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Spinelli A, Carrano FM, Laino ME, Andreozzi M, Koleth G, Hassan C, Repici A, Chand M, Savevski V, Pellino G. Artificial intelligence in colorectal surgery: an AI-powered systematic review. Tech Coloproctol 2023; 27:615-629. [PMID: 36805890 DOI: 10.1007/s10151-023-02772-8] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/14/2022] [Accepted: 02/07/2023] [Indexed: 02/23/2023]
Abstract
Artificial intelligence (AI) has the potential to revolutionize surgery in the coming years. Still, it is essential to clarify what the meaningful current applications are and what can be reasonably expected. This AI-powered review assessed the role of AI in colorectal surgery. A Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA)-compliant systematic search of PubMed, Embase, Scopus, Cochrane Library databases, and gray literature was conducted on all available articles on AI in colorectal surgery (from January 1 1997 to March 1 2021), aiming to define the perioperative applications of AI. Potentially eligible studies were identified using novel software powered by natural language processing (NLP) and machine learning (ML) technologies dedicated to systematic reviews. Out of 1238 articles identified, 115 were included in the final analysis. Available articles addressed the role of AI in several areas of interest. In the preoperative phase, AI can be used to define tailored treatment algorithms, support clinical decision-making, assess the risk of complications, and predict surgical outcomes and survival. Intraoperatively, AI-enhanced surgery and integration of AI in robotic platforms have been suggested. After surgery, AI can be implemented in the Enhanced Recovery after Surgery (ERAS) pathway. Additional areas of applications included the assessment of patient-reported outcomes, automated pathology assessment, and research. Available data on these aspects are limited, and AI in colorectal surgery is still in its infancy. However, the rapid evolution of technologies makes it likely that it will increasingly be incorporated into everyday practice.
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Affiliation(s)
- A Spinelli
- IRCCS Humanitas Research Hospital, via Manzoni 56, 20089, Rozzano, MI, Italy.
- Department of Biomedical Sciences, Humanitas University, Via Rita Levi Montalcini 4, 20090, Pieve Emanuele, MI, Italy.
| | - F M Carrano
- IRCCS Humanitas Research Hospital, via Manzoni 56, 20089, Rozzano, MI, Italy
| | - M E Laino
- Artificial Intelligence Center, Humanitas Clinical and Research Center-IRCCS, Via A. Manzoni 56, 20089, Rozzano, MI, Italy
| | - M Andreozzi
- Department of Clinical Medicine and Surgery, University "Federico II" of Naples, Naples, Italy
| | - G Koleth
- Department of Gastroenterology and Hepatology, Hospital Selayang, Selangor, Malaysia
| | - C Hassan
- IRCCS Humanitas Research Hospital, via Manzoni 56, 20089, Rozzano, MI, Italy
| | - A Repici
- IRCCS Humanitas Research Hospital, via Manzoni 56, 20089, Rozzano, MI, Italy
| | - M Chand
- Wellcome EPSRC Centre for Interventional and Surgical Sciences (WEISS), University College London, London, UK
| | - V Savevski
- Artificial Intelligence Center, Humanitas Clinical and Research Center-IRCCS, Via A. Manzoni 56, 20089, Rozzano, MI, Italy
| | - G Pellino
- Department of Advanced Medical and Surgical Sciences, Università degli Studi della Campania "Luigi Vanvitelli", Naples, Italy
- Colorectal Surgery, Vall d'Hebron University Hospital, Universitat Autonoma de Barcelona UAB, Barcelona, Spain
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2
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Bejan V, Pîslaru M, Scripcariu V. Diagnosis of Peritoneal Carcinomatosis of Colorectal Origin Based on an Innovative Fuzzy Logic Approach. Diagnostics (Basel) 2022; 12:1285. [PMID: 35626439 PMCID: PMC9140813 DOI: 10.3390/diagnostics12051285] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2022] [Revised: 05/08/2022] [Accepted: 05/16/2022] [Indexed: 02/04/2023] Open
Abstract
Colorectal cancer represents one of the most important causes worldwide of cancer related morbidity and mortality. One of the complications which can occur during cancer progression, is peritoneal carcinomatosis. In the majority of cases, it is diagnosed in late stages due to the lack of diagnostic tools capable of revealing the early-stage peritoneal burden. Therefore, still associates with poor prognosis and quality of life, despite recent therapeutic advances. The aim of the study was to develop a fuzzy logic approach to assess the probability of peritoneal carcinomatosis presence using routine blood test parameters as input data. The patient data was acquired retrospective from patients diagnosed between 2010-2021. The developed model focuses on the specific quantitative alteration of these parameters in the presence of peritoneal carcinomatosis, which is an innovative approach as regards the literature in the field and validates the feasibility of using a fuzzy logic approach in the noninvasive diagnosis of peritoneal carcinomatosis.
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Affiliation(s)
- Valentin Bejan
- Department of Surgery, Faculty of Medicine, “Gr. T. Popa” University of Medicine and Farmacy of Iași, 700115 Iasi, Romania;
| | - Marius Pîslaru
- Department of Engineering and Management, Faculty of Industrial Design and Business Management, “Gheorghe Asachi” Technical University of Iași, 700050 Iasi, Romania;
| | - Viorel Scripcariu
- Department of Surgery, Faculty of Medicine, “Gr. T. Popa” University of Medicine and Farmacy of Iași, 700115 Iasi, Romania;
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3
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Dr. Flynxz – A First Aid Mamdani-Sugeno-type fuzzy expert system for differential symptoms-based diagnosis. JOURNAL OF KING SAUD UNIVERSITY - COMPUTER AND INFORMATION SCIENCES 2022. [DOI: 10.1016/j.jksuci.2020.04.016] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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4
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Salem H, Soria D, Lund JN, Awwad A. A systematic review of the applications of Expert Systems (ES) and machine learning (ML) in clinical urology. BMC Med Inform Decis Mak 2021; 21:223. [PMID: 34294092 PMCID: PMC8299670 DOI: 10.1186/s12911-021-01585-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2021] [Accepted: 07/08/2021] [Indexed: 12/22/2022] Open
Abstract
BACKGROUND Testing a hypothesis for 'factors-outcome effect' is a common quest, but standard statistical regression analysis tools are rendered ineffective by data contaminated with too many noisy variables. Expert Systems (ES) can provide an alternative methodology in analysing data to identify variables with the highest correlation to the outcome. By applying their effective machine learning (ML) abilities, significant research time and costs can be saved. The study aims to systematically review the applications of ES in urological research and their methodological models for effective multi-variate analysis. Their domains, development and validity will be identified. METHODS The PRISMA methodology was applied to formulate an effective method for data gathering and analysis. This study search included seven most relevant information sources: WEB OF SCIENCE, EMBASE, BIOSIS CITATION INDEX, SCOPUS, PUBMED, Google Scholar and MEDLINE. Eligible articles were included if they applied one of the known ML models for a clear urological research question involving multivariate analysis. Only articles with pertinent research methods in ES models were included. The analysed data included the system model, applications, input/output variables, target user, validation, and outcomes. Both ML models and the variable analysis were comparatively reported for each system. RESULTS The search identified n = 1087 articles from all databases and n = 712 were eligible for examination against inclusion criteria. A total of 168 systems were finally included and systematically analysed demonstrating a recent increase in uptake of ES in academic urology in particular artificial neural networks with 31 systems. Most of the systems were applied in urological oncology (prostate cancer = 15, bladder cancer = 13) where diagnostic, prognostic and survival predictor markers were investigated. Due to the heterogeneity of models and their statistical tests, a meta-analysis was not feasible. CONCLUSION ES utility offers an effective ML potential and their applications in research have demonstrated a valid model for multi-variate analysis. The complexity of their development can challenge their uptake in urological clinics whilst the limitation of the statistical tools in this domain has created a gap for further research studies. Integration of computer scientists in academic units has promoted the use of ES in clinical urological research.
