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Behera S, Das S. Potential and prospects of Actinobacteria in the bioremediation of environmental pollutants: Cellular mechanisms and genetic regulations. Microbiol Res 2023; 273:127399. [PMID: 37150049 DOI: 10.1016/j.micres.2023.127399] [Citation(s) in RCA: 11] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2023] [Revised: 04/22/2023] [Accepted: 04/30/2023] [Indexed: 05/09/2023]
Abstract
Increasing industrialization and anthropogenic activities have resulted in the release of a wide variety of pollutants into the environment including pesticides, polycyclic aromatic hydrocarbons (PAHs), and heavy metals. These pollutants pose a serious threat to human health as well as to the ecosystem. Thus, the removal of these compounds from the environment is highly important. Mitigation of the environmental pollution caused by these pollutants via bioremediation has become a promising approach nowadays. Actinobacteria are a group of eubacteria mostly known for their ability to produce secondary metabolites. The morphological features such as spore formation, filamentous growth, higher surface area to volume ratio, and cellular mechanisms like EPS secretion, and siderophore production in Actinobacteria render higher resistance and biodegradation ability. In addition, these bacteria possess several oxidoreductase systems (oxyR, catR, furA, etc.) which help in bioremediation. Actinobacteria genera including Arthrobacter, Rhodococcus, Streptomyces, Nocardia, Microbacterium, etc. have shown great potential for the bioremediation of various pollutants. In this review, the bioremediation ability of these bacteria has been discussed in detail. The utilization of various genera of Actinobacteria for the biodegradation of organic pollutants, including pesticides and PAHs, and inorganic pollutants like heavy metals has been described. In addition, the cellular mechanisms in these microbes which help to withstand oxidative stress have been discussed. Finally, this review explores the Actinobacteria mediated strategies and recent technologies such as the utilization of mixed cultures, cell immobilization, plant-microbe interaction, utilization of biosurfactants and nanoparticles, etc., to enhance the bioremediation of various environmental pollutants.
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Affiliation(s)
- Shivananda Behera
- Laboratory of Environmental Microbiology and Ecology (LEnME), Department of Life Science, National Institute of Technology, Rourkela 769 008, Odisha, India
| | - Surajit Das
- Laboratory of Environmental Microbiology and Ecology (LEnME), Department of Life Science, National Institute of Technology, Rourkela 769 008, Odisha, India.
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Guerrero DS, Romero CM, Polti MA, Dávila Costa JS. Genome sequencing and genomic analysis of Amycolatopsis tucumanensis DSM 45259 applicable in gray, red, and nano-biotechnology. J Basic Microbiol 2022; 62:779-787. [PMID: 35551685 DOI: 10.1002/jobm.202200157] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2022] [Revised: 04/07/2022] [Accepted: 04/23/2022] [Indexed: 11/10/2022]
Abstract
Through the years, the genus Amycolatopsis has demonstrated its biotechnological potential. The need to clean up the environment and produce new antimicrobial molecules led to exploit promising bacterial genera such as Amycolatopsis. In this present work, we analyze the genome of the strain Amycolatopsis tucumanensis AB0 previously isolated from copper-polluted sediments. Phylogenomic and comparative analysis with the closest phylogenetic neighbor was performed. Our analysis showed the genetic potential of the strain to deal with heavy metals such as copper and mitigate oxidative stress. In addition, the ability to produce copper oxide nanoparticles and the presence of genes potentially involved in the synthesis of secondary metabolites suggest that A. tucumanensis may find utility in gray, red, and nano-biotechnology. To our knowledge, this is the first genomic analysis of an Amycolatopsis strain with potential for different biotechnological fields.
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Affiliation(s)
- Daiana S Guerrero
- Planta Piloto de Procesos Industriales Microbiológicos- (PROIMI-CONICET), Tucumán, Argentina
| | - Cintia M Romero
- Planta Piloto de Procesos Industriales Microbiológicos- (PROIMI-CONICET), Tucumán, Argentina.,Facultad de Bioquímica, Química y Farmacia, Universidad Nacional de Tucumán (UNT), Tucumán, Argentina
| | - Marta A Polti
- Planta Piloto de Procesos Industriales Microbiológicos- (PROIMI-CONICET), Tucumán, Argentina
| | - José S Dávila Costa
- Planta Piloto de Procesos Industriales Microbiológicos- (PROIMI-CONICET), Tucumán, Argentina
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3
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Guerrero DS, Bertani RP, Ledesma A, Frías MDLA, Romero CM, Dávila Costa JS. Silver nanoparticles synthesized by the heavy metal resistant strain Amycolatopsis tucumanensis and its application in controlling red strip disease in sugarcane. Heliyon 2022; 8:e09472. [PMID: 35615433 PMCID: PMC9124708 DOI: 10.1016/j.heliyon.2022.e09472] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2022] [Revised: 04/13/2022] [Accepted: 05/13/2022] [Indexed: 11/18/2022] Open
Abstract
The production of bioethanol and sugar from sugarcane is an important economic activity in several countries. Sugarcane is susceptible to different phytopathogens. Over the last years, the red stripe disease caused by the bacterium Acidovorax avenae subsp. avenae produced significant losses in sugarcane crops. Bio-nanotechnology emerged as an eco-friendly alternative to the biosynthesis of antimicrobial molecules. The aims of this study were to (a) produce extracellular silver nanoparticles using the heavy metal resistant strain Amycolatopsis tucumanensis, (b) evaluate their antibacterial in vitro effect and (c) determine the potential of silver nanoparticles to protect sugarcane against red stripe disease. Amycolatopsis tucumanensis synthesized spherical silver nanoparticles with an average size of 35 nm. Nanoparticles were able to control the growth of A. avenae subsp. avenae in in vitro assays. In addition, in vivo assays in sugarcane showed a control upon the red stripe disease when silver nanoparticles were applied as preventive treatment. The Disease Severity Index was 28.94% when silver nanoparticles were applied 3 days before inoculation with A. avenae subsp. avenae. To our knowledge, this is the first report of silver nanoparticles extracellularly synthesized by an Amycolatopsis strain that were able to inhibited the growth of A. avenae subsp. avenae and control the red stripe disease in sugarcane.
