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Breausche FE, Somerlot A, Walder J, Osei K, Okyem S, Driskell JD. Immobilization of Thiol-Modified Horseradish Peroxidase on Gold Nanoparticles Enhances Enzyme Stability and Prevents Proteolytic Digestion. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2024; 40:13957-13967. [PMID: 38919992 DOI: 10.1021/acs.langmuir.4c01180] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/27/2024]
Abstract
The specificity and efficiency of enzyme-mediated reactions have the potential to positively impact many biotechnologies; however, many enzymes are easily degraded. Immobilization on a solid support has recently been explored to improve enzyme stability. This study aims to gain insights and facilitate enzyme adsorption onto gold nanoparticles (AuNPs) to form a stable bioconjugate through the installation of thiol functional groups that alter the protein chemistry. In specific, the model enzyme, horseradish peroxidase (HRP), is thiolated via Traut's reagent to increase the robustness and enzymatic activity of the bioconjugate. This study compares HRP and its thiolated analog (THRP) to deduce the impact of thiolation and AuNP-immobilization on the enzyme activity and stability. HRP, THRP, and their corresponding bioconjugates, HRP-AuNP and THRP-AuNP, were analyzed via UV-vis spectrophotometry, circular dichroism, zeta potential, and enzyme-substrate kinetics assays. Our data show a 5-fold greater adsorption for THRP on the AuNP, in comparison to HRP, that translated to a 5-fold increase in the THRP-AuNP bioconjugate activity. The thiolated and immobilized HRP exhibited a substantial improvement in stability at elevated temperatures (50 °C) and storage times (1 month) relative to the native enzyme in solution. Moreover, HRP, THRP, and their bioconjugates were incubated with trypsin to assess the susceptibility to proteolytic digestion. Our results demonstrate that THRP-AuNP bioconjugates maintain full enzymatic activity after 18 h of incubation with trypsin, whereas free HRP, free THRP, and HRP-AuNP conjugates are rendered inactive by trypsin treatment. These results highlight the potential for protein modification and immobilization to substantially extend enzyme shelf life, resist protease digestion, and enhance biological function to realize enzyme-enabled biotechnologies.
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Affiliation(s)
- Faith E Breausche
- Department of Chemistry, Illinois State University, Normal, Illinois 61790, United States
| | - Annelise Somerlot
- Department of Chemistry, Illinois State University, Normal, Illinois 61790, United States
| | - Jason Walder
- Department of Chemistry, Illinois State University, Normal, Illinois 61790, United States
| | - Kwame Osei
- Department of Chemistry, Illinois State University, Normal, Illinois 61790, United States
| | - Samuel Okyem
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States
| | - Jeremy D Driskell
- Department of Chemistry, Illinois State University, Normal, Illinois 61790, United States
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2
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El-Shora HM, El-Zawawy NA, El-Rheem MAA, Metwally MA. Purification and characterization of L-arginine deiminase from Penicillium chrysogenum. BMC Microbiol 2024; 24:44. [PMID: 38297214 PMCID: PMC10829382 DOI: 10.1186/s12866-024-03192-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2023] [Accepted: 01/10/2024] [Indexed: 02/02/2024] Open
Abstract
L-arginine deiminase (ADI, EC 3.5.3.6) hydrolyzes arginine to ammonia and citrulline which is a natural supplement in health care. ADI was purified from Penicillium chrysogenum using 85% ammonium sulfate, DEAE-cellulose and Sephadex G200. ADI was purified 17.2-fold and 4.6% yield with a specific activity of 50 Umg- 1 protein. The molecular weight was 49 kDa. ADI expressed maximum activity at 40oC and an optimum pH of 6.0. ADI thermostability was investigated and the values of both t0.5 and D were determined. Kd increased by temperature and the Z value was 38oC. ATP, ADP and AMP activated ADI up to 0.6 mM. Cysteine and dithiothreitol activated ADI up to 60 µmol whereas the activation by thioglycolate and reduced glutathione (GSH) prolonged to 80 µmol. EDTA, α,α-dipyridyl, and o-phenanthroline inactivated ADI indicating that ADI is a metalloenzyme. N-ethylmaleimide (NEM), N-bromosuccinimide (NBS), butanedione (BD), dansyl chloride (DC), diethylpyrocarbonate (DEPC) and N-acetyl-imidazole (NAI) inhibited ADI activity indicating the necessity of sulfhydryl, tryptophanyl, arginyl, lysyl, histidyl and tyrosyl groups, respectively for ADI catalysis. The obtained results show that ADI from P. chrysogenum could be a potential candidate for industrial and biotechnological applications.
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Affiliation(s)
- Hamed M El-Shora
- Department of Botany, Faculty of Science, Mansoura University, Mansoura, Egypt.
| | - Nessma A El-Zawawy
- Department of Botany, Faculty of Science, Tanta University, Tanta, Egypt
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3
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Pedro KCNR, da Silva JVV, Cipolatti EP, Manoel EA, Campisano ISP, Henriques CA, Langone MAP. Adsorption of lipases on porous silica-based materials for esterification in a solvent-free system. 3 Biotech 2023; 13:380. [PMID: 37900269 PMCID: PMC10600090 DOI: 10.1007/s13205-023-03801-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2023] [Accepted: 10/03/2023] [Indexed: 10/31/2023] Open
Abstract
This study deals with lipase immobilization on micro- and mesoporous silica-based materials. The effects of the type of support (silica MCM-41, zeolite HZSM-5 (SAR 25), zeolite HZSM-5 (SAR 280), and the silica-aluminas Siral 10, Siral 20, and Siral 40) were investigated on the immobilization of lipase B from Candida antarctica (CALB) and lipase from Rhizomucor miehei (RML). The supports that allowed the highest immobilization efficiencies for the CALB were Siral 40 (91.4%), HZSM-5 (SAR 280) (90.6%), and MCM-41 (89.4%). Siral 20 allowed the highest immobilization efficiency for RML (97.6%), followed by HZSM-5 (SAR 25) (77.1%) and HZSM-5 (SAR 280) (62.7%). The effect of protein concentration on lipase immobilization was investigated, and the results adjusted well on the Langmuir isotherm model (R2 > 0.9). The maximum protein adsorption capacity of the support determined by the Langmuir model was equal to 10.64 and 20.97 mgprotein gsupport-1 for CALB and RML, respectively. The effects of pH (pH 7.0 and pH 11.0) and phosphate buffer solution concentration (5 and 100 mmol L-1) were also investigated on lipase immobilization. The immobilization efficiency for both lipases was similar for the different pH values. The use of 100 mmol L-1 phosphate buffer decreased the lipase immobilization efficiency. The biocatalysts (CALB-Siral 40 and RML-Siral 20) were tested in the ethyl oleate synthesis. The conversion of 61.7% was obtained at 60 °C in the reaction catalyzed by CALB-Siral 40. Both heterogeneous biocatalysts showed increased thermal stability compared with their free form. Finally, the reuse of the biocatalysts was studied. CALB-Siral 40 and RML-Siral 20 maintained about 30% of the initial conversion after 3 batches of ethyl oleate synthesis. Silica-aluminas (Siral 20 and 40) proved to be a support that allowed a high efficiency of immobilization of lipases and activity for esterification reaction.
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Affiliation(s)
- Kelly C N R Pedro
- Departamento de Química Analítica, Instituto de Química, Universidade do Estado do Rio de Janeiro (UERJ), Rua São Francisco Xavier, 524, 20550-900 Rio de Janeiro, RJ Brasil
| | - João V V da Silva
- Departamento de Química Analítica, Instituto de Química, Universidade do Estado do Rio de Janeiro (UERJ), Rua São Francisco Xavier, 524, 20550-900 Rio de Janeiro, RJ Brasil
| | - Eliane P Cipolatti
- Departamento de Engenharia Química, Instituto de Tecnologia, Universidade Federal Rural Do Rio de Janeiro, Rodovia BR 465, Km 07- Zona Rural, 23890-000 Seropédica, RJ Brasil
| | - Evelin A Manoel
- Departamento de Biotecnologia Farmacêutica, Faculdade de Farmácia, Universidade Federal Do Rio de Janeiro (UFRJ), 21941-170 Rio de Janeiro, RJ Brasil
| | - Ivone S P Campisano
- Departamento de Química Analítica, Instituto de Química, Universidade do Estado do Rio de Janeiro (UERJ), Rua São Francisco Xavier, 524, 20550-900 Rio de Janeiro, RJ Brasil
| | - Cristiane A Henriques
- Departamento de Química Analítica, Instituto de Química, Universidade do Estado do Rio de Janeiro (UERJ), Rua São Francisco Xavier, 524, 20550-900 Rio de Janeiro, RJ Brasil
| | - Marta A P Langone
- Departamento de Química Analítica, Instituto de Química, Universidade do Estado do Rio de Janeiro (UERJ), Rua São Francisco Xavier, 524, 20550-900 Rio de Janeiro, RJ Brasil
- Instituto Federal de Educação, Ciência e Tecnologia Do Rio de Janeiro, Rua Senador Furtado, 121, 20260-100 Rio de Janeiro, RJ Brasil
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4
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Chatzigeorgiou S, Jílková J, Korecká L, Janyšková R, Hermannová M, Šimek M, Čožíková D, Slováková M, Bílková Z, Bobek J, Černý Z, Čihák M, Velebný V. Preparation of hyaluronan oligosaccharides by a prokaryotic beta-glucuronidase: Characterization of free and immobilized forms of the enzyme. Carbohydr Polym 2023; 317:121078. [PMID: 37364952 DOI: 10.1016/j.carbpol.2023.121078] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2023] [Revised: 05/26/2023] [Accepted: 05/29/2023] [Indexed: 06/28/2023]
Abstract
Popularity of hyaluronan (HA) in the cosmetics and pharmaceutical industries, led to the investigation and development of new HA-based materials, with enzymes playing a key role. Beta-D-glucuronidases catalyze the hydrolysis of a beta-D-glucuronic acid residue from the non-reducing end of various substrates. However, lack of specificity towards HA for most beta-D-glucuronidases, in addition to the high cost and low purity of those active on HA, have prevented their widespread application. In this study, we investigated a recombinant beta-glucuronidase from Bacteroides fragilis (rBfGUS). We demonstrated the rBfGUS's activity on native, modified, and derivatized HA oligosaccharides (oHAs). Using chromogenic beta-glucuronidase substrate and oHAs, we characterized the enzyme's optimal conditions and kinetic parameters. Additionally, we evaluated rBfGUS's activity towards oHAs of various sizes and types. To increase reusability and ensure the preparation of enzyme-free oHA products, rBfGUS was immobilized on two types of magnetic macroporous bead cellulose particles. Both immobilized forms of rBfGUS demonstrated suitable operational and storage stabilities, and their activity parameters were comparable to the free form. Our findings suggest that native and derivatized oHAs can be prepared using this bacterial beta-glucuronidase, and a novel biocatalyst with enhanced operational parameters has been developed with a potential for industrial use.
