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Maglione G, Zinno P, Tropea A, Mussagy CU, Dufossé L, Giuffrida D, Mondello A. Microbes' role in environmental pollution and remediation: a bioeconomy focus approach. AIMS Microbiol 2024; 10:723-755. [PMID: 39219757 PMCID: PMC11362270 DOI: 10.3934/microbiol.2024033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2024] [Revised: 08/07/2024] [Accepted: 08/20/2024] [Indexed: 09/04/2024] Open
Abstract
Bioremediation stands as a promising solution amid the escalating challenges posed by environmental pollution. Over the past 25 years, the influx of synthetic chemicals and hazardous contaminants into ecosystems has required innovative approaches for mitigation and restoration. The resilience of these compounds stems from their non-natural existence, distressing both human and environmental health. Microbes take center stage in this scenario, demonstrating their ability of biodegradation to catalyze environmental remediation. Currently, the scientific community supports a straight connection between biorefinery and bioremediation concepts to encourage circular bio/economy practices. This review aimed to give a pre-overview of the state of the art regarding the main microorganisms employed in bioremediation processes and the different bioremediation approaches applied. Moreover, focus has been given to the implementation of bioremediation as a novel approach to agro-industrial waste management, highlighting how it is possible to reduce environmental pollution while still obtaining value-added products with commercial value, meeting the goals of a circular bioeconomy. The main drawbacks and challenges regarding the feasibility of bioremediation were also reported.
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Affiliation(s)
- Giuseppe Maglione
- Institute for the Animal Production System in the Mediterranean Environment (ISPAAM), National Research Council, Piazzale Enrico Fermi 1, 80055 Portici, Italy
| | - Paola Zinno
- Institute for the Animal Production System in the Mediterranean Environment (ISPAAM), National Research Council, Piazzale Enrico Fermi 1, 80055 Portici, Italy
| | - Alessia Tropea
- Messina Institute of Technology c/o Department of Chemical, Biological, Pharmaceutical and Environmental Sciences, former Veterinary School, University of Messina, Viale G. Palatucci snc 98168–Messina, Italy
| | - Cassamo U. Mussagy
- Escuela de Agronomía, Facultad de Ciencias Agronómicas y de los Alimentos, Pontificia Universidad Católica de Valparaíso, Quillota 2260000, Chile
| | - Laurent Dufossé
- CHEMBIOPRO Laboratoire de Chimie et Biotechnologie des Produits Naturels, ESIROI Agroalimentaire, Université de La Réunion, 15 Avenue René Cassin, F-97400 Saint-Denis, Ile de La Réunion, France
| | - Daniele Giuffrida
- Department of Biomedical, Dental, Morphological and Functional Imaging Sciences, University of Messina, Via Consolare Valeria, 98125 Messina, Italy
| | - Alice Mondello
- Department of Economics, University of Messina, Via dei Verdi, 75, 98122 Messina, Italy
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Guo K, Yan L, He Y, Li H, Lam SS, Peng W, Sonne C. Phytoremediation as a potential technique for vehicle hazardous pollutants around highways. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023; 322:121130. [PMID: 36693585 DOI: 10.1016/j.envpol.2023.121130] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/27/2022] [Revised: 01/14/2023] [Accepted: 01/19/2023] [Indexed: 06/17/2023]
Abstract
With the synchronous development of highway construction and the urban economy, automobiles have entered thousands of households as essential means of transportation. This paper reviews the latest research progress in using phytoremediation technology to remediate the environmental pollution caused by automobile exhaust in recent years, including the prospects for stereoscopic forestry. Currently, most automobiles on the global market are internal combustion vehicles using fossil energy sources as the primary fuel, such as gasoline, diesel, and liquid or compressed natural gas. The composition of vehicle exhaust is relatively complex. When it enters the atmosphere, it is prone to a series of chemical reactions to generate various secondary pollutants, which are very harmful to human beings, plants, animals, and the eco-environment. Despite improving the automobile fuel quality and installing exhaust gas purification devices, helping to reduce air pollution, the treatment costs of these approaches are expensive and cannot achieve zero emissions of automobile exhaust pollutants. The purification of vehicle exhaust by plants is a crucial way to remediate the environmental pollution caused by automobile exhaust and improve the environment along the highway by utilizing the ecosystem's self-regulating ability. Therefore, it has become a global trend to use phytoremediation technology to restore the automobile exhaust pollution. Now, there is no scientific report or systematic review about how plants absorb vehicle pollutants. The screening and configuration of suitable plant species is the most crucial aspect of successful phytoremediation. The mechanisms of plant adsorption, metabolism, and detoxification are reviewed in this paper to address the problem of automobile exhaust pollution.
