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Ramkumar M, Alagarsamy M, Balakumar A, Pradeep S. Ensemble classifier fostered detection of arrhythmia using ECG data. Med Biol Eng Comput 2023; 61:2453-2466. [PMID: 37145258 DOI: 10.1007/s11517-023-02839-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2022] [Accepted: 04/13/2023] [Indexed: 05/06/2023]
Abstract
Electrocardiogram (ECG) is a non-invasive medical tool that divulges the rhythm and function of the human heart. This is broadly employed in heart disease detection including arrhythmia. Arrhythmia is a general term for abnormal heart rhythms that can be identified and classified into many categories. Automatic ECG analysis is provided by arrhythmia categorization in cardiac patient monitoring systems. It aids cardiologists to diagnose the ECG signal. In this work, an Ensemble classifier is proposed for accurate arrhythmia detection using ECG Signal. Input data are taken from the MIT-BIH arrhythmia dataset. Then the input data was pre-processed using Python in Jupyter Notebook which run the code in an isolated manner and was able to keep code, formula, comments, and images. Then, Residual Exemplars Local Binary Pattern is applied for extracting statistical features. The extracted features are given to ensemble classifiers, like Support vector machines (SVM), Naive Bayes (NB), and random forest (RF) for classifying the arrhythmia as normal (N), supraventricular ectopic beat (S), ventricular ectopic beat (V), fusion beat (F), and unknown beat (Q). The proposed AD-Ensemble SVM-NB-RF method is implemented in Python. The proposed AD-Ensemble SVM-NB-RF method is 44.57%, 52.41%, and 29.49% higher accuracy; 2.01%, 3.33%, and 3.19% higher area under the curve (AUC); and 21.52%, 23.05%, and 12.68% better F-Measure compared with existing models, like multi-model depending on the ensemble of deep learning for ECG heartbeats arrhythmia categorization (AD-Ensemble CNN-LSTM-RRHOS), ECG signal categorization utilizing VGGNet: a neural network based classification method (AD-Ensemble CNN-LSTM) and higher performance arrhythmic heartbeat categorization utilizing ensemble learning along PSD based feature extraction method (AD-Ensemble MLP-NB-RF).
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Affiliation(s)
- M Ramkumar
- Department of Electronics and Communication Engineering, Sri Krishna College of Engineering and Technology, Coimbatore, 641-008, Tamil Nadu, India.
| | - Manjunathan Alagarsamy
- Department of Electronics and Communication Engineering, K.Ramakrishnan College of Technology, Trichy, 621112, Tamil Nadu, India
| | - A Balakumar
- Department of Electronics and Communication Engineering, K.Ramakrishnan College of Engineering, Trichy, 621112, Tamil Nadu, India
| | - S Pradeep
- Department of Electronics and Communication Engineering, K.S.Rangasamy College of Technology, Tiruchengode, 637215, Tamil Nadu, India
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2
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Wang Z, Stavrakis S, Yao B. Hierarchical deep learning with Generative Adversarial Network for automatic cardiac diagnosis from ECG signals. Comput Biol Med 2023; 155:106641. [PMID: 36773553 DOI: 10.1016/j.compbiomed.2023.106641] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2022] [Revised: 01/11/2023] [Accepted: 02/05/2023] [Indexed: 02/10/2023]
Abstract
Cardiac disease is the leading cause of death in the US. Accurate heart disease detection is critical to timely medical treatment to save patients' lives. Routine use of the electrocardiogram (ECG) is the most common method for physicians to assess the cardiac electrical activities and detect possible abnormal conditions. Fully utilizing the ECG data for reliable heart disease detection depends on developing effective analytical models. In this paper, we propose a two-level hierarchical deep learning framework with Generative Adversarial Network (GAN) for ECG signal analysis. The first-level model is composed of a Memory-Augmented Deep AutoEncoder with GAN (MadeGAN), which aims to differentiate abnormal signals from normal ECGs for anomaly detection. The second-level learning aims at robust multi-class classification for different arrhythmia identification, which is achieved by integrating the transfer learning technique to transfer knowledge from the first-level learning with the multi-branching architecture to handle the data-lacking and imbalanced data issues. We evaluate the performance of the proposed framework using real-world ECG data from the MIT-BIH arrhythmia database. Experimental results show that our proposed model outperforms existing methods that are commonly used in current practice.