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Affiliation(s)
- Sofia Chatzigeorgiou
- Contipro a.s., Dolní Dobrouč 401, 56102 Dolní Dobrouč, Czech Republic; Institute of Immunology and Microbiology, 1st Faculty of Medicine, Charles University, Prague, Czech Republic
| | - Jana Jílková
- Contipro a.s., Dolní Dobrouč 401, 56102 Dolní Dobrouč, Czech Republic; Department of Biochemistry, Faculty of Science, Masaryk University, Kamenice 5, 62500 Brno, Czech Republic.
| | - Lucie Korecká
- Department of Biological and Biochemical Sciences, Faculty of Chemical Technology, University of Pardubice, Studentska 573, 532 10 Pardubice, Czech Republic.
| | - Radka Janyšková
- Contipro a.s., Dolní Dobrouč 401, 56102 Dolní Dobrouč, Czech Republic
| | | | - Matej Šimek
- Contipro a.s., Dolní Dobrouč 401, 56102 Dolní Dobrouč, Czech Republic
| | - Dagmar Čožíková
- Contipro a.s., Dolní Dobrouč 401, 56102 Dolní Dobrouč, Czech Republic
| | - Marcela Slováková
- Department of Biological and Biochemical Sciences, Faculty of Chemical Technology, University of Pardubice, Studentska 573, 532 10 Pardubice, Czech Republic
| | - Zuzana Bílková
- Department of Biological and Biochemical Sciences, Faculty of Chemical Technology, University of Pardubice, Studentska 573, 532 10 Pardubice, Czech Republic
| | - Jan Bobek
- Institute of Immunology and Microbiology, 1st Faculty of Medicine, Charles University, Prague, Czech Republic; Faculty of Science, Jan Evangelista Purkyně University in Ústí nad Labem, České mládeže 8, 400 96 Ústí nad Labem, Czech Republic; Faculty of Biomedical Engineering, Czech Technical University in Prague, Sítná sq. 3105, 272 01 Kladno, Czech Republic
| | - Zbyněk Černý
- Contipro a.s., Dolní Dobrouč 401, 56102 Dolní Dobrouč, Czech Republic
| | - Matouš Čihák
- Contipro a.s., Dolní Dobrouč 401, 56102 Dolní Dobrouč, Czech Republic; Institute of Immunology and Microbiology, 1st Faculty of Medicine, Charles University, Prague, Czech Republic
| | - Vladimír Velebný
- Contipro a.s., Dolní Dobrouč 401, 56102 Dolní Dobrouč, Czech Republic
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5
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Kyomuhimbo HD, Feleni U, Haneklaus NH, Brink H. Recent Advances in Applications of Oxidases and Peroxidases Polymer-Based Enzyme Biocatalysts in Sensing and Wastewater Treatment: A Review. Polymers (Basel) 2023; 15:3492. [PMID: 37631549 PMCID: PMC10460086 DOI: 10.3390/polym15163492] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2023] [Revised: 08/10/2023] [Accepted: 08/17/2023] [Indexed: 08/27/2023] Open
Abstract
Oxidase and peroxidase enzymes have attracted attention in various biotechnological industries due to their ease of synthesis, wide range of applications, and operation under mild conditions. Their applicability, however, is limited by their poor stability in harsher conditions and their non-reusability. As a result, several approaches such as enzyme engineering, medium engineering, and enzyme immobilization have been used to improve the enzyme properties. Several materials have been used as supports for these enzymes to increase their stability and reusability. This review focusses on the immobilization of oxidase and peroxidase enzymes on metal and metal oxide nanoparticle-polymer composite supports and the different methods used to achieve the immobilization. The application of the enzyme-metal/metal oxide-polymer biocatalysts in biosensing of hydrogen peroxide, glucose, pesticides, and herbicides as well as blood components such as cholesterol, urea, dopamine, and xanthine have been extensively reviewed. The application of the biocatalysts in wastewater treatment through degradation of dyes, pesticides, and other organic compounds has also been discussed.
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Affiliation(s)
- Hilda Dinah Kyomuhimbo
- Department of Chemical Engineering, University of Pretoria, Pretoria 0028, South Africa;
| | - Usisipho Feleni
- Institute for Nanotechnology and Water Sustainability (iNanoWS), College of Science, Engineering and Technology, University of South Africa, Florida Campus, Roodepoort, Johannesburg 1710, South Africa;
| | - Nils H. Haneklaus
- Transdisciplinarity Laboratory Sustainable Mineral Resources, University for Continuing Education Krems, 3500 Krems, Austria;
| | - Hendrik Brink
- Department of Chemical Engineering, University of Pretoria, Pretoria 0028, South Africa;
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6
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Bhattacharjee N, Alonso-Cotchico L, Lucas MF. Enzyme immobilization studied through molecular dynamic simulations. Front Bioeng Biotechnol 2023; 11:1200293. [PMID: 37362217 PMCID: PMC10285225 DOI: 10.3389/fbioe.2023.1200293] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2023] [Accepted: 05/30/2023] [Indexed: 06/28/2023] Open
Abstract
In recent years, simulations have been used to great advantage to understand the structural and dynamic aspects of distinct enzyme immobilization strategies, as experimental techniques have limitations in establishing their impact at the molecular level. In this review, we discuss how molecular dynamic simulations have been employed to characterize the surface phenomenon in the enzyme immobilization procedure, in an attempt to decipher its impact on the enzyme features, such as activity and stability. In particular, computational studies on the immobilization of enzymes using i) nanoparticles, ii) self-assembled monolayers, iii) graphene and carbon nanotubes, and iv) other surfaces are covered. Importantly, this thorough literature survey reveals that, while simulations have been primarily performed to rationalize the molecular aspects of the immobilization event, their use to predict adequate protocols that can control its impact on the enzyme properties is, up to date, mostly missing.
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7
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Yuan Y, Shen J, Salmon S. Developing Enzyme Immobilization with Fibrous Membranes: Longevity and Characterization Considerations. MEMBRANES 2023; 13:membranes13050532. [PMID: 37233593 DOI: 10.3390/membranes13050532] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2023] [Revised: 04/14/2023] [Accepted: 05/10/2023] [Indexed: 05/27/2023]
Abstract
Fibrous membranes offer broad opportunities to deploy immobilized enzymes in new reactor and application designs, including multiphase continuous flow-through reactions. Enzyme immobilization is a technology strategy that simplifies the separation of otherwise soluble catalytic proteins from liquid reaction media and imparts stabilization and performance enhancement. Flexible immobilization matrices made from fibers have versatile physical attributes, such as high surface area, light weight, and controllable porosity, which give them membrane-like characteristics, while simultaneously providing good mechanical properties for creating functional filters, sensors, scaffolds, and other interface-active biocatalytic materials. This review examines immobilization strategies for enzymes on fibrous membrane-like polymeric supports involving all three fundamental mechanisms of post-immobilization, incorporation, and coating. Post-immobilization offers an infinite selection of matrix materials, but may encounter loading and durability issues, while incorporation offers longevity but has more limited material options and may present mass transfer obstacles. Coating techniques on fibrous materials at different geometric scales are a growing trend in making membranes that integrate biocatalytic functionality with versatile physical supports. Biocatalytic performance parameters and characterization techniques for immobilized enzymes are described, including several emerging techniques of special relevance for fibrous immobilized enzymes. Diverse application examples from the literature, focusing on fibrous matrices, are summarized, and biocatalyst longevity is emphasized as a critical performance parameter that needs increased attention to advance concepts from lab scale to broader utilization. This consolidation of fabrication, performance measurement, and characterization techniques, with guiding examples highlighted, is intended to inspire future innovations in enzyme immobilization with fibrous membranes and expand their uses in novel reactors and processes.
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Affiliation(s)
- Yue Yuan
- Center for Nanophase Materials and Sciences, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
- Fiber and Polymer Science Program, Department of Textile Engineering Chemistry & Science, North Carolina State University, Raleigh, NC 27695, USA
| | - Jialong Shen
- Fiber and Polymer Science Program, Department of Textile Engineering Chemistry & Science, North Carolina State University, Raleigh, NC 27695, USA
| | - Sonja Salmon
- Fiber and Polymer Science Program, Department of Textile Engineering Chemistry & Science, North Carolina State University, Raleigh, NC 27695, USA
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8
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Silva JFD, Lima CMG, da Silva DL, do Nascimento IS, Rodrigues SDO, Gonçalves LA, Santana RF, Khalid W, Verruck S, Emran TB, de Menezes IRA, Coutinho HDM, Khandaker MU, Faruque MRI, Fontan RDCI. Lectin Purification through Affinity Chromatography Exploiting Macroporous Monolithic Adsorbents. SEPARATIONS 2023; 10:36. [DOI: 10.3390/separations10010036] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/01/2023] Open
Abstract
Growing medical, engineering, biochemical, and biological interest has led to a steady pace of research and development into polymeric monolithic structures with densely interconnected pores for purifying bio compounds. Cryogels, which are generated by freezing a reactive polymerization mixture, are highlighted due to their versatility and low relative cost as macroporous, polymeric, monolithic adsorbents. The conversion of cryogels into affinity adsorbents is one possible alternative to their optimal application. Some of the most often utilized supports for immobilizing particular ligands are monolithic columns manufactured with epoxy radicals on their surfaces. The purification of biomolecules with a high degree of specificity, such as lectins and glycoproteins with an affinity for glycosylated groups, has garnered interest in the use of fixed non-traditional beds functionalized with ligands of particular interest. The interaction is both robust enough to permit the adsorption of glycoproteins and reversible enough to permit the dissociation of molecules in response to changes in the solution’s pH. When compared to other protein A-based approaches, this one has been shown to be more advantageous than its counterparts in terms of specificity, ease of use, and cost-effectiveness. Information on polymeric, macroporous, monolithic adsorbents used in the affinity chromatographic purification of lectins has been published and explored.
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Zurier HS, Goddard JM. Directed Immobilization of PETase on Mesoporous Silica Enables Sustained Depolymerase Activity in Synthetic Wastewater Conditions. ACS APPLIED BIO MATERIALS 2022; 5:4981-4992. [PMID: 36194455 DOI: 10.1021/acsabm.2c00700] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Microplastic accumulation in terrestrial and aquatic environments is a growing environmental challenge. Biodegradation has shown promise as an intervention strategy for reducing the spread of microplastics. The wastewater treatment system is a key intervention point in microplastic biodegradation due to its pivotal role in the water cycle at the interface between human activity and the environmental. However, the best characterized microplastic degradation enzyme, PETase, lacks the stability to perform at scale in wastewater treatment. In this work, we show that genetic fusion of PETase to a silica binding peptide enables directed immobilization of the enzyme onto silica nanoparticles. PETase activity in simulated wastewater conditions is quantified by linear regression from time zero to the time of maximum fluorescence of a fluorescent oxidized product of PETase degradation of PET microfibers. Mesoporous silica is shown to be a superior support material to nonporous silica. The resulting biocatalytic nanomaterial has up to 2.5-fold enhanced stability and 6.2-fold increased activity compared to free enzyme in unbuffered, 40 °C simulated influent (ionic strength ∼15 mM). In unbuffered, 40 °C simulated effluent (ionic strength ∼700 μM), reaction velocity and overall catalytic activity were increased by the biocatalytic material 2.1-fold relative to free PETase. All reactions were performed in 0.2 mL volumes, and enzyme concentrations were normalized across both free and immobilized samples to 9 μg/mL. Site-directed mutagenesis is shown to be a complementary technique to directed immobilization, which may aid in optimization of the biomaterial for wastewater applications. PETase stabilization in application-relevant environments as shown here enables progress toward application of PETase for microplastic biodegradation in wastewater treatment.
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Affiliation(s)
- Hannah S Zurier
- Department of Food Science and Technology, Cornell University, Ithaca, New York14853, United States
| | - Julie M Goddard
- Department of Food Science and Technology, Cornell University, Ithaca, New York14853, United States
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10
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Chen J, Xu E, Wei Y, Chen M, Wei T, Zheng S. Graph Clustering Analyses of Discontinuous Molecular Dynamics Simulations: Study of Lysozyme Adsorption on a Graphene Surface. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2022; 38:10817-10825. [PMID: 36001808 DOI: 10.1021/acs.langmuir.2c01331] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Understanding the interfacial behaviors of biomolecules is crucial to applications in biomaterials and nanoparticle-based biosensing technologies. In this work, we utilized autoencoder-based graph clustering to analyze discontinuous molecular dynamics (DMD) simulations of lysozyme adsorption on a graphene surface. Our high-throughput DMD simulations integrated with a Go̅-like protein-surface interaction model makes it possible to explore protein adsorption at a large temporal scale with sufficient accuracy. The graph autoencoder extracts a low-dimensional feature vector from a contact map. The sequence of the extracted feature vectors is then clustered, and thus the evolution of the protein molecule structure in the absorption process is segmented into stages. Our study demonstrated that the residue-surface hydrophobic interactions and the π-π stacking interactions play key roles in the five-stage adsorption. Upon adsorption, the tertiary structure of lysozyme collapsed, and the secondary structure was also affected. The folding stages obtained by autoencoder-based graph clustering were consistent with detailed analyses of the protein structure. The combination of machine learning analysis and efficient DMD simulations developed in this work could be an important tool to study biomolecules' interfacial behaviors.
