Characterizing kinetics of transport and transformation of selenium in water-sediment microcosm free from selenium contamination using a simple mathematical model

Microbial functional communities and the antibiotic resistome profile in a high-selenium ecosystem

Enshi City, in the Hubei Province of China, is known as the world capital of selenium with the most abundant selenium resource. An important selenium hyperaccumulator plant, Cardamine violifolia, was found to naturally grow in this high-selenium ecosystem. However, relatively little is known about the impact of the selenium levels on microbial community and functional shifts in C. violifolia rhizosphere. Here, we tested the hypothesis that underground microbial diversity and function vary along a selenium gradient, including antibiotic resistance genes (ARGs). Comprehensive metagenomic analyses, such as taxonomic investigation, functional detection, and ARG annotation, showed that selenium, mercury, cadmium, lead, arsenic, and available phosphorus and potassium were correlated with microbial diversity and function. Thaumarchaeota was exclusively dominant in the highest selenium concentration of mine outcrop, and Rhodanobacter and Nitrospira were predominant in the high-selenium ecosystem. The plant C. violifolia enriched a high concentration of selenium in the rhizosphere compared to those in the bulk soil, and it recruited Variovorax and Polaromonas in its rhizosphere. Microbial abundance showed a trend of increasing first and then decreasing from low to high selenium concentrations. Annotation of ARGs showed that the multidrug resistance genes adeF, mtrA, and poxtA, the aminoglycoside resistance gene rpsL, and the sulfonamide resistant gene sul2 were enriched in the high-selenium system. It was discovered that putative antibiotic resistant bacteria displayed obvious differences in the farmland and the soils with various selenium concentrations, indicating that a high-selenium ecosystem harbors the specific microbes with a higher capacity to enrich or resist selenium, toxic metals, or antibiotics. Taken together, these results reveal the effects of selenium concentration and the selenium hyperaccumulator plant C. violifolia on shaping the microbial functional community and ARGs. Metalloid selenium-inducible antibiotic resistance is worth paying attention to in future.

Laboratory study of Se speciation in the sediment and oligochaete Lumbriculus variegatus from an aquatic environment

Sediments are the major sink for selenium (Se) in aquatic environments. Se speciation in sediments is crucial for its bioavailability and toxicity in benthos, but this is relatively understudied. In this study, the background levels of Se in the river sediments, fish flakes, and Lumbriculus variegatus were also detected. Then, the dynamic changes of selenium speciation and concentrations in sediments were investigated after adding selenite (Se(IV)) and seleno-L-methionine (Se-Met) in the sediments for 90 and 7 days, and the accumulation and depuration of Se(IV) and Se-Met for 7 days in the oligochaete L. variegatus were also explored. Without the presence of worms, the levels of Se(IV) in the sediments were relatively stable within 7 days but showed a decreasing trend during the 90 days of aging. In contrast, Se-Met in the sediments showed a sharp decrease within 3 days of aging. The LC₅₀-96 h values of Se(IV) and Se-Met in L. variegatus were 372.6 and 9.4 μg/g, respectively. Interestingly, the dominant Se species in Se(IV)- or Se-Met-treated L. variegatus was Se-Met, whose level was increased with time in 7 days of exposure. Se was barely depurated from L. variegatus during the 8 days of the depuration period. This study has provided indispensable data on the levels of total Se in the abiotic and biotic matrices and the biodynamics of Se in a representative benthos, which could better understand the ecological risk of Se to the freshwater benthic communities.

Bioremediation of selenium-contaminated soil using earthworm Eisenia fetida: Effects of gut bacteria in feces on the soil microbiome

Selenium (Se) contamination in the soil poses a food safety risk to humans. The present study was to investigate the role of earthworm Eisenia fetida in soil Se remediation. When exposed to selenite at 4 mg Se/kg, E. fetida efficiently concentrated Se in tissues (24.53 mg Se/kg dry weight), however, only accounting for a minor portion of the added Se. Microbial analysis shows 12 out of 15 functional genera became more abundant in the worm-inhabited soil when exposed to Se, suggesting E. fetida contributed to Se remediation mainly by introducing Se-reducing bacteria to the soil via feces, which were dominated by the genera Pseudomonas (∼62.65%) and Aeromonas (∼29.99%), whose abundance was also significantly boosted in the worm-inhabited soil. However, when isolated from worm feces at 200 mg Se/L, Pseudomonas strains only displayed a high tolerance to Se rather than removal capacity. In contrast, among 4 isolated Aeromonas strains, A. caviae rapidly removing 85.74% of the added selenite, mainly through accumulation (67.38%), while A. hydrophila and A. veronii were more effective at volatilizing Se (27.77% and 24.54%, respectively), and A. media performed best by reducing Se by ∼49.00% under anaerobic conditions. Overall, our findings have highlighted the importance of E. fetida as a key contributor of functional bacteria to the soil microbiome, building a strong foundation for the development of an earthworm-soil system for Se bioremediation.

