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Scesa PD, Schmidt EW. Pseudopterosin Biosynthesis: Unravelling a Decades Old Problem in Animal Specialized Metabolism. J Am Chem Soc 2025; 147:3072-3079. [PMID: 39818847 PMCID: PMC11784711 DOI: 10.1021/jacs.4c09925] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2024] [Revised: 12/06/2024] [Accepted: 01/09/2025] [Indexed: 01/19/2025]
Abstract
Soft corals are prolific producers of terpenoids, such as pseudopterosins. The exact biosynthetic pathway of these anti-inflammatory diterpene glycosides has eluded the scientific community for decades. Using a forward genetic approach, we have identified, cloned, and expressed the key genes involved in pseudopterosin biosynthesis. We characterized a unique class of multifunctional cytochrome P450 enzymes that catalyze a cascade reaction that produces a nearly mature natural product using a single enzyme. This clarifies the previously proposed biosynthetic pathways to pseudopterosin A and its relatives. The mechanism of the oxidative cascade was probed using in vivo feeding studies in Saccharomyces cerevisiae expressing heterologous coral genes. The cascade produces the pseudopterosin aglycone 7,8-dihydroxyerogorgiaene via elisabethatrienol and its epimer, starting from elisabethatriene. This discovery demonstrates the potential to produce this valuable class of natural products using fermentation.
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Affiliation(s)
- Paul D. Scesa
- Department of Medicinal Chemistry, University of Utah, 30 South 2000 East, Salt
Lake City, Utah 84112, United States
| | - Eric W. Schmidt
- Department of Medicinal Chemistry, University of Utah, 30 South 2000 East, Salt
Lake City, Utah 84112, United States
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Rodríguez II, Rodríguez AD, Barnes CL. Isolation, Structural Analysis and Biological Activity Assays of Biselisabethoxanes A and B: Two Dissymmetric Bis-Diterpenes from the Southwestern Caribbean Sea Gorgonian Coral Pseudopterogorgia elisabethae. MOLECULES (BASEL, SWITZERLAND) 2022; 27:molecules27227879. [PMID: 36431975 PMCID: PMC9694721 DOI: 10.3390/molecules27227879] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/20/2022] [Revised: 11/07/2022] [Accepted: 11/11/2022] [Indexed: 11/17/2022]
Abstract
Two novel dissymmetric diterpenoids, biselisabethoxanes A and B (1 and 2), were isolated from the hexane extracts of the gorgonian coral Pseudopterogorgia elisabethae. Biselisabethoxane A (1) represents the first example of a marine-derived C40 dimer made of two distinct diterpene fragments, whereas biselisabethoxane B (2) is a fused heterodimer stemming from coupling of two amphilectane-based fragments. The structures of 1 and 2 were elucidated based on 1D and 2D NMR spectral data analysis. The molecular structure of 1 was subsequently confirmed by X-ray crystallographic analysis. When evaluated for their inhibitory effects in a series of well-established biological activity assays the isolated compounds were shown to moderately inhibit the growth of Mycobacterium tuberculosis.
