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Roque JPL, Nunes CM, Schreiner PR, Fausto R. Hydrogen Tunneling Exhibiting Unexpectedly Small Primary Kinetic Isotope Effects. Chemistry 2024:e202401323. [PMID: 38709063 DOI: 10.1002/chem.202401323] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2024] [Revised: 04/29/2024] [Accepted: 05/06/2024] [Indexed: 05/07/2024]
Abstract
Probing quantum mechanical tunneling (QMT) in chemical reactions is crucial to understanding and developing new transformations. Primary H/D kinetic isotopic effects (KIEs) beyond the semiclassical maximum values of 7-10 (room temperature) are commonly used to assess substantial QMT contributions in one-step hydrogen transfer reactions, because of the much greater QMT probability of protium vs. deuterium. Nevertheless, we report here the discovery of a reaction model occurring exclusively by H-atom QMT with residual primary H/D KIEs. 2-Hydroxyphenylnitrene, generated in N2 matrix, was found to isomerize to an imino-ketone via sequential (domino) QMT involving anti to syn OH-rotamerization (rate determining step) and [1,4]-H shift reactions. These sequential QMT transformations were also observed in the OD-deuterated sample, and unexpected primary H/D KIEs between 3 and 4 were measured at 3 to 20 K. Analogous residual primary H/D KIEs were found in the anti to syn OH-rotamerization QMT of 2-cyanophenol in a N2 matrix. Evidence strongly indicates that these intriguing isotope-insensitive QMT reactivities arise due to the solvation effects of the N2 matrix medium, putatively through coupling with the moving H/D tunneling particle. Should a similar scenario be extrapolated to conventional solution conditions, then QMT may have been overlooked in many chemical reactions.
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Affiliation(s)
- José P L Roque
- University of Coimbra, CQC-IMS, Department of Chemistry, 3004-535, Coimbra, Portugal
- Institute of Organic Chemistry, Justus Liebig University, Heinrich-Buff-Ring 17, 35392, Giessen, Germany
| | - Cláudio M Nunes
- University of Coimbra, CQC-IMS, Department of Chemistry, 3004-535, Coimbra, Portugal
| | - Peter R Schreiner
- Institute of Organic Chemistry, Justus Liebig University, Heinrich-Buff-Ring 17, 35392, Giessen, Germany
| | - Rui Fausto
- University of Coimbra, CQC-IMS, Department of Chemistry, 3004-535, Coimbra, Portugal
- Faculty Sciences and Letters, Department of Physics, Istanbul Kultur University, Bakirkoy, Istanbul, 34158, Turkey
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2
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Roque JPL, Rosado MTS, Fausto R, Reva I. Dual Photochemistry of Benzimidazole. J Org Chem 2023; 88:2884-2897. [PMID: 36795993 PMCID: PMC9990075 DOI: 10.1021/acs.joc.2c02560] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/18/2023]
Abstract
Monomers of benzimidazole trapped in an argon matrix at 15 K were characterized by vibrational spectroscopy and identified as 1H-tautomers exclusively. The photochemistry of matrix-isolated 1H-benzimidazole was induced by excitations with a frequency-tunable narrowband UV light and followed spectroscopically. Hitherto unobserved photoproducts were identified as 4H- and 6H-tautomers. Simultaneously, a family of photoproducts bearing the isocyano moiety was identified. Thereby, the photochemistry of benzimidazole was hypothesized to follow two reaction pathways: the fixed-ring and the ring-opening isomerizations. The former reaction channel results in the cleavage of the NH bond and formation of a benzimidazolyl radical and an H-atom. The latter reaction channel involves the cleavage of the five-membered ring and concomitant shift of the H-atom from the CH bond of the imidazole moiety to the neighboring NH group, leading to 2-isocyanoaniline and subsequently to the isocyanoanilinyl radical. The mechanistic analysis of the observed photochemistry suggests that detached H-atoms, in both cases, recombine with the benzimidazolyl or isocyanoanilinyl radicals, predominantly at the positions with the largest spin density (revealed using the natural bond analysis computations). The photochemistry of benzimidazole therefore occupies an intermediate position between the earlier studied prototype cases of indole and benzoxazole, which exhibit exclusively the fixed-ring and the ring-opening photochemistries, respectively.