Remediation of selenium-contaminated soil through combined use of earthworm Eisenia fetida and organic materials

Selenium (Se)-polluted soils pose serious threats to terrestrial ecosystems through food chains. This study evaluated the use of earthworm Eisenia fetida and organic materials for Se remediation. The greater mortality (6.7%) and weight loss (28.6%) were observed for earthworms exposed to selenate than selenite at 20 mg Se Kg^-1 over 21 d, while selenate was taken up 2.5-fold faster than selenite. Compared with peat moss, Se accumulation increased by 119% in selenite-exposed earthworms supplied with cow manure. Earthworm activity caused greater reduction in selenite (17.4%), with little impact on selenate-treated soil. X-ray absorption spectroscopy speciation analysis shows 87-91% of tissue Se was transformed to organo-Se, i.e., SeMet and SeCys, in earthworms exposed to either selenite or selenate, posing great risks to their predators. The study also found selenium increased bacterial diversity in earthworm casts, while greater relative abundances (~37.57%) of functional genera were obtained for selenite. Over 24 h, two bacteria strains, Bacillus cereus and Aeromonas encheleia, isolated from casts, rapidly reduced selenite by ~94%, compared to ~25% for selenate. Elemental Se was present only in strains (~27%), casts (~11%) and worm-inhabited soil (~2.7%) of selenite treatments, suggesting earthworm gut microbiota could buffer earthworms and other soil fauna from selenite toxicity.

Interactive effects of earthworm Eisenia fetida and bean plant Phaseolus vulgaris L on the fate of soil selenium

Selenium (Se) is an essential micronutrient for animals with a narrow margin between essentiality and toxicity. Se toxicity is largely related to inorganic forms of Se in soil, i.e., selenite and selenate that enter food chains through plant uptake, threatening higher trophic level organisms. This experiment investigated effects of earthworm activity on Se bioavailability in soil and the subsequent plant uptake, using earthworm Eisenia fetida and bean plant Phaseolus vulgaris L, both exposed to either selenite or selenate at 1 or 4 mg Se kg^-1 for 16 weeks. Plants took up selenate (up to 221-fold) faster than selenite, with up to 84% of the Se rapidly transported to shoots. In the presence of earthworms, Se accumulation obviously increased for selenate-supplied plants, leading to an up to 4% increase in Se translocation factor for all treatments except for 1 mg kg^-1 selenite treatment. Earthworms also concentrated Se faster in tissues (up to 274 mg kg^-1 DW) at exposure to selenate. For Se toxicity, Se speciation analysis was conducted on the plants and earthworms using XAS. Compared to worm-free treatments, the percentage of organo-Se, i.e., SeMet and CysSeSeCys, increased in beans (up to 34%) in the presence of earthworms for selenate, while the elemental Se portion was significantly reduced or absent, opposite to the results for selenite. Surprisingly, elemental Se (up to 65%) dominated earthworms, regardless of the form of Se supplied. In conclusion, earthworms clearly enhanced Se uptake and translocation in plants, leading to elevated Se levels in shoots. To prevent resulting hazards to humans and other animals, caution should be taken while consuming the shoots, particularly beans, harvested from the Se contaminated soil where earthworm activity is high. Finally, the significant reduction in soil Se suggests phytoextraction of Se from the soil could be improved using earthworms as an aid to plants.

Effects of selenite and selenate application on distribution and transformation of selenium fractions in soil and its bioavailability for wheat (Triticum aestivum L.)