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Affiliation(s)
- Hesham Salem
- Urological Department, NIHR Nottingham Biomedical Research Centre, School of Medicine, University of Nottingham, Nottingham, NG72UH, UK
- University Hospitals of Derby and Burton NHS Foundation Trust, Royal Derby Hospital, University of Nottingham, Derby, DE22 3DT, UK
| | - Daniele Soria
- School of Computer Science and Engineering, University of Westminster, London, W1W 6UW, UK
| | - Jonathan N Lund
- University Hospitals of Derby and Burton NHS Foundation Trust, Royal Derby Hospital, University of Nottingham, Derby, DE22 3DT, UK
| | - Amir Awwad
- NIHR Nottingham Biomedical Research Centre, Sir Peter Mansfield Imaging Centre, School of Medicine, University of Nottingham, Nottingham, NG72UH, UK.
- Department of Medical Imaging, London Health Sciences Centre, University of Hospital, Schulich School of Medicine and Dentistry, Western University, London, ON, Canada.
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5
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Zhang Q, Bu X, Zhang M, Zhang Z, Hu J. Dynamic uncertain causality graph for computer-aided general clinical diagnoses with nasal obstruction as an illustration. Artif Intell Rev 2020. [DOI: 10.1007/s10462-020-09871-0] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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6
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Dong X, Du H, Guan H, Zhang X. Multiscale Time-Sharing Elastography Algorithms and Transfer Learning of Clinicopathological Features of Uterine Cervical Cancer for Medical Intelligent Computing System. J Med Syst 2019; 43:310. [PMID: 31448390 DOI: 10.1007/s10916-019-1433-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2019] [Accepted: 08/07/2019] [Indexed: 10/26/2022]
Abstract
Intelligent medical diagnosis and computing system faces many challenges in complex object recognition, large-scale data imaging and real-time diagnosis, such as poor real-time computing, low efficiency of data storage and low recognition rate of lesions. In order to solve the above problems, this paper proposes a medical intelligent computing system and a series of algorithms for the clinical pathology of cervical cancer based on the multi-scale imaging and transfer learning framework. Firstly, based on data dimensions, imaging errors and other factors, this paper designs a multi-scale time-sharing elastic imaging algorithm based on image reconstruction time and data sample characteristics. Then, taking the burst imaging cohort and the calculation data set of new cervical cancer cases as the objects, based on the difficulties of cervical cancer feature modeling, this paper proposes the transfer learning algorithm of clinical and pathological features of cervical cancer. Finally, a medical intelligent computing system for cervical cancer pathology analysis and calculation with high efficiency and reliability is established. A series of proposed algorithms are compared with single-scale Retinex (SSR), which is based on single-scale Retinex migration learning (SSR-TL). The experimental results show that the proposed algorithm in cervical cancer pathological imaging and scoring, as well as the feature extraction and recognition of lesions, especially the efficiency of system execution, is obviously due to the comparison algorithm.
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Affiliation(s)
- Xiaojun Dong
- Hunan University of Medicine, Huaihua, 418000, China.
| | - Hongmei Du
- The First People's Hospital of Huaihua, City, Huaihua, 418000, China
| | - Haichen Guan
- Hunan University of Medicine, Huaihua, 418000, China
| | - Xuezhen Zhang
- The First People's Hospital of Huaihua, City, Huaihua, 418000, China
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7
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Computational intelligence-based model for diarrhea prediction using Demographic and Health Survey data. Soft comput 2019. [DOI: 10.1007/s00500-019-04293-9] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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8
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Trotta GF, Pellicciari R, Boccaccio A, Brunetti A, Cascarano GD, Manghisi VM, Fiorentino M, Uva AE, Defazio G, Bevilacqua V. A neural network-based software to recognise blepharospasm symptoms and to measure eye closure time. Comput Biol Med 2019; 112:103376. [PMID: 31386970 DOI: 10.1016/j.compbiomed.2019.103376] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2019] [Revised: 07/30/2019] [Accepted: 07/30/2019] [Indexed: 11/17/2022]
Abstract
Blepharospasm (BSP) is an adult-onset focal dystonia with phenomenologically heterogeneous effects, including, but not limited to, blinks, brief or prolonged spasms, and a narrowing or closure of the eyelids. In spite of the clear and well-known symptomatology, objectively rating the severity of this dystonia is a rather complex task since BSP symptoms are so subtle and hardly perceptible that even expert neurologists can rate the gravity of the pathology differently in the same patients. Software tools have been developed to help clinicians in the rating procedure. Currently, a computerised video-based system is available that is capable of objectively determining the eye closure time, however, it cannot distinguish the typical symptoms of the pathology. In this study, we attempt to take a step forward by proposing a neural network-based software able not only to measure the eye closure, time but also to recognise and count the typical blepharospasm symptoms. The software, after detecting the state of the eyes (open or closed), the movement of specific facial landmarks, and properly implementing artificial neural networks with an optimised topology, can recognise blinking, and brief and prolonged spasms. Comparing the software predictions with the observations of an expert neurologist allowed assessment of the sensitivity and specificity of the proposed software. The levels of sensitivity were high for recognising brief and prolonged spasms but were lower in the case of blinks. The proposed software is an automatic tool capable of making objective 'measurements' of blepharospasm symptoms.
