Src homology 2 (SH2) domains in tandem to allow the firm binding of immunoreceptor tyrosine-based interaction motifs (ITAMs). While the advantages provided by the bivalency enhanced interactions are evident, the impact on binding specificity is less-clear. For example, the spleen tyrosine kinase (Syk) and the ζ-chain-associated protein kinase (ZAP-70) recognize the consensus sequence pYXXI/L(X)6-8 pYXXI/L with near-identical nanomolar affinity. The nondiscriminatory recognition, on the one hand, poses a specificity challenge for the design of subtype selective protein binders and, on the other hand, raises the question as to how differential activation of Syk and ZAP-70 is ensured when both kinases are co-expressed. Herein, we identified the criteria for the design of binders that specifically address either the Syk or the Zap-70 tSH2 domain. Our approach is based on DNA-programmed spatial screening. Tyrosine-phosphorylated peptides containing the pYXXI/L motif were attached to oligonucleotides and aligned in tandem on a DNA template by means of nucleic acid hybridization. The distance between the pYXXI/L motifs and the orientation of strands were varied. The exploration exposed remarkably different recognition characteristics. While Syk tSH2 has a rather broad substrate scope, ZAP-70 tSH2 required a proximal arrangement of the phosphotyrosine ligands in defined strand orientation. The spatial screen led to the design of mutually selective, DNA-free binders, which discriminate Zap-70 and Syk tSH2 by 1 order of magnitude in affinity.
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Affiliation(s)
- Michaela Marczynke
- Institut für Chemie, Humboldt-Universität zu Berlin , Brook-Taylor-Straße 2, D-12489 Berlin, Germany
| | - Katharina Gröger
- Institut für Chemie, Humboldt-Universität zu Berlin , Brook-Taylor-Straße 2, D-12489 Berlin, Germany
| | - Oliver Seitz
- Institut für Chemie, Humboldt-Universität zu Berlin , Brook-Taylor-Straße 2, D-12489 Berlin, Germany
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21
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Khan S, Khan SN, Meena R, Dar AM, Pal R, Khan AU. Photoinactivation of multidrug resistant bacteria by monomeric methylene blue conjugated gold nanoparticles. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2017; 174:150-161. [PMID: 28778019 DOI: 10.1016/j.jphotobiol.2017.07.011] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2017] [Revised: 06/14/2017] [Accepted: 07/14/2017] [Indexed: 10/19/2022]
Abstract
Multidrug resistant (MDR) bacterial infections have become a severe threat to the community health due to a progressive rise in antibiotic resistance. Nanoparticle-based photodynamic therapy (PDT) is increasingly been adopted as a potential antimicrobial option, yet the cytotoxicity associated with PDT is quite unspecific. Herein, we show Concanavalin-A (ConA) directed dextran capped gold nanoparticles (GNPDEX-ConA) enhanced the efficacy and selectivity of methylene blue (MB) induced killing of multidrug resistant clinical isolates. Here, we show that our complex MB@GNPDEX-ConA is effective against range of MDR clinical isolates, including Escherichia coli, Klebsiella pneumoniae and Enterobacter cloacae. In our treatment modality negligible dark toxicity suggests photochemically driven process with 97% killing of MDR bacteria. GNPDEX-ConA with monomeric form of MB departs maximum fluorescence decay time (τf: 1.7ns in HSA) and singlet oxygen (ΔΦ; 0.84) for improved activity in albumin rich infection sites. Further, the complex show least toxicity when tested against HEK293 mammalian cells. The principle component analysis (PCA) and confocal microscopy illustrates cytosolic 1O2 mediated type-II PDT as mechanism of action. Hence, MB@GNPDEX-ConA mediated PDT is potential therapeutic approach against MDR infections and can be tailored to fight other infectious diseases.
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Affiliation(s)
- Shakir Khan
- Interdisciplinary Biotechnology Unit, Aligarh Muslim University, Aligarh 202002, India
| | - Shahper N Khan
- Interdisciplinary Biotechnology Unit, Aligarh Muslim University, Aligarh 202002, India
| | - Ramovatar Meena
- School of Environmental Sciences, Jawaharlal Nehru University, New Delhi 110067, India
| | - Ayaz M Dar
- Department of Chemistry, Aligarh Muslim University, Aligarh 202002, India
| | - Ruchita Pal
- Advanced Instrumentation Research Facility, Jawaharlal Nehru University, New Delhi 110067, India
| | - Asad U Khan
- Interdisciplinary Biotechnology Unit, Aligarh Muslim University, Aligarh 202002, India.