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Affiliation(s)
- Jing Chen
- College of Materials and Chemistry & Chemical Engineering, Chengdu University of Technology, Chengdu, Sichuan 610059, P. R. China
| | | | - Yong Wei
- Department of Computer Science, High Point University, High Point, North Carolina 27268, United States
| | | | - Tao Wei
- Department of Chemical Engineering, Howard University, Washington, D.C. 20059, United States
| | - Size Zheng
- College of Materials and Chemistry & Chemical Engineering, Chengdu University of Technology, Chengdu, Sichuan 610059, P. R. China
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11
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Wang M, Wang L, Lyu X, Hua X, Goddard JM, Yang R. Lactulose production from lactose isomerization by chemo-catalysts and enzymes: Current status and future perspectives. Biotechnol Adv 2022; 60:108021. [PMID: 35901861 DOI: 10.1016/j.biotechadv.2022.108021] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2022] [Revised: 07/02/2022] [Accepted: 07/17/2022] [Indexed: 11/29/2022]
Abstract
Lactulose, a semisynthetic nondigestive disaccharide with versatile applications in the food and pharmaceutical industries, has received increasing interest due to its significant health-promoting effects. Currently, industrial lactulose production is exclusively carried out by chemical isomerization of lactose via the Lobry de Bruyn-Alberda van Ekenstein (LA) rearrangement, and much work has been directed toward improving the conversion efficiency in terms of lactulose yield and purity by using new chemo-catalysts and integrated catalytic-purification systems. Lactulose can also be produced by an enzymatic route offering a potentially greener alternative to chemo-catalysis with fewer side products. Compared to the controlled trans-galactosylation by β-galactosidase, directed isomerization of lactose with high isomerization efficiency catalyzed by the most efficient lactulose-producing enzyme, cellobiose 2-epimerase (CE), has gained much attention in recent decades. To further facilitate the industrial translation of CE-based lactulose biotransformation, numerous studies have been reported on improving biocatalytic performance through enzyme mediated molecular modification. This review summarizes recent developments in the chemical and enzymatic production of lactulose. Related catalytic mechanisms are also highlighted and described in detail. Emerging techniques that aimed at advancing lactulose production, such as the boronate affinity-based technique and molecular biological techniques, are reviewed. Finally, perspectives on challenges and opportunities in lactulose production and purification are also discussed.
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Affiliation(s)
- Mingming Wang
- State Key Laboratory of Food Science and Technology, Jiangnan University, 214122 Wuxi, China; College of Food Science and Engineering, Ocean University of China, Qingdao, Shandong Province 266003, China; Department of Food Science, Cornell University, Ithaca, NY 14853, USA
| | - Lu Wang
- State Key Laboratory of Food Science and Technology, Jiangnan University, 214122 Wuxi, China
| | - Xiaomei Lyu
- State Key Laboratory of Food Science and Technology, Jiangnan University, 214122 Wuxi, China
| | - Xiao Hua
- State Key Laboratory of Food Science and Technology, Jiangnan University, 214122 Wuxi, China
| | - Julie M Goddard
- Department of Food Science, Cornell University, Ithaca, NY 14853, USA.
| | - Ruijin Yang
- State Key Laboratory of Food Science and Technology, Jiangnan University, 214122 Wuxi, China.
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12
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Anboo S, Lau SY, Kansedo J, Yap P, Hadibarata T, Jeevanandam J, Kamaruddin AH. Recent Advancements in Enzyme‐Incorporated Nanomaterials: Synthesis, Mechanistic Formation and Applications. Biotechnol Bioeng 2022; 119:2609-2638. [PMID: 35851660 PMCID: PMC9543334 DOI: 10.1002/bit.28185] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2022] [Revised: 06/21/2022] [Accepted: 07/15/2022] [Indexed: 11/09/2022]
Abstract
Over the past decade, nanotechnology has been developed and employed across various entities. Among the numerous nanostructured material types, enzyme‐incorporated nanomaterials have shown great potential in various fields, as an alternative to biologically derived as well as synthetically developed hybrid structures. The mechanism of incorporating enzyme onto a nanostructure depends on several factors including the method of immobilization, type of nanomaterial, as well as operational and environmental conditions. The prospects of enzyme‐incorporated nanomaterials have shown promising results across various applications, such as biocatalysts, biosensors, drug therapy, and wastewater treatment. This is due to their excellent ability to exhibit chemical and physical properties such as high surface‐to‐volume ratio, recovery and/or reusability rates, sensitivity, response scale, and stable catalytic activity across wide operating conditions. In this review, the evolution of enzyme‐incorporated nanomaterials along with their impact on our society due to its state‐of‐the‐art properties, and its significance across different industrial applications are discussed. In addition, the weakness and future prospects of enzyme‐incorporated nanomaterials were also discussed to guide scientists for futuristic research and development in this field.
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Affiliation(s)
- Shamini Anboo
- Department of Chemical EngineeringFaculty of Engineering and Science, Curtin University MalaysiaCDT 25098009MiriSarawakMalaysia
| | - Sie Yon Lau
- Department of Chemical EngineeringFaculty of Engineering and Science, Curtin University MalaysiaCDT 25098009MiriSarawakMalaysia
| | - Jibrail Kansedo
- Department of Chemical EngineeringFaculty of Engineering and Science, Curtin University MalaysiaCDT 25098009MiriSarawakMalaysia
| | - Pow‐Seng Yap
- Department of Civil EngineeringXi’an Jiaotong‐Liverpool UniversitySuzhou215123China
| | - Tony Hadibarata
- Department of Chemical EngineeringFaculty of Engineering and Science, Curtin University MalaysiaCDT 25098009MiriSarawakMalaysia
| | - Jaison Jeevanandam
- CQM‐Centro de Química da Madeira, MMRG, Universidade da Madeira, Campus da Penteada9020‐105FunchalPortugal
| | - Azlina Harun Kamaruddin
- School of Chemical EngineeringUniversiti Sains Malaysia14300 Nibong TebalSeberang Perai SelatanPenangMalaysia
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13
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Padhi SSP, Jimenez Bartolome M, Nyanhongo GS, Schwaiger N, Pellis A, van Herwijnen HWG, Guebitz GM. Role of Surface Enhancement in the Enzymatic Cross-Linking of Lignosulfonate Using Alternative Downstream Techniques. ACS OMEGA 2022; 7:23749-23758. [PMID: 35847290 PMCID: PMC9280766 DOI: 10.1021/acsomega.2c02421] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Lignosulfonate (LS), one of the byproducts of the paper and pulp industry, was mainly used as an energy source in the last decade until the valorization of lignin through different functionalization methods grew in importance. Polymerization using multicopper oxidase laccase (from the Myceliophthora thermophila fungus) is one of such methods, which not only enhances properties such as hydrophobicity, flame retardancy, and bonding properties but can also be used for food and possesses pharmaceutical-like antimicrobial properties and aesthetic features of materials. Appropriate downstream processing methods are needed to produce solids that allow the preservation of particle morphology, a vital factor for the valorization process. In this work, an optimization of the enzymatic polymerization via spray-drying of LS was investigated. The response surface methodology was used to optimize the drying process, reduce the polymerization time, and maximize the dried mass yield. Particles formed showed a concave morphology and enhanced solubility while the temperature sensitivity of spray-drying protected the phenol functionalities beneficial for polymerization. Using the optimized parameters, a yield of 65% in a polymerization time of only 13 min was obtained. The experimental values were found to be in agreement with the predicted values of the factors (R 2: 95.2% and p-value: 0.0001), indicating the suitability of the model in predicting polymerization time and yield of the spray-drying process.
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Affiliation(s)
- Sidhant Satya Prakash Padhi
- Wood
Kplus - Competence Center for Wood Composites & Wood Chemistry, Kompetenzzentrum Holz GmbH, Altenberger Straße 69, Linz A-4040, Austria
- Institute
of Environmental Biotechnology, University
of Natural Resources and Life Sciences, Vienna, Konrad Lorenz Strasse 20, Tulln an der Donau 3430, Austria
| | - Miguel Jimenez Bartolome
- Institute
of Environmental Biotechnology, University
of Natural Resources and Life Sciences, Vienna, Konrad Lorenz Strasse 20, Tulln an der Donau 3430, Austria
| | - Gibson Stephen Nyanhongo
- Institute
of Environmental Biotechnology, University
of Natural Resources and Life Sciences, Vienna, Konrad Lorenz Strasse 20, Tulln an der Donau 3430, Austria
- Department
of Biotechnology and Food Technology, University
of Johannesburg, P.O.
Box 17011, Doornfontein 2028, South Africa
| | | | - Alessandro Pellis
- Institute
of Environmental Biotechnology, University
of Natural Resources and Life Sciences, Vienna, Konrad Lorenz Strasse 20, Tulln an der Donau 3430, Austria
- Dipartimento
di Chimica e Chimica Industriale, Università
degli Studi di Genova, via Dodecaneso 31, Genova 16146, Italy
| | - Hendrikus W. G. van Herwijnen
- Wood
Kplus - Competence Center for Wood Composites & Wood Chemistry, Kompetenzzentrum Holz GmbH, Altenberger Straße 69, Linz A-4040, Austria
- Institute
of Wood Technology and Renewable Materials, University of Natural Resources and Life Sciences, Vienna, Konrad Lorenz Strasse 24, Tulln an der Donau 3430, Austria
| | - Georg M. Guebitz
- Institute
of Environmental Biotechnology, University
of Natural Resources and Life Sciences, Vienna, Konrad Lorenz Strasse 20, Tulln an der Donau 3430, Austria
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14
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Preparation and characterization of a novel 3D polymer support for the immobilization of cyclodextrin glucanotransferase and efficient biocatalytic synthesis of α-arbutin. Biochem Eng J 2022. [DOI: 10.1016/j.bej.2022.108519] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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15
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Zhao SW, Zhou Q, Long NB, Zhang RF. Efficient synthesis of N-acetyllactosamine using immobilized β-galactosidase on a novel 3D polymer support. Enzyme Microb Technol 2022; 160:110070. [DOI: 10.1016/j.enzmictec.2022.110070] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2022] [Revised: 05/09/2022] [Accepted: 05/28/2022] [Indexed: 11/03/2022]
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16
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Pota G, Sapienza Salerno A, Costantini A, Silvestri B, Passaro J, Califano V. Co-immobilization of Cellulase and β-Glucosidase into Mesoporous Silica Nanoparticles for the Hydrolysis of Cellulose Extracted from Eriobotrya japonica Leaves. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2022; 38:5481-5493. [PMID: 35476419 PMCID: PMC9097537 DOI: 10.1021/acs.langmuir.2c00053] [Citation(s) in RCA: 20] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/08/2022] [Revised: 03/16/2022] [Indexed: 06/14/2023]
Abstract
Fungal cellulases generally contain a reduced amount of β-glucosidase (BG), which does not allow for efficient cellulose hydrolysis. To address this issue, we implemented an easy co-immobilization procedure of β-glucosidase and cellulase by adsorption on wrinkled mesoporous silica nanoparticles with radial and hierarchical open pore structures, exhibiting smaller (WSN) and larger (WSN-p) inter-wrinkle distances. The immobilization was carried out separately on different vectors (WSN for BG and WSN-p for cellulase), simultaneously on the same vector (WSN-p), and sequentially on the same vector (WSN-p) in order to optimize the synergy between cellulase and BG. The obtained results pointed out that the best biocatalyst is that prepared through simultaneous immobilization of BG and cellulase on the same vector (WSN-p). In this case, the adsorption resulted in 20% yield of immobilization, corresponding to an enzyme loading of 100 mg/g of support. 82% yield of reaction and 72 μmol/min·g activity were obtained, evaluated for the hydrolysis of cellulose extracted from Eriobotrya japonica leaves. All reactions were carried out at a standard temperature of 50 °C. The biocatalyst retained 83% of the initial yield of reaction after 9 cycles of reuse. Moreover, it had better stability than the free enzyme mixture in a wide range of temperatures, preserving 72% of the initial yield of reaction up to 90 °C.