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Affiliation(s)
- Gianpaolo F Trotta
- Dipartimento di Meccanica, Matematica e Management, Politecnico di Bari, Bari, Italy
| | - Roberta Pellicciari
- Dipartimento di Scienze Mediche di Base, Neuroscienze ed Organi di Senso, Università degli Studi di Bari, Bari, Italy
| | - Antonio Boccaccio
- Dipartimento di Meccanica, Matematica e Management, Politecnico di Bari, Bari, Italy.
| | - Antonio Brunetti
- Dipartimento di Ingegneria Elettrica e dell'Informazione, Politecnico di Bari, Bari, Italy
| | - Giacomo D Cascarano
- Dipartimento di Ingegneria Elettrica e dell'Informazione, Politecnico di Bari, Bari, Italy
| | - Vito M Manghisi
- Dipartimento di Meccanica, Matematica e Management, Politecnico di Bari, Bari, Italy
| | - Michele Fiorentino
- Dipartimento di Meccanica, Matematica e Management, Politecnico di Bari, Bari, Italy
| | - Antonio E Uva
- Dipartimento di Meccanica, Matematica e Management, Politecnico di Bari, Bari, Italy
| | - Giovanni Defazio
- Dipartimento di Scienze Mediche e Sanità Pubblica, Università degli Studi di Cagliari, Cagliari, Italy
| | - Vitoantonio Bevilacqua
- Dipartimento di Ingegneria Elettrica e dell'Informazione, Politecnico di Bari, Bari, Italy
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9
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Walczak S. Artificial Neural Networks. ADVANCED METHODOLOGIES AND TECHNOLOGIES IN ARTIFICIAL INTELLIGENCE, COMPUTER SIMULATION, AND HUMAN-COMPUTER INTERACTION 2019. [DOI: 10.4018/978-1-5225-7368-5.ch004] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
This chapter examines the history of artificial neural networks research through the present day. The components of artificial neural network architectures and both unsupervised and supervised learning methods are discussed. Although a step-by-step tutorial of how to develop artificial neural networks is not included, additional reading suggestions covering artificial neural network development are provided. The advantages and disadvantages of artificial neural networks for research and real-world applications are presented as well as potential solutions to many of the disadvantages. Future research directions for the field of artificial neural networks are presented.
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10
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Yadollahpour A, Nourozi J, Mirbagheri SA, Simancas-Acevedo E, Trejo-Macotela FR. Designing and Implementing an ANFIS Based Medical Decision Support System to Predict Chronic Kidney Disease Progression. Front Physiol 2018; 9:1753. [PMID: 30574095 PMCID: PMC6291481 DOI: 10.3389/fphys.2018.01753] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2018] [Accepted: 11/20/2018] [Indexed: 11/13/2022] Open
Abstract
Background and objective: Chronic kidney disease (CKD) has a covert nature in its early stages that could postpone its diagnosis. Early diagnosis can reduce or prevent the progression of renal damage. The present study introduces an expert medical decision support system (MDSS) based on adaptive neuro-fuzzy inference system (ANFIS) to predict the timeframe of renal failure. Methods: The core system of the MDSS is a Takagi-Sugeno type ANFIS model that predicts the glomerular filtration rate (GFR) values as the biological marker of the renal failure. The model uses 10-year clinical records of newly diagnosed CKD patients and considers the threshold value of 15 cc/kg/min/1.73 m2 of GFR as the marker of renal failure. Following the evaluation of 10 variables, the ANFIS model uses the weight, diastolic blood pressure, and diabetes mellitus as underlying disease, and current GFR(t) as the inputs of the predicting model to predict the GFR values at future intervals. Then, a user-friendly graphical user interface of the model was built in MATLAB, in which the user can enter the physiological parameters obtained from patient recordings to determine the renal failure time as the output. Results: Assessing the performance of the MDSS against the real data of male and female CKD patients showed that this decision support model could accurately estimate GFR variations in all sequential periods of 6, 12, and 18 months, with a normalized mean absolute error lower than 5%. Despite the high uncertainties of the human body and the dynamic nature of CKD progression, our model can accurately predict the GFR variations at long future periods. Conclusions: The MDSS GUI could be useful in medical centers and used by experts to predict renal failure progression and, through taking effective actions, CKD can be prevented or effectively delayed.
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Affiliation(s)
- Ali Yadollahpour
- Department of Medical Physics, School of Medicine, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran
| | - Jamshid Nourozi
- Department of Environmental and Energy, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | - Seyed Ahmad Mirbagheri
- Department of Civil and Environmental Engineering, K. N. Toosi University of Technology, Tehran, Iran
| | - Eric Simancas-Acevedo
- Telematics Engineering Department, Polytechnic University of Pachuca, Zempoala, Mexico
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11
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Arani LA, Hosseini A, Asadi F, Masoud SA, Nazemi E. Intelligent Computer Systems for Multiple Sclerosis Diagnosis: a Systematic Review of Reasoning Techniques and Methods. Acta Inform Med 2018; 26:258-264. [PMID: 30692710 PMCID: PMC6311112 DOI: 10.5455/aim.2018.26.258-264] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2018] [Accepted: 11/22/2018] [Indexed: 01/24/2023] Open
Abstract
OBJECTIVE Intelligent computer systems are used in diagnosing Multiple Sclerosis and help physicians in the accurate and timely diagnosis of the disease. This study focuses on a review of different reasoning techniques and methods used in intelligent systems to diagnose MS and analyze the application and efficiency of different reasoning methods in order to find the most efficient and applicable methods and techniques for MS diagnosis. METHODS A complete research was carried out on articles in various electronic databases based on Mesh vocabulary. 85 articles out of 614 articles published in English between 2000 to 2018 were analyzed, 30 of which have been selected based on inclusion criteria such as system scope and domain, full description of reasoning method and system evaluation. RESULTS Results indicate that different reasoning methods are used unintelligent systems of MS diagnosis. In 27% of the studies, the rule-based method was used, in 20% the fuzzy logic method, in 18%the artificial neural network method, and in 35% other reasoning methods were used. The average sensitivity, specificity and accuracy of reasoning methods were0.91, 0.77, and 0.86, respectively. CONCLUSIONS Rule-based, fuzzy-logic and artificial neural network methods have had more applications in intelligent systems for the diagnosis of MS, respectively. The highest rate of sensitivity and accuracy indexes is associated to the neural network reasoning method at 0.97 and 0.99, respectively .In the fuzzy logic method, the Kappa rate has been reported as one, which shows full conformity between software diagnosis and the physician's decision .In some articles, in order to remove the limitations of the methods and enhance their efficiency, combinations of different methods are used.