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Affiliation(s)
- Daiana S. Guerrero
- Planta Piloto de Procesos Industriales Microbiológicos- (PROIMI-CONICET), Av. Belgrano y Pasaje Caseros, T4001 MVB, Tucumán, Argentina
| | - Romina P. Bertani
- Estación Experimental Agroindustrial Obispo Colombres – Sección Fitopatología, Av. William Cross 3150, T4101 XAC, Tucumán, Argentina
| | - Ana Ledesma
- Centro de Investigación en Biofísica Aplicada y Alimentos (CIBAAL-UNSE-CONICET), Universidad Nacional de Santiago del Estero, R N Nº 9, Km 1125, El Zanjon, 4206, Santiago del Estero, Argentina
- Departamento Académico de Química, Facultad de Ciencias Exactas y Tecnologías, Universidad Nacional de Santiago del Estero (UNSE), Av. Belgrano Sur 1912, 4200, Santiago del Estero, Argentina
| | - M. de los Angeles Frías
- Centro de Investigación en Biofísica Aplicada y Alimentos (CIBAAL-UNSE-CONICET), Universidad Nacional de Santiago del Estero, R N Nº 9, Km 1125, El Zanjon, 4206, Santiago del Estero, Argentina
| | - Cintia M. Romero
- Planta Piloto de Procesos Industriales Microbiológicos- (PROIMI-CONICET), Av. Belgrano y Pasaje Caseros, T4001 MVB, Tucumán, Argentina
- Facultad de Bioquímica, Química y Farmacia, Universidad Nacional de Tucumán (UNT), Ayacucho 471, T4001 MVB, Tucumán, Argentina
| | - José S. Dávila Costa
- Planta Piloto de Procesos Industriales Microbiológicos- (PROIMI-CONICET), Av. Belgrano y Pasaje Caseros, T4001 MVB, Tucumán, Argentina
- Corresponding author.
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Marker-Free Genome Engineering in Amycolatopsis Using the pSAM2 Site-Specific Recombination System. Microorganisms 2022; 10:microorganisms10040828. [PMID: 35456877 PMCID: PMC9033027 DOI: 10.3390/microorganisms10040828] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2022] [Revised: 04/07/2022] [Accepted: 04/13/2022] [Indexed: 02/01/2023] Open
Abstract
Actinobacteria of the genus Amycolatopsis are important for antibiotic production and other valuable biotechnological applications such as bioconversion or bioremediation. Despite their importance, tools and methods for their genetic manipulation are less developed than in other actinobacteria such as Streptomyces. We report here the use of the pSAM2 site-specific recombination system to delete antibiotic resistance cassettes used in gene replacement experiments or to create large genomic deletions. For this purpose, we constructed a shuttle vector, replicating in Escherichia coli and Amycolatopsis, expressing the integrase and the excisionase from the Streptomyces integrative and conjugative element pSAM2. These proteins are sufficient for site-specific recombination between the attachment sites attL and attR. We also constructed two plasmids, replicative in E. coli but not in Amycolatopsis, for the integration of the attL and attR sites on each side of a large region targeted for deletion. We exemplified the use of these tools in Amycolatopsis mediterranei by obtaining with high efficiency a marker-free deletion of one single gene in the rifamycin biosynthetic gene cluster or of the entire 90-kb cluster. These robust and simple tools enrich the toolbox for genome engineering in Amycolatopsis.
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Mawang CI, Azman AS, Fuad ASM, Ahamad M. Actinobacteria: An eco-friendly and promising technology for the bioaugmentation of contaminants. BIOTECHNOLOGY REPORTS (AMSTERDAM, NETHERLANDS) 2021; 32:e00679. [PMID: 34660214 PMCID: PMC8503819 DOI: 10.1016/j.btre.2021.e00679] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/27/2020] [Revised: 08/05/2021] [Accepted: 09/20/2021] [Indexed: 11/17/2022]
Abstract
Over the past two decades, various eco-friendly approaches utilizing microbial species to clean up contaminated environments have surfaced. In this aspect, actinobacteria have demonstrated their potential in contaminant degradation. The members of actinobacteria phylum exhibits a cosmopolitan distribution, which means that they can be found widely in both aquatic and terrestrial ecosystems. Actinobacteria play important ecological roles in the environment, such as degrading complex polymers, recycling compounds, and producing bioactive molecules. Hence, using actinobacteria to clean up contaminants is an attractive method in the field of biotechnology. This can be achieved through the green technology of bioaugmentation, whereby the degradative capacity of contaminated areas can be greatly improved through the introduction of specific microorganisms. This review describes actinobacteria as an eco-friendly and a promising technology for the bioaugmentation of contaminants, with focus on pesticides and heavy metals.
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Affiliation(s)
- Christina-Injan Mawang
- Acarology Unit, Infectious Disease Research Centre, Institute for Medical Research, Ministry of Health Malaysia, National Institutes of Health Complex, Setia Alam, Shah Alam, Selangor, 40170, Malaysia
| | - Adzzie-Shazleen Azman
- School of Science, Monash University Malaysia, Jalan Lagoon Selatan, Bandar Sunway, Selangor, 47500, Malaysia
| | - Aalina-Sakiinah Mohd Fuad
- Department of Biomedical Science, Kulliyyah of Allied Health Sciences, International Islamic University Malaysia Kuantan Campus, Jalan Sultan Ahmad Shah, Bandar Indera Mahkota, Kuantan, Pahang 25200, Malaysia
| | - Mariana Ahamad
- Acarology Unit, Infectious Disease Research Centre, Institute for Medical Research, Ministry of Health Malaysia, National Institutes of Health Complex, Setia Alam, Shah Alam, Selangor, 40170, Malaysia
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Üreyen Esertaş ÜZ, Uzunalioğlu E, Güzel Ş, Bozdeveci A, Alpay Karaoğlu Ş. Determination of bioremediation properties of soil-borne Bacillus sp. 5O5Y11 and its effect on the development of Zea mays in the presence of copper. Arch Microbiol 2020; 202:1817-1829. [PMID: 32440759 DOI: 10.1007/s00203-020-01900-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2020] [Revised: 04/21/2020] [Accepted: 05/11/2020] [Indexed: 10/24/2022]
Abstract
Today, industrial activities lead to the accumulation of heavy metals in the soil, water, and air due to mine deposits and operations, fertilizers, and drugs used in agriculture, and urban wastes. Using microorganism bioremediation of metals is an important technique in solving these problems. Herein, a rhizoid bacterium isolated from orchids that grow in Ovit plateau was defined as Bacillus sp. 5O5Y11 by conventional and molecular methods and the bioremediation properties of strain were investigated. It was capable of growth at high salt (10-15%) concentration, wide temperature (10-45 °C) and pH range (pH 4.5-8.0), and was observed to have strong lecithinase, gelatinase activity, and nitrate reduction. When the plant growth-promoting properties of this strain were examined, strong siderophore and ammonium production were observed in in vitro conditions. Bacillus sp. 5O5Y11 was found to have high tolerance to a group of heavy metals [iron (Fe), copper (Cu), lead (Pb), silver (Ag), zinc (Zn)]. Minimum inhibition concentration (MIC) and minimum bactericidal concentration (MBC) values of copper metal on Bacillus sp. 5O5Y11 were determined as 12.5 mM and 50 mM, respectively. The effectiveness of this bacterium on the germination and growth of maize plant in the presence and absence of copper were investigated. These results suggest that Bacillus sp. 5O5Y11 is a microorganism, which has potential in metal bioremediation and plant growth promotion.