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Affiliation(s)
- Kang Guo
- Henan Province Engineering Research Center for Biomass Value-added Products, School of Forestry, Henan Agricultural University, Zhengzhou, 450002, China
| | - Lijun Yan
- Henan Province Engineering Research Center for Biomass Value-added Products, School of Forestry, Henan Agricultural University, Zhengzhou, 450002, China
| | - Yifeng He
- Henan Province Engineering Research Center for Biomass Value-added Products, School of Forestry, Henan Agricultural University, Zhengzhou, 450002, China
| | - Hanyin Li
- Henan Province Engineering Research Center for Biomass Value-added Products, School of Forestry, Henan Agricultural University, Zhengzhou, 450002, China
| | - Su Shiung Lam
- Higher Institution Centre of Excellence (HICoE), Institute of Tropical Aquaculture and Fisheries (AKUATROP), Universiti Malaysia Terengganu, 21030, Kuala Nerus, Terengganu, Malaysia; Center for Transdisciplinary Research, Saveetha Institute of Medical and Technical Sciences, Saveetha University, Chennai, India
| | - Wanxi Peng
- Henan Province Engineering Research Center for Biomass Value-added Products, School of Forestry, Henan Agricultural University, Zhengzhou, 450002, China.
| | - Christian Sonne
- Aarhus University, Department of Bioscience, Arctic Research Centre (ARC), Frederiksborgvej 399, PO Box 358, DK-4000 Roskilde, Denmark; Sustainability Cluster, School of Engineering, University of Petroleum & Energy Studies, Dehradun, Uttarakhand 248007, India
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Rovaletti A, De Gioia L, Fantucci P, Greco C, Vertemara J, Zampella G, Arrigoni F, Bertini L. Recent Theoretical Insights into the Oxidative Degradation of Biopolymers and Plastics by Metalloenzymes. Int J Mol Sci 2023; 24:6368. [PMID: 37047341 PMCID: PMC10094197 DOI: 10.3390/ijms24076368] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2023] [Revised: 03/20/2023] [Accepted: 03/22/2023] [Indexed: 03/30/2023] Open
Abstract
Molecular modeling techniques have become indispensable in many fields of molecular sciences in which the details related to mechanisms and reactivity need to be studied at an atomistic level. This review article provides a collection of computational modeling works on a topic of enormous interest and urgent relevance: the properties of metalloenzymes involved in the degradation and valorization of natural biopolymers and synthetic plastics on the basis of both circular biofuel production and bioremediation strategies. In particular, we will focus on lytic polysaccharide monooxygenase, laccases, and various heme peroxidases involved in the processing of polysaccharides, lignins, rubbers, and some synthetic polymers. Special attention will be dedicated to the interaction between these enzymes and their substrate studied at different levels of theory, starting from classical molecular docking and molecular dynamics techniques up to techniques based on quantum chemistry.
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Affiliation(s)
- Anna Rovaletti
- Department of Earth and Environmental Sciences, University of Milano-Bicocca, Piazza della Scienza 1, 20126 Milan, Italy
| | - Luca De Gioia
- Department of Biotechnology and Biosciences, University of Milano-Bicocca, Piazza della Scienza 2, 20126 Milan, Italy
| | - Piercarlo Fantucci
- Department of Biotechnology and Biosciences, University of Milano-Bicocca, Piazza della Scienza 2, 20126 Milan, Italy
| | - Claudio Greco
- Department of Earth and Environmental Sciences, University of Milano-Bicocca, Piazza della Scienza 1, 20126 Milan, Italy
| | - Jacopo Vertemara
- Department of Biotechnology and Biosciences, University of Milano-Bicocca, Piazza della Scienza 2, 20126 Milan, Italy
| | - Giuseppe Zampella
- Department of Biotechnology and Biosciences, University of Milano-Bicocca, Piazza della Scienza 2, 20126 Milan, Italy
| | - Federica Arrigoni
- Department of Biotechnology and Biosciences, University of Milano-Bicocca, Piazza della Scienza 2, 20126 Milan, Italy
| | - Luca Bertini
- Department of Biotechnology and Biosciences, University of Milano-Bicocca, Piazza della Scienza 2, 20126 Milan, Italy