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Affiliation(s)
- Giulio Pota
- Department
of Chemical, Materials and Production Engineering, University of Naples Federico II, Piazzale Tecchio 80, 80125 Fuorigrotta, Naples, Italy
| | - Antonio Sapienza Salerno
- Department
of Chemical, Materials and Production Engineering, University of Naples Federico II, Piazzale Tecchio 80, 80125 Fuorigrotta, Naples, Italy
| | - Aniello Costantini
- Department
of Chemical, Materials and Production Engineering, University of Naples Federico II, Piazzale Tecchio 80, 80125 Fuorigrotta, Naples, Italy
| | - Brigida Silvestri
- Department
of Chemical, Materials and Production Engineering, University of Naples Federico II, Piazzale Tecchio 80, 80125 Fuorigrotta, Naples, Italy
| | - Jessica Passaro
- Department
of Chemical, Materials and Production Engineering, University of Naples Federico II, Piazzale Tecchio 80, 80125 Fuorigrotta, Naples, Italy
| | - Valeria Califano
- Institute
of Science and Technology for Sustainable Energy and Mobility (STEMS), National Research Council of Italy (CNR), Viale Marconi 4, 80125 Naples, Italy
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17
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Wang X, Xie Y, Wang Z, Zhang K, Wang H, Wei D. Efficient Synthesis of ( S)-1-Boc-3-aminopiperidine in a Continuous Flow System Using ω-Transaminase-Immobilized Amino-Ethylenediamine-Modified Epoxide Supports. Org Process Res Dev 2022. [DOI: 10.1021/acs.oprd.1c00217] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Xiangxiang Wang
- State Key Laboratory of Bioreactor Engineering, New World Institute of Biotechnology, East China University of Science and Technology, Shanghai 200237, P.R. China
| | - Youyu Xie
- State Key Laboratory of Bioreactor Engineering, New World Institute of Biotechnology, East China University of Science and Technology, Shanghai 200237, P.R. China
| | - Zhicai Wang
- State Key Laboratory of Bioreactor Engineering, New World Institute of Biotechnology, East China University of Science and Technology, Shanghai 200237, P.R. China
| | - Ke Zhang
- State Key Laboratory of Bioreactor Engineering, New World Institute of Biotechnology, East China University of Science and Technology, Shanghai 200237, P.R. China
| | - Hualei Wang
- State Key Laboratory of Bioreactor Engineering, New World Institute of Biotechnology, East China University of Science and Technology, Shanghai 200237, P.R. China
| | - Dongzhi Wei
- State Key Laboratory of Bioreactor Engineering, New World Institute of Biotechnology, East China University of Science and Technology, Shanghai 200237, P.R. China
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18
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Alshanski I, Shitrit A, Sukhran Y, Unverzagt C, Hurevich M, Yitzchaik S. Effect of Interfacial Properties on Impedimetric Biosensing of the Sialylation Process with a Biantennary N-Glycan-Based Monolayer. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2022; 38:849-855. [PMID: 34989586 DOI: 10.1021/acs.langmuir.1c02995] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Sensing enzymatic sialylation provides new tools for the evaluation of pathological events and pathogen invasion. Enzymatic sialylation is usually monitored via fluorescence or metabolic labeling, which requires relatively large amounts of the glycan substrate with limited availability. Using a label-free biosensor requires smaller quantities of substrates because the interactions induce measurable changes to an interface, which can be translated into a signal. The downside of label-free biosensors is that they are very sensitive to changes at the interface, and the properties of the surface layer can play a major role. Electrochemical impedance spectroscopy was used here to follow the enzymatic sialylation of a biantennary N-glycan acceptor in mixed monolayers. The surfaces contained either neutral, positively or negatively charged, or zwitterionic functional groups. The systems were characterized by contact potential difference, ellipsometry, and contact angle analyses. We found that the characteristics of the mixed monolayer have a profound effect on the biosensing of the enzymatic sialylation. Positively charged layers were found to adsorb the enzyme under the reaction conditions. Negatively charged and zwitterionic surfaces were nonresponsive to enzymatic sialylation. Only the neutral mixed monolayers provided signals that were related directly to enzymatic sialylation. This work demonstrates the importance of appropriate interface properties for monitoring enzymatic sialylation processes.
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Affiliation(s)
- Israel Alshanski
- Institute of Chemistry and Center for Nanoscience and Nanotechnology, The Hebrew University of Jerusalem, Safra Campus, Givat Ram, Jerusalem 91904, Israel
| | - Ariel Shitrit
- Institute of Chemistry and Center for Nanoscience and Nanotechnology, The Hebrew University of Jerusalem, Safra Campus, Givat Ram, Jerusalem 91904, Israel
| | - Yonatan Sukhran
- Institute of Chemistry and Center for Nanoscience and Nanotechnology, The Hebrew University of Jerusalem, Safra Campus, Givat Ram, Jerusalem 91904, Israel
| | - Carlo Unverzagt
- Bioorganic Chemistry, University of Bayreuth, Universitätsstraße 30, 95447 Bayreuth, Germany
| | - Mattan Hurevich
- Institute of Chemistry and Center for Nanoscience and Nanotechnology, The Hebrew University of Jerusalem, Safra Campus, Givat Ram, Jerusalem 91904, Israel
| | - Shlomo Yitzchaik
- Institute of Chemistry and Center for Nanoscience and Nanotechnology, The Hebrew University of Jerusalem, Safra Campus, Givat Ram, Jerusalem 91904, Israel
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19
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Optimized Silica-Binding Peptide-Mediated Delivery of Bactericidal Lysin Efficiently Prevents Staphylococcus aureus from Adhering to Device Surfaces. Int J Mol Sci 2021; 22:ijms222212544. [PMID: 34830425 PMCID: PMC8619460 DOI: 10.3390/ijms222212544] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2021] [Revised: 11/07/2021] [Accepted: 11/16/2021] [Indexed: 01/18/2023] Open
Abstract
Staphylococcal-associated device-related infections (DRIs) represent a significant clinical challenge causing major medical and economic sequelae. Bacterial colonization, proliferation, and biofilm formation after adherence to surfaces of the indwelling device are probably the primary cause of DRIs. To address this issue, we incorporated constructs of silica-binding peptide (SiBP) with ClyF, an anti-staphylococcal lysin, into functionalized coatings to impart bactericidal activity against planktonic and sessile Staphylococcus aureus. An optimized construct, SiBP1-ClyF, exhibited improved thermostability and staphylolytic activity compared to its parental lysin ClyF. SiBP1-ClyF-functionalized coatings were efficient in killing MRSA strain N315 (>99.999% within 1 h) and preventing the growth of static and dynamic S. aureus biofilms on various surfaces, including siliconized glass, silicone-coated latex catheter, and silicone catheter. Additionally, SiBP1-ClyF-immobilized surfaces supported normal attachment and growth of mammalian cells. Although the recycling potential and long-term stability of lysin-immobilized surfaces are still affected by the fragility of biological protein molecules, the present study provides a generic strategy for efficient delivery of bactericidal lysin to solid surfaces, which serves as a new approach to prevent the growth of antibiotic-resistant microorganisms on surfaces in hospital settings and could be adapted for other target pathogens as well.
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20
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Sharma A, Thatai KS, Kuthiala T, Singh G, Arya SK. Employment of polysaccharides in enzyme immobilization. REACT FUNCT POLYM 2021. [DOI: 10.1016/j.reactfunctpolym.2021.105005] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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21
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Bilal M, Hussain N, Américo-Pinheiro JHP, Almulaiky YQ, Iqbal HMN. Multi-enzyme co-immobilized nano-assemblies: Bringing enzymes together for expanding bio-catalysis scope to meet biotechnological challenges. Int J Biol Macromol 2021; 186:735-749. [PMID: 34271049 DOI: 10.1016/j.ijbiomac.2021.07.064] [Citation(s) in RCA: 37] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2021] [Revised: 06/23/2021] [Accepted: 07/10/2021] [Indexed: 02/06/2023]
Abstract
Co-immobilization of multi-enzymes has emerged as a promising concept to design and signify bio-catalysis engineering. Undoubtedly, the existence and importance of basic immobilization methods such as encapsulation, covalent binding, cross-linking, or even simple adsorption cannot be ignored as they are the core of advanced co-immobilization strategies. Different strategies have been developed and deployed to green the twenty-first century bio-catalysis. Moreover, co-immobilization of multi-enzymes has successfully resolved the limitations of individual enzyme loaded constructs. With an added value of this advanced bio-catalysis engineering platform, designing, and fabricating co-immobilized enzymes loaded nanostructure carriers to perform a particular set of reactions with high catalytic turnover is of supreme interest. Herein, we spotlight the emergence of co-immobilization strategies by bringing multi-enzymes together with various types of nanocarriers to expand the bio-catalysis scope. Following a brief introduction, the first part of the review focuses on multienzyme co-immobilization strategies, i.e., random co-immobilization, compartmentalization, and positional co-immobilization. The second part comprehensively covers four major categories of nanocarriers, i.e., carbon based nanocarriers, polymer based nanocarriers, silica-based nanocarriers, and metal-based nanocarriers along with their particular examples. In each section, several critical factors that can affect the performance and successful deployment of co-immobilization of enzymes are given in this work.
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Affiliation(s)
- Muhammad Bilal
- School of Life Science and Food Engineering, Huaiyin Institute of Technology, Huaian 223003, China.
| | - Nazim Hussain
- Centre for Applied Molecular Biology (CAMB), University of the Punjab, Lahore 53700, Pakistan
| | | | - Yaaser Q Almulaiky
- University of Jeddah, College of Sciences and Arts at Khulais, Department of Chemistry, Jeddah, Saudi Arabia; Chemistry Department, Faculty of Applied Science, Taiz University, Taiz, Yemen
| | - Hafiz M N Iqbal
- Tecnologico de Monterrey, School of Engineering and Sciences, Monterrey 64849, Mexico.
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22
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Ren L, Ji H, Heuzé K, Faure B, Genin E, Rousselot Pailley P, Tron T. Modulation of laccase catalysed oxidations at the surface of magnetic nanoparticles. Colloids Surf B Biointerfaces 2021; 206:111963. [PMID: 34293579 DOI: 10.1016/j.colsurfb.2021.111963] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2021] [Revised: 06/22/2021] [Accepted: 06/29/2021] [Indexed: 11/18/2022]
Abstract
We explored the coupling of laccases to magnetic nanoparticles (MNPs) with different surface chemical coating. Two laccase variants offering two opposite and precise orientations of the substrate oxidation site were immobilised onto core-shell MNPs presenting either aliphatic aldehyde, aromatic aldehyde or azide functional groups at the particles surface. Oxidation capabilities of the six-resulting laccase-MNP hybrids were compared on ABTS and coniferyl alcohol. Herein, we show that the original interfaces created differ substantially in their reactivities with an amplitude from 1 to > 4 folds depending on the nature of the substrate. Taking enzyme orientation into account in the design of surface modification represents a way to introduce selectivity in laccase catalysed reactions.
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Affiliation(s)
- Lu Ren
- Aix Marseille Université, Centrale Marseille, CNRS, iSm2 UMR7313, 13397 Marseille, France
| | - Hongtao Ji
- Institut des Sciences Moléculaires, Université de Bordeaux, CNRS UMR5255, 33405 Talence cedex, France
| | - Karine Heuzé
- Institut des Sciences Moléculaires, Université de Bordeaux, CNRS UMR5255, 33405 Talence cedex, France.
| | - Bruno Faure
- Aix Marseille Université, Centrale Marseille, CNRS, iSm2 UMR7313, 13397 Marseille, France
| | - Emilie Genin
- Institut des Sciences Moléculaires, Université de Bordeaux, CNRS UMR5255, 33405 Talence cedex, France
| | | | - Thierry Tron
- Aix Marseille Université, Centrale Marseille, CNRS, iSm2 UMR7313, 13397 Marseille, France.