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Affiliation(s)
- Leila Akramian Arani
- Health Information Technology and Management Department, School of Allied Medical Sciences. Shahid Beheshti University of Medical Sciences.Tehran.Iran
| | - Azamossadat Hosseini
- Health Information Technology and Management Department, School of Allied Medical Sciences. Shahid Beheshti University of Medical Sciences.Tehran.Iran
| | - Farkhondeh Asadi
- Health Information Technology and Management Department, School of Allied Medical Sciences. Shahid Beheshti University of Medical Sciences.Tehran.Iran
| | - Seyed Ali Masoud
- Neurology Department .Kashan University of Medical Sciences and health services. kashan.iran
| | - Eslam Nazemi
- Computer Science and Engineering Department, Shahid Beheshti University. Tehran.Iran
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12
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Ahmadi H, Gholamzadeh M, Shahmoradi L, Nilashi M, Rashvand P. Diseases diagnosis using fuzzy logic methods: A systematic and meta-analysis review. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2018; 161:145-172. [PMID: 29852957 DOI: 10.1016/j.cmpb.2018.04.013] [Citation(s) in RCA: 51] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2017] [Revised: 03/18/2018] [Accepted: 04/17/2018] [Indexed: 06/08/2023]
Abstract
BACKGROUND AND OBJECTIVE Diagnosis as the initial step of medical practice, is one of the most important parts of complicated clinical decision making which is usually accompanied with the degree of ambiguity and uncertainty. Since uncertainty is the inseparable nature of medicine, fuzzy logic methods have been used as one of the best methods to decrease this ambiguity. Recently, several kinds of literature have been published related to fuzzy logic methods in a wide range of medical aspects in terms of diagnosis. However, in this context there are a few review articles that have been published which belong to almost ten years ago. Hence, we conducted a systematic review to determine the contribution of utilizing fuzzy logic methods in disease diagnosis in different medical practices. METHODS Eight scientific databases are selected as an appropriate database and Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) method was employed as the basis method for conducting this systematic and meta-analysis review. Regarding the main objective of this research, some inclusion and exclusion criteria were considered to limit our investigation. To achieve a structured meta-analysis, all eligible articles were classified based on authors, publication year, journals or conferences, applied fuzzy methods, main objectives of the research, problems and research gaps, tools utilized to model the fuzzy system, medical disciplines, sample sizes, the inputs and outputs of the system, findings, results and finally the impact of applied fuzzy methods to improve diagnosis. Then, we analyzed the results obtained from these classifications to indicate the effect of fuzzy methods in decreasing the complexity of diagnosis. RESULTS Consequently, the result of this study approved the effectiveness of applying different fuzzy methods in diseases diagnosis process, presenting new insights for researchers about what kind of diseases which have been more focused. This will help to determine the diagnostic aspects of medical disciplines that are being neglected. CONCLUSIONS Overall, this systematic review provides an appropriate platform for further research by identifying the research needs in the domain of disease diagnosis.
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Affiliation(s)
- Hossein Ahmadi
- Department of Health Information Management, School of Health Management and Information Sciences, Iran University of Medical Sciences, Tehran, Iran ; Health Information Management Department, School of Allied Medical Sciences, Tehran University of Medical Sciences-International Campus (TUMS-IC), No #17, 5th Floor, Farredanesh Alley, Ghods St, Enghelab Ave, Tehran, Iran
| | - Marsa Gholamzadeh
- Health Information Management Department, School of Allied Medical Sciences, Tehran University of Medical Sciences, No #17, 5th Floor, Farredanesh Alley, Ghods St, Enghelab Ave, Tehran, Iran.
| | - Leila Shahmoradi
- Health Information Management Department, School of Allied Medical Sciences, Tehran University of Medical Sciences, No #17, 5th Floor, Farredanesh Alley, Ghods St, Enghelab Ave, Tehran, Iran
| | - Mehrbakhsh Nilashi
- Faculty of Computing, Universiti Teknologi Malaysia, 81310 Skudai, Johor, Malaysia; Young Researchers and Elite Club, Yasooj Branch, Islamic Azad University, Yasooj, Iran; Department of Computer Engineering, Lahijan Branch, Islamic Azad University, Lahijan, Iran.
| | - Pooria Rashvand
- Department of Civil Engineering, Qazvin Branch, Islamic Azad University, Qzavin, Iran
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13
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Walczak S. The Role of Artificial Intelligence in Clinical Decision Support Systems and a Classification Framework. ACTA ACUST UNITED AC 2018. [DOI: 10.4018/ijccp.2018070103] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Clinical decision support systems are meant to improve the quality of decision-making in healthcare. Artificial intelligence is the science of creating intelligent systems that solve complex problems at the level of or better than human experts. Combining artificial intelligence methods into clinical decision support will enable the utilization of large quantities of data to produce relevant decision-making information to practitioners. This article examines various artificial intelligence methodologies and shows how they may be incorporated into clinical decision-making systems. A framework for describing artificial intelligence applications in clinical decision support systems is presented.
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14
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Jung WM, Park IS, Lee YS, Kim CE, Lee H, Hahm DH, Park HJ, Jang BH, Chae Y. Characterization of hidden rules linking symptoms and selection of acupoint using an artificial neural network model. Front Med 2018; 13:112-120. [PMID: 29651775 DOI: 10.1007/s11684-017-0582-z] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2016] [Accepted: 08/15/2017] [Indexed: 01/04/2023]
Abstract
Comprehension of the medical diagnoses of doctors and treatment of diseases is important to understand the underlying principle in selecting appropriate acupoints. The pattern recognition process that pertains to symptoms and diseases and informs acupuncture treatment in a clinical setting was explored. A total of 232 clinical records were collected using a Charting Language program. The relationship between symptom information and selected acupoints was trained using an artificial neural network (ANN). A total of 11 hidden nodes with the highest average precision score were selected through a tenfold cross-validation. Our ANN model could predict the selected acupoints based on symptom and disease information with an average precision score of 0.865 (precision, 0.911; recall, 0.811). This model is a useful tool for diagnostic classification or pattern recognition and for the prediction and modeling of acupuncture treatment based on clinical data obtained in a real-world setting. The relationship between symptoms and selected acupoints could be systematically characterized through knowledge discovery processes, such as pattern identification.
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Affiliation(s)
- Won-Mo Jung
- Department of Science in Korean Medicine, Graduate School, Kyung Hee University, Seoul, 130-701, Republic of Korea
| | - In-Soo Park
- Acupuncture & Meridian Science Research Center, College of Korean Medicine, Kyung Hee University, Seoul, 130-701, Republic of Korea
| | - Ye-Seul Lee
- Department of Science in Korean Medicine, Graduate School, Kyung Hee University, Seoul, 130-701, Republic of Korea.,Acupuncture & Meridian Science Research Center, College of Korean Medicine, Kyung Hee University, Seoul, 130-701, Republic of Korea
| | - Chang-Eop Kim
- Department of Physiology, College of Korean Medicine, Gachon University, Seoul, 131-120, Republic of Korea
| | - Hyangsook Lee
- Department of Science in Korean Medicine, Graduate School, Kyung Hee University, Seoul, 130-701, Republic of Korea.,Acupuncture & Meridian Science Research Center, College of Korean Medicine, Kyung Hee University, Seoul, 130-701, Republic of Korea
| | - Dae-Hyun Hahm
- Acupuncture & Meridian Science Research Center, College of Korean Medicine, Kyung Hee University, Seoul, 130-701, Republic of Korea.,Department of Physiology, School of Medicine, Kyung Hee University, Seoul, 130-701, Republic of Korea
| | - Hi-Joon Park
- Department of Science in Korean Medicine, Graduate School, Kyung Hee University, Seoul, 130-701, Republic of Korea.,Acupuncture & Meridian Science Research Center, College of Korean Medicine, Kyung Hee University, Seoul, 130-701, Republic of Korea
| | - Bo-Hyoung Jang
- Department of Preventive Medicine, College of Korean Medicine, Kyung Hee University, Seoul, 130-701, Republic of Korea
| | - Younbyoung Chae
- Department of Science in Korean Medicine, Graduate School, Kyung Hee University, Seoul, 130-701, Republic of Korea. .,Acupuncture & Meridian Science Research Center, College of Korean Medicine, Kyung Hee University, Seoul, 130-701, Republic of Korea.