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22
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Gerke C, Ebbesen MF, Jansen D, Boden S, Freichel T, Hartmann L. Sequence-Controlled Glycopolymers via Step-Growth Polymerization of Precision Glycomacromolecules for Lectin Receptor Clustering. Biomacromolecules 2017; 18:787-796. [PMID: 28117986 DOI: 10.1021/acs.biomac.6b01657] [Citation(s) in RCA: 48] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
A versatile approach for the synthesis of sequence-controlled multiblock copolymers, using a combination of solid phase synthesis and step-growth polymerization by photoinduced thiol-ene coupling (TEC) is presented. Following this strategy, a series of sequence-controlled glycopolymers is derived from the polymerization of a hydrophilic spacer macromonomer and different glycomacromonomers bearing between one to five α-d-Mannose (Man) ligands. Through the solid phase assembly of the macromonomers, the number and positioning of spacer and sugar moieties is controlled and translates into the sequence-control of the final polymer. A maximum M̅n of 16 kDa, corresponding to a X̅n of 10, for the applied macromonomers is accessible with optimized polymerization conditions. The binding behavior of the resulting multiblock glycopolymers toward the model lectin Concanavalin A (ConA) is studied via turbidity assays and surface plasmon resonance (SPR) measurements, comparing the ability of precision glycomacromolecules and glycopolymers to bind to and cross-link ConA in dependence of the number of sugar moieties and overall molecular weight. The results show that there is a clear correlation between number of Man ligands and Con A binding and clustering, whereas the length of the glycooligomer- or polymer backbone seems to have no effect.
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Affiliation(s)
- Christoph Gerke
- Institute of Organic and Macromolecular Chemistry, Heinrich-Heine-University Düsseldorf , Universitätsstraße 1, 40225 Düsseldorf, Germany
| | - Morten F Ebbesen
- Institute of Organic and Macromolecular Chemistry, Heinrich-Heine-University Düsseldorf , Universitätsstraße 1, 40225 Düsseldorf, Germany
| | - Dennis Jansen
- Institute of Organic and Macromolecular Chemistry, Heinrich-Heine-University Düsseldorf , Universitätsstraße 1, 40225 Düsseldorf, Germany
| | - Sophia Boden
- Institute of Organic and Macromolecular Chemistry, Heinrich-Heine-University Düsseldorf , Universitätsstraße 1, 40225 Düsseldorf, Germany
| | - Tanja Freichel
- Institute of Organic and Macromolecular Chemistry, Heinrich-Heine-University Düsseldorf , Universitätsstraße 1, 40225 Düsseldorf, Germany
| | - Laura Hartmann
- Institute of Organic and Macromolecular Chemistry, Heinrich-Heine-University Düsseldorf , Universitätsstraße 1, 40225 Düsseldorf, Germany
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23
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Bokor É, Kun S, Goyard D, Tóth M, Praly JP, Vidal S, Somsák L. C-Glycopyranosyl Arenes and Hetarenes: Synthetic Methods and Bioactivity Focused on Antidiabetic Potential. Chem Rev 2017; 117:1687-1764. [PMID: 28121130 DOI: 10.1021/acs.chemrev.6b00475] [Citation(s) in RCA: 133] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
This Review summarizes close to 500 primary publications and surveys published since 2000 about the syntheses and diverse bioactivities of C-glycopyranosyl (het)arenes. A classification of the preparative routes to these synthetic targets according to methodologies and compound categories is provided. Several of these compounds, regardless of their natural or synthetic origin, display antidiabetic properties due to enzyme inhibition (glycogen phosphorylase, protein tyrosine phosphatase 1B) or by inhibiting renal sodium-dependent glucose cotransporter 2 (SGLT2). The latter class of synthetic inhibitors, very recently approved as antihyperglycemic drugs, opens new perspectives in the pharmacological treatment of type 2 diabetes. Various compounds with the C-glycopyranosyl (het)arene motif were subjected to biological studies displaying among others antioxidant, antiviral, antibiotic, antiadhesive, cytotoxic, and glycoenzyme inhibitory effects.