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Schneider G, Pásztor D, Szabó P, Kőrösi L, Kishan NS, Raju PARK, Calay RK. Isolation and Characterisation of Electrogenic Bacteria from Mud Samples. Microorganisms 2023; 11:781. [PMID: 36985354 PMCID: PMC10058994 DOI: 10.3390/microorganisms11030781] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2023] [Revised: 03/14/2023] [Accepted: 03/15/2023] [Indexed: 03/30/2023] Open
Abstract
To develop efficient microbial fuel cell systems for green energy production using different waste products, establishing characterised bacterial consortia is necessary. In this study, bacteria with electrogenic potentials were isolated from mud samples and examined to determine biofilm-formation capacities and macromolecule degradation. Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry identifications have revealed that isolates represented 18 known and 4 unknown genuses. They all had the capacities to reduce the Reactive Black 5 stain in the agar medium, and 48 of them were positive in the wolfram nanorod reduction assay. The isolates formed biofilm to different extents on the surfaces of both adhesive and non-adhesive 96-well polystyrene plates and glass. Scanning electron microscopy images revealed the different adhesion potentials of isolates to the surface of carbon tissue fibres. Eight of them (15%) were able to form massive amounts of biofilm in three days at 23 °C. A total of 70% of the isolates produced proteases, while lipase and amylase production was lower, at 38% and 27% respectively. All of the macromolecule-degrading enzymes were produced by 11 isolates, and two isolates of them had the capacity to form a strong biofilm on the carbon tissue one of the most used anodic materials in MFC systems. This study discusses the potential of the isolates for future MFC development applications.
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Affiliation(s)
- György Schneider
- Department of Medical Microbiology and Immunology, Medical School, University of Pécs, Szigeti Str. 12, H-7624 Pécs, Hungary
| | - Dorina Pásztor
- Department of Medical Microbiology and Immunology, Medical School, University of Pécs, Szigeti Str. 12, H-7624 Pécs, Hungary
| | - Péter Szabó
- Department of Geology and Meteorology, Faculty of Sciences, University of Pécs, Ifjúság Str. 6, H-7624 Pécs, Hungary
| | - László Kőrösi
- Research Institute for Viticulture and Oenology, University of Pécs, Pázmány P. u. 4, H-7634 Pécs, Hungary
| | - Nandyala Siva Kishan
- Centre for Research and Development, SRKR Engineering College, SRKR Marg, China Amiram, Bhimavaram 534204, India
| | | | - Rajnish Kaur Calay
- Institute for Building Energy and Materials Technology, Narvik Campus, UiT Norway’s Arctic University, 8514 Narvik, Norway
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Ahmad A, Tariq S, Zaman JU, Martin Perales AI, Mubashir M, Luque R. Recent trends and challenges with the synthesis of membranes: Industrial opportunities towards environmental remediation. CHEMOSPHERE 2022; 306:135634. [PMID: 35817181 DOI: 10.1016/j.chemosphere.2022.135634] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/18/2022] [Revised: 06/18/2022] [Accepted: 07/03/2022] [Indexed: 06/15/2023]
Abstract
The industrial and agricultural revolution has posed a serious and potential threat to environment. The industrial and agricultural pollutants are directly released into the environment. This issue has clinched the scientists to work on different materials in order to decontaminate the environment. Among all other techniques, the membrane filtration technology has fascinated researchers to overcome the pollution by its promising features. This review elaborated various membrane synthesis approaches along with their mechanism of filtration, their applications towards environmental remediation such as removal of heavy metals, degradation of dyes, pharma waste, organic pollutants, as well as gas sensing applications. The membrane synthesis using different sort of materials in which inorganic, carbon materials, polymers and metal organic framework (MOFs) are highlighted. These materials have been involved in synthesis of membrane to make it more cost effective and productive to remove such hazardous materials from wastewater. Based on the reported literature, it has been found that inorganic and polymer membranes are facing issues of brittleness and swelling prior to the industrial scale applications related to the high temperature and pressure which needs to be addressed to enhance the permeation performance.