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Salem HA, Caddeo G, McFarlane J, Patel K, Cochrane L, Soria D, Henley M, Lund J. A multicentre integration of a computer-led follow-up of prostate cancer is valid and safe. BJU Int 2018; 122:418-426. [PMID: 29393997 DOI: 10.1111/bju.14157] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
OBJECTIVE To test a computer-led follow-up service for prostate cancer in two UK hospitals; the testing aimed to validate the computer expert system in making clinical decisions according to the individual patient's clinical need with a valid model accurately identify patients with disease recurrence or treatment failure based on their blood test and clinical picture. PATIENTS AND METHODS A clinical-decision support system (CDSS) was developed from European (European Association of Urology) and national (National Institute for Health and Care Excellence) guidelines along with knowledge acquired from Urologists. This model was then applied in two UK hospitals to review patients after prostate cancer treatment. These patients' data (n = 200) were then reviewed by two independent urology consultants (blinded from the CDSS and the other consultant's rating) and the agreement was calculated by kappa statistics for validation. The second endpoint was to verify the system by estimating the system reliability. RESULTS The two individual urology consultants identified 12% and 15% of the patients to have potential disease progression and recommended their referral to urology care. The kappa coefficient for the agreement between the CDSS and the two consultants was 0.81 (P < 0.001) and 0.84 (P < 0.001). The agreement amongst both specialist was also high with k = 0.83 (P < 0.001). The system reliability was estimated on all cases and this demonstrated 100% repeatability of the decisions. CONCLUSION A CDSS follow-up is a valid model for providing safe follow-up for prostate cancer.
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Affiliation(s)
- Hesham A Salem
- Derby Hospital NHS Foundation trust, Derby, UK.,Clinical Sciences Wing, The Medical School, University of Nottingham, Nottingham, UK
| | | | | | | | | | - Daniele Soria
- Department of Computer Science, University of Westminster, London, UK
| | - Mike Henley
- Derby Hospital NHS Foundation trust, Derby, UK
| | - Jonathan Lund
- Clinical Sciences Wing, The Medical School, University of Nottingham, Nottingham, UK
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16
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Ramos-González J, López-Sánchez D, Castellanos-Garzón JA, de Paz JF, Corchado JM. A CBR framework with gradient boosting based feature selection for lung cancer subtype classification. Comput Biol Med 2017; 86:98-106. [PMID: 28527352 DOI: 10.1016/j.compbiomed.2017.05.010] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2017] [Revised: 05/10/2017] [Accepted: 05/10/2017] [Indexed: 11/19/2022]
Abstract
Molecular subtype classification represents a challenging field in lung cancer diagnosis. Although different methods have been proposed for biomarker selection, efficient discrimination between adenocarcinoma and squamous cell carcinoma in clinical practice presents several difficulties, especially when the latter is poorly differentiated. This is an area of growing importance, since certain treatments and other medical decisions are based on molecular and histological features. An urgent need exists for a system and a set of biomarkers that provide an accurate diagnosis. In this paper, a novel Case Based Reasoning framework with gradient boosting based feature selection is proposed and applied to the task of squamous cell carcinoma and adenocarcinoma discrimination, aiming to provide accurate diagnosis with a reduced set of genes. The proposed method was trained and evaluated on two independent datasets to validate its generalization capability. Furthermore, it achieved accuracy rates greater than those of traditional microarray analysis techniques, incorporating the advantages inherent to the Case Based Reasoning methodology (e.g. learning over time, adaptability, interpretability of solutions, etc.).
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Affiliation(s)
- Juan Ramos-González
- Department of Computer Science and Automation, Faculty of Science, University of Salamanca, Plaza de los Caídos, s/n, 37008 Salamanca, Spain.
| | - Daniel López-Sánchez
- Department of Computer Science and Automation, Faculty of Science, University of Salamanca, Plaza de los Caídos, s/n, 37008 Salamanca, Spain.
| | - Jose A Castellanos-Garzón
- Department of Computer Science and Automation, Faculty of Science, University of Salamanca, Plaza de los Caídos, s/n, 37008 Salamanca, Spain
| | - Juan F de Paz
- Department of Computer Science and Automation, Faculty of Science, University of Salamanca, Plaza de los Caídos, s/n, 37008 Salamanca, Spain
| | - Juan M Corchado
- Department of Computer Science and Automation, Faculty of Science, University of Salamanca, Plaza de los Caídos, s/n, 37008 Salamanca, Spain
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17
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Anand D, Pandey B, Pandey DK. Facioscapulohumeral Muscular Dystrophy Diagnosis Using Hierarchical Clustering Algorithm and K-Nearest Neighbor Based Methodology. INTERNATIONAL JOURNAL OF E-HEALTH AND MEDICAL COMMUNICATIONS 2017. [DOI: 10.4018/ijehmc.2017040103] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
The genetic diagnosis of neuromuscular disorder is an active area of research. Microarrays are used to detect the changes in genes for the accurate diagnosis. Unfortunately, the number of genes in gene expression data is very large as compared to number of samples. The number of genes needs to be reduced for correct diagnosis. In the present paper, the authors have made an intelligent integrated model for clustering and diagnosis of neuromuscular diseases. Wilcoxon signed rank test is used to preselect the genes. K-means and hierarchical clustering algorithms with different distance metric are employed to cluster the genes. Three classifiers namely linear discriminant analysis, quadratic discriminant analysis and k-nearest neighbor are used. For the employment of integrated techniques, a balanced facioscapulohumeral muscular dystrophy dataset is taken. A comparative analysis of the above integrated algorithms is presented which demonstrate that the integration of cosine distance metric hierarchical clustering algorithm with k-nearest neighbor has given the best performance measures.
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Affiliation(s)
- Divya Anand
- Department of Computer Science and Engineering, Lovely Professional University, Phagwara, India
| | - Babita Pandey
- Department of Computer Applications, Lovely Professional University, Phagwara, India
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18
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Afzal M, Hussain M, Ali Khan W, Ali T, Lee S, Huh EN, Farooq Ahmad H, Jamshed A, Iqbal H, Irfan M, Abbas Hydari M. Comprehensible knowledge model creation for cancer treatment decision making. Comput Biol Med 2017; 82:119-129. [PMID: 28187294 DOI: 10.1016/j.compbiomed.2017.01.010] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2016] [Revised: 01/17/2017] [Accepted: 01/17/2017] [Indexed: 01/11/2023]
Abstract
BACKGROUND A wealth of clinical data exists in clinical documents in the form of electronic health records (EHRs). This data can be used for developing knowledge-based recommendation systems that can assist clinicians in clinical decision making and education. One of the big hurdles in developing such systems is the lack of automated mechanisms for knowledge acquisition to enable and educate clinicians in informed decision making. MATERIALS AND METHODS An automated knowledge acquisition methodology with a comprehensible knowledge model for cancer treatment (CKM-CT) is proposed. With the CKM-CT, clinical data are acquired automatically from documents. Quality of data is ensured by correcting errors and transforming various formats into a standard data format. Data preprocessing involves dimensionality reduction and missing value imputation. Predictive algorithm selection is performed on the basis of the ranking score of the weighted sum model. The knowledge builder prepares knowledge for knowledge-based services: clinical decisions and education support. RESULTS Data is acquired from 13,788 head and neck cancer (HNC) documents for 3447 patients, including 1526 patients of the oral cavity site. In the data quality task, 160 staging values are corrected. In the preprocessing task, 20 attributes and 106 records are eliminated from the dataset. The Classification and Regression Trees (CRT) algorithm is selected and provides 69.0% classification accuracy in predicting HNC treatment plans, consisting of 11 decision paths that yield 11 decision rules. CONCLUSION Our proposed methodology, CKM-CT, is helpful to find hidden knowledge in clinical documents. In CKM-CT, the prediction models are developed to assist and educate clinicians for informed decision making. The proposed methodology is generalizable to apply to data of other domains such as breast cancer with a similar objective to assist clinicians in decision making and education.