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Affiliation(s)
- Ileana I. Rodríguez
- Department of Chemistry, University of Puerto Rico–Río Piedras Campus, P.O. Box 23346, UPR Station, San Juan, PR 00931, USA
| | - Abimael D. Rodríguez
- Department of Chemistry, University of Puerto Rico–Río Piedras Campus, P.O. Box 23346, UPR Station, San Juan, PR 00931, USA
- Molecular Sciences Research Center, University of Puerto Rico–Río Piedras Campus, 1390 Ponce de León Avenue, San Juan, PR 00926, USA
- Correspondence:
| | - Charles L. Barnes
- Department of Chemistry, University of Missouri-Columbia, Columbia, MO 65211, USA
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Kracht ON, Ammann AC, Stockmann J, Wibberg D, Kalinowski J, Piotrowski M, Kerr R, Brück T, Kourist R. Transcriptome profiling of the Australian arid-land plant Eremophila serrulata (A.DC.) Druce (Scrophulariaceae) for the identification of monoterpene synthases. PHYTOCHEMISTRY 2017; 136:15-22. [PMID: 28162767 DOI: 10.1016/j.phytochem.2017.01.016] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/07/2016] [Revised: 01/13/2017] [Accepted: 01/23/2017] [Indexed: 05/22/2023]
Abstract
Plant terpenoids are a large and highly diverse class of metabolites with an important role in the immune defense. They find wide industrial application as active pharmaceutical ingredients, aroma and fragrance compounds. Several Eremophila sp. derived terpenoids have been documented. To elucidate the terpenoid metabolism, the transcriptome of juvenile and mature Eremophila serrulata (A.DC.) Druce (Scrophulariaceae) leaves was sequenced and a transcript library was generated. We report on the first transcriptomic dataset of an Eremophila plant. IlluminaMiSeq sequencing (2 × 300 bp) revealed 7,093,266 paired reads, which could be assembled to 34,505 isogroups. To enable detection of terpene biosynthetic genes, leaves were separately treated with methyl jasmonate, a well-documented inducer of plant secondary metabolites. In total, 21 putative terpene synthase genes were detected in the transcriptome data. Two terpene synthase isoenzymatic genes, termed ES01 and ES02, were successfully expressed in E. coli. The resulting proteins catalyzed the conversion of geranyl pyrophosphate, the universal substrate of monoterpene synthases to myrcene and Z-(b)-ocimene, respectively. The transcriptomic data and the discovery of the first terpene synthases from Eremophila serrulata are the initial step for the understanding of the terpene metabolism in this medicinally important plant genus.
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Affiliation(s)
- Octavia Natascha Kracht
- Junior Research Group for Microbial Biotechnology, Ruhr-Universität Bochum, Universitätsstraße 150, 44780 Bochum, Germany
| | - Ann-Christin Ammann
- Junior Research Group for Microbial Biotechnology, Ruhr-Universität Bochum, Universitätsstraße 150, 44780 Bochum, Germany
| | - Julia Stockmann
- Junior Research Group for Microbial Biotechnology, Ruhr-Universität Bochum, Universitätsstraße 150, 44780 Bochum, Germany
| | - Daniel Wibberg
- Centre for Biotechnology, University of Bielefeld, 33615 Bielefeld, Germany
| | - Jörn Kalinowski
- Centre for Biotechnology, University of Bielefeld, 33615 Bielefeld, Germany
| | - Markus Piotrowski
- Chair of Plant Physiology, Ruhr-Universität Bochum, Universitätsstraße 150, 44780 Bochum, Germany
| | - Russell Kerr
- Marine Natural Products Lab, University of Prince Edward Island, 550 University Avenue, Charlottetown, PEI, Canada
| | - Thomas Brück
- Chair of Industrial Biocatalysis, Technical University of Munich, Lichtenbergstraße 4, 85748 Garching, Germany
| | - Robert Kourist
- Junior Research Group for Microbial Biotechnology, Ruhr-Universität Bochum, Universitätsstraße 150, 44780 Bochum, Germany.
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Abstract
The 15 published total syntheses of the pseudopterosins are reviewed, with focus on strategic considerations and an emphasis on ring formation.
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Gong HY, Zeng Y, Chen XY. Diterpene synthases and their responsible cyclic natural products. NATURAL PRODUCTS AND BIOPROSPECTING 2014; 4:59-72. [PMID: 24858310 PMCID: PMC4004862 DOI: 10.1007/s13659-014-0012-8] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/20/2014] [Accepted: 03/23/2014] [Indexed: 05/11/2023]
Abstract
This review provides an overview of diterpene synthases which were initially identified via genetic and/or biochemical means, traversing all organisms researched to date.