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Affiliation(s)
- José P L Roque
- CQC-IMS, Department of Chemistry, University of Coimbra, Coimbra 3004-535, Portugal
| | - Mário T S Rosado
- CQC-IMS, Department of Chemistry, University of Coimbra, Coimbra 3004-535, Portugal
| | - Rui Fausto
- CQC-IMS, Department of Chemistry, University of Coimbra, Coimbra 3004-535, Portugal
| | - Igor Reva
- CQC-IMS, Department of Chemistry, University of Coimbra, Coimbra 3004-535, Portugal.,CIEPQPF, Department of Chemical Engineering, University of Coimbra, Coimbra 3030-790, Portugal
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3
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Lopes Jesus AJ, de Lucena Júnior JR, Fausto R, Reva I. Infrared Spectra and Phototransformations of meta-Fluorophenol Isolated in Argon and Nitrogen Matrices. MOLECULES (BASEL, SWITZERLAND) 2022; 27:molecules27238248. [PMID: 36500356 PMCID: PMC9735537 DOI: 10.3390/molecules27238248] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/22/2022] [Revised: 11/18/2022] [Accepted: 11/21/2022] [Indexed: 11/29/2022]
Abstract
Monomers of meta-fluorophenol (mFP) were trapped from the gas phase into cryogenic argon and nitrogen matrices. The estimated relative energies of the two conformers are very close, and in the gas phase they have nearly equal populations. Due to the similarity of their structures (they only differ in the orientation of the OH group), the two conformers have also similar predicted vibrational signatures, which makes the vibrational characterization of the individual rotamers challenging. In the present work, it has been established that in an argon matrix only the most stable trans conformer of mFP exists (the OH group pointing away from the fluorine atom). On the other hand, the IR spectrum of mFP in a nitrogen matrix testifies to the simultaneous presence in this matrix of both the trans conformer and of the higher-energy cis conformer (the OH group pointing toward the fluorine atom), which is stabilized by interaction with the matrix gas host. We found that the exposition of the cryogenic N2 matrix to the Globar source of the infrared spectrometer affects the conformational populations. By collecting experimental spectra, either in the full mid-infrared range or only in the range below 2200 cm-1, we were able to reliably distinguish two sets of experimental bands originating from individual conformers. A comparison of the two sets of experimental bands with computed infrared spectra of the conformers allowed, for the first time, the unequivocal vibrational identification of each of them. The joint implementation of computational vibrational spectroscopy and matrix-isolation infrared spectroscopy proved to be a very accurate method of structural analysis. Some mechanistic insights into conformational isomerism (the quantum tunneling of hydrogen atom and vibrationally-induced conformational transformations) have been addressed. Finally, we also subjected matrix-isolated mFP to irradiations with UV light, and the phototransformations observed in these experiments are also described.
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Affiliation(s)
- A. J. Lopes Jesus
- CQC-IMS, Faculty of Pharmacy, University of Coimbra, 3004-295 Coimbra, Portugal
- Correspondence: (A.J.L.J.); (I.R.)
| | | | - Rui Fausto
- CQC-IMS, Department of Chemistry, University of Coimbra, 3004-535 Coimbra, Portugal
| | - Igor Reva
- CQC-IMS, Department of Chemistry, University of Coimbra, 3004-535 Coimbra, Portugal
- CIEPQPF, Department of Chemical Engineering, University of Coimbra, 3030-790 Coimbra, Portugal
- Correspondence: (A.J.L.J.); (I.R.)
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4
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Nunes CM, Roque JP, Doddipatla S, Wood SA, McMahon RJ, Fausto R. Simultaneous Tunneling Control in Conformer-Specific Reactions. J Am Chem Soc 2022; 144:20866-20874. [PMID: 36321916 PMCID: PMC9776521 DOI: 10.1021/jacs.2c09026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
We present here a new example of chemical reactivity governed by quantum tunneling, which also highlights the limitations of the classical theories. The syn and anti conformers of a triplet 2-formylphenylnitrene, generated in a nitrogen matrix, were found to spontaneously rearrange to the corresponding 2,1-benzisoxazole and imino-ketene, respectively. The kinetics of both transformations were measured at 10 and 20 K and found to be temperature-independent, providing clear evidence of concomitant tunneling reactions (heavy-atom and H-atom). Computations confirm the existence of these tunneling reaction pathways. Although the energy barrier between the nitrene conformers is lower than any of the observed reactions, no conformational interconversion was observed. These results demonstrate an unprecedented case of simultaneous tunneling control in conformer-specific reactions of the same chemical species. The product outcome is impossible to be rationalized by the conventional kinetic or thermodynamic control.