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Affiliation(s)
- Muhammad Afzal
- Department of Computer Science and Engineering, Kyung Hee University, Seocheon-dong, Giheung-gu, South Korea; Department of Software, Sejong University, South Korea.
| | - Maqbool Hussain
- Department of Computer Science and Engineering, Kyung Hee University, Seocheon-dong, Giheung-gu, South Korea; Department of Software, Sejong University, South Korea.
| | - Wajahat Ali Khan
- Department of Computer Science and Engineering, Kyung Hee University, Seocheon-dong, Giheung-gu, South Korea.
| | - Taqdir Ali
- Department of Computer Science and Engineering, Kyung Hee University, Seocheon-dong, Giheung-gu, South Korea.
| | - Sungyoung Lee
- Department of Computer Science and Engineering, Kyung Hee University, Seocheon-dong, Giheung-gu, South Korea.
| | - Eui-Nam Huh
- Department of Computer Science and Engineering, Kyung Hee University, Seocheon-dong, Giheung-gu, South Korea.
| | - Hafiz Farooq Ahmad
- College of Computer Sciences and Information Technology (CCSIT), King Faisal University, Alahsa, Saudi Arabia.
| | - Arif Jamshed
- Shaukat Khanum Memorial Cancer Hospital and Research Center, Lahore, Pakistan.
| | - Hassan Iqbal
- Department of Otolaryngology and Head and Neck Surgery, The Ohio State University, USA.
| | - Muhammad Irfan
- Shaukat Khanum Memorial Cancer Hospital and Research Center, Lahore, Pakistan.
| | - Manzar Abbas Hydari
- Shaukat Khanum Memorial Cancer Hospital and Research Center, Lahore, Pakistan.
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19
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Negm AES, Kandil AH, Hassan OAEF. Decision Support System for Lymphoma Classification. Curr Med Imaging 2017; 13:89-98. [PMID: 28491014 PMCID: PMC5403962 DOI: 10.2174/1573405612666160519124752] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2015] [Revised: 04/07/2016] [Accepted: 04/08/2016] [Indexed: 11/22/2022]
Abstract
The diffuse lymphoma is a malignant tumor of lymphoid tissues. It is associated with abnormal, unlimited and uncontrolled proliferation of lymphoid cells. Until now, expert pathologists have identified diffuse lymphoma cells disease manually. This paper introduces automatic system with a friendly user interface to differentiate between the categories of the diffuse lymphoma cells. This research is based on the morphological features such as size, perimeter and circularity. The cell size is a critical element in the classification of diffuse lymphoma according to international formulation standards. Therefore, the applied procedures identify lymphoid cell population in digital microscopic images. The cells are classified using their morphological data according to the characteristics of each cell such as: circularity, perimeter, area, and color density. The number of cells is taken into consideration in the developed approach. Image processing techniques are applied to digital microscopic images to measure morphological parameters and to overcome image problems such as overlapping and cell distortion that affect the sensitivity of the measured data. The developed procedures help the pathologists to come to a decision regarding the classification of diffuse lymphoma. Moreover, it can be used to train medical students and young pathologists.
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Affiliation(s)
- Ahmed E-S Negm
- Systems and Biomedical Engineering Department, High Institutes of Engineering, Al Shorouk Academy, Al Shorouk city, Cairo, Egypt
| | - Ahmed H Kandil
- Systems and Biomedical Engineering Department, High Institutes of Engineering, Al Shorouk Academy, Al Shorouk city, Cairo, Egypt.,Systems and Biomedical Engineering Department, Faculty of Engineering, Cairo University, Giza, Egypt
| | - Osama A E-F Hassan
- Systems and Biomedical Engineering Department, High Institutes of Engineering, Al Shorouk Academy, Al Shorouk city, Cairo, Egypt.,Professor Doctor Expert of Histopathology and Electron Microscopy Services / Central Medical and Research Laboratories / Egyptian Armed Forces, and International Medical Centre "IMC" Cairo, Egypt
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20
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Bimba AT, Idris N, Al-Hunaiyyan A, Mahmud RB, Abdelaziz A, Khan S, Chang V. Towards knowledge modeling and manipulation technologies: A survey. INTERNATIONAL JOURNAL OF INFORMATION MANAGEMENT 2016. [DOI: 10.1016/j.ijinfomgt.2016.05.022] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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21
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Agharezaei L, Agharezaei Z, Nemati A, Bahaadinbeigy K, Keynia F, Baneshi MR, Iranpour A, Agharezaei M. The Prediction of the Risk Level of Pulmonary Embolism and Deep Vein Thrombosis through Artificial Neural Network. Acta Inform Med 2016; 24:354-359. [PMID: 28077893 PMCID: PMC5203732 DOI: 10.5455/aim.2016.24.354.359] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2016] [Accepted: 09/25/2016] [Indexed: 12/01/2022] Open
Abstract
Background: Venous thromboembolism is a common cause of mortality among hospitalized patients and yet it is preventable through detecting the precipitating factors and a prompt diagnosis by specialists. The present study has been carried out in order to assist specialists in the diagnosis and prediction of the risk level of pulmonary embolism in patients, by means of artificial neural network. Method: A number of 31 risk factors have been used in this study in order to evaluate the conditions of 294 patients hospitalized in 3 educational hospitals affiliated with Kerman University of Medical Sciences. Two types of artificial neural networks, namely Feed-Forward Back Propagation and Elman Back Propagation, were compared in this study. Results: Through an optimized artificial neural network model, an accuracy and risk level index of 93.23 percent was achieved and, subsequently, the results have been compared with those obtained from the perfusion scan of the patients. 86.61 percent of high risk patients diagnosed through perfusion scan diagnostic method were also diagnosed correctly through the method proposed in the present study. Conclusions: The results of this study can be a good resource for physicians, medical assistants, and healthcare staff to diagnose high risk patients more precisely and prevent the mortalities. Additionally, expenses and other unnecessary diagnostic methods such as perfusion scans can be efficiently reduced.