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Affiliation(s)
- Éva Bokor
- Department of Organic Chemistry, University of Debrecen , P.O. Box 400, Debrecen H-4002, Hungary
| | - Sándor Kun
- Department of Organic Chemistry, University of Debrecen , P.O. Box 400, Debrecen H-4002, Hungary
| | - David Goyard
- Institut de Chimie et Biochimie Moléculaires et Supramoléculaires, Laboratoire de Chimie Organique 2 - Glycochimie, UMR 5246, Université Claude Bernard Lyon 1 and CNRS , 43 Boulevard du 11 Novembre 1918, Villeurbanne F-69622, France
| | - Marietta Tóth
- Department of Organic Chemistry, University of Debrecen , P.O. Box 400, Debrecen H-4002, Hungary
| | - Jean-Pierre Praly
- Institut de Chimie et Biochimie Moléculaires et Supramoléculaires, Laboratoire de Chimie Organique 2 - Glycochimie, UMR 5246, Université Claude Bernard Lyon 1 and CNRS , 43 Boulevard du 11 Novembre 1918, Villeurbanne F-69622, France
| | - Sébastien Vidal
- Institut de Chimie et Biochimie Moléculaires et Supramoléculaires, Laboratoire de Chimie Organique 2 - Glycochimie, UMR 5246, Université Claude Bernard Lyon 1 and CNRS , 43 Boulevard du 11 Novembre 1918, Villeurbanne F-69622, France
| | - László Somsák
- Department of Organic Chemistry, University of Debrecen , P.O. Box 400, Debrecen H-4002, Hungary
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24
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Abellán Flos M, García Moreno MI, Ortiz Mellet C, García Fernández JM, Nierengarten JF, Vincent SP. Potent Glycosidase Inhibition with Heterovalent Fullerenes: Unveiling the Binding Modes Triggering Multivalent Inhibition. Chemistry 2016; 22:11450-60. [DOI: 10.1002/chem.201601673] [Citation(s) in RCA: 59] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2016] [Indexed: 12/24/2022]
Affiliation(s)
- Marta Abellán Flos
- Département de Chimie, Laboratoire de Chimie Bio-Organique; University of Namur (UNamur); rue de Bruxelles 61 5000 Namur Belgium
| | - M. Isabel García Moreno
- Departamento de Química Orgánica; Facultad de Química; Universidad de Sevilla; C/Prof. García González 1 41012 Sevilla Spain
| | - Carmen Ortiz Mellet
- Departamento de Química Orgánica; Facultad de Química; Universidad de Sevilla; C/Prof. García González 1 41012 Sevilla Spain
| | - Jose Manuel García Fernández
- Instituto de Investigaciones Químicas (IIQ); CSIC - Universidad de Sevilla; Av. Américo Vespucio 49, Isla de la Cartuja 41092 Sevilla Spain
| | - Jean-Francois Nierengarten
- Laboratoire de Chimie des Matériaux Moléculaires; Université de Strasbourg et CNRS (UMR 7509); Ecole Européenne de Chimie, Polymères et Matériaux; 25 rue Becquerel 67087 Strasbourg France
| | - Stéphane P. Vincent
- Département de Chimie, Laboratoire de Chimie Bio-Organique; University of Namur (UNamur); rue de Bruxelles 61 5000 Namur Belgium
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25
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Rohse P, Wittmann V. Mechanistic Insight into Nanomolar Binding of Multivalent Neoglycopeptides to Wheat Germ Agglutinin. Chemistry 2016; 22:9724-33. [DOI: 10.1002/chem.201600657] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2016] [Indexed: 01/05/2023]
Affiliation(s)
- Philipp Rohse
- Department of Chemistry and Konstanz Research School Chemical Biology (KoRS-CB); University of Konstanz; 78457 Konstanz Germany
| | - Valentin Wittmann
- Department of Chemistry and Konstanz Research School Chemical Biology (KoRS-CB); University of Konstanz; 78457 Konstanz Germany
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26
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Parker K, Sampson NS. Precision Synthesis of Alternating Copolymers via Ring-Opening Polymerization of 1-Substituted Cyclobutenes. Acc Chem Res 2016; 49:408-17. [PMID: 26914522 PMCID: PMC4794705 DOI: 10.1021/acs.accounts.5b00490] [Citation(s) in RCA: 50] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2015] [Indexed: 12/20/2022]
Abstract
Investigation of complex molecular systems depends on our ability to correlate physical measurements with molecular structure. Interpretation of studies that rely on synthetic polymers is generally limited by their heterogeneity; i.e., there is variation in the number and arrangement of the monomeric building blocks that have been incorporated. Superior physics and biology can be performed with materials and tools that exert precise control over the sequence and spacing of functional groups. An interest in functional ligands combined with a desire to control the orientation and stereochemistry of monomer incorporation led to the design of new substrates for ruthenium-catalyzed ring-opening metathesis polymerization (ROMP). We discovered that ROMP of cyclobutene-1-carboxamides provides uniform