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Affiliation(s)
- Zekai Wang
- Department of Industrial & Systems Engineering, The University of Tennessee, Knoxville, TN, 37996, USA
| | - Stavros Stavrakis
- University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA
| | - Bing Yao
- Department of Industrial & Systems Engineering, The University of Tennessee, Knoxville, TN, 37996, USA.
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3
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Ozturk O, Golparvar A, Acar G, Guler S, Yapici MK. Single-arm diagnostic electrocardiography with printed graphene on wearable textiles. SENSORS AND ACTUATORS. A, PHYSICAL 2023; 349:114058. [PMID: 36447633 PMCID: PMC9686048 DOI: 10.1016/j.sna.2022.114058] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/12/2022] [Revised: 11/04/2022] [Accepted: 11/23/2022] [Indexed: 06/16/2023]
Abstract
Stimulated by the COVID-19 outbreak, the global healthcare industry better acknowledges the necessity of innovating novel methods for remote healthcare monitoring and treating patients outside clinics. Here we report the development of two different types of graphene textile electrodes differentiated by the employed fabrication techniques (i.e., dip-coating and spray printing) and successful demonstration of ergonomic and truly wearable, single-arm diagnostic electrocardiography (SADE) using only 3 electrodes positioned on only 1 arm. The performance of the printed graphene e-textile wearable systems were benchmarked against the "gold standard" silver/silver chloride (Ag/AgCl) "wet" electrodes; achieving excellent correlation up to ∼ 96% and ∼ 98% in ECG recordings (15 s duration) acquired with graphene textiles fabricated by dip-coating and spray printing techniques, respectively. In addition, we successfully implemented automatic detection of heartrate of 8 volunteers (mean value: 74.4 bpm) during 5 min of static and dynamic daily activities and benchmarked their recordings with a standard fingertip photoplethysmography (PPG) device. Heart rate variability (HRV) was calculated, and the root means successive square difference (rMMSD) metric was 30 ms during 5 min of recording. Other cardiac parameters such as R-R interval, QRS complex duration, S-T segment duration, and T-wave duration were also detected and compared to typical chest ECG values.
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Affiliation(s)
- Ozberk Ozturk
- Faculty of Engineering and Natural Sciences, Sabanci University, 34956 Istanbul, Turkey
| | - Ata Golparvar
- Faculty of Engineering and Natural Sciences, Sabanci University, 34956 Istanbul, Turkey
- Integrated Circuit Laboratory, École Polytechnique Fédérale de Lausanne (EPFL), 2002 Neuchâtel, Switzerland
| | - Gizem Acar
- Faculty of Engineering and Natural Sciences, Sabanci University, 34956 Istanbul, Turkey
| | - Saygun Guler
- Faculty of Engineering and Natural Sciences, Sabanci University, 34956 Istanbul, Turkey
| | - Murat Kaya Yapici
- Faculty of Engineering and Natural Sciences, Sabanci University, 34956 Istanbul, Turkey
- Department of Electrical Engineering, University of Washington, 98195 Seattle, USA
- Sabanci University SUNUM Nanotechnology Research Center, 34956 Istanbul, Turkey
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4
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Yang MU, Lee DI, Park S. Automated diagnosis of atrial fibrillation using ECG component-aware transformer. Comput Biol Med 2022; 150:106115. [PMID: 36179512 DOI: 10.1016/j.compbiomed.2022.106115] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2022] [Revised: 09/03/2022] [Accepted: 09/17/2022] [Indexed: 11/03/2022]
Abstract
Atrial fibrillation (AF) is the most common sustained arrhythmia worldwide and imposes a substantial economic burden on the public healthcare system due to its high morbidity and mortality. Early detection of AF is crucial in providing timely treatment and preventing complications such as stroke and other thromboembolism. For AF diagnosis, the 12-lead electrocardiogram (ECG) has been established as the gold standard. However, it requires the clinical experiences of cardiologists and may be vulnerable to inter-observer variability. Although automated AF diagnostic techniques based on deep neural networks (DNN) have been proposed, most studies were conducted using small-scale datasets, resulting in the over-fitting problem. Furthermore, they have not fully exploited ECG components such as P-wave, QRS-complex, and T-wave contrary to the approach adopted by cardiologists who interpret ECG by considering its components. To overcome these limitations, this study presents the component-aware transformer (CAT), which segments the ECG waveform into each component, vectorizes them with length and types information into one vector, and used it as the input of the transformer. We conducted extensive experiments to evaluate the CAT using a large-scale dataset called Shaoxing Hospital Zhejiang University School of Medicine database (AF: 1,780 cases, non-AF: 8,866 cases). The quantitative evaluations demonstrate that the CAT outperforms the conventional deep learning techniques on both single- and 12-lead ECG signals. Moreover, the CAT trained on single-lead ECG is comparable to that of a 12-lead analysis, while conventional methods degraded significantly in performance. Consequently, the CAT is applicable to various single-channel signals such as airway pressure, photoplethysmogram, and blood pressure.