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Affiliation(s)
- Laleh Agharezaei
- Health Services Management Research Center, Institute for Futures Studies in Health, Kerman University of Medical Sciences, Kerman, Iran
| | - Zhila Agharezaei
- Medical Informatics Research Center, Institute for Futures Studies in Health, Kerman University of Medical Sciences, Kerman, Iran
| | - Ali Nemati
- Department of Internal Medicine, School of Medicine, Kerman University of Medical Sciences, Kerman, Iran
| | - Kambiz Bahaadinbeigy
- Research Center for Modeling in Health, Institute for Futures Studies in Health, Kerman University of Medical Sciences, Kerman, Iran
| | - Farshid Keynia
- Department of Power Engineering Graduate, University of Advanced Technology Kerman, Kerman, Iran
| | - Mohammad Reza Baneshi
- Research Center for Modeling in Health, Institute for Futures Studies in Health, Kerman University of Medical Sciences, Kerman, Iran
| | - Abedin Iranpour
- Social Determinants of Health Research Center, Institute for Futures Studies in Health, Kerman University of Medical Sciences, Kerman, Iran
| | - Moslem Agharezaei
- Department of IT and Computer Engineering, Science and Research Branch, Islamic Azad University, Kerman, Iran
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22
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De Backere F, Ongenae F, Van den Abeele F, Nelis J, Bonte P, Clement E, Philpott M, Hoebeke J, Verstichel S, Ackaert A, De Turck F. Towards a social and context-aware multi-sensor fall detection and risk assessment platform. Comput Biol Med 2015; 64:307-20. [DOI: 10.1016/j.compbiomed.2014.12.002] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2014] [Revised: 10/16/2014] [Accepted: 12/01/2014] [Indexed: 02/05/2023]
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23
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Computer-based diagnostic expert systems in rheumatology: where do we stand in 2014? Int J Rheumatol 2014; 2014:672714. [PMID: 25114683 PMCID: PMC4119620 DOI: 10.1155/2014/672714] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2014] [Accepted: 06/20/2014] [Indexed: 01/04/2023] Open
Abstract
Background. The early detection of rheumatic diseases and the treatment to target have become of utmost importance to control the disease and improve its prognosis. However, establishing a diagnosis in early stages is challenging as many diseases initially present with similar symptoms and signs. Expert systems are computer programs designed to support the human decision making and have been developed in almost every field of medicine. Methods. This review focuses on the developments in the field of rheumatology to give a comprehensive insight. Medline, Embase, and Cochrane Library were searched. Results. Reports of 25 expert systems with different design and field of application were found. The performance of 19 of the identified expert systems was evaluated. The proportion of correctly diagnosed cases was between 43.1 and 99.9%. Sensitivity and specificity ranged from 62 to 100 and 88 to 98%, respectively. Conclusions. Promising diagnostic expert systems with moderate to excellent performance were identified. The validation process was in general underappreciated. None of the systems, however, seemed to have succeeded in daily practice. This review identifies optimal characteristics to increase the survival rate of expert systems and may serve as valuable information for future developments in the field.
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24
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Chatzimichail E, Matthaios D, Bouros D, Karakitsos P, Romanidis K, Kakolyris S, Papashinopoulos G, Rigas A. γ -H2AX: A Novel Prognostic Marker in a Prognosis Prediction Model of Patients with Early Operable Non-Small Cell Lung Cancer. Int J Genomics 2014; 2014:160236. [PMID: 24527431 PMCID: PMC3910456 DOI: 10.1155/2014/160236] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2013] [Revised: 11/03/2013] [Accepted: 12/12/2013] [Indexed: 11/18/2022] Open
Abstract
Cancer is a leading cause of death worldwide and the prognostic evaluation of cancer patients is of great importance in medical care. The use of artificial neural networks in prediction problems is well established in human medical literature. The aim of the current study was to assess the prognostic value of a series of clinical and molecular variables with the addition of γ -H2AX-a new DNA damage response marker-for the prediction of prognosis in patients with early operable non-small cell lung cancer by comparing the γ -H2AX-based artificial network prediction model with the corresponding LR one. Two prognostic models of 96 patients with 27 input variables were constructed by using the parameter-increasing method in order to compare the predictive accuracy of neural network and logistic regression models. The quality of the models was evaluated by an independent validation data set of 11 patients. Neural networks outperformed logistic regression in predicting the patient's outcome according to the experimental results. To assess the importance of the two factors p53 and γ -H2AX, models without these two variables were also constructed. JR and accuracy of these models were lower than those of the models using all input variables, suggesting that these biological markers are very important for optimal performance of the models. This study indicates that neural networks may represent a potentially more useful decision support tool than conventional statistical methods for predicting the outcome of patients with non-small cell lung cancer and that some molecular markers, such as γ -H2AX, enhance their predictive ability.
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Affiliation(s)
- E. Chatzimichail
- Department of Electrical and Computer Engineering, Democritus University of Thrace, Xanthi, Greece
| | - D. Matthaios
- Department of Oncology, Democritus University of Thrace, Alexandroupolis, Greece
| | - D. Bouros
- Department of Pneumonology, Democritus University of Thrace, Alexandroupolis, Greece
| | - P. Karakitsos
- Department of Cytopathology, University of Athens Medical School, “Attikon” University Hospital, Athens, Greece
| | - K. Romanidis
- 2nd Department of Surgery, Democritus University of Thrace, Alexandroupolis, Greece
| | - S. Kakolyris
- Department of Oncology, Democritus University of Thrace, Alexandroupolis, Greece
| | - G. Papashinopoulos
- Department of Electrical and Computer Engineering, Democritus University of Thrace, Xanthi, Greece
| | - A. Rigas
- Department of Electrical and Computer Engineering, Democritus University of Thrace, Xanthi, Greece
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25
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Ribas LM, Rocha FT, Ortega NRS, da Rocha AF, Massad E. Brain activity and medical diagnosis: an EEG study. BMC Neurosci 2013; 14:109. [PMID: 24083668 PMCID: PMC3852492 DOI: 10.1186/1471-2202-14-109] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2012] [Accepted: 09/19/2013] [Indexed: 11/16/2022] Open
Abstract
Background Despite new brain imaging techniques that have improved the study of the underlying processes of human decision-making, to the best of our knowledge, there have been very few studies that have attempted to investigate brain activity during medical diagnostic processing. We investigated brain electroencephalography (EEG) activity associated with diagnostic decision-making in the realm of veterinary medicine using X-rays as a fundamental auxiliary test. EEG signals were analysed using Principal Components (PCA) and Logistic Regression Analysis Results The principal component analysis revealed three patterns that accounted for 85% of the total variance in the EEG activity recorded while veterinary doctors read a clinical history, examined an X-ray image pertinent to a medical case, and selected among alternative diagnostic hypotheses. Two of these patterns are proposed to be associated with visual processing and the executive control of the task. The other two patterns are proposed to be related to the reasoning process that occurs during diagnostic decision-making. Conclusions PCA analysis was successful in disclosing the different patterns of brain activity associated with hypothesis triggering and handling (pattern P1); identification uncertainty and prevalence assessment (pattern P3), and hypothesis plausibility calculation (pattern P2); Logistic regression analysis was successful in disclosing the brain activity associated with clinical reasoning success, and together with regression analysis showed that clinical practice reorganizes the neural circuits supporting clinical reasoning.
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Affiliation(s)
- Laila Massad Ribas
- School of Medicine, University of São Paulo and LIM 01-HCMFMUSP, Dr, Arnaldo 455, 01246-903, São Paulo, Brazil.