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23
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Teepakorn C, Zajkoska P, Cwicklinski G, De Berardinis V, Zaparucha A, Nonglaton G, Anxionnaz-Minvielle Z. Nitrilase immobilization and transposition from a micro-scale batch to a continuous process increase the nicotinic acid productivity. Biotechnol J 2021; 16:e2100010. [PMID: 34270173 DOI: 10.1002/biot.202100010] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2021] [Revised: 07/05/2021] [Accepted: 07/09/2021] [Indexed: 01/14/2023]
Abstract
In recent years, many biocatalytic processes have been developed for the production of chemicals and pharmaceuticals. In this context, enzyme immobilization methods have attracted attention for their advantages, such as continuous production and increased stability. Here, enzyme immobilization methods and a collection of nitrilases from biodiversity for the conversion of 3-cyanopyridine to nicotinic acid were screened. Substrate conversion over 10 conversion cycles was monitored to optimize the process. The best immobilization conditions were found with cross-linking using glutaraldehyde to modify the PMMA beads. This method showed good activity over 10 cycles in a batch reactor at 30 and 40°C. Finally, production with a new thermostable nitrilase was examined in a continuous packed bed reactor, showing very high stability of the biocatalytic process at a flow rate of 0.12 ml min-1 and a temperature of 50°C. The complete conversion of 3-cyanopyridine was obtained over 30 days of operation. Future steps will concern reactor scale-up to increase the production rate with reasonable pressure drops.
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Affiliation(s)
- Chalore Teepakorn
- CEA, LITEN, DTCH, Laboratoire Composants et Systèmes Thermiques (LCST), Univ. Grenoble Alpes, Grenoble, France.,CEA, LETI, DTBS, Laboratoire des Systèmes Microfluidiques pour la Biologie (LSMB), Univ. Grenoble Alpes, Grenoble, France
| | - Petra Zajkoska
- CEA, LETI, DTBS, Laboratoire Chimie, Capteurs et Biomatériaux (L2CB), Univ. Grenoble Alpes, Grenoble, France.,Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ. Evry, Univ. Paris-Saclay, Paris, France
| | - Gregory Cwicklinski
- CEA, LITEN, DTCH, Laboratoire Composants et Systèmes Thermiques (LCST), Univ. Grenoble Alpes, Grenoble, France
| | - Véronique De Berardinis
- Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ. Evry, Univ. Paris-Saclay, Paris, France
| | - Anne Zaparucha
- Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ. Evry, Univ. Paris-Saclay, Paris, France
| | - Guillaume Nonglaton
- CEA, LETI, DTBS, Laboratoire Chimie, Capteurs et Biomatériaux (L2CB), Univ. Grenoble Alpes, Grenoble, France
| | - Zoé Anxionnaz-Minvielle
- CEA, LITEN, DTCH, Laboratoire Composants et Systèmes Thermiques (LCST), Univ. Grenoble Alpes, Grenoble, France
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24
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Almarasy AA, Yamada Y, Mashiyama Y, Maruyama H, Kimura Y, Fujimori A. Activity Maintenance Characteristics and Protease Adsorption on Langmuir Monolayer of Organo‐Modified Single‐Walled Carbon Nanotubes. ChemistrySelect 2021. [DOI: 10.1002/slct.202100862] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Affiliation(s)
- Ahmed A. Almarasy
- Graduate School of Science and Engineering Saitama University 255 Shimo-okubo, Sakura-ku Saitama 338-8570 Japan
| | - Yuna Yamada
- Faculty of Engineering Saitama University 255 Shimo-okubo, Sakura-ku Saitama 338-8570 Japan
| | - Yuki Mashiyama
- Graduate School of Science and Engineering Saitama University 255 Shimo-okubo, Sakura-ku Saitama 338-8570 Japan
| | - Haruka Maruyama
- Graduate School of Science and Engineering Saitama University 255 Shimo-okubo, Sakura-ku Saitama 338-8570 Japan
| | - Yusuke Kimura
- Graduate School of Science and Engineering Saitama University 255 Shimo-okubo, Sakura-ku Saitama 338-8570 Japan
| | - Atsuhio Fujimori
- Graduate School of Science and Engineering Saitama University 255 Shimo-okubo, Sakura-ku Saitama 338-8570 Japan
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25
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Improved adenylate cyclase activity via affinity immobilization onto co-modified GO with bio-inspired adhesive and PEI. Colloids Surf B Biointerfaces 2021; 205:111888. [PMID: 34091372 DOI: 10.1016/j.colsurfb.2021.111888] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2021] [Revised: 05/26/2021] [Accepted: 05/28/2021] [Indexed: 11/23/2022]
Abstract
Adenylate cyclase (AC) can efficiently catalyze the conversion of adenosine triphosphate (ATP) to cyclic adenosine-3', 5'-monophosphate (cAMP). However, AC directly immobilized on substrate is not desirable due to enzyme inactivation. Herein, bio-inspired adhesive of polydopamine and polyethyleneimine (PDA/PEI) was used as flexible chains to graft on graphene oxide (GO), and the AC was directionally immobilized through affinity between metal ions and his-tags of AC. The properties of modified GO and the activity of immobilized AC were studied in detail. PDA/PEI layers have been proved to improve the amino density of GO surface for affinity groups decoration and adjust the interaction between AC and support. And modified GO by this novel method contributes to subsequent grafting and immobilization of AC by affinity. AC immobilized on modified GO exhibited high activity recovery with about 90 % of free AC, while enzyme immobilized on unmodified GO has been inactivated. This study offers a versatile approach for support modification and enzyme oriented immobilization. PDA/PEI functionalized GO can be used as a promising carrier to immobilize other his-tagged enzymes.
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26
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Abstract
Lipases are ubiquitous enzymes whose physiological role is the hydrolysis of triacylglycerol into fatty acids. They are the most studied and industrially interesting enzymes, thanks to their versatility to promote a plethora of reactions on a wide range of substrates. In fact, depending on the reaction conditions, they can also catalyze synthesis reactions, such as esterification, acidolysis and transesterification. The latter is particularly important for biodiesel production. Biodiesel can be produced from animal fats or vegetable oils and is considered as a biodegradable, non-toxic and renewable energy source. The use of lipases as industrial catalysts is subordinated to their immobilization on insoluble supports, to allow multiple uses and use in continuous processes, but also to stabilize the enzyme, intrinsically prone to denaturation with consequent loss of activity. Among the materials that can be used for lipase immobilization, mesoporous silica nanoparticles represent a good choice due to the combination of thermal and mechanical stability with controlled textural characteristics. Moreover, the presence of abundant surface hydroxyl groups allows for easy chemical surface functionalization. This latter aspect has the main importance since lipases have a high affinity with hydrophobic supports. The objective of this work is to provide an overview of the recent progress of lipase immobilization in mesoporous silica nanoparticles with a focus on biodiesel production.
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Jorgenson TD, Zareie HM, Sarikaya M, Overney RM. Symbiotic assembly of peptide nano-mosaics at solid interfaces. NANOSCALE 2021; 13:7735-7743. [PMID: 33928951 DOI: 10.1039/d0nr07208g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The spontaneous co-organization of distinct biomolecules at interfaces enables many of Nature's hierarchical organizations involving both hard and soft materials. Engineering efforts to mimic such hybrid complexes rely on our ability to rationally structure biomolecules at inorganic interfaces. Control over the nanoscale structure of patterned biomolecules remains challenging due to difficulties in controlling the multifarious interactions involved. This work discusses binary peptide assembly as a means to fabricate biomolecular nano-mosaics at graphite surfaces with predictable structures. Distinct peptide-substrate interactions lead to divergent crystallographic growth directions, molecular scale immiscibility, and a symbiotic assembly phenomenon. We present a symbiotic assembly model that accurately predicts the binary assembly structure relying solely on the constituent peptide nucleation kinetics and molar fractions. The ability to tune such biomolecular nano-mosaic structures facilitates the bottom up fabrication of high-density, multifunctional interfaces for nanotechnology.
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Affiliation(s)
- Tyler D Jorgenson
- Molecular Engineering and Sciences Institute, University of Washington, Seattle, WA, USA.
| | - Hadi M Zareie
- Department of Material Science and Engineering, University of Washington, Seattle, WA, USA
| | - Mehmet Sarikaya
- Molecular Engineering and Sciences Institute, University of Washington, Seattle, WA, USA. and Department of Material Science and Engineering, University of Washington, Seattle, WA, USA
| | - René M Overney
- Molecular Engineering and Sciences Institute, University of Washington, Seattle, WA, USA. and Department of Chemical Engineering, University of Washington, Seattle, WA, USA
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Esquivel-Blanco VA, Quintanilla-Villanueva GE, Villarreal-Chiu JF, Rodríguez-Delgado JM, Rodríguez-Delgado MM. The Potential Use of a Thin Film Gold Electrode Modified with Laccases for the Electrochemical Detection of Pyrethroid Metabolite 3-Phenoxybenzaldehyde. MATERIALS 2021; 14:ma14081992. [PMID: 33921175 PMCID: PMC8071532 DOI: 10.3390/ma14081992] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/15/2021] [Revised: 04/05/2021] [Accepted: 04/09/2021] [Indexed: 11/16/2022]
Abstract
There is increasing interest in developing portable technologies to detect human health threats through hybrid materials that integrate specific bioreceptors. This work proposes an electrochemical approach for detecting 3-Phenoxybenzaldehyde (3-PBD), a biomarker for monitoring human exposure to pyrethroid pesticides. The biosensor uses laccase enzymes as an alternative recognition element by direct oxidation of 3-PBD catalysts by the enzyme onto thin-film gold electrodes. The thin-film gold electrode modified by the immobilized laccase was characterized by Fourier-transform infrared spectrometry and scanning electron microscopy. The detection method’s electrochemical parameters were established, obtaining a linear range of 5 t 50 μM, the limit of detection, and quantification of 0.061 and 2.02 μM, respectively. The proposed biosensor’s analytical performance meets the concentration of pyrethroids detected in natural environments, reflecting its potential as an alternative analytical tool for monitoring the pyrethroid insecticide’s presence.
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Affiliation(s)
- Verónica Aglaeé Esquivel-Blanco
- Universidad Autónoma de Nuevo León, Facultad de Ciencias Químicas, Laboratorio de Biotecnología, Av. Universidad S/N Ciudad Universitaria, San Nicolás de los Garza C.P. 66455, Nuevo León, Mexico; (V.A.E.-B.); (G.E.Q.-V.); (J.F.V.-C.)
- Centro de Investigación en Biotecnología y Nanotecnología (CIByN), Facultad de Ciencias Químicas, Universidad Autónoma de Nuevo León. Parque de Investigación e Innovación Tecnológica, Km. 10 Autopista al Aeropuerto Internacional Mariano Escobedo, Apodaca C.P. 66629, Nuevo León, Mexico
| | - Gabriela Elizabeth Quintanilla-Villanueva
- Universidad Autónoma de Nuevo León, Facultad de Ciencias Químicas, Laboratorio de Biotecnología, Av. Universidad S/N Ciudad Universitaria, San Nicolás de los Garza C.P. 66455, Nuevo León, Mexico; (V.A.E.-B.); (G.E.Q.-V.); (J.F.V.-C.)
- Centro de Investigación en Biotecnología y Nanotecnología (CIByN), Facultad de Ciencias Químicas, Universidad Autónoma de Nuevo León. Parque de Investigación e Innovación Tecnológica, Km. 10 Autopista al Aeropuerto Internacional Mariano Escobedo, Apodaca C.P. 66629, Nuevo León, Mexico
| | - Juan Francisco Villarreal-Chiu
- Universidad Autónoma de Nuevo León, Facultad de Ciencias Químicas, Laboratorio de Biotecnología, Av. Universidad S/N Ciudad Universitaria, San Nicolás de los Garza C.P. 66455, Nuevo León, Mexico; (V.A.E.-B.); (G.E.Q.-V.); (J.F.V.-C.)