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Affiliation(s)
- Min-Uk Yang
- Medical AI Research Team, Chungbuk National University Hospital, Cheongju-si, Chungcheongbuk-do, 28644, Republic of Korea.
| | - Dae-In Lee
- Department of Cardiology, Chungbuk National University Hospital, Cheongju-si, Chungcheongbuk-do, 28644, Republic of Korea.
| | - Seung Park
- Department of Biomedical Engineering, Chungbuk National University Hospital, Cheongju-si, Chungcheongbuk-do, 28644, Republic of Korea.
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5
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A transformer-based deep neural network for arrhythmia detection using continuous ECG signals. Comput Biol Med 2022; 144:105325. [DOI: 10.1016/j.compbiomed.2022.105325] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2021] [Revised: 02/14/2022] [Accepted: 02/14/2022] [Indexed: 11/24/2022]
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Stracina T, Ronzhina M, Redina R, Novakova M. Golden Standard or Obsolete Method? Review of ECG Applications in Clinical and Experimental Context. Front Physiol 2022; 13:867033. [PMID: 35547589 PMCID: PMC9082936 DOI: 10.3389/fphys.2022.867033] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2022] [Accepted: 03/15/2022] [Indexed: 12/14/2022] Open
Abstract
Cardiovascular system and its functions under both physiological and pathophysiological conditions have been studied for centuries. One of the most important steps in the cardiovascular research was the possibility to record cardiac electrical activity. Since then, numerous modifications and improvements have been introduced; however, an electrocardiogram still represents a golden standard in this field. This paper overviews possibilities of ECG recordings in research and clinical practice, deals with advantages and disadvantages of various approaches, and summarizes possibilities of advanced data analysis. Special emphasis is given to state-of-the-art deep learning techniques intensely expanded in a wide range of clinical applications and offering promising prospects in experimental branches. Since, according to the World Health Organization, cardiovascular diseases are the main cause of death worldwide, studying electrical activity of the heart is still of high importance for both experimental and clinical cardiology.
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Affiliation(s)
- Tibor Stracina
- Department of Physiology, Faculty of Medicine, Masaryk University, Brno, Czech Republic
| | - Marina Ronzhina
- Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Brno, Czech Republic
| | - Richard Redina
- Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Brno, Czech Republic
- International Clinical Research Center, St. Anne’s University Hospital Brno, Brno, Czech Republic
| | - Marie Novakova
- Department of Physiology, Faculty of Medicine, Masaryk University, Brno, Czech Republic
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Petmezas G, Stefanopoulos L, Kilintzis V, Tzavelis A, Rogers JA, Katsaggelos AK, Maglaveras N. State-of-the-art Deep Learning Methods on Electrocardiogram Data: A Systematic Review (Preprint). JMIR Med Inform 2022; 10:e38454. [PMID: 35969441 PMCID: PMC9425174 DOI: 10.2196/38454] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2022] [Revised: 06/03/2022] [Accepted: 07/03/2022] [Indexed: 11/13/2022] Open
Abstract
Background Electrocardiogram (ECG) is one of the most common noninvasive diagnostic tools that can provide useful information regarding a patient’s health status. Deep learning (DL) is an area of intense exploration that leads the way in most attempts to create powerful diagnostic models based on physiological signals. Objective This study aimed to provide a systematic review of DL methods applied to ECG data for various clinical applications. Methods The PubMed search engine was systematically searched by combining “deep learning” and keywords such as “ecg,” “ekg,” “electrocardiogram,” “electrocardiography,” and “electrocardiology.” Irrelevant articles were excluded from the study after screening titles and abstracts, and the remaining articles were further reviewed. The reasons for article exclusion were manuscripts written in any language other than English, absence of ECG data or DL methods involved in the study, and absence of a quantitative evaluation of the proposed approaches. Results We identified 230 relevant articles published between January 2020 and December 2021 and grouped them into 6 distinct medical applications, namely, blood pressure estimation, cardiovascular disease diagnosis, ECG analysis, biometric recognition, sleep analysis, and other clinical analyses. We provide a complete account of the state-of-the-art DL strategies per the field of application, as well as major ECG data sources. We also present open research problems, such as the lack of attempts to address the issue of blood pressure variability in training data sets, and point out potential gaps in the design and implementation of DL models. Conclusions We expect that this review will provide insights into state-of-the-art DL methods applied to ECG data and point to future directions for research on DL to create robust models that can assist medical experts in clinical decision-making.