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Affiliation(s)
- Cláudio M. Nunes
- University
of Coimbra, CQC-IMS, Department of Chemistry, 3004-535 Coimbra, Portugal,
| | - José P.
L. Roque
- University
of Coimbra, CQC-IMS, Department of Chemistry, 3004-535 Coimbra, Portugal
| | - Srinivas Doddipatla
- University
of Coimbra, CQC-IMS, Department of Chemistry, 3004-535 Coimbra, Portugal
| | - Samuel A. Wood
- Department
of Chemistry, University of Wisconsin−Madison, Madison, Wisconsin 53706-1322, United States
| | - Robert J. McMahon
- Department
of Chemistry, University of Wisconsin−Madison, Madison, Wisconsin 53706-1322, United States
| | - Rui Fausto
- University
of Coimbra, CQC-IMS, Department of Chemistry, 3004-535 Coimbra, Portugal
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Schleif T, Prado Merini M, Henkel S, Sander W. Solvation Effects on Quantum Tunneling Reactions. Acc Chem Res 2022; 55:2180-2190. [PMID: 35730754 DOI: 10.1021/acs.accounts.2c00151] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
A decisive factor for obtaining high yields and selectivities in organic synthesis is the choice of the proper solvent. Solvent selection is often guided by the intuitive understanding of transition state-solvent interactions. However, quantum-mechanical tunneling can significantly contribute to chemical reactions, circumventing the transition state and thus depriving chemists of their intuitive handle on the reaction kinetics. In this Account, we aim to provide rationales for the effects of solvation on tunneling reactions derived from experiments performed in cryogenic matrices.The tunneling reactions analyzed here cover a broad range of prototypical organic transformations that are subject to strong solvation effects. Examples are the hydrogen tunneling probability for the cis-trans isomerization of formic acid which is strongly reduced upon formation of hydrogen-bonded complexes and the [1,2]H-shift in methylhydroxycarbene where a change in product selectivity is predicted upon interaction with hydrogen bond acceptors.Not only hydrogen but also heavy atom tunneling can exhibit strong solvent effects. The direction of the nearly degenerate valence tautomerization between benzene oxide and oxepin was found to reverse upon formation of a halogen or hydrogen bond with ICF3 or H2O. But even in the absence of strong noncovalent interactions such as hydrogen or halogen bonding, solvation can have a decisive effect on tunneling as evidenced by the Cope rearrangement of semibullvalenes via heavy-atom tunneling. Can quantum tunneling be catalyzed? The acceleration of the ring expansion of 1H-bicyclo[3.1.0.]-hexa-3,5-dien-2-one by complexation with Lewis acids provides a proof-of-concept for tunneling catalysis.Two concepts are central for the explanation and prediction of solvation effects on tunneling phenomena: a simple approach expands the Born-Oppenheimer approximation by separating nuclear degrees of freedom into intra- and intermolecular degrees. Intermolecular movements represent the slowest motions within molecular aggregates, thus effectively freezing the position of the solvent in relation to the reactant during the tunneling process. Another useful approach is to treat reactants and products by separate single-well potentials, where the intersection represents the transition state. Thus, stabilization of the reactants via solvation should result in an increase in barrier heights and widths which in turn lowers tunneling probabilities. These simple models can predict trends in tunneling kinetics and provide a rational basis for controlling tunneling reactions via solvation.