- Centro de Investigación en Biotecnología y Nanotecnología (CIByN), Facultad de Ciencias Químicas, Universidad Autónoma de Nuevo León. Parque de Investigación e Innovación Tecnológica, Km. 10 Autopista al Aeropuerto Internacional Mariano Escobedo, Apodaca C.P. 66629, Nuevo León, Mexico
| | - José Manuel Rodríguez-Delgado
- Tecnológico de Monterrey, School of Engineering and Sciences, Av. Eugenio Garza Sada Sur No. 2501, Col. Tecnológico, Monterrey, C.P. 64849, Nuevo León, Mexico
- Correspondence: (J.M.R.-D.); (M.M.R.-D.)
| | - Melissa Marlene Rodríguez-Delgado
- Universidad Autónoma de Nuevo León, Facultad de Ciencias Químicas, Laboratorio de Biotecnología, Av. Universidad S/N Ciudad Universitaria, San Nicolás de los Garza C.P. 66455, Nuevo León, Mexico; (V.A.E.-B.); (G.E.Q.-V.); (J.F.V.-C.)
- Centro de Investigación en Biotecnología y Nanotecnología (CIByN), Facultad de Ciencias Químicas, Universidad Autónoma de Nuevo León. Parque de Investigación e Innovación Tecnológica, Km. 10 Autopista al Aeropuerto Internacional Mariano Escobedo, Apodaca C.P. 66629, Nuevo León, Mexico
- Correspondence: (J.M.R.-D.); (M.M.R.-D.)
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Monteiro RR, Virgen-Ortiz JJ, Berenguer-Murcia Á, da Rocha TN, dos Santos JC, Alcántara AR, Fernandez-Lafuente R. Biotechnological relevance of the lipase A from Candida antarctica. Catal Today 2021. [DOI: 10.1016/j.cattod.2020.03.026] [Citation(s) in RCA: 46] [Impact Index Per Article: 15.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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Carneiro T, Wrzosek K, Bettenbrock K, Lorenz H, Seidel‐Morgenstern A. Immobilization of an amino acid racemase for application in crystallization-based chiral resolutions of asparagine monohydrate. Eng Life Sci 2020; 20:550-561. [PMID: 33304228 PMCID: PMC7708953 DOI: 10.1002/elsc.202000029] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2020] [Revised: 07/15/2020] [Accepted: 08/13/2020] [Indexed: 01/04/2023] Open
Abstract
Integration of racemization and a resolution process is an attractive way to overcome yield limitations in the production of pure chiral molecules. Preferential crystallization and other crystallization-based techniques usually produce low enantiomeric excess in solution, which is a constraint for coupling with racemization. We developed an enzymatic fixed bed reactor that can potentially overcome these unfavorable conditions and improve the overall yield of preferential crystallization. Enzyme immobilization strategies were investigated on covalent-binding supports. The amino acid racemase immobilized in Purolite ECR 8309F with a load of 35 mg-enzyme/g-support showed highest specific activity (approx. 500 U/g-support) and no loss in activity in reusability tests. Effects of substrate inhibition observed for the free enzyme were overcome after immobilization. A packed bed reactor with the immobilized racemase showed good performance in steady state operation processing low enantiomeric excess inlet. Kinetic parameters from batch reactor experiments can be successfully used for prediction of packed bed reactor performance. Full conversions could be achieved for residence times above 1.1 min. The results suggest the potential of the prepared racemase reactor to be combined with preferential crystallization to improve resolution of asparagine enantiomers.
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Affiliation(s)
- Thiane Carneiro
- Max Planck Institute for Dynamics of Complex Technical SystemsMagdeburgGermany
| | - Katarzyna Wrzosek
- Max Planck Institute for Dynamics of Complex Technical SystemsMagdeburgGermany
| | - Katja Bettenbrock
- Max Planck Institute for Dynamics of Complex Technical SystemsMagdeburgGermany
| | - Heike Lorenz
- Max Planck Institute for Dynamics of Complex Technical SystemsMagdeburgGermany
| | - Andreas Seidel‐Morgenstern
- Max Planck Institute for Dynamics of Complex Technical SystemsMagdeburgGermany
- Otto‐von‐Guericke University MagdeburgMagdeburgGermany
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Yang Q, Li L, Wang B, Zhu L, Tan J. Modifying the Microenvironment of Epoxy Resin to Improve the Activity of Immobilized 7α-Hydroxysteroid Dehydrogenases. Appl Biochem Biotechnol 2020; 193:925-939. [PMID: 33225381 DOI: 10.1007/s12010-020-03473-w] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2020] [Accepted: 11/09/2020] [Indexed: 01/07/2023]
Abstract
7α-Hydroxysteroid dehydrogenase (7α-HSDH) is one of the key enzymes in the catalytic reaction of taurochenodeoxycholic acid (TCDCA). To improve the activity of immobilized 7α-HSDH, the microenvironment of immobilized 7α-HSDH was modified with epoxy resin and ethanediamine (EDA). The amino-epoxy support was characterized by Fourier transform infrared (FTIR), Spectrometer elemental analysis (EA), scanning electron microscopy (SEM), contact angle (CA), and Zetasizer. The effects of the immobilization of 7α-HSDH on the amino-epoxy resin and epoxy resin were studied. The results indicated that the relative activity of immobilized 7α-HSDH on the amino-epoxy resin increased by approximately 80%. Meanwhile, the immobilized 7α-HSDH showed favorable thermal stability and operational stability. The thermal stability of immobilized 7α-HSDH increased at temperatures ranging from 15 to 35 °C, while the relative activities of 7α-HSDH immobilized on the amino-epoxy resin and epoxy resin retained 56.4% and 61.0%. After 6 cycles, the residual activities of the 7α-HSDH immobilized on the amino-epoxy resin and epoxy resin were 81.4% and 89.5%, respectively.
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Affiliation(s)
- Qiong Yang
- Chongqing Key Laboratory of Inorganic Special Functional Materials, Yangtze Normal University, Chongqing, 408100, People's Republic of China. .,Key Laboratory of Biorheological Science and Technology (Chongqing University), Ministry of Education, College of Bioengineering, Chongqing University, No. 174, Shapingba Main Street, Chongqing, 400030, People's Republic of China.
| | - Liuying Li
- Key Laboratory of Biorheological Science and Technology (Chongqing University), Ministry of Education, College of Bioengineering, Chongqing University, No. 174, Shapingba Main Street, Chongqing, 400030, People's Republic of China
| | - Bochu Wang
- Key Laboratory of Biorheological Science and Technology (Chongqing University), Ministry of Education, College of Bioengineering, Chongqing University, No. 174, Shapingba Main Street, Chongqing, 400030, People's Republic of China.
| | - Liancai Zhu
- Key Laboratory of Biorheological Science and Technology (Chongqing University), Ministry of Education, College of Bioengineering, Chongqing University, No. 174, Shapingba Main Street, Chongqing, 400030, People's Republic of China
| | - Jun Tan
- Chongqing Key Laboratory of Medicinal Resources in the Three Gorges Reservoir Region, School of Biological & Chemical engineering, Chongqing University of Education, Chongqing, 400067, China
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Immobilization of alcohol dehydrogenase from Saccharomyces cerevisiae onto carboxymethyl dextran-coated magnetic nanoparticles: a novel route for biocatalyst improvement via epoxy activation. Sci Rep 2020; 10:19478. [PMID: 33173138 PMCID: PMC7656461 DOI: 10.1038/s41598-020-76463-x] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2020] [Accepted: 10/14/2020] [Indexed: 01/01/2023] Open
Abstract
A novel method is described for the immobilization of alcohol dehydrogenase (ADH) from Saccharomyces cerevisiae onto carboxymethyl dextran (CMD) coated magnetic nanoparticles (CMD-MNPs) activated with epoxy groups, using epichlorohydrin (EClH). EClH was used as an activating agent to bind ADH molecules on the surface of CMD-MNPs. Optimal immobilization conditions (activating agent concentration, temperature, rotation speed, medium pH, immobilization time and enzyme concentration) were set to obtain the highest expressed activity of the immobilized enzyme. ADH that was immobilized onto epoxy-activated CMD-MNPs (ADH-CMD-MNPs) maintained 90% of the expressed activity. Thermal stability of ADH-CMD-MNPS after 24 h at 20 °C and 40 °C yielded 79% and 80% of initial activity, respectively, while soluble enzyme activity was only 19% at 20 °C and the enzyme was non-active at 40 °C. Expressed activity of ADH-CMD-MNPs after 21 days of storage at 4 °C was 75%. Kinetic parameters (KM, vmax) of soluble and immobilized ADH were determined, resulting in 125 mM and 1.2 µmol/min for soluble ADH, and in 73 mM and 4.7 µmol/min for immobilized ADH.
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Deep Tumor Penetration of Doxorubicin-Loaded Glycol Chitosan Nanoparticles Using High-Intensity Focused Ultrasound. Pharmaceutics 2020; 12:pharmaceutics12100974. [PMID: 33076520 PMCID: PMC7650702 DOI: 10.3390/pharmaceutics12100974] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2020] [Revised: 10/11/2020] [Accepted: 10/14/2020] [Indexed: 12/13/2022] Open
Abstract
The dense extracellular matrix (ECM) in heterogeneous tumor tissues can prevent the deep tumor penetration of drug-loaded nanoparticles, resulting in a limited therapeutic efficacy in cancer treatment. Herein, we suggest that the deep tumor penetration of doxorubicin (DOX)-loaded glycol chitosan nanoparticles (CNPs) can be improved using high-intensity focused ultrasound (HIFU) technology. Firstly, we prepared amphiphilic glycol chitosan-5β-cholanic acid conjugates that can self-assemble to form stable nanoparticles with an average of 283.7 ± 5.3 nm. Next, the anticancer drug DOX was simply loaded into the CNPs via a dialysis method. DOX-loaded CNPs (DOX-CNPs) had stable nanoparticle structures with an average size of 265.9 ± 35.5 nm in aqueous condition. In cultured cells, HIFU-treated DOX-CNPs showed rapid drug release and enhanced cellular uptake in A549 cells, resulting in increased cytotoxicity, compared to untreated DOX-CNPs. In ECM-rich A549 tumor-bearing mice, the tumor-targeting efficacy of intravenously injected DOX-CNPs with HIFU treatment was 1.84 times higher than that of untreated DOX-CNPs. Furthermore, the deep tumor penetration of HIFU-treated DOX-CNPs was clearly observed at targeted tumor tissues, due to the destruction of the ECM structure via HIFU treatment. Finally, HIFU-treated DOX-CNPs greatly increased the therapeutic efficacy at ECM-rich A549 tumor-bearing mice, compared to free DOX and untreated DOX-CNPs. This deep penetration of drug-loaded nanoparticles via HIFU treatment is a promising strategy to treat heterogeneous tumors with dense ECM structures.
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Parlak O, Richter-Dahlfors A. Bacterial Sensing and Biofilm Monitoring for Infection Diagnostics. Macromol Biosci 2020; 20:e2000129. [PMID: 32588553 DOI: 10.1002/mabi.202000129] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2020] [Revised: 06/01/2020] [Indexed: 12/21/2022]
Abstract
Recent insights into the rapidly emerging field of bacterial sensing and biofilm monitoring for infection diagnostics are discussed as well as recent key developments and emerging technologies in the field. Electrochemical sensing of bacteria and bacterial biofilm via synthetic, natural, and engineered recognition, as well as direct redox-sensing approaches via algorithm-based optical sensing, and tailor-made optotracing technology are discussed. These technologies are highlighted to answer the very critical question: "how can fast and accurate bacterial sensing and biofilm monitoring be achieved? Following on from that: "how can these different sensing concepts be translated for use in infection diagnostics? A central obstacle to this transformation is the absence of direct and fast analysis methods that provide high-throughput results and bio-interfaces that can control and regulate the means of communication between biological and electronic systems. Here, the overall progress made to date in building such translational efforts at the level of an individual bacterial cell to a bacterial community is discussed.