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Affiliation(s)
| | - Emel Uzunalioğlu
- Department of Biology, Faculty of Arts and Sciences, Recep Tayyip Erdoğan University, Rize, Turkey
| | - Şule Güzel
- Department of Biology, Faculty of Arts and Sciences, Recep Tayyip Erdoğan University, Rize, Turkey
| | - Arif Bozdeveci
- Department of Biology, Faculty of Arts and Sciences, Recep Tayyip Erdoğan University, Rize, Turkey
| | - Şengül Alpay Karaoğlu
- Department of Biology, Faculty of Arts and Sciences, Recep Tayyip Erdoğan University, Rize, Turkey.
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Hou S, Zheng N, Tang L, Ji X. Effects of cadmium and copper mixtures to carrot and pakchoi under greenhouse cultivation condition. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2018; 159:172-181. [PMID: 29751225 DOI: 10.1016/j.ecoenv.2018.04.060] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/07/2018] [Revised: 04/23/2018] [Accepted: 04/26/2018] [Indexed: 06/08/2023]
Abstract
A pot experiment was undertaken to investigate the effects of Cd and Cu mixtures to growth and nutrients (sugar, carotene or vitamin C) of carrot and pakchoi under greenhouse cultivation condition. The study included: (a) physical-chemical properties of soil and soil animals in response to Cd and Cu stress; (b) bioaccumulation of heavy metals, length, biomass, contents of sugar and carotene (vitamin C) of carrot and pakchoi; (c) estimation the effects of Cd and Cu mixtures by multivariate regression analysis. The results implied that heavy metals impacted negative influence on soil animals' abundance. The metals contents in plants increased obviously with Cd and Cu contamination in soil. The biomass production and nutrients declined with Cd and Cu contents increasing. Cd (20 mg kg-1) treatment caused maximum reduction of sugar content (45.29%) in carrot root; maximum reduction in carotene content (75.73%) in carrot, 75.1% sugar content reduction and 70.58% vitamin C content reduction in pakchoi shoots were observed with addition of Cd (20 mg kg-1) and Cu (400 mg kg-1) mixture. The results of multivariate regression analysis indicated that combination of Cd and Cu exerts negative effects to both carrot and pakchoi, and both growth and nutrients were negatively correlated with metals concentrations. It is concluded that the Cd and Cu mixtures caused toxic damage to vegetable plants as Cd and Cu gradient concentrations increased.
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Affiliation(s)
- Shengnan Hou
- Northeast Institute of Geography and Agricultural Ecology, Chinese Academy of Sciences, Changchun, Jilin, China; University of Chinese Academy of Sciences, Beijing, China
| | - Na Zheng
- Northeast Institute of Geography and Agricultural Ecology, Chinese Academy of Sciences, Changchun, Jilin, China; The College of Environment and Resources, Jilin University, China.
| | - Lin Tang
- Northeast Institute of Geography and Agricultural Ecology, Chinese Academy of Sciences, Changchun, Jilin, China; The College of Environment and Resources, Jilin University, China
| | - Xiaofeng Ji
- Northeast Institute of Geography and Agricultural Ecology, Chinese Academy of Sciences, Changchun, Jilin, China; University of Chinese Academy of Sciences, Beijing, China
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Cao Y, Zhang Y, Ma C, Li H, Zhang J, Chen G. Growth, physiological responses, and copper accumulation in seven willow species exposed to Cu-a hydroponic experiment. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2018; 25:19875-19886. [PMID: 29737488 DOI: 10.1007/s11356-018-2106-z] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2018] [Accepted: 04/23/2018] [Indexed: 06/08/2023]
Abstract
Selecting plant species, especially woody species, that can tolerate and accumulate high levels of heavy metals is crucial for the purpose of phytoremediation. In the present study, seven willow species/clones were evaluated for their variations in copper (Cu) tolerance, Cu accumulation, and their relative physiological responses, when exposed to different doses of Cu (control, 15, and 120 μM) in a hydroponic system for 40 days. Upon Cu exposure, all tested willow species/clones (Salix, S.) remained relative normal growth, albeit with some visual evidence of Cu toxicity observed. Seven willow species remained relative high total biomass with tolerance index > 0.6 when being exposed to 120 μM Cu, suggesting their high Cu tolerance. Exposure to 120 μM Cu resulted in notable declines (16.3-76.1%) in photosynthesis in all willow species. Increases in the soluble sugar content and decreases in the soluble protein content in the leaves of five willow species (S. integra "Yizhibi", S. jiangsuensis "J172", S. matsudana 14, S. matsudana 25, S. matsudana 89) were found in the 120 μM Cu treatment. The majority of Cu mainly accumulated in the roots, ranging from 1916 to 26,244 mg kg-1 DW. Principal component analysis and membership function analysis suggested that S. matsudana 89 and S. matsudana 25 showed much higher biomass and accumulation ability than the other species. This suggests that these two willow clones could be used as potential candidates for the phytostabilization of Cu in contaminated soils.
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Affiliation(s)
- Yini Cao
- Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Fuyang, Hangzhou, 311400, China
| | - Ying Zhang
- Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Fuyang, Hangzhou, 311400, China
- College of Landscape Architecture and Forestry, Qingdao Agricultural University, Chengyang, Qingdao, 266109, China
| | - Chuanxin Ma
- Department of Analytical Chemistry, The Connecticut Agricultural Experiment Station, New Haven, CT, 06504, USA
| | - Haimei Li
- College of Landscape Architecture and Forestry, Qingdao Agricultural University, Chengyang, Qingdao, 266109, China.
| | - Jianfeng Zhang
- Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Fuyang, Hangzhou, 311400, China
| | - Guangcai Chen
- Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Fuyang, Hangzhou, 311400, China.
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Aparicio JD, Raimondo EE, Gil RA, Benimeli CS, Polti MA. Actinobacteria consortium as an efficient biotechnological tool for mixed polluted soil reclamation: Experimental factorial design for bioremediation process optimization. JOURNAL OF HAZARDOUS MATERIALS 2018; 342:408-417. [PMID: 28854393 DOI: 10.1016/j.jhazmat.2017.08.041] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2017] [Revised: 08/01/2017] [Accepted: 08/14/2017] [Indexed: 06/07/2023]
Abstract
The objective of the present work was to establish optimal biological and physicochemical parameters in order to remove simultaneously lindane and Cr(VI) at high and/or low pollutants concentrations from the soil by an actinobacteria consortium formed by Streptomyces sp. M7, MC1, A5, and Amycolatopsis tucumanensis AB0. Also, the final aim was to treat real soils contaminated with Cr(VI) and/or lindane from the Northwest of Argentina employing the optimal biological and physicochemical conditions. In this sense, after determining the optimal inoculum concentration (2gkg-1), an experimental design model with four factors (temperature, moisture, initial concentration of Cr(VI) and lindane) was employed for predicting the system behavior during bioremediation process. According to response optimizer, the optimal moisture level was 30% for all bioremediation processes. However, the optimal temperature was different for each situation: for low initial concentrations of both pollutants, the optimal temperature was 25°C; for low initial concentrations of Cr(VI) and high initial concentrations of lindane, the optimal temperature was 30°C; and for high initial concentrations of Cr(VI), the optimal temperature was 35°C. In order to confirm the model adequacy and the validity of the optimization procedure, experiments were performed in six real contaminated soils samples. The defined actinobacteria consortium reduced the contaminants concentrations in five of the six samples, by working at laboratory scale and employing the optimal conditions obtained through the factorial design.