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Affiliation(s)
- Tim Schleif
- Lehrstuhl für Organische Chemie II, Ruhr-Universität Bochum, 44801 Bochum, Germany
| | - Melania Prado Merini
- Lehrstuhl für Organische Chemie II, Ruhr-Universität Bochum, 44801 Bochum, Germany
| | - Stefan Henkel
- Lehrstuhl für Organische Chemie II, Ruhr-Universität Bochum, 44801 Bochum, Germany
| | - Wolfram Sander
- Lehrstuhl für Organische Chemie II, Ruhr-Universität Bochum, 44801 Bochum, Germany
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6
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Roque JPL, Nunes CM, Fausto R. Matrix Isolation in Heterocyclic Chemistry. HETEROCYCLES 2022. [DOI: 10.1002/9783527832002.ch12] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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7
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Nunes CM, Pereira NAM, Fausto R. Photochromism of a Spiropyran in Low-Temperature Matrices: Unprecedented Bidirectional Switching between a Merocyanine and an Allene Intermediate. J Phys Chem A 2022; 126:2222-2233. [PMID: 35362982 DOI: 10.1021/acs.jpca.2c01105] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Photochromism of spiropyrans has attracted much attention due to its potential in many light-controlled system applications. However, several fundamental aspects regarding the structure, energetics, and mechanistic details of the transformations of spiropyrans are still not well understood. Here, we report the study of the photochromism of a 6-hydroxy-spiropyran (HBPS) under conditions of matrix isolation, where monomers of the compound are frozen in a solidified noble gas (krypton, at 15 K). The structure of the matrix-isolated HBPS was first elucidated by infrared (IR) spectroscopy supported by density functional theory computations. Then, the photochromism of HBPS, from the colorless spiropyran to the colored merocyanine, was induced by ultraviolet (UV) irradiation at 310 nm. The analysis of the IR spectrum of the photoproduced species revealed the exclusive formation of the most stable merocyanine MC-TTC stereoisomer. Subsequent visible-light (550 nm) irradiation of MC-TTC generated a new colorless allenic isomeric species ALN, where the UV irradiation (310 nm) of ALN was found to convert this species back to MC-TTC. This constitutes an unprecedented bidirectional transformation between a colored merocyanine and a colorless allene species. The newly observed photoswitching reaction (or photochromism) occurs along an intramolecular hydrogen bond existing in both merocyanine and allenic species, thus suggesting that it might be generally feasible in the chemistry of spiropyrans. On the other hand, the usual assumption that, as a general rule, merocyanines photochemically revert to spiropyrans is not supported in this work.
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Affiliation(s)
- Cláudio M Nunes
- CQC-IMS, Department of Chemistry, University of Coimbra, Coimbra 3004-535, Portugal
| | - Nelson A M Pereira
- CQC-IMS, Department of Chemistry, University of Coimbra, Coimbra 3004-535, Portugal
| | - Rui Fausto
- CQC-IMS, Department of Chemistry, University of Coimbra, Coimbra 3004-535, Portugal
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8
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Fausto R, Ildiz GO, Nunes CM. IR-induced and tunneling reactions in cryogenic matrices: the (incomplete) story of a successful endeavor. Chem Soc Rev 2022; 51:2853-2872. [PMID: 35302145 DOI: 10.1039/d1cs01026c] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
In this article, IR-induced and tunneling-driven reactions observed in cryogenic matrices are described in a historical perspective, the entangling of the two types of processes being highlighted. The story of this still ongoing fascinating scientific endeavor is presented here following closely our own involvement in the field for more than 30 years, and thus focuses mostly on our work. It is, because of this reason, also an incomplete story. Nevertheless, it considers a large range of examples, from very selective IR-induced conformational isomerizations to IR-induced bond-breaking/bond-forming reactions and successful observations of rare heavy atom tunneling processes. As a whole, this article provides a rather general overview of the major progress achieved in the field.
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Affiliation(s)
- Rui Fausto
- CQC-IMS, Department of Chemistry, University of Coimbra, 3004-535 Coimbra, Portugal.
| | - Gulce O Ildiz
- CQC-IMS, Department of Chemistry, University of Coimbra, 3004-535 Coimbra, Portugal. .,Department of Physics, Faculty of Sciences and Letters, Istanbul Kultur University, 34158 Bakirkoy, Istanbul, Turkey
| | - Cláudio M Nunes
- CQC-IMS, Department of Chemistry, University of Coimbra, 3004-535 Coimbra, Portugal.