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Affiliation(s)
- Georgios Petmezas
- Lab of Computing, Medical Informatics and Biomedical-Imaging Technologies, The Medical School, Aristotle University of Thessaloniki, Thessaloniki, Greece
| | - Leandros Stefanopoulos
- Lab of Computing, Medical Informatics and Biomedical-Imaging Technologies, The Medical School, Aristotle University of Thessaloniki, Thessaloniki, Greece
| | - Vassilis Kilintzis
- Lab of Computing, Medical Informatics and Biomedical-Imaging Technologies, The Medical School, Aristotle University of Thessaloniki, Thessaloniki, Greece
| | - Andreas Tzavelis
- Department of Biomedical Engineering, Northwestern University, Evanston, IL, United States
| | - John A Rogers
- Department of Material Science, Northwestern University, Evanston, IL, United States
| | - Aggelos K Katsaggelos
- Department of Electrical and Computer Engineering, Northwestern University, Evanston, IL, United States
| | - Nicos Maglaveras
- Lab of Computing, Medical Informatics and Biomedical-Imaging Technologies, The Medical School, Aristotle University of Thessaloniki, Thessaloniki, Greece
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8
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Rochefort CM, Bourgon Labelle J, Farand P. Nurse Staffing Practices and Postoperative Atrial Fibrillation Among Cardiac Surgery Patients: A Multisite Cohort Study. CJC Open 2022; 4:37-46. [PMID: 35072026 PMCID: PMC8767127 DOI: 10.1016/j.cjco.2021.08.013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2021] [Accepted: 08/25/2021] [Indexed: 12/02/2022] Open
Abstract
BACKGROUND Postoperative atrial fibrillation (POAF) is a frequent complication of cardiac surgery that is associated with increased morbidity, mortality, and costs. Recent studies suggest that nurse staffing practices are associated with adverse postoperative events, but whether these practices are also related to POAF occurrence is unknown. METHODS To fill this knowledge gap, a cohort of 6401 cardiac surgery patients admitted to 2 Canadian university health centres (UHC A and UHC B) between 2014 and 2018 was studied. Patients' cumulative exposure to 4 staffing practices (registered nurse [RN] understaffing, education, experience, and non-RN skill mix) was measured every shift over the first 6 postoperative days, during which 96% of POAF cases occur. The associations of these exposures with in-hospital POAF occurrence were estimated using site-specific multivariable logistic regression models and a mixed-effect model combining data from both sites. RESULTS Overall, 563 (27.2%) and 1336 (30.8%) cases of POAF occurred at UHC A and UHC B, respectively. In site-specific models, every 5% increase in the cumulative proportion of understaffed shifts over the first 6 postoperative days was associated with a 3.5% increase in the odds of POAF (adjusted odds ratio [aOR] for UHC A: 1.035; 95% confidence interval [CI]: 1.000-1.070, P = 0.0472; aOR for UHC B: 1.035; 95% CI: 1.013-1.057, P = 0.0019). In the mixed-effect model combining data from both sites, RN understaffing remained significant and was associated with a 3.1% increase in the odds of POAF (aOR: 1.031; 95% CI: 1.014-1.048, P = 0.0003). No other staffing practices were significantly associated with POAF occurrence. CONCLUSION Higher RN understaffing postoperatively is associated with increased POAF occurrence among cardiac surgery patients.