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Affiliation(s)
- Juan Daniel Aparicio
- Planta Piloto de Procesos Industriales Microbiológicos (PROIMI), CONICET, Av. Belgrano y Pasaje Caseros, 4000 Tucumán, Argentina; Facultad de Bioquímica, Química y Farmacia, Universidad Nacional de Tucumán, Ayacucho 491, 4000 Tucumán, Argentina
| | - Enzo Emanuel Raimondo
- Planta Piloto de Procesos Industriales Microbiológicos (PROIMI), CONICET, Av. Belgrano y Pasaje Caseros, 4000 Tucumán, Argentina
| | - Raúl Andrés Gil
- Instituto de Química de San Luis, INQUISAL (UNSL-CONICET), Universidad Nacional de San Luis, Chacabuco y Pedernera, 5700 San Luis, Argentina
| | - Claudia Susana Benimeli
- Planta Piloto de Procesos Industriales Microbiológicos (PROIMI), CONICET, Av. Belgrano y Pasaje Caseros, 4000 Tucumán, Argentina; Facultad de Ciencias Exactas y Naturales, Universidad Nacional de Catamarca, Av. Belgrano 300, 4700 Catamarca, Argentina
| | - Marta Alejandra Polti
- Planta Piloto de Procesos Industriales Microbiológicos (PROIMI), CONICET, Av. Belgrano y Pasaje Caseros, 4000 Tucumán, Argentina; Facultad de Ciencias Naturales e Instituto Miguel Lillo, Universidad Nacional de Tucumán, Miguel Lillo 205, 4000 Tucumán, Argentina.
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Rasuk MC, Ferrer GM, Kurth D, Portero LR, Farías ME, Albarracín VH. UV-Resistant Actinobacteria from High-Altitude Andean Lakes: Isolation, Characterization and Antagonistic Activities. Photochem Photobiol 2017; 93:865-880. [DOI: 10.1111/php.12759] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2016] [Accepted: 03/03/2017] [Indexed: 11/27/2022]
Affiliation(s)
- María Cecilia Rasuk
- Planta Piloto de Procesos Industriales y Microbiológicos (PROIMI); CCT; CONICET; S. M. de Tucumán Argentina
| | - Gabriela Mónica Ferrer
- Planta Piloto de Procesos Industriales y Microbiológicos (PROIMI); CCT; CONICET; S. M. de Tucumán Argentina
| | - Daniel Kurth
- Planta Piloto de Procesos Industriales y Microbiológicos (PROIMI); CCT; CONICET; S. M. de Tucumán Argentina
| | - Luciano Raúl Portero
- Planta Piloto de Procesos Industriales y Microbiológicos (PROIMI); CCT; CONICET; S. M. de Tucumán Argentina
| | - María Eugenia Farías
- Planta Piloto de Procesos Industriales y Microbiológicos (PROIMI); CCT; CONICET; S. M. de Tucumán Argentina
| | - Virginia Helena Albarracín
- Planta Piloto de Procesos Industriales y Microbiológicos (PROIMI); CCT; CONICET; S. M. de Tucumán Argentina
- Facultad de Ciencias Naturales e Instituto Miguel Lillo; Universidad Nacional de Tucumán; Tucumán Argentina
- Centro Integral de Microscopía Electrónica; CCT-Tucumán; CONICET; Universidad Nacional de Tucumán; Tucumán Argentina
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11
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Sun L, Cao X, Li M, Zhang X, Li X, Cui Z. Enhanced bioremediation of lead-contaminated soil by Solanum nigrum L. with Mucor circinelloides. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2017; 24:9681-9689. [PMID: 28251531 DOI: 10.1007/s11356-017-8637-x] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/11/2016] [Accepted: 02/13/2017] [Indexed: 06/06/2023]
Abstract
Strain selected from mine tailings in Anshan for Pb bioremediation was characterized at the genetic level by internal transcribed spacer (ITS) sequencing. Results revealed that the strain belongs to Mucor circinelloides. Bioremediation of lead-contaminated soil was conducted using Solanum nigrum L. combined with M. circinelloides. The removal efficacy was in the order microbial/phytoremediation > phytoremediation > microbial remediation > control. The bioremediation rates were 58.6, 47.2, and 40.2% in microbial/phytoremediation, microbial remediation, and phytoremediation groups, respectively. Inoculating soil with M. circinelloides enhanced Pb removal and S. nigrum L. growth. The bioaccumulation factor (BF, 1.43), enrichment factor (EF, 1.56), and translocation factor (TF, 1.35) were higher than unit, suggesting an efficient ability of S. nigrum L. in Pb bioremediation. Soil fertility was increased after bioremediation according to change in enzyme activities. The results indicated that inoculating S. nigrum L. with M. circinelloides enhanced its efficiency for phytoremediation of soil contaminated with Pb.
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Affiliation(s)
- Liqun Sun
- School of Environmental Science and Engineering, Shandong University, Ji'nan, 250100, China
| | - Xiufeng Cao
- Weifang University of Science and Technology, Shouguang, 262700, China
| | - Min Li
- School of Environmental Science and Engineering, Shandong University, Ji'nan, 250100, China
| | - Xu Zhang
- School of Environmental Science and Engineering, Shandong University, Ji'nan, 250100, China
| | - Xinxin Li
- School of Environmental Science and Engineering, Shandong University, Ji'nan, 250100, China
| | - Zhaojie Cui
- School of Environmental Science and Engineering, Shandong University, Ji'nan, 250100, China.
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12
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Brunetto G, Bastos de Melo GW, Terzano R, Del Buono D, Astolfi S, Tomasi N, Pii Y, Mimmo T, Cesco S. Copper accumulation in vineyard soils: Rhizosphere processes and agronomic practices to limit its toxicity. CHEMOSPHERE 2016; 162:293-307. [PMID: 27513550 DOI: 10.1016/j.chemosphere.2016.07.104] [Citation(s) in RCA: 78] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2016] [Revised: 07/28/2016] [Accepted: 07/31/2016] [Indexed: 05/23/2023]
Abstract
Viticulture represents an important agricultural practice in many countries worldwide. Yet, the continuous use of fungicides has caused copper (Cu) accumulation in soils, which represent a major environmental and toxicological concern. Despite being an important micronutrient, Cu can be a potential toxicant at high concentrations since it may cause morphological, anatomical and physiological changes in plants, decreasing both food productivity and quality. Rhizosphere processes can, however, actively control the uptake and translocation of Cu in plants. In particular, root exudates affecting the chemical, physical and biological characteristics of the rhizosphere, might reduce the availability of Cu in the soil and hence its absorption. In addition, this review will aim at discussing the advantages and disadvantages of agronomic practices, such as liming, the use of pesticides, the application of organic matter, biochar and coal fly ashes, the inoculation with bacteria and/or mycorrhizal fungi and the intercropping, in alleviating Cu toxicity symptoms.