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9
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Lopes Jesus AJ, Fausto R, Reva I. Conformational Space, IR-Induced, and UV-Induced Chemistry of Carvacrol Isolated in a Low-Temperature Argon Matrix. J Phys Chem A 2021; 125:8215-8229. [PMID: 34506137 DOI: 10.1021/acs.jpca.1c05907] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Abstract
In this work, monomers of carvacrol (5-isopropyl-2-methylphenol), a natural monoterpene exhibiting wide range bioactivity, were trapped in a cryogenic argon matrix and characterized by infrared spectroscopy, while quantum chemical calculations at the B3LYP and MP2 levels were employed to characterize the conformational landscape of the isolated molecule. Four conformers have been localized on the potential energy surface, and the factors accounting for their relative stability were analyzed. The two most stable conformers of carvacrol, differing in the relative orientation of the isopropyl group and both having the OH group pointing away from the vicinal methyl fragment, were identified in the cryomatrix for the first time. The individual spectral signatures of the two conformers were distinguished based on the change in their relative abundance induced by exposing the matrix to broadband infrared light. Matrix-isolated carvacrol was also irradiated with broadband UV light (λ > 200 nm), which resulted in the cleavage of the OH group. Recombination of the released H atom at the ortho- or para-position of the ring resulted in the formation of alkyl-substituted cyclohexadienones. These were found to undergo subsequent valence and open-ring isomerizations, leading, respectively, to the formation of a Dewar isomer and open-chain conjugated ketenes. Decarbonylation of the photoproducts was also observed for longer irradiation times. A mechanistic analysis of the observed photochemical transformations is presented.
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Affiliation(s)
- A J Lopes Jesus
- University of Coimbra, CQC, Faculty of Pharmacy, 3004-295 Coimbra, Portugal
| | - Rui Fausto
- University of Coimbra, CQC, Department of Chemistry, 3004-535 Coimbra, Portugal
| | - Igor Reva
- University of Coimbra, CQC, Department of Chemistry, 3004-535 Coimbra, Portugal.,University of Coimbra, CIEPQPF, Department of Chemical Engineering, 3030-790 Coimbra, Portugal
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10
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M Nunes C, Pereira NAM, Viegas LP, Pinho E Melo TMVD, Fausto R. Inducing molecular reactions by selective vibrational excitation of a remote antenna with near-infrared light. Chem Commun (Camb) 2021; 57:9570-9573. [PMID: 34546241 DOI: 10.1039/d1cc03574f] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We demonstrate here that selective vibrational excitation of a moiety, remotely attached in relation to the molecular reaction site, might offer a generalized strategy for inducing bond-breaking/bond-forming reactions with exquisite precision. As a proof-of-principle, the electrocyclic ring-expansion of a benzazirine to a ketenimine was induced, in a cryogenic matrix, by near-IR light tuned at the overtone stretching frequency of its OH remote antenna. This accomplishment paves the way for harnessing IR vibrational excitation as a tool to guide a variety of molecular structure manipulations in an exceptional highly-selective manner.
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Affiliation(s)
- Cláudio M Nunes
- University of Coimbra, CQC, Department of Chemistry, 3004-535 Coimbra, Portugal.
| | - Nelson A M Pereira
- University of Coimbra, CQC, Department of Chemistry, 3004-535 Coimbra, Portugal.
| | - Luís P Viegas
- University of Coimbra, CQC, Department of Chemistry, 3004-535 Coimbra, Portugal.
| | | | - Rui Fausto
- University of Coimbra, CQC, Department of Chemistry, 3004-535 Coimbra, Portugal.