This study investigated the effect of selenate and selenite application on the distribution, transformation of selenium (Se) fractions in soil, as well as the accumulation and availability of Se in each part of wheat plants. A pot experiment was conducted using different concentrations of exogenous selenite or selenate (0.5, 1, 2.5, 5, and 10 mg Se kg^-1 soil). Sequential extraction was used to determine the Se fractions in soil, and different models were used to study the behavior of Se in soil and its availability to wheat. Results showed that the distribution and availability of Se in soil and its accumulation in wheat affected both by Se concentrations and forms of exogenous Se. In selenite-treated soil, the proportion of exchangeable and carbonate-bound Se (EXC-Se) (21-42%) fraction increased compared to that in control (12%), while organic matter-bound Se (OM-Se) (23-33%) and Fe-Mn oxide-bound Se (FMO-Se) (11-15%) fractions decreased compare with those in control (37 and 32%, respectively). In selenate-treated soil, soluble-Se (SOL-Se) fraction (30-54%) increased and the OM-Se (9.8-20%) and FMO-Se (4.7-14.2%) fractions decreased compared with those in control. Residual Se (RES-Se) fraction was increased for selenite (7.4-13.4%) and selenate (12-20%) treatments compared with that in control (6.5%). In comparison with control, the available Se (SOL-Se + EXC-Se) fraction increased for both selenite (32-47%) or selenate (54-72%) treatments. Moreover, at the same rate of Se application, Se availability was higher in wheat grown in selenate-treated soils than that in selenite-treated soils. The redistribution index (U _ts) of Se increased from 1 (in control) to 1.2-1.9 and 1.5-2 for selenite and selenate treatments, respectively; additionally, the mobility factor (MF) in selenate-treated soil was 40-90% higher than that in selenite-treated soil. Furthermore, relative bonding intensity (I _R ) for both selenite (0.38-0.45) and selenate treatment (0.33-0.41) decreased compared with that in control (0.55). These differences indicated that selenite and selenate varied in terms of fixation capacities in soil, in transformation and distribution of Se in soil fractions, and in their availability to plants. The results of Michaelis-Menten equation demonstrated the high affinity of leaf to selenate, and the high affinity of roots and grains to selenite. Selenate was dominant in nearly all parts of wheat plants and in each application level. However, the affinity of selenite to wheat grains suggests that selenite is a useful Se fertilizer that must be considered in biofortification programs. In-depth studies at the pot and field scales by using different wheat varieties and application methods of Se in different ecological zones must be conducted to elucidate the mechanism and biochemical properties of Se in soil-plant system and ultimately produce Se-rich staple foods.

Kinetics of selenate sorption in soil as influenced by biotic and abiotic conditions: a stirred flow-through reactor study

This study (i) quantified the kinetics of selenate sorption and (ii) measured the influence of biotic processes in soil selenate stabilisation. Stirred flow-through reactor experiments were conducted on samples of a silty clay soil (pH = 8, Eh = 240-300 mV) from Bure (France) in both non-sterile and sterile conditions. Parameters of the proposed two-site sorption model (EK), adapted from van Genuchten and Wagenet (1989), were estimated by nonlinear regression. Fast selenate sorption on type-1 sites was moderate, with an equilibrium constant of 25.5 and 39.1 L/kg for non-sterile and sterile conditions. Rate-limited sorption on type-2 sites increased with time, and was predominant for longer periods of time in non-sterile conditions. At equilibrium, it would represent over 96% of the sorbed inventory, with mean sorption times of 17 h and 191 h for non-sterile and sterile conditions. Our results showed for Bure soil that (i) selenate sorption in flowing and mildly-oxidising conditions was strongly kinetically controlled, especially in non-sterile conditions, (ii) selenate desorption was much slower than sorption, which suggests its pseudo-irreversible stabilisation, and (iii) microbial activity increased the contribution of rate-limited sorption on type-2 sites, for which it increased sorption rate by a factor 7 but also facilitated its reversibility. This work stresses the limits of the Kd approach to represent selenate sorption in flowing conditions and supports an alternative formulation like the EK model, but also points out that biotic conditions are significant sources of variability for sorption parameters.

Selenium concentration, speciation and behavior in surface waters of the Canadian prairies

Similar to the San Joaquin Valley of California, the Canadian prairies are underlain with seleniferous shale and have recently witnessed a significant expansion in irrigated agriculture. The irrigated acreage in the prairies is expected to further increase due to global warming and changes in human use patterns. This raises concerns over potential selenium (Se) contamination in prairie surface waters and risk of adverse biological effects. To test the potential for elevated Se in the prairies, Se concentrations and speciation were examined in surface water, sediments, and sediment porewater in three water bodies in southern Manitoba, Canada, along a north-south transect with a gradient of irrigation and agricultural activities. A selenite addition experiment was also performed in mesocosms in a prairie wetland to assess the risk of increasing Se loading to the prairie waters. Overall, our results indicate that Se concentrations in the prairie waters of southern Manitoba are presently low except during the snowmelt season, that Se speciation is dominated by selenate which is of lower toxicity than selenite, and that if additional selenite is discharged into the prairie waters, it will be quickly removed from the surface water to the sediment. The low Se risk in the Canadian prairies is attributed to high soil drainability and relatively small scale of irrigation at present. The Se problem as being experienced in central California is thus unlikely to occur in surface waters of the Canadian prairies, although Se contamination in ground water is possible should the irrigated acreage continue to increase.