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Affiliation(s)
- Gustavo Brunetto
- Departament of Soil Science, Federal University of Santa Maria, 97105-900, Santa Maria, Rio Grande do Sul, Brazil
| | - George Wellington Bastos de Melo
- National Research Center of Grape and Wine (Centro Nacional de Pesquisa de Uva e Vinho - CNPUV), Brazilian Agricultural Research Corporation (Empresa Brasileira de Pesquisa Agropecuária - Embrapa), Bento Gonçalves, Rio Grande do Sul, CEP: 95700-000, Brazil
| | - Roberto Terzano
- Dipartimento di Scienze del Suolo, della Pianta e degli Alimenti, University of Bari "Aldo Moro", I-70126, Bari, Italy
| | - Daniele Del Buono
- Dipartimento di Scienze Agrarie, Alimentari e Ambientali, Università degli Studi di Perugia, Borgo XX Giugno 74, 06121 Perugia, Italy
| | - Stefania Astolfi
- Department of Agricultural and Forestry Sciences (DAFNE), Università della Tuscia, Viterbo, I-01100, Italy
| | - Nicola Tomasi
- Dipartimento di Scienze Agrarie e Ambientali, University of Udine, I-33100, Udine, Italy
| | - Youry Pii
- Faculty of Science and Technology, Free University of Bolzano, Piazza Università 5, 39100, Bolzano, Italy
| | - Tanja Mimmo
- Faculty of Science and Technology, Free University of Bolzano, Piazza Università 5, 39100, Bolzano, Italy.
| | - Stefano Cesco
- Faculty of Science and Technology, Free University of Bolzano, Piazza Università 5, 39100, Bolzano, Italy
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Bourguignon N, Bargiela R, Rojo D, Chernikova TN, de Rodas SAL, García-Cantalejo J, Näther DJ, Golyshin PN, Barbas C, Ferrero M, Ferrer M. Insights into the degradation capacities of Amycolatopsis tucumanensis DSM 45259 guided by microarray data. World J Microbiol Biotechnol 2016; 32:201. [PMID: 27785708 DOI: 10.1007/s11274-016-2163-8] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2016] [Accepted: 10/18/2016] [Indexed: 10/20/2022]
Abstract
The analysis of catabolic capacities of microorganisms is currently often achieved by cultivation approaches and by the analysis of genomic or metagenomic datasets. Recently, a microarray system designed from curated key aromatic catabolic gene families and key alkane degradation genes was designed. The collection of genes in the microarray can be exploited to indicate whether a given microbe or microbial community is likely to be functionally connected with certain degradative phenotypes, without previous knowledge of genome data. Herein, this microarray was applied to capture new insights into the catabolic capacities of copper-resistant actinomycete Amycolatopsis tucumanensis DSM 45259. The array data support the presumptive ability of the DSM 45259 strain to utilize single alkanes (n-decane and n-tetradecane) and aromatics such as benzoate, phthalate and phenol as sole carbon sources, which was experimentally validated by cultivation and mass spectrometry. Interestingly, while in strain DSM 45259 alkB gene encoding an alkane hydroxylase is most likely highly similar to that found in other actinomycetes, the genes encoding benzoate 1,2-dioxygenase, phthalate 4,5-dioxygenase and phenol hydroxylase were homologous to proteobacterial genes. This suggests that strain DSM 45259 contains catabolic genes distantly related to those found in other actinomycetes. Together, this study not only provided new insight into the catabolic abilities of strain DSM 45259, but also suggests that this strain contains genes uncommon within actinomycetes.
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Affiliation(s)
- Natalia Bourguignon
- Planta Piloto de Procesos Industriales Microbiológicos (PROIMI-CONICET), Tucumán, Argentina
| | - Rafael Bargiela
- Consejo Superior de Investigaciones Científicas (CSIC), Institute of Catalysis, Madrid, Spain
| | - David Rojo
- Centro de Metabolómica y Bioanálisis (CEMBIO), Facultad de Farmacia, Universidad CEU San Pablo, Campus Monteprincipe, Boadilla del Monte, Madrid, Spain
| | | | - Sara A López de Rodas
- Unidad de Genómica-Campus Moncloa, C.A.I. Genómica y Proteómica, Facultad CC. Biológicas, Universidad Complutense de Madrid, Madrid, Spain
| | - Jesús García-Cantalejo
- Unidad de Genómica-Campus Moncloa, C.A.I. Genómica y Proteómica, Facultad CC. Biológicas, Universidad Complutense de Madrid, Madrid, Spain
| | - Daniela J Näther
- Institute for Microbiology, Biocentre, Goethe University, Frankfurt, Germany
| | - Peter N Golyshin
- School of Biological Sciences, Bangor University, Gwynedd, LL57 2UW, UK
| | - Coral Barbas
- Centro de Metabolómica y Bioanálisis (CEMBIO), Facultad de Farmacia, Universidad CEU San Pablo, Campus Monteprincipe, Boadilla del Monte, Madrid, Spain
| | - Marcela Ferrero
- Planta Piloto de Procesos Industriales Microbiológicos (PROIMI-CONICET), Tucumán, Argentina
| | - Manuel Ferrer
- Consejo Superior de Investigaciones Científicas (CSIC), Institute of Catalysis, Madrid, Spain.
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Besaury L, Pawlak B, Quillet L. Expression of copper-resistance genes in microbial communities under copper stress and oxic/anoxic conditions. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2016; 23:4013-4023. [PMID: 25009094 DOI: 10.1007/s11356-014-3254-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/08/2014] [Accepted: 06/24/2014] [Indexed: 06/03/2023]
Abstract
Microorganisms have developed copper-resistance mechanisms in order to survive in contaminated environments. The abundance and expression of the copper-resistance genes cusA and copA, encoding respectively for a Resistance Cell Nodulation protein and for a P-type ATP-ase pump, was assessed along a gradient of copper concentration in microcosms prepared from Seine estuary mudflat sediment. We demonstrated that the abundance of copA and cusA genes decreased with the increase of copper concentration and that cusA gene was up to ten times higher than the copA gene. Only the copA gene was expressed in both oxic and anoxic conditions. The abundance and activity of the microbial community remained constant whatever the concentrations of copper along the gradient. The molecular phylogeny of the two copper-resistance genes was studied and revealed that the increase of copper increased the diversity of copA and cusA gene sequences.