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Affiliation(s)
- Christian M. Rochefort
- School of Nursing, Faculty of Medicine and Health Sciences, Université de Sherbrooke, Sherbrooke, Quebec, Canada
- Centre de Recherche du Centre Hospitalier Universitaire de Sherbrooke, Sherbrooke, Quebec, Canada
- Centre de Recherche Charles-Le Moyne Saguenay-Lac-St-Jean sur les innovations en santé, Longueuil, Quebec, Canada
| | - Jonathan Bourgon Labelle
- Centre de Recherche du Centre Hospitalier Universitaire de Sherbrooke, Sherbrooke, Quebec, Canada
- Centre de Recherche Charles-Le Moyne Saguenay-Lac-St-Jean sur les innovations en santé, Longueuil, Quebec, Canada
- Division of Cardiology, Centre Hospitalier Universitaire de Sherbrooke, Sherbrooke, Quebec, Canada
| | - Paul Farand
- Centre de Recherche du Centre Hospitalier Universitaire de Sherbrooke, Sherbrooke, Quebec, Canada
- Division of Cardiology, Centre Hospitalier Universitaire de Sherbrooke, Sherbrooke, Quebec, Canada
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9
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Feng P, Fu J, Ge Z, Wang H, Zhou Y, Zhou B, Wang Z. Unsupervised semantic-aware adaptive feature fusion network for arrhythmia detection. Inf Sci (N Y) 2022. [DOI: 10.1016/j.ins.2021.09.046] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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10
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Guo Y, Lip GYH. Beyond atrial fibrillation detection: how digital tools impact the care of patients with atrial fibrillation. Eur J Intern Med 2021; 93:117-118. [PMID: 34531093 DOI: 10.1016/j.ejim.2021.08.026] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/21/2021] [Accepted: 08/27/2021] [Indexed: 11/29/2022]
Affiliation(s)
- Yutao Guo
- Medical School of Chinese PLA, Department of Pulmonary Vessel and Thrombotic Disease, Chinese PLA General Hospital, Beijing, China; Liverpool Centre for Cardiovascular Sciences, University of Liverpool and Liverpool Heart & Chest Hospital, Liverpool, United Kingdom.
| | - Gregory Y H Lip
- Medical School of Chinese PLA, Department of Pulmonary Vessel and Thrombotic Disease, Chinese PLA General Hospital, Beijing, China; Liverpool Centre for Cardiovascular Sciences, University of Liverpool and Liverpool Heart & Chest Hospital, Liverpool, United Kingdom; Department of Clinical Medicine, Aalborg University, Aalborg, Denmark
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Martinek R, Ladrova M, Sidikova M, Jaros R, Behbehani K, Kahankova R, Kawala-Sterniuk A. Advanced Bioelectrical Signal Processing Methods: Past, Present and Future Approach-Part I: Cardiac Signals. SENSORS (BASEL, SWITZERLAND) 2021; 21:5186. [PMID: 34372424 PMCID: PMC8346990 DOI: 10.3390/s21155186] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/14/2021] [Revised: 07/23/2021] [Accepted: 07/26/2021] [Indexed: 11/30/2022]
Abstract
Advanced signal processing methods are one of the fastest developing scientific and technical areas of biomedical engineering with increasing usage in current clinical practice. This paper presents an extensive literature review of the methods for the digital signal processing of cardiac bioelectrical signals that are commonly applied in today's clinical practice. This work covers the definition of bioelectrical signals. It also covers to the extreme extent of classical and advanced approaches to the alleviation of noise contamination such as digital adaptive and non-adaptive filtering, signal decomposition methods based on blind source separation and wavelet transform.
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Affiliation(s)
- Radek Martinek
- FEECS, Department of Cybernetics and Biomedical Engineering, VSB-Technical University Ostrava, 708 00 Ostrava, Czech Republic; (M.L.); (M.S.); (R.J.); (R.K.)
| | - Martina Ladrova
- FEECS, Department of Cybernetics and Biomedical Engineering, VSB-Technical University Ostrava, 708 00 Ostrava, Czech Republic; (M.L.); (M.S.); (R.J.); (R.K.)
| | - Michaela Sidikova
- FEECS, Department of Cybernetics and Biomedical Engineering, VSB-Technical University Ostrava, 708 00 Ostrava, Czech Republic; (M.L.); (M.S.); (R.J.); (R.K.)
| | - Rene Jaros
- FEECS, Department of Cybernetics and Biomedical Engineering, VSB-Technical University Ostrava, 708 00 Ostrava, Czech Republic; (M.L.); (M.S.); (R.J.); (R.K.)
| | - Khosrow Behbehani
- College of Engineering, The University of Texas in Arlington, Arlington, TX 76019, USA;
| | - Radana Kahankova
- FEECS, Department of Cybernetics and Biomedical Engineering, VSB-Technical University Ostrava, 708 00 Ostrava, Czech Republic; (M.L.); (M.S.); (R.J.); (R.K.)
| | - Aleksandra Kawala-Sterniuk
- Faculty of Electrical Engineering, Automatic Control and Informatics, Opole University of Technology, 45-758 Opole, Poland
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