Spatial distributions and potential risk analysis of total soil selenium in Guangdong Province, China

A total of 260 soil profiles were examined to investigate the spatial distribution of total soil selenium (Se) in Guangdong province, China. In the investigated area, the soil Se concentrations follow an approximately lognormal distribution. The soil Se geometric mean concentration of 0.23 mg kg(-1) is higher than that of Chinese soils; however, Se concentration varies over the study area. The baseline concentration of 0.13 to 0.41 mg kg(-1) indicates that the soil Se concentration is mostly in the range of deficiency to medium level for surface soils in Guangdong province. In A-, B-, and C-horizon, soil Se spatial distribution is correlated with the nature of the parent material, with high Se concentration mainly located in limestone and sandshale areas and low Se concentration associated with purple shale and granite areas. The spatial distribution pattern of soil Se concentrations suggests that potential Se deficiency may be an issue for human health in this province. Moreover, due to soil degradation and erosion, calculated soil Se exported into surrounding waters could reach approximately 23,000 kg yr(-1) in the study area.

Adsorption of Se species on crushed granite: A direct linkage with its internal iron-related minerals

The adsorption of selenium species on crushed granite is investigated directly linking to its internal iron-related minerals. Experimental results demonstrated that granite has higher affinity toward Se(IV) adsorption than Se(VI) adsorption. Se(IV) adsorption on granite is insensitive to background electrolytes while the effect of ionic strength on Se(VI) adsorption is not observed, which is attributed to the overloading of Se(VI) ions. Results of chemical sequential extraction showed that the removal of crystalline iron oxides dramatically reduces Se(IV) adsorption, which corresponds to the disappearance of goethite signal within XRD pattern. Based on our results, it is proposed that goethite within granite dominates Se adsorption in crushed granite. Although these goethites probably stem from some sample preparation processes including drilling in situ, crushing, washing and drying granite samples in laboratory, the formation of goethite enhances the granite affinity toward Se species adsorption. Images of SEM/EDS furthermore revealed that goethite is embedded within the fractures. In addition, quantification by standard addition method by spiking goethite suspension indicates that only around 20% of goethite minerals are available during Se(IV) adsorption.

The study of distribution and fate of nitrobenzene in a water/sediment microcosm

In November 2005, an explosion occurred at a petrochemical plant of the Jilin Petrochemical Corporation in Jilin Province, China. A nearby water body was seriously polluted with a large spill of toxic substances made up of a mixture of benzene, aniline, and nitrobenzene (NB). To understand the long term impact of NB on public health and ecosystem around the Songhua River, it was necessary to investigate its fate in the environment. In this study, a microcosm was used to mimic the polluted water system and to study the transport and fate of NB in the river water body. The volatility and biodegradation of NB was investigated and a Markov model was applied to predict the fate of NB in the environment. The simulated results matched very well with the results obtained from the microcosm experiment. The model indicated that at room temperature and after around 500 h, there was only residual NB in the water and sediment. Most of the NB (around 82%) evaporated into the air and 18% was degraded by microorganisms.

Bacterial reduction of selenium in coal mine tailings pond sediment

Sediment from a storage facility for coal tailings solids was assessed for its capacity to reduce selenium (Se) by native bacterial community. One Se(6+)-reducing bacterium Enterobacter hormaechei (Tar11) and four Se(4+)-reducing bacteria, Klebsiella pneumoniae (Tar1), Pseudomonas fluorescens (Tar3), Stenotrophomonas maltophilia (Tar6), and Enterobacter amnigenus (Tar8) were isolated from the sediment. Enterobacter hormaechei removed 96% of the added Se(6+) (0.92 mg L(-1)) from the effluents when Se(6+) was determined after 5 d of incubation. Analysis of the red precipitates showed that Se(6+) reduction resulted in the formation of spherical particles (<1.0 microm) of Se(0) as observed under scanning electron microscope (SEM) and confirmed by EDAX. Selenium speciation was performed to examine the fate of the added Se(6+) in the sediment with or without addition of Enterobacter hormaechei cells. More than 99% of the added Se(6+) (approximately 2.5 mg L(-1)) was transformed in the nonsterilized sediment (without Enterobacter hormaechei cells) as well as in the sterilized (heat-killed) sediment (with Enterobacter hormaechei cells). The results of this study suggest that the lagoon sediments at the mine site harbor Se(6+)- and Se(4+)-reducing bacteria and may be important sinks for soluble Se (Se(6+) and Se(4+)). Enterobacter hormaechei isolated from metal-contaminated sediment may have potential application in removing Se from industrial effluents.