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Affiliation(s)
- Ludovic Besaury
- Laboratoire de Microbiologie Signaux et Microenvironnement, EA 4312, Bâtiment IRESE B, 2ème étage, UFR des Sciences, Université de Rouen, 76821, Mont Saint Aignan, France.
| | - Barbara Pawlak
- Laboratoire de Microbiologie Signaux et Microenvironnement, EA 4312, Bâtiment IRESE B, 2ème étage, UFR des Sciences, Université de Rouen, 76821, Mont Saint Aignan, France
| | - Laurent Quillet
- Laboratoire de Microbiologie Signaux et Microenvironnement, EA 4312, Bâtiment IRESE B, 2ème étage, UFR des Sciences, Université de Rouen, 76821, Mont Saint Aignan, France
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15
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Aparicio J, Solá MZS, Benimeli CS, Amoroso MJ, Polti MA. Versatility of Streptomyces sp. M7 to bioremediate soils co-contaminated with Cr(VI) and lindane. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2015; 116:34-39. [PMID: 25749405 DOI: 10.1016/j.ecoenv.2015.02.036] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2014] [Revised: 02/20/2015] [Accepted: 02/25/2015] [Indexed: 06/04/2023]
Abstract
The aim of this work was to study the impact of environmental factors on the bioremediation of Cr(VI) and lindane contaminated soil, by an actinobacterium, Streptomyces sp. M7, in order to optimize the process. Soil samples were contaminated with 25 µg kg(-1) of lindane and 50 mg kg(-1) of Cr(VI) and inoculated with Streptomyces sp. M7. The lowest inoculum concentration which simultaneously produced highest removal of Cr(VI) and lindane was 1 g kg(-1). The influence of physical and chemical parameters was assessed using a full factorial design. The factors and levels tested were: Temperature: 25, 30, 35°C; Humidity: 10%, 20%, 30%; Initial Cr(VI) concentration: 20, 50, 80 mg kg(-1); Initial lindane concentration: 10, 25, 40 µg kg(-1). Streptomyces sp. M7 exhibited strong versatility, showing the ability to bioremediate co-contaminated soil samples at several physicochemical conditions. Streptomyces sp. M7 inoculum size was optimized. Also, it was fitted a model to study this process, and it was possible to predict the system performance, knowing the initial conditions. Moreover, optimum temperature and humidity conditions for the bioremediation of soil with different concentrations of Cr(VI) and lindane were determined. Lettuce seedlings were a suitable biomarker to evaluate the contaminants mixture toxicity. Streptomyces sp. M7 carried out a successful bioremediation, which was demonstrated through ecotoxicity test with Lactuca sativa.
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Affiliation(s)
- JuanDaniel Aparicio
- Planta Piloto de Procesos Industriales Microbiológicos (PROIMI), CONICET. Av. Belgrano y Pasaje Caseros. 4000 Tucumán, Argentina; Facultad de Bioquímica, Química y Farmacia, Universidad Nacional de Tucumán. Ayacucho 491, 4000 Tucumán, Argentina
| | - María Zoleica Simón Solá
- Planta Piloto de Procesos Industriales Microbiológicos (PROIMI), CONICET. Av. Belgrano y Pasaje Caseros. 4000 Tucumán, Argentina; Facultad de Bioquímica, Química y Farmacia, Universidad Nacional de Tucumán. Ayacucho 491, 4000 Tucumán, Argentina
| | - Claudia Susana Benimeli
- Unidad de Administración Territorial, Centro Científico Tecnológico, CCT-CONICET-Tucumán, Crisóstomo Álvarez 722, 4000 Tucumán, Argentina; Universidad del Norte Santo Tomás de Aquino (UNSTA), 4000 Tucumán, Argentina; Facultad de Ciencias Exactas y Naturales, Universidad Nacional de Catamarca. Esquiú 799, 4700 Catamarca, Argentina
| | - María Julia Amoroso
- Planta Piloto de Procesos Industriales Microbiológicos (PROIMI), CONICET. Av. Belgrano y Pasaje Caseros. 4000 Tucumán, Argentina; Facultad de Bioquímica, Química y Farmacia, Universidad Nacional de Tucumán. Ayacucho 491, 4000 Tucumán, Argentina; Universidad del Norte Santo Tomás de Aquino (UNSTA), 4000 Tucumán, Argentina
| | - Marta Alejandra Polti
- Planta Piloto de Procesos Industriales Microbiológicos (PROIMI), CONICET. Av. Belgrano y Pasaje Caseros. 4000 Tucumán, Argentina; Facultad de Ciencias Naturales e Instituto Miguel Lillo, Universidad Nacional de Tucumán. Miguel Lillo 205, 4000 Tucumán, Argentina.
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16
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Huguenot D, Bois P, Cornu JY, Jezequel K, Lollier M, Lebeau T. Remediation of sediment and water contaminated by copper in small-scaled constructed wetlands: effect of bioaugmentation and phytoextraction. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2015; 22:721-732. [PMID: 25106519 DOI: 10.1007/s11356-014-3406-6] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2014] [Accepted: 07/30/2014] [Indexed: 06/03/2023]
Abstract
The use of plants and microorganisms to mitigate sediment contaminated by copper was studied in microcosms that mimic the functioning of a stormwater basin (SWB) connected to vineyard watershed. The impact of phytoremediation and bioaugmentation with siderophore-producing bacteria on the fate of Cu was studied in two contrasted (batch vs. semi-continuous) hydraulic regimes. The fate of copper was characterised following its discharge at the outlet of the microcosms, its pore water concentration in the sediment, the assessment of its bioaccessible fraction in the rhizosphere and the measurement of its content in plant tissues. Physico-chemical (pH, redox potential) and biological parameters (total heterotrophic bacteria) were also monitored. As expected, the results showed a clear impact of the hydraulic regime on the redox potential and thus on the pore water concentration of Cu. Copper in pore water was also dependent on the frequency of Cu-polluted water discharges. Repeated bioaugmentation increased the total heterotrophic microflora as well as the Cu bioaccessibility in the rhizosphere and increased the amount of Cu extracted by Phragmites australis by a factor of ~2. Sugar beet pulp, used as a filter to avoid copper flushing, retained 20% of outcoming Cu and led to an overall retention of Cu higher than 94% when arranged at the outlet of microcosms. Bioaugmentation clearly improved the phytoextraction rate of Cu in a small-scaled SWB designed to mimic the functioning of a full-size SWB connected to vineyard watershed. Highlights: Cu phytoextraction in constructed wetlands much depends on the hydraulic regime and on the frequency of Cu-polluted water discharges. Cu phytoextraction increases with time and plant density. Cu bioaccessibility can be increased by bioaugmentation with siderophore-producing bacteria.