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11
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Reva I, Jesus AJL, Nunes CM, Roque JPL, Fausto R. UV-Induced Photochemistry of 1,3-Benzoxazole, 2-Isocyanophenol, and 2-Cyanophenol Isolated in Low-Temperature Ar Matrixes. J Org Chem 2021; 86:6126-6137. [PMID: 33872502 DOI: 10.1021/acs.joc.0c02970] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The monomers of 1,3-benzoxazole isolated in a cryogenic argon matrix were characterized by infrared spectroscopy. The photochemistry of matrix-isolated 1,3-benzoxazole, induced by excitation with a frequency-tunable narrowband UV light, was investigated. Irradiation at 233 nm resulted in a nearly quantitative conversion of 1,3-benzoxazole into 2-isocyanophenol. The individual photochemical behavior of the in situ produced 2-isocyanophenol was studied upon excitations at 290 nm, where 1,3-benzoxazole does not react. The photochemistry of isomeric matrix-isolated 2-cyanophenol was also studied. The photoreactions of 2-substituted (cyano- or isocyano-) phenols were found to have many similarities: (i) OH bond cleavage, yielding a 2-substituted (cyano- or isocyano-) phenoxyl radical and an H-atom, (ii) recombination of the detached H-atom, resulting in an oxo tautomer, and (iii) decomposition leading to fulvenone, together with HCN and HNC. In another photoprocess, 2-cyanophenol undergoes a [1,5] H-shift from the hydroxyl group to the cyano group yielding isomeric ketenimine. The analogous [1,5] H-shift from the hydroxyl group to the isocyano group must have also occurred in 2-isocyanophenol; however, the resulting nitrile ylide isomer is kinetically unstable and collapses to benzoxazole. All photoproducts were characterized by comparing their observed infrared spectra with those computed at the B3LYP/6-311++G(d,p) level. The mechanistic analysis of the photochemistry occurring in the family of the title compounds is presented.
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Affiliation(s)
- Igor Reva
- University of Coimbra, CQC, Department of Chemistry, Coimbra 3004-535, Portugal.,University of Coimbra, CIEPQPF, Department of Chemical Engineering, Coimbra 3030-790, Portugal
| | - A J Lopes Jesus
- University of Coimbra, CQC, Faculty of Pharmacy, Coimbra 3004-295, Portugal
| | - Cláudio M Nunes
- University of Coimbra, CQC, Department of Chemistry, Coimbra 3004-535, Portugal
| | - José P L Roque
- University of Coimbra, CQC, Department of Chemistry, Coimbra 3004-535, Portugal
| | - Rui Fausto
- University of Coimbra, CQC, Department of Chemistry, Coimbra 3004-535, Portugal
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12
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Roque JPL, Sharma A, Rosado MTS, Fausto R, Reva I. Vibrationally Induced Conformational Isomerization and Tunneling in Pyrrole-2-Carboxylic Acid. J Phys Chem A 2020; 124:10277-10287. [PMID: 33245233 DOI: 10.1021/acs.jpca.0c09141] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The conformational behavior of carboxylic acids has attracted considerable attention, as it can be used as a gateway for the study of more complex phenomena. Here, we present an experimental and computational study of pyrrole-2-carboxylic acid (PCA) conformational space and the vibrational characterization of the compound by infrared spectroscopy. The possibility of promoting conformational transformations using selective vibrational excitation of the 2ν(OH) and 2ν(NH) stretching overtones is explored. Two conformers, exhibiting the cis configuration of the COOH group (O═C-O-H dihedral angle near 0°) and differing by the orientation of the carboxylic group with respect to the pyrrole ring (i.e., showing either a cis or a trans NCC═O arrangement), were found to coexist initially for the compound isolated in a cryogenic nitrogen matrix, in an 86:14 ratio, and were characterized by infrared spectroscopy. A third conformer, with the COOH group in the trans configuration, was produced, in situ, by narrowband near-infrared (NIR) excitation of the most stable PCA form (with a cis NCC═O moiety). The photogenerated PCA conformer was found to decay back to the most stable PCA form, by H-atom quantum mechanical tunneling, with a characteristic half-life time of ∼10 min in the nitrogen matrix at 10 K. Tunneling rates were theoretically estimated and compared for the observed isomerization of pyrrole-2-carboxylic acid and for the structurally similar furan-2-carboxylic acid. This comparison showcases the effect of small modifications in the potential energy surface and the implications of quantum tunneling for the stability of short-living species.
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Affiliation(s)
- José P L Roque
- CQC, Department of Chemistry, University of Coimbra, Coimbra 3004-535, Portugal
| | - Archna Sharma
- CQC, Department of Chemistry, University of Coimbra, Coimbra 3004-535, Portugal.,Department of Physics, University of Jammu, Jammu 180001, India
| | - Mário T S Rosado
- CQC, Department of Chemistry, University of Coimbra, Coimbra 3004-535, Portugal
| | - Rui Fausto
- CQC, Department of Chemistry, University of Coimbra, Coimbra 3004-535, Portugal
| | - Igor Reva
- CQC, Department of Chemistry, University of Coimbra, Coimbra 3004-535, Portugal
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