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26
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Azeez D, Ali MAM, Gan KB, Saiboon I. Comparison of adaptive neuro-fuzzy inference system and artificial neutral networks model to categorize patients in the emergency department. SPRINGERPLUS 2013; 2:416. [PMID: 24052927 PMCID: PMC3776083 DOI: 10.1186/2193-1801-2-416] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/18/2013] [Accepted: 08/15/2013] [Indexed: 11/20/2022]
Abstract
Unexpected disease outbreaks and disasters are becoming primary issues facing our world. The first points of contact either at the disaster scenes or emergency department exposed the frontline workers and medical physicians to the risk of infections. Therefore, there is a persuasive demand for the integration and exploitation of heterogeneous biomedical information to improve clinical practice, medical research and point of care. In this paper, a primary triage model was designed using two different methods: an adaptive neuro-fuzzy inference system (ANFIS) and artificial neural network (ANN).When the patient is presented at the triage counter, the system will capture their vital signs and chief complains beside physiology stat and general appearance of the patient. This data will be managed and analyzed in the data server and the patient's emergency status will be reported immediately. The proposed method will help to reduce the queue time at the triage counter and the emergency physician's burden especially duringdisease outbreak and serious disaster. The models have been built with 2223 data set extracted from the Emergency Department of the Universiti Kebangsaan Malaysia Medical Centre to predict the primary triage category. Multilayer feed forward with one hidden layer having 12 neurons has been used for the ANN architecture. Fuzzy subtractive clustering has been used to find the fuzzy rules for the ANFIS model. The results showed that the RMSE, %RME and the accuracy which evaluated by measuring specificity and sensitivity for binary classificationof the training data were 0.14, 5.7 and 99 respectively for the ANN model and 0.85, 32.00 and 96.00 respectively for the ANFIS model. As for unseen data the root mean square error, percentage the root mean square error and the accuracy for ANN is 0.18, 7.16 and 96.7 respectively, 1.30, 49.84 and 94 respectively for ANFIS model. The ANN model was performed better for both training and unseen data than ANFIS model in term of generalization. It was therefore chosen as the technique to develop the primary triage prediction model. This primary triage model will be combined with the secondary triage prediction model to produce the final triage category as a tool to assist the medical officer in the emergency department.
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Affiliation(s)
- Dhifaf Azeez
- />Department of Emergency Medicine, Jalan Yaacob Latif, Bandar Tun Razak, 56000 Cheras, Kuala Lumpur Malaysia
| | - Mohd Alauddin Mohd Ali
- />Institute of Space Science, Universiti Kebangsaan, Malaysia, Bangi, Malaysia
- />Department of Emergency Medicine, Jalan Yaacob Latif, Bandar Tun Razak, 56000 Cheras, Kuala Lumpur Malaysia
| | - Kok Beng Gan
- />Institute of Space Science, Universiti Kebangsaan, Malaysia, Bangi, Malaysia
| | - Ismail Saiboon
- />Department of Emergency Medicine, Jalan Yaacob Latif, Bandar Tun Razak, 56000 Cheras, Kuala Lumpur Malaysia
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27
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Liao Z, Hannam PM, Xia X, Zhao T. Integration of multi-technology on oil spill emergency preparedness. MARINE POLLUTION BULLETIN 2012; 64:2117-2128. [PMID: 22850189 DOI: 10.1016/j.marpolbul.2012.07.015] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2011] [Revised: 07/01/2012] [Accepted: 07/07/2012] [Indexed: 06/01/2023]
Abstract
This paper focuses on the integration of technologies including Case-Based Reasoning (CBR), Genetic Algorithm (GA) and Artificial Neural Network (ANN) for establishing emergency preparedness for oil spill accidents. In CBR, the Frame method is used to define case representation, and the HEOM (Heterogeneous Euclidean-Overlap Metric) is improved to define the similarity of case properties. In GA, we introduce an Improved Genetic Algorithm (IGA) that achieves case adaptation, in which technologies include the Multi-Parameter Cascade Code method, the Small Section method for generation of an initial population, the Multi-Factor Integrated Fitness Function, and Niche technology for genetic operations including selection, crossover, and mutation. In ANN, a modified back-propagation algorithm is employed to train the algorithm to quickly improve system preparedness. Through the analysis of 32 fabricated oil spill cases, an oil spill emergency preparedness system based on the integration of CBR, GA and ANN is introduced. In particular, the development of ANN is presented and analyzed. The paper also discusses the efficacy of our integration approach.
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Affiliation(s)
- Zhenliang Liao
- Key Laboratory of Yangtze River Water Environment of Ministry of Education, Tongji University, Shanghai, China.
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28
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Sen A, Banerjee A, Sinha AP, Bansal M. Clinical decision support: Converging toward an integrated architecture. J Biomed Inform 2012; 45:1009-17. [PMID: 22789390 DOI: 10.1016/j.jbi.2012.07.001] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2011] [Revised: 06/23/2012] [Accepted: 07/01/2012] [Indexed: 11/30/2022]
Affiliation(s)
- Arun Sen
- Department of Information and Operations Management, Mays Business School, Texas A&M University, College Station, TX 77843, USA.
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Godil SS, Shamim MS, Enam SA, Qidwai U. Fuzzy logic: A "simple" solution for complexities in neurosciences? Surg Neurol Int 2011; 2:24. [PMID: 21541006 PMCID: PMC3050069 DOI: 10.4103/2152-7806.77177] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2010] [Accepted: 01/03/2011] [Indexed: 11/24/2022] Open
Abstract
Background: Fuzzy logic is a multi-valued logic which is similar to human thinking and interpretation. It has the potential of combining human heuristics into computer-assisted decision making, which is applicable to individual patients as it takes into account all the factors and complexities of individuals. Fuzzy logic has been applied in all disciplines of medicine in some form and recently its applicability in neurosciences has also gained momentum. Methods: This review focuses on the use of this concept in various branches of neurosciences including basic neuroscience, neurology, neurosurgery, psychiatry and psychology. Results: The applicability of fuzzy logic is not limited to research related to neuroanatomy, imaging nerve fibers and understanding neurophysiology, but it is also a sensitive and specific tool for interpretation of EEGs, EMGs and MRIs and an effective controller device in intensive care units. It has been used for risk stratification of stroke, diagnosis of different psychiatric illnesses and even planning neurosurgical procedures. Conclusions: In the future, fuzzy logic has the potential of becoming the basis of all clinical decision making and our understanding of neurosciences.
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Affiliation(s)
- Saniya Siraj Godil
- Faculty of Health Sciences, Medical College, Aga Khan University, Karachi, Pakistan
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Usage of Case-Based Reasoning, Neural Network and Adaptive Neuro-Fuzzy Inference System Classification Techniques in Breast Cancer Dataset Classification Diagnosis. J Med Syst 2010; 36:407-14. [PMID: 20703710 DOI: 10.1007/s10916-010-9485-0] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2009] [Accepted: 03/30/2010] [Indexed: 10/19/2022]
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