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Affiliation(s)
- Awais Ahmad
- Departamento de Quimica Organica, Universidad de Cordoba, Edificio Marie Curie (C-3), Ctra Nnal IV-A, Km 396, E14014, Cordoba, Spain.
| | - Sadaf Tariq
- Department of Biochemistry, Government College University Faisalabad, 38000, Pakistan
| | - Jahid Uz Zaman
- Département de Chimie (UFR Sciences Fondamentales et Appliquées), Université de Poitiers, Poitiers, 86000, France
| | - Ana Isabel Martin Perales
- Departamento de Quimica Organica, Universidad de Cordoba, Edificio Marie Curie (C-3), Ctra Nnal IV-A, Km 396, E14014, Cordoba, Spain
| | - Muhammad Mubashir
- Department of Petroleum Engineering, School of Engineering, Asia Pacific University of Technology and Innovation, 5700, Kuala Lumpur, Malaysia
| | - Rafael Luque
- Departamento de Quimica Organica, Universidad de Cordoba, Edificio Marie Curie (C-3), Ctra Nnal IV-A, Km 396, E14014, Cordoba, Spain.
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Ranganathan S, Mahesh S, Suresh S, Nagarajan A, Z Sen T, M Yennamalli R. Experimental and computational studies of cellulases as bioethanol enzymes. Bioengineered 2022; 13:14028-14046. [PMID: 35730402 PMCID: PMC9345620 DOI: 10.1080/21655979.2022.2085541] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
Bioethanol industries and bioprocesses have many challenges that constantly impede commercialization of the end product. One of the bottlenecks in the bioethanol industry is the challenge of discovering highly efficient catalysts that can improve biomass conversion. The current promising bioethanol conversion catalysts are microorganism-based cellulolytic enzymes, but lack optimization for high bioethanol conversion, due to biological and other factors. A better understanding of molecular underpinnings of cellulolytic enzyme mechanisms and significant ways to improve them can accelerate the bioethanol commercial production process. In order to do this, experimental methods are the primary choice to evaluate and characterize cellulase’s properties, but they are time-consuming and expensive. A time-saving, complementary approach involves computational methods that evaluate the same properties and improves our atomistic-level understanding of enzymatic mechanism of action. Theoretical methods in many cases have proposed research routes for subsequent experimental testing and validation, reducing the overall research cost. Having a plethora of tools to evaluate cellulases and the yield of the enzymatic process will aid in planning more optimized experimental setups. Thus, there is a need to connect the computational evaluation methods with the experimental methods to overcome the bottlenecks in the bioethanol industry. This review discusses various experimental and computational methods and their use in evaluating the multiple properties of cellulases.
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Affiliation(s)
- Shrivaishnavi Ranganathan
- Department of Biotechnology, School of Chemical and Biotechnology, SASTRA Deemed to be University, Tirumalaisamudram, Thanjavur, India
| | - Sankar Mahesh
- Department of Biotechnology, School of Chemical and Biotechnology, SASTRA Deemed to be University, Tirumalaisamudram, Thanjavur, India
| | - Sruthi Suresh
- Department of Biotechnology, School of Chemical and Biotechnology, SASTRA Deemed to be University, Tirumalaisamudram, Thanjavur, India
| | - Ayshwarya Nagarajan
- Department of Bioinformatics, School of Chemical and Biotechnology, SASTRA Deemed to be University, Tirumalaisamudram, Thanjavur, India
| | - Taner Z Sen
- S. Department of Agriculture, Agricultural Research Service, Crop Improvement and Genetics Research UnitU., California, USA
| | - Ragothaman M Yennamalli
- Department of Bioinformatics, School of Chemical and Biotechnology, SASTRA Deemed to be University, Tirumalaisamudram, Thanjavur, India
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Sarkar O, Rova U, Christakopoulos P, Matsakas L. Organosolv pretreated birch sawdust for the production of green hydrogen and renewable chemicals in an integrated biorefinery approach. BIORESOURCE TECHNOLOGY 2022; 344:126164. [PMID: 34699962 DOI: 10.1016/j.biortech.2021.126164] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2021] [Revised: 10/14/2021] [Accepted: 10/17/2021] [Indexed: 06/13/2023]
Abstract
Sustainable production of fuels and chemicals is the most important way to reduce the carbon footprint in the environment. Forest based abundant lignocellulosic biomass as a renewable feedstock can be an attractive source of biofuels and biochemicals. This study evaluated the production of hydrogen (H2) along with platform chemicals from an organosol pretreated birch sawdust (SD). Acidogenic fermentation (AF) of pretreated SD resulted in production of green H2 (121.4 mL/gVS) along with short (17.8 g/L) and medium (2.64 g/L) chain carboxylic acids. Further integration of AF with anaerobic digestion (AD) in a biorefinery framework offered production of biomethane (bioCH4: 246 mL/gVS) from the leftover SD from AF. Integration of bioH2 with bioCH4 at different time interval of digestion showed 8-14 L biohythane formation ran with a H2 fraction of 1.6-0.3 H2/(H2 + CH4) documenting energy content of 8-9.08 kJ/gVS.