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Affiliation(s)
- Hai-Yan Gong
- State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, Chinese Academy of Sciences, 132 Lanhei Road, Kunming, 650201 China
- University of Chinese Academy of Sciences, Beijing, 100049 China
| | - Ying Zeng
- State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, Chinese Academy of Sciences, 132 Lanhei Road, Kunming, 650201 China
| | - Xiao-Ya Chen
- National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Shanghai, 200032 China
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Brück T, Kourist R, Loll B. Production of Macrocyclic Sesqui- and Diterpenes in Heterologous Microbial Hosts: A Systems Approach to Harness Nature’s Molecular Diversity. ChemCatChem 2014. [DOI: 10.1002/cctc.201300733] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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Berrué F, McCulloch MWB, Kerr RG. Marine diterpene glycosides. Bioorg Med Chem 2011; 19:6702-19. [PMID: 21783368 DOI: 10.1016/j.bmc.2011.06.083] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2011] [Revised: 06/16/2011] [Accepted: 06/28/2011] [Indexed: 10/18/2022]
Abstract
Marine diterpene glycosides (MDGs) respresent a small but highly significant group of the much larger class of marine diterpenes. The three well-studied examples of MDGs are eleutherobins, pseudopterosins and fuscosides, all of which exhibit extremely promising biological activity. The eleutherobins are potent anti-mitotic agents, and the pseudopterosins and fuscosides are potent anti-inflammatory agents. This review discusses the structures and biological activities of these compounds, as well as their biosynthesis and synthesis.
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Affiliation(s)
- Fabrice Berrué
- Department of Chemistry, University of Prince Edward Island, Charlottetown, PEI, Canada
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Lodewyk MW, Gutta P, Tantillo DJ. Computational Studies on Biosynthetic Carbocation Rearrangements Leading to Sativene, Cyclosativene, α-Ylangene, and β-Ylangene. J Org Chem 2008; 73:6570-9. [DOI: 10.1021/jo800868r] [Citation(s) in RCA: 54] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Michael W. Lodewyk
- Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, California 95616
| | - Pradeep Gutta
- Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, California 95616
| | - Dean J. Tantillo
- Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, California 95616
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Dunlap WC, Battershill CN, Liptrot CH, Cobb RE, Bourne DG, Jaspars M, Long PF, Newman DJ. Biomedicinals from the phytosymbionts of marine invertebrates: A molecular approach. Methods 2007; 42:358-76. [PMID: 17560324 DOI: 10.1016/j.ymeth.2007.03.001] [Citation(s) in RCA: 65] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2006] [Revised: 03/07/2007] [Accepted: 03/09/2007] [Indexed: 11/22/2022] Open
Abstract
Marine invertebrate animals such as sponges, gorgonians, tunicates and bryozoans are sources of biomedicinally relevant natural products, a small but growing number of which are advancing through clinical trials. Most metazoan and anthozoan species harbour commensal microorganisms that include prokaryotic bacteria, cyanobacteria (blue-green algae), eukaryotic microalgae, and fungi within host tissues where they reside as extra- and intra-cellular symbionts. In some sponges these associated microbes may constitute as much as 40% of the holobiont volume. There is now abundant evidence to suggest that a significant portion of the bioactive metabolites thought originally to be products of the source animal are often synthesized by their symbiotic microbiota. Several anti-cancer metabolites from marine sponges that have progressed to pre-clinical or clinical-trial phases, such as discodermolide, halichondrin B and bryostatin 1, are thought to be products derived from their microbiotic consortia. Freshwater and marine cyanobacteria are well recognised for producing numerous and structurally diverse bioactive and cytotoxic secondary metabolites suited to drug discovery. Sea sponges often contain dominant taxa-specific populations of cyanobacteria, and it is these phytosymbionts (= photosymbionts) that are considered to be the true biogenic source of a number of pharmacologically active polyketides and nonribosomally synthesized peptides produced within the sponge. Accordingly, new collections can be pre-screened in the field for the presence of phytobionts and, together with metagenomic screening using degenerate PCR primers to identify key polyketide synthase (PKS) and nonribosomal peptide synthetase (NRPS) genes, afford a biodiscovery rationale based on the therapeutic prospects of phytochemical selection. Additionally, new cloning and biosynthetic expression strategies may provide a sustainable method for the supply of new pharmaceuticals derived from the uncultured phytosymbionts of marine organisms.
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Affiliation(s)
- Walter C Dunlap
- Australian Institute of Marine Science, Townsville, Queensland, Australia.
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