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Affiliation(s)
- Onur Parlak
- AIMES-Center for the Advancement of Integrated Medical and Engineering Science, Karolinska Institutet and KTH Royal Institute of Technology, Stockholm, SE-171 77, Sweden.,Department of Neuroscience, Karolinska Institutet, Stockholm, SE-171 77, Sweden
| | - Agneta Richter-Dahlfors
- AIMES-Center for the Advancement of Integrated Medical and Engineering Science, Karolinska Institutet and KTH Royal Institute of Technology, Stockholm, SE-171 77, Sweden.,Department of Neuroscience, Karolinska Institutet, Stockholm, SE-171 77, Sweden.,Fibre and Polymer Technology, KTH Royal Institute of Technology, Stockholm, SE-100 44, Sweden
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36
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Lindeque RM, Woodley JM. The Effect of Dissolved Oxygen on Kinetics during Continuous Biocatalytic Oxidations. Org Process Res Dev 2020. [DOI: 10.1021/acs.oprd.0c00140] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Affiliation(s)
- Rowan M. Lindeque
- Department of Chemical and Biochemical Engineering, Technical University of Denmark, Kgs. Lyngby, 2800, Denmark
| | - John M. Woodley
- Department of Chemical and Biochemical Engineering, Technical University of Denmark, Kgs. Lyngby, 2800, Denmark
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Ferrand-Drake Del Castillo G, Hailes RLN, Adali-Kaya Z, Robson T, Dahlin A. Generic high-capacity protein capture and release by pH control. Chem Commun (Camb) 2020; 56:5889-5892. [PMID: 32373823 DOI: 10.1039/d0cc01250e] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Abstract
Techniques for immobilization and release of proteins are of general interest but challenging to develop. Here we show a new method for high-capacity (several μg cm-2) immobilization of proteins in polyelectrolyte brushes by multivalent hydrogen bonds. Upon increasing pH, the proteins are fully released with preserved structure and activity.
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38
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Czeslik C, Wittemann A. Adsorption mechanism, secondary structure and local distribution of proteins at polyelectrolyte brushes. Colloid Polym Sci 2020. [DOI: 10.1007/s00396-019-04590-7] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
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39
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Effect of linking arm hydrophilic/hydrophobic nature, length and end-group on the conformation and the RGD accessibility of surface-immobilized fibronectin. MATERIALS SCIENCE & ENGINEERING. C, MATERIALS FOR BIOLOGICAL APPLICATIONS 2020; 107:110335. [DOI: 10.1016/j.msec.2019.110335] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/18/2018] [Revised: 06/03/2019] [Accepted: 10/16/2019] [Indexed: 12/30/2022]
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Luo M, Li M, Jiang S, Shao H, Razal J, Wang D, Fang J. Supported growth of inorganic-organic nanoflowers on 3D hierarchically porous nanofibrous membrane for enhanced enzymatic water treatment. JOURNAL OF HAZARDOUS MATERIALS 2020; 381:120947. [PMID: 31394395 DOI: 10.1016/j.jhazmat.2019.120947] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2019] [Revised: 07/16/2019] [Accepted: 07/28/2019] [Indexed: 06/10/2023]
Abstract
Organic-inorganic nanoflower is a new type of functional material that can effectively immobilize a wide range of enzymes to form flower-like structures for various enzymatic applications with enhanced catalytic performance and stability. In order to avoid the processing inconvenience and flower structure damage caused by the particular form of these hybrid nanoflowers during material fabrication and catalytic application, different substrates have been used to carry out supported growth of hybrid nanoflowers. However, all previously used substrates have only 2-dimensional feature and only incorporate hybrid nanoflowers on surface with limited nanoflower loading. In this study, three-dimensional (3D) hierarchically porous nanofibrous PVA-co-PE membranes (HPNM) are prepared by a simple template method for effectively immobilizing laccase-Cu2(PO4)3•3H2O hybrid nanoflowers. Compared with dense nanofibre membrane with only small sized pores (<1 micron), the coexistence of both small and large sized (30-80 microns) pores of HPNM could significantly increase the nanoflower density and allow the penetrated growth of hybrid nanoflowers into the inner structure of the membrane. The hybrid nanoflower containing hierarchically porous nanofibrous membranes (HNF-HPNM) show excellent catalytic performance in degrading different types of textile dyes (reactive blue 2, acid blue 25, acid yellow 76 and indigo carmine), with a degradation efficiency of ˜99.5% for indigo carmine. In addition, the HNF-HPNM could be reused at least 14 times for indigo carmine degradation, with a negligible degradation efficiency drop from 99.48% to 98.52%. These results indicate that hierarchically porous nanofibrous membrane can be a promising type of materials for supported hybrid nanoflower growth for practical applications such as waste water treatment, dye degradation and biosensing.
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Affiliation(s)
- Mengying Luo
- Institute of Science and Technology, Wuhan Textile University, Wuhan 430200, China; Deakin University, Institute for Frontier Materials, Geelong, VIC, 3216, Australia
| | - Mufang Li
- Institute of Science and Technology, Wuhan Textile University, Wuhan 430200, China; Hebei Key Laboratory of Advanced Textile Materials & Application, Wuhan 430200, China.
| | - Shan Jiang
- Deakin University, Institute for Frontier Materials, Geelong, VIC, 3216, Australia
| | - Hao Shao
- Deakin University, Institute for Frontier Materials, Geelong, VIC, 3216, Australia
| | - Joselito Razal
- Deakin University, Institute for Frontier Materials, Geelong, VIC, 3216, Australia
| | - Dong Wang
- Institute of Science and Technology, Wuhan Textile University, Wuhan 430200, China; Hebei Key Laboratory of Advanced Textile Materials & Application, Wuhan 430200, China
| | - Jian Fang
- Deakin University, Institute for Frontier Materials, Geelong, VIC, 3216, Australia.
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Zhang K, Shao G, Yang B, Zhao C, Ma Y, Yang W. Facile fabrication of shell crosslinked microcapsule by visible light induced graft polymerization for enzyme encapsulation. Chem Commun (Camb) 2020; 56:6862-6865. [DOI: 10.1039/d0cc02225j] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A strategy to encapsulate enzymes into microcapsule fabricated by visible light-induced graft polymerization using CaCO3microparticles as template was developed.
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Affiliation(s)
- Kai Zhang
- State Key Laboratory of Chemical Resource Engineering
- Beijing University of Chemical Technology
- Beijing 100029
- China
- Beijing Laboratory of Biomedical Materials
| | - Guangjun Shao
- State Key Laboratory of Chemical Resource Engineering
- Beijing University of Chemical Technology
- Beijing 100029
- China
- Beijing Laboratory of Biomedical Materials
| | - Bowei Yang
- State Key Laboratory of Chemical Resource Engineering
- Beijing University of Chemical Technology
- Beijing 100029
- China
- Beijing Laboratory of Biomedical Materials
| | - Changwen Zhao
- State Key Laboratory of Chemical Resource Engineering
- Beijing University of Chemical Technology
- Beijing 100029
- China
- Beijing Laboratory of Biomedical Materials
| | - Yuhong Ma
- Key Laboratory of Carbon Fiber and Functional Polymers
- Ministry of Education
- Beijing University of Chemical Technology
- Beijing 100029
- China
| | - Wantai Yang
- State Key Laboratory of Chemical Resource Engineering
- Beijing University of Chemical Technology
- Beijing 100029
- China
- Beijing Laboratory of Biomedical Materials
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42
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Liao L, Meng Y, Wang R, Jia B, Li P. Coupling and Regulation of Porous Carriers Using Plasma and Amination to Improve the Catalytic Performance of Glucose Oxidase and Catalase. Front Bioeng Biotechnol 2019; 7:426. [PMID: 31921828 PMCID: PMC6923177 DOI: 10.3389/fbioe.2019.00426] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2019] [Accepted: 12/02/2019] [Indexed: 12/12/2022] Open
Abstract
Multiple enzyme systems are being increasingly used for their high-efficiency and co-immobilization is a key technology to lower the cost and improve the stability of enzymes. In this study, poly glycidyl methacrylate (PGMA) spheres were synthesized using suspension polymerization, and were used as a support to co-immobilize glucose oxidase (GOx) and catalase (CAT). Surface modification was carried out via a combination of plasma and amination to promote the properties of the catalyzer. The co-immobilized enzymes showed a more extensive range of optimum pH and temperature from 5.5 to 7.5 and 25 to 40°C, respectively, compared to free enzymes. Furthermore, the maximum activity and protein adsorption quantity of the co-immobilized enzymes reached 25.98 U/g and 6.07 mg/g, respectively. The enzymatic activity of the co-immobilized enzymes was maintained at ~70% after storage for 5 days and at 82% after three consecutive cycles, indicating that the immobilized material could be applied industrially.
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Affiliation(s)
- Lingtong Liao
- School of Bioengineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Yuling Meng
- School of Bioengineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Ruiming Wang
- School of Bioengineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
- State Key Laboratory of Biobased Material & Green Papermaking, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Baolei Jia
- School of Bioengineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Piwu Li
- School of Bioengineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
- State Key Laboratory of Biobased Material & Green Papermaking, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
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Qiao W, Liu H. Enhanced decolorization of malachite green by a magnetic graphene oxide-CotA laccase composite. Int J Biol Macromol 2019; 138:1-12. [DOI: 10.1016/j.ijbiomac.2019.07.077] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2019] [Revised: 07/10/2019] [Accepted: 07/10/2019] [Indexed: 12/31/2022]
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Gimenez GG, Silva RM, Francisco CP, Rando FDS, Dantas JH, de Souza HM, Matioli G. Immobilization of commercial cyclomaltodextrin glucanotransferase into controlled pore silica by the anchorage method and covalent bonding. Process Biochem 2019. [DOI: 10.1016/j.procbio.2019.07.002] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Bolivar JM, Nidetzky B. The Microenvironment in Immobilized Enzymes: Methods of Characterization and Its Role in Determining Enzyme Performance. Molecules 2019; 24:molecules24193460. [PMID: 31554193 PMCID: PMC6803829 DOI: 10.3390/molecules24193460] [Citation(s) in RCA: 41] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2019] [Revised: 09/17/2019] [Accepted: 09/19/2019] [Indexed: 12/11/2022] Open
Abstract
The liquid milieu in which enzymes operate when they are immobilized in solid materials can be quite different from the milieu in bulk solution. Important differences are in the substrate and product concentration but also in pH and ionic strength. The internal milieu for immobilized enzymes is affected by the chemical properties of the solid material and by the interplay of reaction and diffusion. Enzyme performance is influenced by the internal milieu in terms of catalytic rate (“activity”) and stability. Elucidation, through direct measurement of differences in the internal as compared to the bulk milieu is, therefore, fundamentally important in the mechanistic characterization of immobilized enzymes. The deepened understanding thus acquired is critical for the rational development of immobilized enzyme preparations with optimized properties. Herein we review approaches by opto-chemical sensing to determine the internal milieu of enzymes immobilized in porous particles. We describe analytical principles applied to immobilized enzymes and focus on the determination of pH and the O2 concentration. We show measurements of pH and [O2] with spatiotemporal resolution, using in operando analysis for immobilized preparations of industrially important enzymes. The effect of concentration gradients between solid particle and liquid bulk on enzyme performance is made evident and quantified. Besides its use in enzyme characterization, the method can be applied to the development of process control strategies.
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Affiliation(s)
- Juan M Bolivar
- Institute of Biotechnology and Biochemical Engineering, Graz University of Technology, NAWI Graz, Petersgasse 12, A-8010 Graz, Austria.
- Chemical and Materials Engineering Department, Complutense University of Madrid, 28040 Madrid, Spain.
| | - Bernd Nidetzky
- Institute of Biotechnology and Biochemical Engineering, Graz University of Technology, NAWI Graz, Petersgasse 12, A-8010 Graz, Austria.