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Affiliation(s)
- Omprakash Sarkar
- Biochemical Process Engineering, Division of Chemical Engineering, Department of Civil, Environmental, and Natural Resources Engineering, Luleå University of Technology, 971‑87 Luleå, Sweden
| | - Ulrika Rova
- Biochemical Process Engineering, Division of Chemical Engineering, Department of Civil, Environmental, and Natural Resources Engineering, Luleå University of Technology, 971‑87 Luleå, Sweden
| | - Paul Christakopoulos
- Biochemical Process Engineering, Division of Chemical Engineering, Department of Civil, Environmental, and Natural Resources Engineering, Luleå University of Technology, 971‑87 Luleå, Sweden
| | - Leonidas Matsakas
- Biochemical Process Engineering, Division of Chemical Engineering, Department of Civil, Environmental, and Natural Resources Engineering, Luleå University of Technology, 971‑87 Luleå, Sweden.
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Dilip Kumar S, Yasasve M, Karthigadevi G, Aashabharathi M, Subbaiya R, Karmegam N, Govarthanan M. Efficiency of microbial fuel cells in the treatment and energy recovery from food wastes: Trends and applications - A review. CHEMOSPHERE 2022; 287:132439. [PMID: 34606889 DOI: 10.1016/j.chemosphere.2021.132439] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2021] [Revised: 09/02/2021] [Accepted: 09/30/2021] [Indexed: 05/27/2023]
Abstract
The rising global population and their food habits result in food wastage and cause an obstacle in its treatment and disposal. Due to the rapid shift in the lifestyle of the human population and urbanization, almost one-third of the food produced is wasted from various sectors like domestic sources, agricultural sectors, and industrial sectors. These food resources squandered are rich in organic biomolecules which can cause complications upon direct disposal in the environment. Conventional disposal methods like composting, landfills and incineration demand high costs besides causing severe environmental and health issues. To overcome these demerits of the conventional methods and to avoid the loss of rich organic food resources, there is an immediate need for a sustainable and eco-friendly solution for the valorization of the food wastes. Microbial fuel cells (MFCs) are gaining attention, due to their ideal approach in the production of electricity and parallel treatment of organic food wastes. The MFCs are significant as an innovative approach using microorganisms and oxidizing the organic food wastes into bio-electricity. In this review, the recent advancements and practices of the MFCs in the field of food waste treatment and management along with electricity production are discussed. The major outcome of this work highlights the setting up of MFC for the treatment of higher volumes of food waste residues and enhancing the bioelectricity production in an optimal condition. For further improvements in the food waste treatments using MFCs, greater understanding and more research needs are to be focused on the commercialization, different operational modes, operational types, and low-cost fabrication coupled with careful examination of scale-up factors.
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Affiliation(s)
- Shanmugam Dilip Kumar
- Department of Biotechnology, Sri Venkateswara College of Engineering, Pennalur Village, Chennai-Bangaluru High Road, Sriperumbudur, 602 117, Tamil Nadu, India
| | - Madhavan Yasasve
- Department of Biotechnology, Sri Venkateswara College of Engineering, Pennalur Village, Chennai-Bangaluru High Road, Sriperumbudur, 602 117, Tamil Nadu, India
| | - Guruviah Karthigadevi
- Department of Biotechnology, Sri Venkateswara College of Engineering, Pennalur Village, Chennai-Bangaluru High Road, Sriperumbudur, 602 117, Tamil Nadu, India
| | - Manimaran Aashabharathi
- Department of Biotechnology, Sree Sastha Institute of Engineering and Technology, Chembarambakam, Chennai, 600 123, Tamil Nadu, India
| | - Ramasamy Subbaiya
- Department of Biological Sciences, School of Mathematics and Natural Sciences, The Copperbelt University, Riverside, Jambo Drive, P O Box, 21692, Kitwe, Zambia
| | - Natchimuthu Karmegam
- Department of Botany, Government Arts College (Autonomous), Salem, 636 007, Tamil Nadu, India.
| | - Muthusamy Govarthanan
- Department of Environmental Engineering, Kyungpook National University, Daegu, 41566, Republic of Korea.
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