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Affiliation(s)
- D Huguenot
- Equipe Dépollution Biologique des Sols, Université de Haute Alsace, EA 3991 LVBE (Laboratoire Vigne Biotechnologies et Environnement), 33 rue de Herrlisheim, BP 50568 68008, Colmar, France,
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17
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Teixeira C, Almeida CMR, Nunes da Silva M, Bordalo AA, Mucha AP. Development of autochthonous microbial consortia for enhanced phytoremediation of salt-marsh sediments contaminated with cadmium. THE SCIENCE OF THE TOTAL ENVIRONMENT 2014; 493:757-765. [PMID: 25000571 DOI: 10.1016/j.scitotenv.2014.06.040] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/10/2014] [Revised: 06/10/2014] [Accepted: 06/11/2014] [Indexed: 06/03/2023]
Abstract
UNLABELLED Microbial assisted phytoremediation is a promising, though yet poorly explored, new remediation technique. The aim of this study was to develop autochthonous microbial consortia resistant to cadmium that could enhance phytoremediation of salt-marsh sediments contaminated with this metal. The microbial consortia were selectively enriched from rhizosediments colonized by Juncus maritimus and Phragmites australis. The obtained consortia presented similar microbial abundance but a fairly different community structure, showing that the microbial community was a function of the sediment from which the consortia were enriched. The effect of the bioaugmentation with the developed consortia on cadmium uptake, and the microbial community structure associated to the different sediments were assessed using a microcosm experiment. Our results showed that the addition of the cadmium resistant microbial consortia increased J. maritimus metal phytostabilization capacity. On the other hand, in P. australis, microbial consortia amendment promoted metal phytoextraction. The addition of the consortia did not alter the bacterial structure present in the sediments at the end of the experiments. This study provides new evidences that the development of autochthonous microbial consortia for enhanced phytoremediation of salt-marsh sediments contaminated with cadmium might be a simple, efficient, and environmental friendly remediation procedure. CAPSULE ABSTRACT Development of autochthonous microbial consortia resistant to cadmium that enhanced phytoremediation by salt-marsh plants, without a long term effect on sediment bacterial diversity.
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Affiliation(s)
- Catarina Teixeira
- Centro Interdisciplinar de Investigação Marinha e Ambiental (CIIMAR/CIMAR), Universidade do Porto, Rua dos Bragas, 289, 4050-123 Porto, Portugal; Laboratório de Hidrobiologia e Ecologia, Instituto de Ciências Biomédicas Abel Salazar (ICBAS), Universidade do Porto, Rua Jorge Viterbo Ferreira, 228, 4050-313 Porto, Portugal
| | - C Marisa R Almeida
- Centro Interdisciplinar de Investigação Marinha e Ambiental (CIIMAR/CIMAR), Universidade do Porto, Rua dos Bragas, 289, 4050-123 Porto, Portugal
| | - Marta Nunes da Silva
- Centro Interdisciplinar de Investigação Marinha e Ambiental (CIIMAR/CIMAR), Universidade do Porto, Rua dos Bragas, 289, 4050-123 Porto, Portugal
| | - Adriano A Bordalo
- Centro Interdisciplinar de Investigação Marinha e Ambiental (CIIMAR/CIMAR), Universidade do Porto, Rua dos Bragas, 289, 4050-123 Porto, Portugal; Laboratório de Hidrobiologia e Ecologia, Instituto de Ciências Biomédicas Abel Salazar (ICBAS), Universidade do Porto, Rua Jorge Viterbo Ferreira, 228, 4050-313 Porto, Portugal
| | - Ana P Mucha
- Centro Interdisciplinar de Investigação Marinha e Ambiental (CIIMAR/CIMAR), Universidade do Porto, Rua dos Bragas, 289, 4050-123 Porto, Portugal.
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18
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Dávila Costa JS, Amoroso MJ. Current biotechnological applications of the genus Amycolatopsis. World J Microbiol Biotechnol 2014; 30:1919-26. [PMID: 24557749 DOI: 10.1007/s11274-014-1622-3] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2013] [Accepted: 02/08/2014] [Indexed: 01/07/2023]
Abstract
Recently there has been increasing interest in possible biotechnological applications of the bacterial genus Amycolatopsis. This genus originally attracted attention for its antibiotic producing capabilities; although it is actually a multifaceted genus and a more diverse range of studies involving biotechnological processes have now been undertaken. Several works have demonstrated that the versatility shown by these bacteria is valuable in industrial applications. Here, we provide a condensed overview of the most important biotechnological applications such as bioremediation, biodegradation and bioconversion, as well as aspects that need to be explored further in order to gain a fuller insight into this genus, including its possible potential in the production of biofuel. Antibiotic production is not discussed since this is well covered by the latest edition of Bergey's Manual of Systematic Bacteriology. To our knowledge this is the first report highlighting the versatility and biotechnological potential of the genus Amycolatopsis.
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Affiliation(s)
- José Sebastián Dávila Costa
- Regional Center of Research and Scientific-Technological Development (CRIDECIT), National University of Patagonia San Juan Bosco, km 4-Ciudad Universitaria, 9000, Comodoro Rivadavia, Chubut, Argentina,
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19
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Tiwari S, Singh SN, Garg SK. Stimulated phytoextraction of metals from fly ash by microbial interventions. ENVIRONMENTAL TECHNOLOGY 2012; 33:2405-2413. [PMID: 23393983 DOI: 10.1080/09593330.2012.670269] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
Various combinations of fly ash tolerant bacteria isolated from the rhizospheric zone of Typha latifolia naturally growing on a fly ash dump site were tested for enhanced metal uptake by Brassica juncea grown in fly ash amended with press mud. After enrichment of the bacteria in a nutrient broth, they were subsequently applied to the rhizospheric zone of B. juncea in different combinations. When the metal analysis was done in the plants at their maturity, it was revealed that out of 11 bacterial consortia prepared from the different combinations of four bacterial strains, Micrococcus roseus NBRFT2 (MTCC 9018), Bacillus endophyticus NBRFT4 (MTCC 9021), Paenibacillus macerans NBRFT5 (MTCC 8912) and Bacillus pumilus NBRFT9 (MTCC 8913), a combination of NBRFT5, NBRFT4 and NBRFT9 (ST3) was found to have induced the highest metal accumulations as compared to other consortia. The bioaugmentation of the ST3 consortium enhanced Fe accumulation by 247%, Ni by 231% and Zn by 223% in B. juncea as compared to control plants. These values were found to be significantly higher than the other bacterial consortia. Bacteria were also found to produce siderophores which could enhance the metal uptake by plants through metal mobilization. Besides siderophores, bacteria are also known to produce protons, organic acids and enzymes which enhance the metal mobilization and boost the phytoextraction process. The translocation of metals from root to stem was invariably higher than from stem to leaf. Hence, ST3 was adjudged the best consortium to be used in the field application to accelerate the phytoextraction of metals from fly ash by B. juncea.