- Austrian Centre of Industrial Biotechnology (acib), Petersgasse 14, A-8010 Graz, Austria.
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Abstract
The covalent immobilization of an enzyme to a solid support can broaden its applicability in various workflows. Immobilized enzymes facilitate catalyst re-use, adaptability to automation or high-throughput applications and removal of the enzyme without heat inactivation or reaction purification. In this report, we demonstrate a step-by-step procedure to carry out the bio-orthogonal immobilization of DNA modifying enzymes employing the self-labelling activity of the SNAP-tag to covalently conjugate the enzyme of interest to the solid support. We also demonstrate how modifying the surface functionality of the support can improve the activity of the immobilized enzyme. Finally, the utility of immobilized DNA-modifying enzymes is depicted through sequential processing of genomic DNA libraries for Illumina next-generation sequencing (NGS), resulting in improved read coverage across AT-rich sequences.
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Bou Haidar N, Marais S, Dé E, Schaumann A, Barreau M, Feuilloley MGJ, Duncan AC. Chronic wound healing: A specific antibiofilm protein-asymmetric release system. MATERIALS SCIENCE & ENGINEERING. C, MATERIALS FOR BIOLOGICAL APPLICATIONS 2019; 106:110130. [PMID: 31753364 DOI: 10.1016/j.msec.2019.110130] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/30/2019] [Revised: 08/02/2019] [Accepted: 08/23/2019] [Indexed: 02/06/2023]
Abstract
Chronic infection is a major cause of delayed wound-healing. It is recognized to be associated with infectious bacterial communities called biofilms. Currently used conventional antibiotics alone often reveal themselves ineffective, since they do not specifically target the wound biofilm. Here, we report a new conceptual tool aimed at overcoming this drawback: an antibiofilm drug delivery system targeting the bacterial biofilm as a whole, by inhibiting its formation and/or disrupting it once it is formed. The system consists of a micro/nanostructured poly(butylene-succinate-co-adipate) (PBSA)-based asymmetric membrane (AM) with controlled porosity. By the incorporation of hydrophilic porogen agents, polyvinylpyrrolidone (PVP) and polyethylene glycol (PEG), we were able to obtain AMs with high levels of porosity, exhibiting interconnections between pores. The PBSA-PEG membrane presented a dense upper layer with pores small enough to block bacteria penetration. Upon using such porogen agents, under dry and wet conditions, membrane's integrity and mechanical properties were maintained. Using bovine serum albumin (BSA) as a model protein, we demonstrated that protein loading and release from PBSA membranes were affected by the membrane structure (porosity) and the presence of residual porogen. Furthermore, the release curve profile consisted of a fast initial slope followed by a second slow phase approaching a plateau within 24 h. This can be highly beneficial for the promotion of wound healing. Cross-sectional confocal laser scanning microscopy (CLSM) images revealed a heterogeneous distribution of fluorescein isothiocyanate (FITC) labeled BSA throughout the entire membrane. PBSA membranes were loaded with dispersin B (DB), a specific antibiofilm matrix enzyme. Studies using a Staphylococcus epidermidis model, indicate significant efficiency in both inhibiting or dispersing preformed biofilm (up to 80 % eradication). The asymmetric PBSA membrane prepared with the PVP porogen (PBSA-PVP) displayed highest antibiofilm activity. Moreover, in vitro cytotoxicity assays using HaCaT and reconstructed human epidermis (RHE) models revealed that unloaded and DB-loaded PBSA-PVP membranes had excellent biocompatibility suitable for wound dressing applications.
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Affiliation(s)
- Naila Bou Haidar
- Normandie Univ, UNIRouen Normandie, INSA Rouen, CNRS, PBS, 76000 Rouen, France
| | - Stéphane Marais
- Normandie Univ, UNIRouen Normandie, INSA Rouen, CNRS, PBS, 76000 Rouen, France
| | - Emmanuelle Dé
- Normandie Univ, UNIRouen Normandie, INSA Rouen, CNRS, PBS, 76000 Rouen, France
| | - Annick Schaumann
- Normandie Univ, UNIRouen Normandie, INSA Rouen, CNRS, PBS, 76000 Rouen, France
| | - Magalie Barreau
- Normandie Univ, UNIRouen Normandie, LMSM EA4312, 27000 Evreux, France
| | | | - Anthony C Duncan
- Normandie Univ, UNIRouen Normandie, INSA Rouen, CNRS, PBS, 76000 Rouen, France.
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48
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Coglitore D, Janot JM, Balme S. Protein at liquid solid interfaces: Toward a new paradigm to change the approach to design hybrid protein/solid-state materials. Adv Colloid Interface Sci 2019; 270:278-292. [PMID: 31306853 DOI: 10.1016/j.cis.2019.07.004] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2019] [Revised: 07/04/2019] [Accepted: 07/05/2019] [Indexed: 10/26/2022]
Abstract
This review gives an overview of protein adsorption at solid/liquid interface. Compared to the other ones, we have focus on three main questions with the point of view of the protein. The first question is related to the kinetic and especially the using of Langmuir model to describe the protein adsorption. The second question is about the concept of hard and soft protein. In this part, we report the protein structural modification induced by adsorption regarding their intrinsic structure. This allows formulating of a new concept to classify the protein to predict their behavior at solid/liquid interface. The last question is related to the protein corona. We give an overview about the soft/hard corona and attempt to make correlation with the concept of hard/soft protein.
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Briones X, Villalobos V, Queneau Y, Danna CS, Muñoz R, Ríos HE, Pavez J, Páez M, Cabrera R, Tamayo L, Urzúa MD. Surfaces based on amino acid functionalized polyelectrolyte films towards active surfaces for enzyme immobilization. MATERIALS SCIENCE & ENGINEERING. C, MATERIALS FOR BIOLOGICAL APPLICATIONS 2019; 104:109938. [PMID: 31499948 DOI: 10.1016/j.msec.2019.109938] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 01/22/2019] [Revised: 05/14/2019] [Accepted: 07/02/2019] [Indexed: 12/12/2022]
Abstract
Surface based on polyelectrolytes functionalized with amino acids onto amino-terminated solid surfaces of silicon wafers was prepared, with the purpose of evaluate the chemical functionality of the polyelectrolyte films in adsorption and catalytic activity of an enzyme. In this work, the adsorption of the enzyme glucose 6-phosphate dehydrogenase from Leuconostoc mesenteroides (LmG6PD) was studied as model. The polyelectrolytes were obtained from poly (maleic anhydride-alt-vinylpyrrolidone) [poly(MA-alt-VP)] and functionalized with amino acids of different hydropathy index: glutamine (Gln), tyrosine (Tyr) and methionine (Met). The polyelectrolytes were adsorbed onto the amino-terminated silicon wafer at pH 3.5 and 4.5 and at low and high ionic strength. At low ionic strength and pH 3.5, the largest quantity of adsorbed polyelectrolyte was on the films containing glutamine moiety as the most hydrophilic amino acid in the side chain of polymer chain (5.88 mg/m2), whereas at high ionic strength and pH 4.5, the lowest quantity was in films containing tyrosine moiety in the side chain (1.88 mg/m2). The films were characterized by ellipsometry, contact angle measurements and atomic force microscopy (AFM). The polyelectrolyte films showed a moderate degree of hydrophobicity, the methionine derivative being the most hydrophobic film. With the aim of evaluate the effect of the amino acid moieties on the ability of the surface to adsorb enzymes, we study the activity of the enzyme on these surfaces. We observed that the polarity of the side chain of the amino acid in the polyelectrolyte affected the quantity of LmG6PD adsorbed, as well as its specific activity, showing that films prepared from poly(MA-alt-VP) functionalized with Met provide the best enzymatic performance. The results obtained demonstrated that the surfaces prepared from polyelectrolytes functionalized with amino acids could be an attractive and simple platform for the immobilization of enzymes, which could be of interest for biocatalysis applications.
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Affiliation(s)
- Ximena Briones
- Departamento de Química, Facultad de Ciencias, Universidad de Chile, Las Palmeras 3425, Casilla 653, Santiago 7800003, Chile; Centro de Química Médica, Facultad de Medicina, Clínica Alemana Universidad del Desarrollo, Las Condes 12438 Lo Barnechea, Santiago 7710162, Chile
| | - Valeria Villalobos
- Universidad Autónoma de Chile, Instituto de Ciencias Químicas Aplicadas, Facultad de Ingeniería, El Llano Subercaseaux 2801, San Miguel, Chile des 12438 Lo Barnechea, Santiago 7710162, Chile
| | - Yves Queneau
- Institut de Chimie et Biochimie Moléculaires et Supramoléculaires, Univ Lyon, ICBMS, UMR 5246 CNRS, Université Lyon 1, INSA Lyon, CPE Lyon, 1 rue Victor grignard, Bâtiment Lederer, Université Claude Bernard, 69622 Villeurbanne cedex, France
| | - Caroline Silva Danna
- Departamento de Química, Facultad de Ciencias, Universidad de Chile, Las Palmeras 3425, Casilla 653, Santiago 7800003, Chile
| | - Rodrigo Muñoz
- Departamento de Biología, Facultad de Ciencias, Universidad de Chile, Las Palmeras 3425, Casilla 653, Santiago, Chile
| | - Hernán E Ríos
- Departamento de Química, Facultad de Ciencias, Universidad de Chile, Las Palmeras 3425, Casilla 653, Santiago 7800003, Chile
| | - Jorge Pavez
- Departamento de Química de los Materiales, Facultad de Química y Biología, Universidad de Santiago de Chile, Soft Matter Research-Technology Center, SMAT-C, Av. B. O'Higgins 3363, Santiago, Chile
| | - Maritza Páez
- Departamento de Química de los Materiales, Facultad de Química y Biología, Universidad de Santiago de Chile, Soft Matter Research-Technology Center, SMAT-C, Av. B. O'Higgins 3363, Santiago, Chile
| | - Ricardo Cabrera
- Departamento de Biología, Facultad de Ciencias, Universidad de Chile, Las Palmeras 3425, Casilla 653, Santiago, Chile.
| | - Laura Tamayo
- Departamento de Química, Facultad de Ciencias, Universidad de Chile, Las Palmeras 3425, Casilla 653, Santiago 7800003, Chile.
| | - Marcela D Urzúa
- Departamento de Química, Facultad de Ciencias, Universidad de Chile, Las Palmeras 3425, Casilla 653, Santiago 7800003, Chile.
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High-pressure study of magnetic nanoparticles with a polyelectrolyte brush as carrier particles for enzymes. Colloids Surf B Biointerfaces 2019; 182:110344. [PMID: 31284146 DOI: 10.1016/j.colsurfb.2019.110344] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2019] [Revised: 06/19/2019] [Accepted: 07/02/2019] [Indexed: 11/20/2022]
Abstract
The recovery of enzymes from a reaction medium can be achieved in a convenient way by using magnetic nanoparticles (MNP) as carriers. Here, we present MNP with a polyelectrolyte brush composed of poly(ethylene imine) (PEI) to provide a benign environment for the immobilized enzyme molecules. Yeast alcohol dehydrogenase (ADH) has been tested for enzymatic activity when it is free in solution or adsorbed on the PEI brush-MNP. Furthermore, the effect of pressure on the enzymatic activity has been studied to reveal activation volumes, which are a sensitive probe of the transition state geometry. The results of this study indicate that the secondary structure of ADH is pressure-stable up to 9 kbar. The enzymatic activity of ADH can be analyzed using Michaelis-Menten kinetics free in solution and adsorbed on the PEI brush-MNP. Remarkably, no significant changes of the Michaelis constant and the activation volume are observed upon adsorption. Thus, it can be assumed that the turnover number of ADH is also the same in the free and adsorbed state. However, the maximum enzymatic rate is reduced when ADH is adsorbed, which must be explained by a lower effective enzyme concentration due to steric hindrance of the enzyme inside the PEI brush of the MNP. In this way, the pressure experiments carried out in this study enable a distinction between steric and kinetic effects on the enzymatic rate of adsorbed ADH.
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