and translationally invariant polymers. In contrast, cyclobutene-1-carboxylate esters ring open upon treatment with ruthenium catalyst, but they are stable to homopolymerization. However, in the presence of cyclohexene monomers, they undergo alternating ROMP (AROMP or alt-ROMP) to give copolymers with a precisely controlled sequence. The alternating cyclobutene ester/cyclohexene pair provides access to functional group spacing larger than is possible with homopolymers. This can be desirable; for example, polymers with a regular 8-10 Å backbone spacing of cationic charge and with between four and eight cationic groups were the most effective antibacterial agents and had low cytotoxicity. Moreover, the AROMP chemistry allows alternation of two functional moieties: one associated with the cyclohexene and one attached to the cyclobutene. In the case of antibacterial copolymers, the alternating chemistry allowed variation of hydrophobicity via the cyclohexene while maintaining a constant cation spacing through the cyclobutene. In the case of copolymers that bear donor and acceptor groups, strict alternation of the groups increased intrachain charge transfer. Like cyclobutene-1-carboxylate esters, bicyclo[4.2.0]oct-7-ene-7-carboxylate esters ring open upon treatment with ruthenium catalyst and undergo ring opening cross-metathesis with cyclohexene to form alternating copolymers. The corresponding bicyclo[4.2.0]oct-7-ene-7-carboxyamides isomerize to the bicyclo[4.2.0]oct-1(8)-ene-8-carboxamides before they can ring open. However, the isomerized amides undergo ruthenium-catalyzed ring opening metathesis and rapidly AROMP with cyclohexene. Our alternating copolymer systems allow functionality to be placed along a polymer chain with larger than typical spacing. We have used both homopolymers and alternating copolymers for defining the functional group density required for targeting a cell surface and for the exploration of functional group positioning within a polymer chain. These polymer systems provide access to new materials with previously inaccessible types of nanoscale structures.
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Affiliation(s)
- Kathlyn
A. Parker
- Department of Chemistry, Stony Brook University, Stony Brook, New York 11794-3400, United States
| | - Nicole S. Sampson
- Department of Chemistry, Stony Brook University, Stony Brook, New York 11794-3400, United States
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27
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Müller C, Despras G, Lindhorst TK. Organizing multivalency in carbohydrate recognition. Chem Soc Rev 2016; 45:3275-302. [DOI: 10.1039/c6cs00165c] [Citation(s) in RCA: 155] [Impact Index Per Article: 19.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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28
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Roy R, Shiao TC. Glyconanosynthons as powerful scaffolds and building blocks for the rapid construction of multifaceted, dense and chiral dendrimers. Chem Soc Rev 2015; 44:3924-41. [DOI: 10.1039/c4cs00359d] [Citation(s) in RCA: 48] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The arsenal of available carbohydrates can be manipulated to provide versatile building blocks toward the syntheses of complex and chiral dendrimers.
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Affiliation(s)
- René Roy
- Pharmaqam and Nanoqam
- Department of Chemistry
- Université du Québec à Montréal
- Montréal
- Canada
| | - Tze Chieh Shiao
- Pharmaqam and Nanoqam
- Department of Chemistry
- Université du Québec à Montréal
- Montréal
- Canada
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29
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Cecioni S, Imberty A, Vidal S. Glycomimetics versus Multivalent Glycoconjugates for the Design of High Affinity Lectin Ligands. Chem Rev 2014; 115:525-61. [DOI: 10.1021/cr500303t] [Citation(s) in RCA: 381] [Impact Index Per Article: 38.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Affiliation(s)
- Samy Cecioni
- CERMAV, Université Grenoble Alpes and CNRS, BP 53, F-38041 Grenoble Cedex 9, France
- Institut
de Chimie et Biochimie Moléculaires et Supramoléculaires,
Laboratoire de Chimie Organique 2 - Glycochimie, UMR 5246, Université Lyon 1 and CNRS, 43 Boulevard du 11 Novembre 1918, F-69622, Villeurbanne, France
| | - Anne Imberty
- CERMAV, Université Grenoble Alpes and CNRS, BP 53, F-38041 Grenoble Cedex 9, France
| | - Sébastien Vidal
- Institut
de Chimie et Biochimie Moléculaires et Supramoléculaires,
Laboratoire de Chimie Organique 2 - Glycochimie, UMR 5246, Université Lyon 1 and CNRS, 43 Boulevard du 11 Novembre 1918, F-69622, Villeurbanne, France
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