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Affiliation(s)
- Sadhna Tiwari
- National Botanical Research Institute (Council of Scientific and Industrial Research), Lucknow, Uttar Pradesh, India
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20
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Dávila Costa JS, Kothe E, Abate CM, Amoroso MJ. Unraveling the Amycolatopsis tucumanensis copper-resistome. Biometals 2012; 25:905-17. [DOI: 10.1007/s10534-012-9557-3] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2012] [Accepted: 05/01/2012] [Indexed: 01/07/2023]
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21
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Cai Z, Chen Q, Wang H, He Y, Wang W, Zhao X, Ye Q. Degradation of the novel herbicide ZJ0273 by Amycolatopsis sp. M3-1 isolated from soil. Appl Microbiol Biotechnol 2012; 96:1371-9. [PMID: 22249724 DOI: 10.1007/s00253-011-3867-1] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2011] [Revised: 12/19/2011] [Accepted: 12/22/2011] [Indexed: 11/30/2022]
Abstract
ZJ0273, propyl 4-(2-(4,6-dimethoxypyrimidin-2-yloxy) benzylamino) benzoate, is a novel and broad-spectrum herbicide. In this study, 15 bacteria capable of utilizing ZJ0273 as the sole carbon source were isolated from soil. One of the isolates belonged to the family Amycolatopsis and was designated to Amycolatopsis sp. M3-1; at 30°C and pH 7.0, degradation rate of ZJ0273 could reach at 59.3% and 68.5% in 25 days and 60 days, respectively. Furthermore, six metabolites (M1-M6) during the degradation of ZJ0273 by Amycolatopsis sp. M3-1 were identified by a combination with multi-position (14)C-labeled compounds (B-ZJ0273 and C-ZJ0273), chromatography, liquid scintillation spectrometer, and LC-MS, a novel pathway of ZJ0273 degradation by Amycolatopsis sp. M3-1 was proposed based on the identified metabolites and their biodegradation courses. ZJ0273 was initially hydrolyzed into M1 (4-(2-(4,6-dimethoxypyrimidin-2-yloxy) benzylamino) benzoic acid), then further oxidized into M3 (2-(4,6-dimethoxypyrimidin-2-yloxy) benzoic acid). M1 also could undergo a carbonylation into M2 (4-(2-(4,6-dimethoxypyrimidin-2-yloxy) benzamido) benzoic acid), and then its C-N and C-O bonds were cleaved to yield M3 (2-(4,6-dimethoxypyrimidin-2-yloxy) benzoic acid) and M4 (4,6-dimethoxypyrimidin-2-ol), respectively. Moreover, another two new metabolites, M5 (2-(4-hydroxy, 6-methoxypyrimidin-2-yloxy) benzoic acid) and M6 (2, 4-dihydroxy-pyrimidine) were found. M5 was formed through de-methyl of M3 and then hydrolyzed into M6.
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Affiliation(s)
- Zhiqiang Cai
- Institute of Nuclear Agricultural Sciences, Key Laboratory of Nuclear Agricultural Sciences of the Ministry of Agriculture, Zhejiang University, Hangzhou, 310029, China.
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Gąsecka M, Mleczek M, Drzewiceka K, Magdziak Z, Rissmann I, Chadzinikolau T, Golinski P. Physiological and morphological changes in Salix viminalis L. as a result of plant exposure to copper. JOURNAL OF ENVIRONMENTAL SCIENCE AND HEALTH. PART A, TOXIC/HAZARDOUS SUBSTANCES & ENVIRONMENTAL ENGINEERING 2012; 47:548-557. [PMID: 22375537 DOI: 10.1080/10934529.2012.650557] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
The aim of this study was to assess the response of Salix viminalis L. under model conditions to different copper concentrations and, as a consequence, potential application of the experimental results in decontamination of water with heavy metal ions (phytoaccumlation). The 14-day experiment was conducted on one-year-old cuttings of Salix viminalis L. 'Cannabina' exposed, in a phytotron, to six different copper levels in hydroponic pots. The results showed that the capacity to accumulate heavy metals was of the following order: roots > rods > shoots > leaves. The linear relationships between the accumulation efficiency of particular Salix parts were confirmed. Together with an increase in copper sorption in above-ground organs, a decrease was observed in root biomass and the length of roots, shoots and leaves. The release of low molecular weight organic acids into solution was different under various Cu levels. Glucose, fructose and sucrose contents in leaves of Salix in all treatments were higher than in control plants. Higher concentration of sugars (4 times higher compared to the control) was detected for fructose in a 2 mM Cu treatment. The total phenolics content rapidly increased only at 3 mM Cu level. Free and total salicylic acid and the glutathione contents in plants treated with copper in relation to the control were always higher and changed with increasing concentration of copper ions in the medium.
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Affiliation(s)
- Monika Gąsecka
- Department of Chemistry, Poznan University of Life Sciences, Poznan, Poland
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Dávila Costa JS, Albarracín VH, Abate CM. Responses of environmental Amycolatopsis strains to copper stress. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2011; 74:2020-2028. [PMID: 21764453 DOI: 10.1016/j.ecoenv.2011.06.017] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/23/2011] [Revised: 06/15/2011] [Accepted: 06/17/2011] [Indexed: 05/31/2023]
Abstract
Copper is a redox-active metal, which acts as a catalyst in the formation of Reactive Oxygen Species (ROS) encouraging oxidative stress. Protection against oxidants is intrinsic to every living cell; however, in stress conditions, cells are forced to increase and expand their antioxidative network. In this work, the novel copper-resistant strain Amycolatopsis tucumanensis and the copper-sensitive Amycolatopsis eurytherma were grown under copper increasing concentrations in order to elucidate the dissimilar effects of the metal on the strains viability, mainly on morphology and antioxidant capacity. Although biosorbed copper encouraged ROS production in a dose-dependent manner in both strains, the increase in ROS production from the basal level to the stress conditions in A. tucumanensis is lesser than in the copper-sensitive strain; likewise, in presence of copper A. eurytherma suffered inexorable morphological alteration while A. tucumanensis was not affected. The levels of antioxidant enzymes and metallothioneins (MT) were all greater in A. tucumanensis than in A. eurytherma; in addition MT levels as well as superoxide dismutase and thioredoxin reductase activities in A. tucumanensis, were higher as higher the concentration of copper in the culture medium. This work has given evidence that an efficient antioxidant defense system might aid microorganisms to survive in copper-stress conditions; besides it constitutes the first report of oxidative stress study in the genus Amycolatopsis and contributes to enlarge the knowledge on the copper-resistance mechanisms of A. tucumanensis.
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Affiliation(s)
- José Sebastián Dávila Costa
- Pilot Plant of Industrial and Microbiological Processes, CONICET. Av. Belgrano y Pasaje Caseros, 4000 Tucumán, Argentina.
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